HHsearch results for GI: 254780788 and protein with PDBid: 2a1j_B

>2a1j_B DNA excision repair protein ERCC-1; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5

Probab=94.37  E-value=0.03  Score=34.23  Aligned_cols=50  Identities=16%  Similarity=0.269  Sum_probs=41.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             112258884678888773211147775058888776530588999999999
Q gi|254780788|r  362 FMQAINVDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQGR  412 (526)
Q Consensus       362 f~e~LdVDE~iA~~LV~eGf~SiEeIa~a~~eeL~~IeGfdee~a~eL~~r  412 (526)
                      |...-+|....|..|... |.|++++..++.++|.+++|+....|..|++-
T Consensus        34 L~~I~gIGk~~A~~L~~~-F~Si~~l~~As~eeL~~i~GIG~~~A~~I~~~   83 (91)
T 2a1j_B           34 LTTVKSVNKTDSQTLLTT-FGSLEQLIAASREDLALCPGLGPQKARRLFDV   83 (91)
T ss_dssp             HTTSTTCCHHHHHHHHHH-HSSHHHHHSCCHHHHHTSSSCCSHHHHHHHHH
T ss_pred             HCCCCCCCHHHHHHHHHH-HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf             646888599999999999-58829899989997557799699999999999