HHsearch results for GI: 254780788 and protein with PDBid: 2anr_A
>2anr_A Neuro-oncological ventral antigen 1; protein-RNA complex, KH domain, hairpin, RNA-binding protein/RNA complex; HET: 5BU; 1.94A {Homo sapiens} PDB: 2ann_A*
Probab=96.57 E-value=0.0014 Score=43.88 Aligned_cols=96 Identities=16% Similarity=0.239 Sum_probs=63.3
Q ss_pred CCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCC-------------HHHHHHHHCCCC----------C----C-----
Q ss_conf 8127655488621788998627782679955987-------------899999762866----------5----4-----
Q gi|254780788|r 249 DPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPD-------------SATFVINALRPA----------I----V----- 296 (526)
Q Consensus 249 DpVGAcVG~rGsRiq~I~~EL~gEkIDii~ws~d-------------~~~fi~nAl~PA----------~----v----- 296 (526)
+-+|..||.+|+.|+.+.++. |-+|++-.=++. ...-+.+|.... . .
T Consensus 15 ~~~g~IIGk~G~~Ik~i~~~t-g~~I~~~~~~~~~~~~~~~~~~i~G~~~~v~~a~~~i~~~~~~~~~~~~~~~~~~~~~ 93 (178)
T 2anr_A 15 YAAGSIIGKGGQTIVQLQKET-GATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQ 93 (178)
T ss_dssp HHHHHHHCGGGHHHHHHHHHH-CCEEEECCTTCBCTTSSEEEEEEEECHHHHHHHHHHHHHHHTCCCCC-----------
T ss_pred HHHCEEECCCCHHHHHHHHHH-CCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 772417998987799999987-9838744434678875147874034567799999999998765441012334555333
Q ss_pred -CEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECC
Q ss_conf -2489875678799998534221102544278999998616745785522
Q gi|254780788|r 297 -TKVVLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEE 345 (526)
Q Consensus 297 -~~v~~de~~~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~~~~ 345 (526)
.............+.||.++...-|||+|+|++-..+.||-+|++....
T Consensus 94 ~~~~~~~~~~~~~~i~Vp~~~~~~iIG~~G~~I~~i~~~tg~~I~i~~~~ 143 (178)
T 2anr_A 94 PQTTVNPDRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKP 143 (178)
T ss_dssp ------CGGGGEEEEEEEHHHHHHHHCGGGHHHHHHHHHSSCEEEECCCC
T ss_pred CCCCCCCCCCEEEEEEECHHHCCEEECCCCHHHHHHHHHHCCEEEEECCC
T ss_conf 33344556632699998978878278899859999999869889992588