HHsearch results for GI: 254780788 and protein with PDBid: 2bcq_A
>2bcq_A DNA polymerase lambda; misalignment, extrahelical, mutagenesis, mutation, deletion, streisinger, slippage, transferase, lyase/DNA complex; HET: DNA; 1.65A {Homo sapiens} SCOP: a.60.6.1 a.60.12.1 d.218.1.2 PDB: 1xsl_A* 2bcr_A* 2bcs_A* 2bcu_A* 2bcv_A* 2gws_A* 3c5g_A* 3c5f_A* 2pfn_A* 1xsp_A* 1xsn_A* 2pfo_A* 2pfp_A* 2pfq_A* 3hw8_A* 3hwt_A* 1rzt_A* 3hx0_A* 3mdc_A* 3mda_A* ...
Probab=92.43 E-value=0.16 Score=28.88 Aligned_cols=39 Identities=21% Similarity=0.374 Sum_probs=25.1
Q ss_pred CEEEEE-ECCCCCCCCC----CCCHHHHHH--HHHHHCCEEEEEEC
Q ss_conf 879999-8534221102----544278999--99861674578552
Q gi|254780788|r 306 GRIEVI-VPKEQLSLAI----GRRGQNVRL--ASQLTGWTIDIITE 344 (526)
Q Consensus 306 ~~~~v~-v~~~qls~AI----Gk~GqNvrL--as~Ltg~~idi~~~ 344 (526)
.++++. ||.+++..|. |..--|++| -|+=-||+++=..-
T Consensus 247 rrvDl~~~~~~~~~~aLlyfTGSk~~n~~lR~~A~~kG~~Lne~GL 292 (335)
T 2bcq_A 247 RRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL 292 (335)
T ss_dssp EEEEEEECCGGGHHHHHHHHHCCHHHHHHHHHHHHHTTCEECSSCE
T ss_pred CEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 2478997388988888986328799999999999984980441004