HHsearch results for GI: 254780788 and protein with PDBid: 2bx2_L

>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=96.02  E-value=0.032  Score=33.95  Aligned_cols=143  Identities=20%  Similarity=0.300  Sum_probs=88.8

Q ss_pred             HHCCCEEEEEEEECCCC--EEEEEEC-CCEEEEEHHHCCC---------------CCCCCCCCEEEEEEEEECCCCCEEE
Q ss_conf             52083899999840576--3899957-9358744787488---------------7511527669999976113587028
Q gi|254780788|r  136 DKVGEIISGTVKRVEYG--NVIVDLG-NSDGVIRRDETIS---------------RENLRPGDRVKSYIYDVRREQRGPQ  197 (526)
Q Consensus       136 ~r~Geiv~G~V~r~e~~--~iiVdlg-~~ea~Lp~~e~ip---------------~E~~~~Gdrika~i~~V~~~~rgpq  197 (526)
                      ..+|.|..|.|.++.++  ..+||+| +-.|+||.++..|               .+.+++||.+-+=|..=-...|||.
T Consensus        43 ~~vGnIY~GrV~~v~pgl~AAFVdiG~~k~gFL~~~di~~~~~~~~~~~~~~~~I~~~l~~Gq~ilVQV~ke~~~~Kg~~  122 (517)
T 2bx2_L           43 QKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAA  122 (517)
T ss_dssp             CCTTCEEEEEEEEEETTTTEEEEESSSSSCEEEEGGGSCGGGCC-------CCCGGGTCCTTCEEEEEEEECCCTTCCCE
T ss_pred             CCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEHHHCCHHHCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCC
T ss_conf             88798899999423798866999618997148886884845415552224565554407899989999724676777765


Q ss_pred             EE---------------------EECCCH-----HHHHHHHHHHHHHHHCCEEEEEEEECCCCCEE-------------E
Q ss_conf             98---------------------715988-----99999999766777558087856631677503-------------4
Q gi|254780788|r  198 VL---------------------LSRTHP-----QFMVKLFHMEVPEIYNGIVQVKAVSRDPGSRA-------------K  238 (526)
Q Consensus       198 i~---------------------lSRt~p-----~~l~~Lf~~EVPEI~~G~ieIk~iaR~pG~Rs-------------K  238 (526)
                      +.                     .||...     .+.+.|-....|+= -|+ -++..|-....-.             .
T Consensus       123 lT~~Isl~GrylVl~P~~~~i~~sski~~~~er~~l~~~l~~~~~pe~-~G~-IiRT~a~~~~~~~l~~d~~~L~~~w~~  200 (517)
T 2bx2_L          123 LTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEG-MGL-IVRTAGVGKSAEALQWDLSFRLKHWEA  200 (517)
T ss_dssp             EESSCCEECSSEEEETTCTTCCEECTTCC------HHHHHTTSCCCTT-CEE-EECGGGGGCCHHHHHHHHHHHHHHHHH
T ss_pred             EECEEEECCCCEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCC-CEE-EEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             524064078746874578861115044775889999999986358988-438-998755699999999999999999988


Q ss_pred             EEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf             999940899881276554886217889986277826799559878
Q gi|254780788|r  239 LAVFSSDSSIDPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDS  283 (526)
Q Consensus       239 IAV~s~d~~iDpVGAcVG~rGsRiq~I~~EL~gEkIDii~ws~d~  283 (526)
                      |.-.+   .--+..+|+-..++-+..+.+.+-++.++.|.-++..
T Consensus       201 i~~~~---~~~~~P~ll~~~~~~~~r~lrd~~~~~~~~i~vd~~~  242 (517)
T 2bx2_L          201 IKKAA---ESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPK  242 (517)
T ss_dssp             HHHHH---HTSCSCEEEECCCCHHHHHHHHHCCTTEEEEEESCHH
T ss_pred             HHHHH---CCCCCCEEEECCCCHHHHHHHHHCCHHHHCCCCCCHH
T ss_conf             88754---2489863786287499999998636033223367688