HHsearch results for GI: 254780788 and protein with PDBid: 2ckz_B
>2ckz_B C25, DNA-directed RNA polymerase III 25 KD polypeptide; multiprotein complex, nucleotidyltransferase, nuclear protein, hypothetical protein; 3.2A {Saccharomyces cerevisiae}
Probab=94.83 E-value=0.038 Score=33.41 Aligned_cols=61 Identities=18% Similarity=0.213 Sum_probs=47.5
Q ss_pred HHHHHCCCEEEEEEEECCCCEEEEEEC-CCEEEEEHHHCCC----------------CC----CCCCCCEEEEEEEEECC
Q ss_conf 998520838999998405763899957-9358744787488----------------75----11527669999976113
Q gi|254780788|r 133 EFKDKVGEIISGTVKRVEYGNVIVDLG-NSDGVIRRDETIS----------------RE----NLRPGDRVKSYIYDVRR 191 (526)
Q Consensus 133 ef~~r~Geiv~G~V~r~e~~~iiVdlg-~~ea~Lp~~e~ip----------------~E----~~~~Gdrika~i~~V~~ 191 (526)
-|+..+||++.|+|..+..-.++|.++ -.++++-..++.| ++ .|+.||.||+=|..|.-
T Consensus 76 vf~P~~gev~~g~v~~~~~~G~fV~l~~~~~~i~i~~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~Gd~Vr~rV~~v~~ 155 (218)
T 2ckz_B 76 VFKPFLGEIVTGWISKCTAEGIKVSLLGIFDDIFIPQNMLFEGCYYTPEESAWIWPMDEETKLYFDVNEKIRFRIEREVF 155 (218)
T ss_dssp EECCCTTCEEEEEEEEEETTEEEEECTTSCCCEEEETTTSCTTCEEETTTTEEEEECC--CEEEECTTCEEEEEEEEEEE
T ss_pred EECCCCCCEEEEEEEEECCCEEEEECCCCCCEEEECHHHCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEEEEEEE
T ss_conf 60078998999999684465189982588561998666779861313434137860377566398689989999999996
Q ss_pred CC
Q ss_conf 58
Q gi|254780788|r 192 EQ 193 (526)
Q Consensus 192 ~~ 193 (526)
..
T Consensus 156 ~d 157 (218)
T 2ckz_B 156 VD 157 (218)
T ss_dssp CC
T ss_pred EC
T ss_conf 33