HHsearch results for GI: 254780788 and protein with PDBid: 2va8_A
>2va8_A SSO2462, SKI2-type helicase; hydrolase, DNA repair, ATP-binding, nucleotide-binding; 2.30A {Sulfolobus solfataricus}
Probab=95.17 E-value=0.18 Score=28.49 Aligned_cols=53 Identities=26% Similarity=0.302 Sum_probs=44.1
Q ss_pred HHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 6640779998999999987984788965326775212312344432112453343588999999999984122
Q gi|254780788|r 436 ELCSIPGIDSKIKVALGENGIKTMEDLAGCSVDDLLGWSENKGGNIEKFDGFLSSLGTPKDQVESMIIHARYK 508 (526)
Q Consensus 436 ~L~~l~gl~~~~~~~L~e~gIktleDlAels~dEL~~~~~~~~~~~~~~~gil~~~~l~~~~A~~lIM~AR~~ 508 (526)
+|+.++|++...+-+|.++||+|++|+| .+.+++..+ ++...|+++|-+||.-
T Consensus 658 ~L~~i~~v~~~~ar~L~~~g~~s~~~i~-~~~~~~~~~-------------------~~~~~~~~i~~~~~~~ 710 (715)
T 2va8_A 658 ELVQISGVGRKRARLLYNNGIKELGDVV-MNPDKVKNL-------------------LGQKLGEKVVQEAARL 710 (715)
T ss_dssp HHHTSTTCCHHHHHHHHHTTCCSHHHHH-HCHHHHHHH-------------------HCHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHCCCCCHHHHH-CCHHHHHHH-------------------HCHHHHHHHHHHHHHH
T ss_conf 7738899999999999987999999996-699999988-------------------6878999999999998