HHsearch results for GI: 254780788 and protein with PDBid: 2z0s_A
>2z0s_A Probable exosome complex RNA-binding protein 1; alpha/beta protein, cytoplasm, structural genomics, NPPSFA; 3.20A {Aeropyrum pernix} SCOP: b.40.4.5 d.51.1.1
Probab=97.18 E-value=0.012 Score=37.20 Aligned_cols=114 Identities=18% Similarity=0.231 Sum_probs=84.5
Q ss_pred HHHHHHHCCCEEEEEEEECCCCEEEEEECC-CEEEEEHHHC----------CCCCCCCCCCEEEEEEEEECCCCCEEEEE
Q ss_conf 999985208389999984057638999579-3587447874----------88751152766999997611358702898
Q gi|254780788|r 131 YLEFKDKVGEIISGTVKRVEYGNVIVDLGN-SDGVIRRDET----------ISRENLRPGDRVKSYIYDVRREQRGPQVL 199 (526)
Q Consensus 131 ~~ef~~r~Geiv~G~V~r~e~~~iiVdlg~-~ea~Lp~~e~----------ip~E~~~~Gdrika~i~~V~~~~rgpqi~ 199 (526)
...|..++|++|.|.|.++....+.||++. ..|+||..+. -.+..|++||-+.|-|..+.... .+.
T Consensus 59 ~~~y~P~~GD~ViG~V~~v~~~~~~vdI~~~~~a~L~~~~~~~~~~~~~~~~~r~~~~~GD~v~ArV~~v~~~~---~~~ 135 (235)
T 2z0s_A 59 KEIYVPQAGDVVIGLIQSVGIMNWFVDINSPYVAVLSVQDFLGRPFNPAVDDMQSLLKVGDYIKAKVVAFDKTR---SPL 135 (235)
T ss_dssp -CCCCCCTTCCEEEEEEEECSSEEEEECSSSSCEEEEHHHHHTSCCCTTTTCCTTSSCTTCEEEEEEEEECTTS---CEE
T ss_pred CCCEECCCCCEEEEEEEEEECCEEEEECCCCCCEEECHHHCCCCCCCCCCCCCHHHHHHHHEEEEEEEEECCCC---EEE
T ss_conf 77300466999999993870544899838853116147770342321245421244431014389999612665---046
Q ss_pred EECCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 71598899999999766777558087856631677503499994089988127655488621788998627782679955
Q gi|254780788|r 200 LSRTHPQFMVKLFHMEVPEIYNGIVQVKAVSRDPGSRAKLAVFSSDSSIDPVGACVGMRGSRVQAVVTELRDEKIDIVVW 279 (526)
Q Consensus 200 lSRt~p~~l~~Lf~~EVPEI~~G~ieIk~iaR~pG~RsKIAV~s~d~~iDpVGAcVG~rGsRiq~I~~EL~gEkIDii~w 279 (526)
||- |++|..-
T Consensus 136 Lt~----------------------------~~~~~G~------------------------------------------ 145 (235)
T 2z0s_A 136 LTV----------------------------QGEGLGR------------------------------------------ 145 (235)
T ss_dssp EEC----------------------------CSSSCEE------------------------------------------
T ss_pred EEC----------------------------CCCCCCC------------------------------------------
T ss_conf 603----------------------------3445513------------------------------------------
Q ss_pred CCCHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEE
Q ss_conf 98789999976286654248987567879999853422110254427899999861674578
Q gi|254780788|r 280 SPDSATFVINALRPAIVTKVVLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDI 341 (526)
Q Consensus 280 s~d~~~fi~nAl~PA~v~~v~~de~~~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi 341 (526)
-..-..+-||......-||++|-+.+....-|+.+|.|
T Consensus 146 ------------------------L~~G~~~~V~~~~i~~lig~~g~~i~~i~~~~~~~I~v 183 (235)
T 2z0s_A 146 ------------------------IVRGKIVEISPAKVPRVIGRKMSMLKTLEEKTECKIFV 183 (235)
T ss_dssp ------------------------CCSSEEEECCGGGSGGGTCGGGHHHHHHHHHHCCEEEE
T ss_pred ------------------------CCCEEEEECCHHHHHHHCCCCCEEHHHHHHCCCEEEEE
T ss_conf ------------------------78726986087883242058844524265273819999