HHsearch results for GI: 254780788 and protein with PDBid: 3aev_A

>3aev_A Translation initiation factor 2 subunit alpha; proteins-rRNA complex, 16S rRNA, RNA-binding; 2.80A {Pyrococcus horikoshii} PDB: 1yz6_A
Probab=97.95  E-value=0.0001  Score=52.39  Aligned_cols=78  Identities=22%  Similarity=0.321  Sum_probs=64.1

Q ss_pred             HHCCCEEEEEEEECCCCEEEEEEC---CCEEEEEHHHCCC------CCCCCCCCEEEEEEEEECCCCCEEEEEEECCCHH
Q ss_conf             520838999998405763899957---9358744787488------7511527669999976113587028987159889
Q gi|254780788|r  136 DKVGEIISGTVKRVEYGNVIVDLG---NSDGVIRRDETIS------RENLRPGDRVKSYIYDVRREQRGPQVLLSRTHPQ  206 (526)
Q Consensus       136 ~r~Geiv~G~V~r~e~~~iiVdlg---~~ea~Lp~~e~ip------~E~~~~Gdrika~i~~V~~~~rgpqi~lSRt~p~  206 (526)
                      ..+|++|.|+|.++...+++|+|+   +.+|++|.+|.-.      ++.|++|+++.|.|..|+...+.-.+-+-|..++
T Consensus         9 Pe~G~~V~g~V~~I~~~GafV~l~e~~gieGli~~Seis~~~v~~~~~~~k~Gq~v~~kVl~vd~~~~~i~LSlk~v~~~   88 (275)
T 3aev_A            9 PEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHIDLSLRRVTQQ   88 (275)
T ss_dssp             CCTTCEEEEEEEEEETTEEEEEETTSTTCEEEEEGGGSCSSCCSCGGGTCCTTCEEEEEEEEEETTTTEEEEESTTCCHH
T ss_pred             CCCCCEEEEEEEEEECCEEEEEECCCCCCEEEEEHHHCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCEEECCCCCCCC
T ss_conf             99999999999999724189997367994799898987874204988837899989999974257761112024556758


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780788|r  207 FMVKLFH  213 (526)
Q Consensus       207 ~l~~Lf~  213 (526)
                      --....+
T Consensus        89 ~~~~~~~   95 (275)
T 3aev_A           89 QRKAKLQ   95 (275)
T ss_dssp             HHHHHHH
T ss_pred             CHHHHHH
T ss_conf             4888998