HHsearch results for GI: 254780788 and protein with PDBid: 3cdi_A

>3cdi_A Polynucleotide phosphorylase; mRNA turnover, RNAse, RNA degradation, kinase, transferase; 2.60A {Escherichia coli} PDB: 1sro_A
Probab=91.38  E-value=0.03  Score=34.23  Aligned_cols=60  Identities=22%  Similarity=0.255  Sum_probs=43.5

Q ss_pred             HHHHHHHHCCCCCCCEEEE---------------CCC-CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEE
Q ss_conf             8999997628665424898---------------756-78799998534221102544278999998616745785
Q gi|254780788|r  283 SATFVINALRPAIVTKVVL---------------DED-VGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDII  342 (526)
Q Consensus       283 ~~~fi~nAl~PA~v~~v~~---------------de~-~~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~  342 (526)
                      +...+..||.-|+.-+..+               .+. -+...+-+|.+.....||.+|.|+|---.=||-+|||-
T Consensus       521 ~~~il~~al~qA~~gr~~il~~m~~~i~~pr~~~~~~aP~~~~~~i~~~ki~~~IG~gGk~I~~i~e~tg~~idi~  596 (723)
T 3cdi_A          521 TKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIE  596 (723)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCC------------------------------------------------
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHEECCCHHHHHHHHHHHCCEEEEE
T ss_conf             9999999999999999999999997506664333578872799997878855506887088999999889889983