HHsearch results for GI: 254780788 and protein with PDBid: 3h0g_G

>3h0g_G DNA-directed RNA polymerase II subunit RPB7; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=96.30  E-value=0.002  Score=42.76  Aligned_cols=74  Identities=12%  Similarity=0.195  Sum_probs=62.9

Q ss_pred             HHHHCCCEEEEEEEECCCCEEEEEECCCEEEEEHHHCCC----------------CCCCCCCCEEEEEEEEECCCCCEEE
Q ss_conf             985208389999984057638999579358744787488----------------7511527669999976113587028
Q gi|254780788|r  134 FKDKVGEIISGTVKRVEYGNVIVDLGNSDGVIRRDETIS----------------RENLRPGDRVKSYIYDVRREQRGPQ  197 (526)
Q Consensus       134 f~~r~Geiv~G~V~r~e~~~iiVdlg~~ea~Lp~~e~ip----------------~E~~~~Gdrika~i~~V~~~~rgpq  197 (526)
                      |+..+|+++.|+|..+....+++.+|...++.|.....+                +..|+.||.||+-|..|+.+.+.-+
T Consensus        80 f~P~~ge~~~g~V~~i~~~Gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gd~V~vkV~~v~~~~~~i~  159 (172)
T 3h0g_G           80 WRPFRGEVVDAIVTTVNKMGFFANIGPLNVFVSSHLVPPDMKFDPTANPPNYSGEDQVIEKGSNVRLKIVGTRTDATEIF  159 (172)
T ss_dssp             ECCCTTCEEECCCCEEETTEEECCBTTBCCEEEGGGSCTTCCCBSSSSSCBEESSSCEECSSCCEEEEEEEEEESSSCEE
T ss_pred             EECCCCCEEEEEEEEECCCEEEEEECCCEEEEEEECCCCCEEECHHHCEEEECCCCEEECCCCEEEEEEEEEECCCCCCE
T ss_conf             81578989999999982666999950879999601167751895357468863588099899999999999970537728


Q ss_pred             EEEECCCHHH
Q ss_conf             9871598899
Q gi|254780788|r  198 VLLSRTHPQF  207 (526)
Q Consensus       198 i~lSRt~p~~  207 (526)
                      ++.|-..|.|
T Consensus       160 ~igsl~~~~l  169 (172)
T 3h0g_G          160 AIATMKEDYL  169 (172)
T ss_dssp             EEEECCSTTC
T ss_pred             EEEEECCCCC
T ss_conf             9999789877