PSIBLAST alignment of GI: 254780788 and protein with PDB id: 1hh2
gi|16975175|pdb|1HH2|P Chain P, Crystal Structure Of Nusa From Thermotoga Maritima Length = 344
Score = 344 bits (882), Expect = 3e-92, Method: Composition-based stats.
Identities = 140/336 (41%), Positives = 223/336 (66%), Gaps = 1/336 (0%)
Query: 9 LLQIADAVAYEKSIDRDVVLSVMADSIQKAARSLYGTMSDIRVEINPETGDISLFRLLEV 68
LL+ D + EK I ++ V+ ++ ++ A R +G ++ V I+ TG+I +++LLEV
Sbjct: 5 LLEALDQLEEEKGISKEEVIPILEKALVSAYRKNFGNSKNVEVVIDRNTGNIKVYQLLEV 64
Query: 69 VEEVENYTCQISLKVARDRDPSIDIGGVVSDPLPPMDFGRVAVQSAKQVIIQKVREAERD 128
VEEVE+ QISL+ A+ DP ++G +V L +FGR+A Q+AKQV+IQ++RE E++
Sbjct: 65 VEEVEDPATQISLEEAKKIDPLAEVGSIVKKELNVKNFGRIAAQTAKQVLIQRIRELEKE 124
Query: 129 RQYLEFKDKVGEIISGTVKRVEYGNVIVDLGNSDGVIRRDETISRENLRPGDRVKSYIYD 188
+Q+ ++ + G + + V RV + +G + + + E I E ++ GD VK YI D
Sbjct: 125 KQFEKYSELKGTVTTAEVIRVMGEWADIRIGKLETRLPKKEWIPGEEIKAGDLVKVYIID 184
Query: 189 VRREQRGPQVLLSRTHPQFMVKLFHMEVPEIYNGIVQVKAVSRDPGSRAKLAVFSSDSSI 248
V + +GP++L+SR P+F++ L +E+PE+ NGIV++KA++R+PG R K+AV S+D ++
Sbjct: 185 VVKTTKGPKILVSRRVPEFVIGLMKLEIPEVENGIVEIKAIAREPGVRTKVAVASNDPNV 244
Query: 249 DPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDSATFVINALRPAIVTKVVL-DEDVGR 307
DP+GAC+G GSR+ A++ EL+ EK+D++ WS D + NAL PA V +V + D++
Sbjct: 245 DPIGACIGEGGSRIAAILKELKGEKLDVLKWSDDPKQLIANALAPATVIEVEILDKENKA 304
Query: 308 IEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIIT 343
V+VP QLSLAIG+ GQN RLA++LTGW IDI
Sbjct: 305 ARVLVPPTQLSLAIGKGGQNARLAAKLTGWKIDIKP 340