>gnl|CDD|48407 cd02409, KH-II, KH-II (K homology RNA-binding domain, type II). KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins (e.g. ribosomal protein S3), transcription factors (e.g. NusA_K), and post-transcriptional modifiers of mRNA (e.g. hnRNP K). There are two different KH domains that belong to different protein folds, but they share a single KH motif. The KH motif is a beta-alpha-alpha-beta-beta unit that folds into an alpha-beta structure with a three stranded beta-sheet interupted by two contiguous helices. In addition to their KH core domain, KH-II proteins have an N-terminal alpha helical extension while KH-I proteins have a C-terminal alpha helical extension.. Length = 68

 Score = 46.8 bits (111), Expect = 2e-05
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 286 FVINALRPAIVTKVVLDE--DVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTID 340
           F+   L PA ++ V ++   D   I ++V + Q  L IG++GQN+R   +L    + 
Sbjct: 3   FLKKLLAPAGISGVEIERTPDRIEIIIVVARGQPGLVIGKKGQNIRALQKLLQKLLR 59