RPSBLAST alignment of GI: 254780788 and protein with PDBid: 2asb

>2asb_A Transcription elongation protein NUSA; protein-RNA complex, transcription/RNA complex; 1.50A {Mycobacterium tuberculosis} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 PDB: 2atw_A Length = 251
 Score =  258 bits (661), Expect = 2e-69
 Identities = 99/243 (40%), Positives = 141/243 (58%), Gaps = 9/243 (3%)

Query: 133 EFKDKVGEIISGTVKRVEYGN----VIVDLGNSD----GVIRRDETISRENLRPGDRVKS 184
           EF  + GEI++G ++R    N    V+V +G       GVI   E +  E+   G+R++ 
Sbjct: 2   EFSTREGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRC 61

Query: 185 YIYDVRREQRGPQVLLSRTHPQFMVKLFHMEVPEIYNGIVQVKAVSRDPGSRAKLAVFSS 244
           Y+  V R  R P + LSRTHP  + KLF +EVPEI +G V++ AV+R+ G R+K+AV S+
Sbjct: 62  YVVGVTRGAREPLITLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSN 121

Query: 245 DSSIDPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDSATFVINALRPAIVTKVVLDED 304
            + ++  GAC+G  G RV+ V++EL  EKIDI+ +  D A FV NAL PA V  V + + 
Sbjct: 122 VAGLNAKGACIGPMGQRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQ 181

Query: 305 VGR-IEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEEEDSINRQKDFNERTQFFM 363
             R   V+VP  QLSLAIG+ GQN RLA++LTGW IDI  +       Q +         
Sbjct: 182 TARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAXXXXXGQPEPGVSRGMAH 241

Query: 364 QAI 366
             +
Sbjct: 242 DRL 244