BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780789|ref|YP_003065202.1| hypothetical protein
CLIBASIA_03400 [Candidatus Liberibacter asiaticus str. psy62]
         (192 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780789|ref|YP_003065202.1| hypothetical protein CLIBASIA_03400 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040466|gb|ACT57262.1| hypothetical protein CLIBASIA_03400 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 192

 Score =  390 bits (1003), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/192 (100%), Positives = 192/192 (100%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD
Sbjct: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE
Sbjct: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR
Sbjct: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180

Query: 181 ASLNNYGSYAGL 192
           ASLNNYGSYAGL
Sbjct: 181 ASLNNYGSYAGL 192


>gi|315122011|ref|YP_004062500.1| hypothetical protein CKC_01305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495413|gb|ADR52012.1| hypothetical protein CKC_01305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 186

 Score =  280 bits (717), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 134/184 (72%), Positives = 159/184 (86%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           MESTH   SKYEPRIFGD+GL  D+S++IQPVIEEM FR VQ+SLLEE+NL+LQI VERD
Sbjct: 1   MESTHVFCSKYEPRIFGDVGLGQDVSNIIQPVIEEMGFRIVQVSLLEERNLILQILVERD 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G MTL DCEE+S+AISPILDVENIIE HY+LE+SSPGI+RPMVRKSDF RWNGH+VACE
Sbjct: 61  NGTMTLCDCEEVSKAISPILDVENIIEEHYQLEISSPGINRPMVRKSDFERWNGHIVACE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           +  SSGDK+KL+GKI+G S+  FFLEK++   KD    QIA+SFDSLLSA+L++TDELL 
Sbjct: 121 VASSSGDKKKLVGKIVGKSDLDFFLEKKEEDLKDAGVSQIAVSFDSLLSAKLVITDELLC 180

Query: 181 ASLN 184
           ASLN
Sbjct: 181 ASLN 184


>gi|15963989|ref|NP_384342.1| hypothetical protein SMc02911 [Sinorhizobium meliloti 1021]
 gi|307306401|ref|ZP_07586145.1| protein of unknown function DUF150 [Sinorhizobium meliloti BL225C]
 gi|307319288|ref|ZP_07598717.1| protein of unknown function DUF150 [Sinorhizobium meliloti AK83]
 gi|34222989|sp|Q92SW6|RIMP_RHIME RecName: Full=Ribosome maturation factor rimP
 gi|15073165|emb|CAC41673.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306895124|gb|EFN25881.1| protein of unknown function DUF150 [Sinorhizobium meliloti AK83]
 gi|306902243|gb|EFN32840.1| protein of unknown function DUF150 [Sinorhizobium meliloti BL225C]
          Length = 205

 Score =  174 bits (441), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 84/180 (46%), Positives = 121/180 (67%), Gaps = 2/180 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T    +  EPR+  + GL   ++ +I+PV+ +M FR V++ +  +  L LQ+  ER+
Sbjct: 1   MSDTTTAENTNEPRLITETGLDRRVADIIEPVLVDMGFRLVRVRMSGQNGLTLQVMTERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCEE+S+AISP+LDVE+ I+  Y LEVSSPGIDRPMVR+SDF+RW GH+V CE
Sbjct: 61  DGTMTVEDCEEVSKAISPVLDVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +++  GKI+   E GF LE+++    +  E  +AI F +L  ARLI+TDEL+R
Sbjct: 121 TSVMVDGRKRFRGKIVSVDEDGFRLERDQPAYGE--EAAVAIPFTALSEARLILTDELIR 178


>gi|327192407|gb|EGE59367.1| hypothetical protein RHECNPAF_224004 [Rhizobium etli CNPAF512]
          Length = 201

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 125/177 (70%), Gaps = 6/177 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           ++ EPR+  + GL   ++ +I+PV+  M FR +++ +L +  + +Q+  ER+DG MT++D
Sbjct: 9   NELEPRLITETGLDQRLADIIEPVLVGMGFRLIRVRMLNQNGMTMQVMAERNDGTMTVQD 68

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S AISP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +  G++
Sbjct: 69  CEEVSMAISPVLDVEDPIDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSIMIGNR 128

Query: 129 QKLIGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           ++  GKI+     GF LE+++   GE    E +++I F +L  A+LI+TD+L+R +L
Sbjct: 129 KRFRGKIVEADADGFTLERDQIAYGE----EPKVSIPFTALSDAKLILTDDLIRDAL 181


>gi|190889788|ref|YP_001976330.1| hypothetical protein RHECIAT_CH0000156 [Rhizobium etli CIAT 652]
 gi|259586183|sp|B3PXE6|RIMP_RHIE6 RecName: Full=Ribosome maturation factor rimP
 gi|190695067|gb|ACE89152.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 198

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 125/177 (70%), Gaps = 6/177 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           ++ EPR+  + GL   ++ +I+PV+  M FR +++ +L +  + +Q+  ER+DG MT++D
Sbjct: 6   NELEPRLITETGLDQRLADIIEPVLVGMGFRLIRVRMLNQNGMTMQVMAERNDGTMTVQD 65

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S AISP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +  G++
Sbjct: 66  CEEVSMAISPVLDVEDPIDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSIMIGNR 125

Query: 129 QKLIGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           ++  GKI+     GF LE+++   GE    E +++I F +L  A+LI+TD+L+R +L
Sbjct: 126 KRFRGKIVEADADGFTLERDQIAYGE----EPKVSIPFTALSDAKLILTDDLIRDAL 178


>gi|259585712|sp|B9JGT7|RIMP_AGRRK RecName: Full=Ribosome maturation factor rimP
          Length = 198

 Score =  171 bits (432), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 123/174 (70%), Gaps = 6/174 (3%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + GL   I+++I+PVI  M +R V++ L+ +  L LQ+  ER+DG+M ++ CEE
Sbjct: 9   EPRLIVETGLDQRIAAIIEPVIVGMDYRLVRVRLMNQNGLTLQVMAERNDGSMNVQGCEE 68

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RWNGH+V CE  +   ++++ 
Sbjct: 69  ISTAISPVLDVEDPVDKAYHLEVSSPGIDRPMVRKSDFVRWNGHIVKCETSILVDNRKRF 128

Query: 132 IGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            GKI   ++ GF +E+++   GE    E ++ I F +L  A+LI+TD+L+R +L
Sbjct: 129 RGKITDVNDDGFTIERDQVAYGE----EPKVTIPFSTLAEAKLILTDDLIRDAL 178


>gi|222084329|ref|YP_002542858.1| hypothetical protein Arad_0177 [Agrobacterium radiobacter K84]
 gi|221721777|gb|ACM24933.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 246

 Score =  170 bits (431), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 122/172 (70%), Gaps = 2/172 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + GL   I+++I+PVI  M +R V++ L+ +  L LQ+  ER+DG+M ++ CEE
Sbjct: 57  EPRLIVETGLDQRIAAIIEPVIVGMDYRLVRVRLMNQNGLTLQVMAERNDGSMNVQGCEE 116

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RWNGH+V CE  +   ++++ 
Sbjct: 117 ISTAISPVLDVEDPVDKAYHLEVSSPGIDRPMVRKSDFVRWNGHIVKCETSILVDNRKRF 176

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            GKI   ++ GF +E+++    +  E ++ I F +L  A+LI+TD+L+R +L
Sbjct: 177 RGKITDVNDDGFTIERDQVAYGE--EPKVTIPFSTLAEAKLILTDDLIRDAL 226


>gi|86355779|ref|YP_467671.1| hypothetical protein RHE_CH00119 [Rhizobium etli CFN 42]
 gi|123513435|sp|Q2KDZ2|RIMP_RHIEC RecName: Full=Ribosome maturation factor rimP
 gi|86279881|gb|ABC88944.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 198

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 123/177 (69%), Gaps = 6/177 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           ++ EPR+  + GL   ++ +I+PV+  M FR +++ +L +    +Q+  ER+DG MT++D
Sbjct: 6   NELEPRLITETGLDQRLADIIEPVLVGMGFRLIRVRMLNQNGATMQVMAERNDGTMTVQD 65

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S AISP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +  G++
Sbjct: 66  CEEVSMAISPVLDVEDPIDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSIMIGNR 125

Query: 129 QKLIGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           ++  GKI+     GF LE+++   GE    E ++ I F +L  A+LI+TD+L+R +L
Sbjct: 126 KRFRGKIVEADADGFTLERDQVAYGE----EQKVIIPFTALSDAKLILTDDLIRDAL 178


>gi|227824068|ref|YP_002828041.1| hypothetical protein NGR_c35650 [Sinorhizobium fredii NGR234]
 gi|254765072|sp|C3MC63|RIMP_RHISN RecName: Full=Ribosome maturation factor rimP
 gi|227343070|gb|ACP27288.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 205

 Score =  168 bits (426), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/169 (47%), Positives = 118/169 (69%), Gaps = 2/169 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + GL   I+ +I+PV+ +M FR V++ +  +  L LQI  ER+DG MT+ DCE+
Sbjct: 12  EPRLITETGLDRRIADIIEPVLVQMGFRLVRVRMSGQNGLTLQIMTERNDGTMTVEDCED 71

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH++ CE  +    +++ 
Sbjct: 72  VSKAVSPVLDVEDPIDKAYHLEVSSPGIDRPMVRKSDFVRWQGHLMKCETSIMVDGRKRF 131

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
            GKI+   E GF LE+++    +  E  +AI F +L  ARLI+TD+L+R
Sbjct: 132 RGKIVSVDEEGFRLERDQPAYGE--EAVVAIPFTALSDARLILTDDLIR 178


>gi|241207072|ref|YP_002978168.1| hypothetical protein Rleg_4390 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860962|gb|ACS58629.1| protein of unknown function DUF150 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 201

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 123/177 (69%), Gaps = 6/177 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           ++ EPR+  + GL   ++ +I+PV+ ++ FR +++ ++ +    +Q+  ERDDG MT++D
Sbjct: 9   NEREPRLITETGLDQRLADIIEPVLVDLGFRLIRVRMMNQNGATMQVMAERDDGTMTVQD 68

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +   ++
Sbjct: 69  CEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSILIDNR 128

Query: 129 QKLIGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           ++  GKI+     GF LE+++   GE    E ++ I F +L  A+LI+TD+L+R +L
Sbjct: 129 KRFRGKIVEAGTDGFTLERDQIAYGE----EQKVTIPFTALSDAKLILTDDLIRDAL 181


>gi|150398624|ref|YP_001329091.1| hypothetical protein Smed_3438 [Sinorhizobium medicae WSM419]
 gi|166990840|sp|A6UF26|RIMP_SINMW RecName: Full=Ribosome maturation factor rimP
 gi|150030139|gb|ABR62256.1| protein of unknown function DUF150 [Sinorhizobium medicae WSM419]
          Length = 205

 Score =  167 bits (423), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 120/180 (66%), Gaps = 2/180 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T    +  EPR+  + GL   ++ +I+PV+ ++ FR V++ +  +  L LQ+  ER+
Sbjct: 1   MSDTTTAENANEPRLITETGLDRRVADIIEPVLVDLGFRLVRVRMSGQNGLTLQVMTERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCEE+S+AISP+LDVE+ I+  Y LEVSSPGIDRPMVR+SDF+RW GH++ CE
Sbjct: 61  DGTMTVEDCEEVSKAISPVLDVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLLKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +++  GKI+   E GF LE+++    +  E  + I F +L  ARLI+TDEL+R
Sbjct: 121 TSVLVEGRKRFRGKIVSVDEDGFRLERDQPAYGE--EAGVTIPFTALSEARLILTDELIR 178


>gi|116249894|ref|YP_765732.1| hypothetical protein RL0128 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|166977860|sp|Q1MN36|RIMP_RHIL3 RecName: Full=Ribosome maturation factor rimP
 gi|115254542|emb|CAK05616.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 201

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 123/177 (69%), Gaps = 6/177 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           ++ EPR+  + GL   ++ +I+PV+ ++ FR +++ ++ +    +Q+  ER+DG MT++D
Sbjct: 9   NEREPRLITETGLDQRLADIIEPVLVDLGFRLIRVRMMNQNGATMQVMAERNDGTMTVQD 68

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +   ++
Sbjct: 69  CEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSILIDNR 128

Query: 129 QKLIGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           ++  GKI+     GF LE+++   GE    E ++ I F +L  A+LI+TD+L+R +L
Sbjct: 129 KRFRGKIVEAGTDGFTLERDQIAYGE----EQKVTIPFTALSDAKLILTDDLIRDAL 181


>gi|319406548|emb|CBI80190.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 225

 Score =  164 bits (416), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 118/172 (68%), Gaps = 2/172 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+F + G+A  +S++I P+++ + FR V+  LL    L LQI VER +G MT+ DCE 
Sbjct: 29  EPRLFEEDGVAARVSALIIPLLKPLGFRLVRTKLLGLNGLTLQIMVERTNGTMTIEDCEI 88

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A++P+LDVENIIE  Y LEVSSPGIDRP+VRKSDF+ W GH+   E       +QKL
Sbjct: 89  VSRAVAPLLDVENIIERKYHLEVSSPGIDRPLVRKSDFIHWQGHLAKIETSTIIDGRQKL 148

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            GK+   ++ GF L  EK   ++  ++ + ISF ++ +A LI+TDEL+R +L
Sbjct: 149 RGKLKDITQNGFTLNIEKTAHRE--KVNVFISFSNITNAHLILTDELIRDTL 198


>gi|209551641|ref|YP_002283558.1| hypothetical protein Rleg2_4070 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226706118|sp|B5ZW32|RIMP_RHILW RecName: Full=Ribosome maturation factor rimP
 gi|209537397|gb|ACI57332.1| protein of unknown function DUF150 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 201

 Score =  164 bits (415), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 123/177 (69%), Gaps = 6/177 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           ++ EPR+  + GL   ++ +I+PV+  + FR +++ +L +  + +Q+  ER+DG MT++D
Sbjct: 9   NELEPRLITETGLDQRLADIIEPVLIGIGFRLIRVRMLNQNGVTMQVMAERNDGTMTVQD 68

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +   ++
Sbjct: 69  CEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSILIDNR 128

Query: 129 QKLIGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           ++  GKI+     GF LE+++   GE    E ++ I F +L  A+LI+TD+L+R +L
Sbjct: 129 KRFRGKIVEAGVDGFTLERDQVAYGE----EQKVTIPFTALSDAKLILTDDLIRDAL 181


>gi|319898340|ref|YP_004158433.1| hypothetical protein BARCL_0162 [Bartonella clarridgeiae 73]
 gi|319402304|emb|CBI75843.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 207

 Score =  163 bits (413), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 118/178 (66%), Gaps = 3/178 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+F + G+A  ++++I P+++ + FR V+I LL    L LQI  ER +G MT+ DCE 
Sbjct: 32  EPRLFEEDGIAARVAALIAPLLKPLGFRLVRIKLLGLNGLTLQIMAERANGTMTIEDCET 91

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ ++P+LD+ENIIE  Y LE+SSPGIDRP+VRKSDF  W GH+   E   +   +QK 
Sbjct: 92  VSRTVAPLLDIENIIERKYHLEISSPGIDRPLVRKSDFFHWQGHLAKIETSTAINGRQKF 151

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL-NNYGS 188
            GK++  ++ GF L  +K    D  E+   ISF ++ +A L++TDEL+R +L  NY +
Sbjct: 152 RGKLINVAQNGFTLNIDKTA--DGEEMHEFISFSNITNAHLVLTDELIRDTLKKNYNN 207


>gi|222147146|ref|YP_002548103.1| hypothetical protein Avi_0164 [Agrobacterium vitis S4]
 gi|259585691|sp|B9JYK3|RIMP_AGRVS RecName: Full=Ribosome maturation factor rimP
 gi|221734136|gb|ACM35099.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 204

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 116/172 (67%), Gaps = 2/172 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + GL   I+ +I+PVI E+ F  V++ +L +  + LQI  ER DG MT+ DCEE
Sbjct: 12  EPRLITETGLDRRIADIIEPVIVELGFELVRVRILNQNGMTLQIMAERKDGTMTVEDCEE 71

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           LS AISP+LDVE+ ++  Y LEVSSPGIDRPMVR SDF RW G+++ CE  +   ++++ 
Sbjct: 72  LSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRASDFTRWQGNLLKCETSILIDNRKRF 131

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            GKI   +  GF LE+++    +  E ++ I F +L  A+LI+TD+L+R +L
Sbjct: 132 RGKIADVTPDGFILERDQVAYGE--EPRLTIPFTALAEAKLILTDDLVRDAL 181


>gi|319405102|emb|CBI78706.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 207

 Score =  161 bits (408), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 116/180 (64%), Gaps = 2/180 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+F + G+A  +S++I P+++ + F  +   LL    L LQI VER +G MT++DCE 
Sbjct: 29  EPRLFEEDGVAARVSALIIPLLKPLGFHLICTKLLSLNGLTLQIMVERTNGTMTIKDCEI 88

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ ++P+LD+ENIIE  Y LEVSSPGIDRP+VRKSDF  W GH+   E       +QK 
Sbjct: 89  VSRTVAPLLDIENIIERKYHLEVSSPGIDRPLVRKSDFFHWQGHLAKIETSTIIDGRQKF 148

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            GK+   +++GF L  EK  +++  E  I I F ++ +ARLI+TDEL+R +L      A 
Sbjct: 149 RGKLTDITQSGFTLNIEKTADRE--EANIFIPFSNITNARLILTDELIRDTLKKNKDCAN 206


>gi|319403632|emb|CBI77217.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 225

 Score =  160 bits (406), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 117/172 (68%), Gaps = 2/172 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+F + G+A  +S++I P+++ + FR V+  LL    L LQI VER +G MT+ DCE 
Sbjct: 29  EPRLFEEDGVAARVSALIIPLLKPLGFRLVRTKLLGLNGLTLQIMVERTNGTMTIEDCEI 88

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A++P+LD+EN+IE  Y LE+SSPGIDR +VRKSDF+ W GH+   E       +QKL
Sbjct: 89  VSRAVAPLLDIENVIERKYHLEISSPGIDRLLVRKSDFVHWQGHLAKIETNTVIDGRQKL 148

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            GK+   ++ GF L  EK   ++  E+ I ISF ++ +A LI+TDEL+R +L
Sbjct: 149 RGKLKDITQNGFTLNIEKTAHRE--EINIFISFSNITNAHLILTDELIRDTL 198


>gi|163757747|ref|ZP_02164836.1| hypothetical protein HPDFL43_20092 [Hoeflea phototrophica DFL-43]
 gi|162285249|gb|EDQ35531.1| hypothetical protein HPDFL43_20092 [Hoeflea phototrophica DFL-43]
          Length = 205

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 117/182 (64%), Gaps = 6/182 (3%)

Query: 4   THFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN 63
           T    S YEPR+  + G+   I+ +++PV+  +  R V++ L  +  L LQI  ER DG 
Sbjct: 2   TDNAASAYEPRLVTETGVDARIAEIVEPVLASIDMRLVRVRLSGQNGLTLQIMAERTDGT 61

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           MT+ DCE  S+A+SP+LDVE+ +E  Y LE+SSPGIDRP+VRKSDF RW GH+  C+  +
Sbjct: 62  MTVEDCEAASRALSPVLDVEDPVEKAYHLEISSPGIDRPLVRKSDFERWQGHLARCDASV 121

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKR--GEKDMNELQIAISFDSLLSARLIVTDELLRA 181
               +++  G I   S+TGF +E+++   GE++  E    I F +L  A+L++TDEL+R 
Sbjct: 122 LINGRKRFRGFIRDVSDTGFIVERDQPVYGEENRAE----IPFSALAEAKLVLTDELIRE 177

Query: 182 SL 183
           SL
Sbjct: 178 SL 179


>gi|49475030|ref|YP_033071.1| hypothetical protein BH02180 [Bartonella henselae str. Houston-1]
 gi|51316602|sp|Q6G4W4|RIMP_BARHE RecName: Full=Ribosome maturation factor rimP
 gi|49237835|emb|CAF27030.1| hypothetical protein BH02180 [Bartonella henselae str. Houston-1]
          Length = 216

 Score =  157 bits (397), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 116/183 (63%), Gaps = 2/183 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T  +    EPR+F + G+   I++ + P+++ + FR V++ LL    L LQI VER 
Sbjct: 9   MSKTERISDIDEPRLFEENGVEAHIAAFVMPLLKPLGFRLVRVKLLGLNGLTLQIMVERP 68

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE +S+ +SP+LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 69  DGSMTVEDCETVSRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHIAKIE 128

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    ++K  G +   ++ GF L  +K    +   + I+I FD ++ A L++TDEL+R
Sbjct: 129 TKIILEGRRKFRGTLTNITQDGFTLNTDKAAYGE--SMYISIPFDDIIDAHLVLTDELIR 186

Query: 181 ASL 183
            +L
Sbjct: 187 DAL 189


>gi|49473873|ref|YP_031915.1| hypothetical protein BQ02060 [Bartonella quintana str. Toulouse]
 gi|51316597|sp|Q6G0N9|RIMP_BARQU RecName: Full=Ribosome maturation factor rimP
 gi|49239376|emb|CAF25709.1| hypothetical protein BQ02060 [Bartonella quintana str. Toulouse]
          Length = 216

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 119/183 (65%), Gaps = 2/183 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T  ++   EPR+F + G+   +++++ P+++ + FR V++ LL +  L LQI VER 
Sbjct: 9   MRKTEKMNDIDEPRLFEETGIEAFVAALVIPLLKPLDFRLVRVKLLGQNGLTLQIMVERA 68

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE +S+ +S +LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 69  DGSMTIEDCETVSRTVSHLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHIAKIE 128

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             ++   ++K  G +   ++ G  L  +K    +   + IAI FD+++ A L++TDEL+R
Sbjct: 129 TKITIDGRKKFRGILANITQEGLTLNTDKAAYGEA--MYIAIPFDNIIDAHLVLTDELIR 186

Query: 181 ASL 183
            +L
Sbjct: 187 NAL 189


>gi|240849884|ref|YP_002971272.1| hypothetical protein Bgr_02280 [Bartonella grahamii as4aup]
 gi|240267007|gb|ACS50595.1| hypothetical protein Bgr_02280 [Bartonella grahamii as4aup]
          Length = 216

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 115/172 (66%), Gaps = 2/172 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+F + G+   +++++ P+++ + FR V++ LL +  L LQI VER DG+MT+ DCE 
Sbjct: 20  EPRLFEEDGIEAQVAALVIPLLKPLGFRLVRVKLLGQNGLTLQIMVERADGSMTVEDCET 79

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +SP+LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E  ++   ++K 
Sbjct: 80  VSRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHLAKIETKITIDGRRKF 139

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            G +   ++ GF L  +K    +   +   ISF  +++A L++TDEL+R +L
Sbjct: 140 RGTLTNITQDGFILNTDKAAYGEA--MYTPISFCDIINAHLVLTDELIRDAL 189


>gi|163867514|ref|YP_001608713.1| hypothetical protein Btr_0242 [Bartonella tribocorum CIP 105476]
 gi|259585727|sp|A9IMU4|RIMP_BART1 RecName: Full=Ribosome maturation factor rimP
 gi|161017160|emb|CAK00718.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 208

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 115/172 (66%), Gaps = 2/172 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+F + G+   +++++ P+++ + FR V++ LL +  L LQI VER DG++T+ DCE 
Sbjct: 12  EPRLFEEDGIEARVAALVIPLLKPLGFRLVRVKLLGQNGLTLQIMVERADGSLTVEDCET 71

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +SP+LDVEN+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E  ++   ++K 
Sbjct: 72  VSRTVSPLLDVENVIERKYHLEISSPGIDRPLVRKSDFFHWQGHLAKIETKITIDGRRKF 131

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            G +   ++ GF L  +K    +   +  +ISF  ++ A L++TDEL+R +L
Sbjct: 132 RGTLTNITQDGFILNADKAAYGEA--MYTSISFCDIIGAHLVLTDELIRDAL 181


>gi|260461983|ref|ZP_05810228.1| protein of unknown function DUF150 [Mesorhizobium opportunistum
           WSM2075]
 gi|259032230|gb|EEW33496.1| protein of unknown function DUF150 [Mesorhizobium opportunistum
           WSM2075]
          Length = 215

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 116/179 (64%), Gaps = 2/179 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           + S+ + RI  + G+   I+ +IQPV+  + FR V++ L  +  L LQI  ER+DG MT+
Sbjct: 4   MTSEGDDRIIRESGIDARIALIIQPVLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTMTV 63

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DCEE+S+A+SP LDV++ IE  Y LEVSSPGIDRP+VRKSDF+ W GH+V  E  +   
Sbjct: 64  EDCEEVSRAVSPALDVDDPIEKAYHLEVSSPGIDRPLVRKSDFVTWTGHLVKMETSVVVA 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           D+++  GKI    E    +E++K    +  E  + + +D++   RLI+TD+L+R +L+ 
Sbjct: 124 DRKRFKGKIAEAGENDVLIERDKAAYGE--EPTVRVPYDAISETRLILTDDLIRDALSK 180


>gi|325291534|ref|YP_004277398.1| hypothetical protein AGROH133_02929 [Agrobacterium sp. H13-3]
 gi|325059387|gb|ADY63078.1| hypothetical protein AGROH133_02929 [Agrobacterium sp. H13-3]
          Length = 198

 Score =  154 bits (388), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 113/173 (65%), Gaps = 2/173 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
           +EPR+  + G+   I+ +I+PV+  M +  V++ L  +  + LQ+  ER+DG MT+  CE
Sbjct: 6   HEPRLITETGIDQRIAEIIEPVLTGMGYLLVRVRLSNQNGMTLQVMAEREDGTMTVEGCE 65

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF RW GH+V  E  +   ++++
Sbjct: 66  AVSMAISPVLDVEDPVDKAYHLEVSSPGIDRPMVRKSDFTRWQGHLVKAETSILVENRKR 125

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
             GKI+     GF LE+++    D  E  + I F +L  A+LI+TD+L+R +L
Sbjct: 126 FRGKIVEVDADGFKLERDQIAYGD--EPTVTIPFSALSDAKLILTDDLIRDAL 176


>gi|13474626|ref|NP_106195.1| hypothetical protein mlr5550 [Mesorhizobium loti MAFF303099]
 gi|34223133|sp|Q98BJ1|RIMP_RHILO RecName: Full=Ribosome maturation factor rimP
 gi|14025380|dbj|BAB51981.1| mlr5550 [Mesorhizobium loti MAFF303099]
          Length = 215

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 115/177 (64%), Gaps = 2/177 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S+ + RI  + G+   I+ ++QPV+  + FR V++ L  +  L LQI  ER+DG MT+ D
Sbjct: 6   SEGDDRIIRESGIDARIALIVQPVLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTMTVED 65

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S+A+SP LDV++ IE  Y LEVSSPGIDRP+VRKSDF+ W GH+V  E  +   D+
Sbjct: 66  CEEVSRAVSPALDVDDPIEKAYHLEVSSPGIDRPLVRKSDFVTWTGHLVKMETSVIVADR 125

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           ++  GKI    E    +E++K    +  E  + + +D++   RLI+TD+L+R +L+ 
Sbjct: 126 KRFKGKIAEAGENDVLIERDKAAYGE--EPTVRVPYDAIAETRLILTDDLIRDALSK 180


>gi|319408014|emb|CBI81668.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 211

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 116/183 (63%), Gaps = 2/183 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           +  T  +++  EPR+F + G+ G +++++ P+++ +S+R +++       L LQI  ER 
Sbjct: 4   INETETINNIDEPRLFKEDGIEGRVAALVSPLLKPLSYRLIRVKFSGLNGLTLQIMAERT 63

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCE +S+ +SP LDV+NIIE  Y LE+SSPGIDRP+VRKSDF +W GHV   E
Sbjct: 64  DGTMTIEDCEIISRTVSPFLDVQNIIERKYHLEISSPGIDRPLVRKSDFFKWQGHVAKIE 123

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +QK  G +   ++  F L  +K    ++ +  + I F  + +ARL++TDEL+R
Sbjct: 124 TGVVINGRQKFRGTLTNITQNSFTLNTDKASHGEIAD--VLIPFADVTNARLVLTDELIR 181

Query: 181 ASL 183
            +L
Sbjct: 182 DAL 184


>gi|319779772|ref|YP_004139248.1| hypothetical protein Mesci_0023 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317165660|gb|ADV09198.1| protein of unknown function DUF150 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 214

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S+ + RI  + G+   I+ ++QPV+  + FR V++ L  +  L LQI  ER+DG MT+ D
Sbjct: 6   SEGDDRIIRESGIDARIALIVQPVLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTMTVED 65

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S+A+SP LDV++ IE  Y LEVSSPGIDRP+VRKSDF  W GH+V  E  +   D+
Sbjct: 66  CEEVSRAVSPALDVDDPIEKAYHLEVSSPGIDRPLVRKSDFTTWTGHLVKMETSIVVADR 125

Query: 129 QKLIGKIMGTSETGFFLEKEKR--GEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           ++  GKI    E    +E++K   GE    E  + + +D++   RLI+TD+L+R +L+ 
Sbjct: 126 KRFKGKIAEAGEDDVLIERDKAAYGE----EPTVRVPYDAIADVRLILTDDLIRDALSK 180


>gi|15887444|ref|NP_353125.1| hypothetical protein Atu0090 [Agrobacterium tumefaciens str. C58]
 gi|34222929|sp|Q8UJ48|RIMP_AGRT5 RecName: Full=Ribosome maturation factor rimP
 gi|15154957|gb|AAK85910.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 198

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 115/177 (64%), Gaps = 6/177 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           +  EPR+  + G+   I+ +I+PV+  M +  V++ L  +  + LQ+  ER+DG M ++D
Sbjct: 4   TAQEPRLITETGIDQRIAEIIEPVLTGMGYLLVRVRLSNQNGMTLQVMAEREDGTMNVQD 63

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S AISP+LDVE+ +E  Y LEVSSPGIDRPMVRK+DF RW GH+V  E  +   ++
Sbjct: 64  CEAISMAISPVLDVEDPVEKAYHLEVSSPGIDRPMVRKTDFTRWQGHLVKVETSILVENR 123

Query: 129 QKLIGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           ++  GKI+      F LE+++   GE    E  + + F++L  A+LI+TD+L+R +L
Sbjct: 124 KRFRGKIVEVDADSFKLERDQIAYGE----EPTVVVPFNALSDAKLILTDDLIRDAL 176


>gi|121601902|ref|YP_989500.1| hypothetical protein BARBAKC583_1251 [Bartonella bacilliformis
           KC583]
 gi|259585726|sp|A1UU47|RIMP_BARBK RecName: Full=Ribosome maturation factor rimP
 gi|120614079|gb|ABM44680.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
          Length = 209

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 113/183 (61%), Gaps = 4/183 (2%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           + +T  +    EPR+F + G+   + +++ P+++ + +R V++ LL    L LQI  ER 
Sbjct: 4   INATEIMDDIDEPRLFEEDGVEALVVALVAPLLKPLGYRLVRVKLLGLNGLTLQIMAERA 63

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCE +S+ ISP+LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W G+    E
Sbjct: 64  DGTMTIEDCEIISKTISPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGYTAKIE 123

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  ++K  G +   ++ GF L  +   E++     + +SF ++ +A L++TD+L+R
Sbjct: 124 TRTIVNGRRKFRGALENVTQDGFILNIDAAPEEET----VYVSFSNITNAHLVLTDKLIR 179

Query: 181 ASL 183
            +L
Sbjct: 180 DAL 182


>gi|118590497|ref|ZP_01547899.1| hypothetical protein SIAM614_02941 [Stappia aggregata IAM 12614]
 gi|118436960|gb|EAV43599.1| hypothetical protein SIAM614_02941 [Stappia aggregata IAM 12614]
          Length = 197

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 113/179 (63%), Gaps = 8/179 (4%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S +EPRI  + GL   ++++++PVIE++ +R V+  +  +    LQI  ER DG MT+ D
Sbjct: 2   SAHEPRIVTEQGLDARVAAIVEPVIEDLGYRLVRTKISAQNGCTLQIMAERPDGTMTVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP LDVE+ I   Y LEVSSPGIDRP+VR  DF RW GH +  E+ +    +
Sbjct: 62  CETVSRAVSPALDVEDPINRAYHLEVSSPGIDRPLVRAGDFNRWAGHELKVEMAVMLDGR 121

Query: 129 QKLIGKIMGTSETGFF---LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           ++  G ++G +E G     L   + GE+D     +A+  +++  A+L++TD+L+ A+L 
Sbjct: 122 KRFRGTLLG-AENGMASIRLPDVREGEEDT----VALPLENIGEAKLVLTDDLITAALQ 175


>gi|92115661|ref|YP_575390.1| hypothetical protein Nham_0028 [Nitrobacter hamburgensis X14]
 gi|122418985|sp|Q1QS67|RIMP_NITHX RecName: Full=Ribosome maturation factor rimP
 gi|91798555|gb|ABE60930.1| protein of unknown function DUF150 [Nitrobacter hamburgensis X14]
          Length = 263

 Score =  140 bits (353), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 113/174 (64%), Gaps = 2/174 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  +SSV+ PV++ M +R V+I +  E    +QI  ER DG+M + DCE 
Sbjct: 16  EPRLVVEPGVAARVSSVVAPVLQGMGYRLVRIKVSGEYGCTVQIMAERPDGSMQIEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R  GH+V  E+ ++   +++ 
Sbjct: 76  ISKALSPVLDVADPIDKAYRLEISSPGIDRPLVRRSDFERHAGHLVKVEMAVAHQGRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G + G  +    L ++    ++++E ++ +  + +  ARL++TDEL+  S+  
Sbjct: 136 RGILQGVKDNAIRLHRD--DVQNVDESEVLLVMEDIADARLVLTDELIAESMRR 187


>gi|328545920|ref|YP_004306029.1| ribosome maturation factor rimP [polymorphum gilvum SL003B-26A1]
 gi|326415660|gb|ADZ72723.1| Ribosome maturation factor rimP [Polymorphum gilvum SL003B-26A1]
          Length = 205

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 111/176 (63%), Gaps = 2/176 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S +E RI  + GL   ++++++PVIE++ +R V++ +       LQI  ER DG MT+ D
Sbjct: 2   SLHEARIVIEQGLEARVAAIVEPVIEDLGYRLVRVKISAANGCTLQIMAERPDGTMTVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S+A+SP LDV++ I   Y LE+SSPGIDRP+VR  DF RW+GHV   E+ +    +
Sbjct: 62  CEEVSRAVSPALDVDDPINRAYHLEISSPGIDRPLVRVGDFDRWSGHVAKVEMSVMQDGR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           ++  G ++G  +    L      +   +E+++ ++   +  ARL++TD+L+RA+L 
Sbjct: 122 KRFRGILLGAGDGTVRLRLTDTPKDVADEVRLPLA--EIAEARLVLTDDLIRAALQ 175


>gi|307942743|ref|ZP_07658088.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
 gi|307773539|gb|EFO32755.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
          Length = 200

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 6/173 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S++E RI  + GL   ++++++PVIE++ FR V+  +       LQI  ER DG MT+ D
Sbjct: 2   SEHEARIVTEQGLDARVAAIVEPVIEDLGFRLVRSKISAANGCTLQIMAERPDGTMTVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP LDV++ I   Y LEVSSPGIDRP+VR+SDF+RW+GH V  E+ +    +
Sbjct: 62  CETVSRAVSPALDVDDPISRAYHLEVSSPGIDRPLVRESDFVRWSGHEVKIEMSVLQEGR 121

Query: 129 QKLIGKIMGT--SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           ++  G ++G    ET   L   K GE D   L I      +  A+L++TD+L+
Sbjct: 122 KRFRGTLLGAENGETQIKLPDTKSGEVDAVSLPIG----DIGEAKLVLTDDLI 170


>gi|27375897|ref|NP_767426.1| hypothetical protein bll0786 [Bradyrhizobium japonicum USDA 110]
 gi|34222841|sp|Q89WA6|RIMP_BRAJA RecName: Full=Ribosome maturation factor rimP
 gi|27349035|dbj|BAC46051.1| bll0786 [Bradyrhizobium japonicum USDA 110]
          Length = 251

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 113/181 (62%), Gaps = 6/181 (3%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  +S+V  PV++ M +R V+I +  E    +QI  ER DG+M + DCE 
Sbjct: 16  EPRLVVEPGVAARVSAVAGPVLQGMGYRLVRIRISGEAGCTVQIMAERPDGSMQIEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ ++   +++ 
Sbjct: 76  ISRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFERYAGHLVKVEMAVAHEGRKRF 135

Query: 132 IGKIMGTSETGFFLEKE--KRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
            G I         L+++  K GE    E  + ++ + +  ARL++TDEL+  S+    + 
Sbjct: 136 RGMIGAVEGDRVHLQRDDVKAGE----ERNVLLTMEDISEARLVLTDELIAESMRRGKAA 191

Query: 190 A 190
           A
Sbjct: 192 A 192


>gi|86747723|ref|YP_484219.1| hypothetical protein RPB_0597 [Rhodopseudomonas palustris HaA2]
 gi|123408929|sp|Q2J2K2|RIMP_RHOP2 RecName: Full=Ribosome maturation factor rimP
 gi|86570751|gb|ABD05308.1| Protein of unknown function DUF150 [Rhodopseudomonas palustris
           HaA2]
          Length = 259

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 108/174 (62%), Gaps = 3/174 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A    +V +PV+  M +R V+I +  E    +QI  ER DG M + DCE 
Sbjct: 16  EPRLVVEPGVAARFGAVAEPVLLAMGYRLVRIKVSAEAGCTVQIMAERPDGTMLIEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + IE  YRLE+SSPGIDRP+VR+SDF R++GH+V  E+ +    +++ 
Sbjct: 76  VSKALSPVLDVTDPIEKAYRLEISSPGIDRPLVRRSDFARYSGHLVKIEMAVPHQGRKRY 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G + G       +++E  G KD + L + +    +  ARL++TDEL+  S+  
Sbjct: 136 RGLLDGVEGDAIRIQRE--GVKDEDPL-VLLPMHDIGDARLVLTDELIAESMRR 186


>gi|153008086|ref|YP_001369301.1| hypothetical protein Oant_0750 [Ochrobactrum anthropi ATCC 49188]
 gi|167016790|sp|A6WWW8|RIMP_OCHA4 RecName: Full=Ribosome maturation factor rimP
 gi|151559974|gb|ABS13472.1| protein of unknown function DUF150 [Ochrobactrum anthropi ATCC
           49188]
          Length = 224

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 107/179 (59%), Gaps = 2/179 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           L +  + RI  + G+   ++S+I+PVI  + FR V++ L       LQI  ER DG MT+
Sbjct: 13  LAAGADERIIRETGIDAKVASIIEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTV 72

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +   
Sbjct: 73  DDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFADWAGHIAKVETSVVHE 132

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            ++K  G+I+        +E ++      +E  + I FD +  ARL++TD+L+R +L  
Sbjct: 133 GRKKFRGRIVLGDAESVVIESDQISYG--SEPVVRIPFDLISDARLVLTDDLIRDALRK 189


>gi|110636251|ref|YP_676459.1| hypothetical protein Meso_3927 [Mesorhizobium sp. BNC1]
 gi|123352956|sp|Q11BD1|RIMP_MESSB RecName: Full=Ribosome maturation factor rimP
 gi|110287235|gb|ABG65294.1| protein of unknown function DUF150 [Chelativorans sp. BNC1]
          Length = 220

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 109/174 (62%), Gaps = 6/174 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           RI  + G A  +++++ PV++ + +R V++ L  +  L LQI  ER DG MT+ DCEE+S
Sbjct: 5   RIIRETGAAARVAAIVMPVLDALGYRLVRVRLSAQDGLTLQIMAERPDGTMTVDDCEEVS 64

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+SP LDVE+ I+  Y+LE+SSPGIDRP+VR SDF    GH+   E  +    +++  G
Sbjct: 65  RAVSPALDVEDPIDSAYQLEISSPGIDRPLVRLSDFQAALGHLAKVETSVMVDGRKRFRG 124

Query: 134 KIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +I+G +     +E++K   GE  + E    I  D++  A+L++TD L+R +L  
Sbjct: 125 QIVGCTGETLTIERDKVAEGEAPLAE----IPLDAISDAKLVLTDALIREALKK 174


>gi|90420534|ref|ZP_01228441.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335262|gb|EAS49015.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 232

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 106/166 (63%), Gaps = 2/166 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           RI  + GL G ++ +++P IE++ +R V++       + LQI  ER DG MT+ DCE +S
Sbjct: 37  RIVKEQGLEGRVAEIVEPAIEQIGYRLVRVRTSGLNGMTLQIMAERPDGTMTVEDCEAVS 96

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+SP+LDV++ I+  Y LEVSSPGIDRP+VRK DF  W G ++  E      ++++  G
Sbjct: 97  RAVSPVLDVDDPIDKAYHLEVSSPGIDRPLVRKGDFETWAGFLMKLETNRLINERKRYRG 156

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           KI+   +    +E+++  E +   ++  I FD++  ARLI+TD+L+
Sbjct: 157 KIVAVGDEAITVERDQPAEGEPGAVE--IPFDAIGEARLILTDDLI 200


>gi|254502830|ref|ZP_05114981.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
 gi|222438901|gb|EEE45580.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
          Length = 198

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 104/178 (58%), Gaps = 6/178 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S  EPRI  + GL   ++++I+PVIE++ +R V+  +       LQI  ER DG MT+ D
Sbjct: 2   SDQEPRIVTEQGLDARVAAIIEPVIEDLGYRLVRTRISAANGCTLQIMAERPDGTMTVDD 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP LDVE+ I   Y LEVSSPGIDRP+VR  DF RW GH +  E+ +    +
Sbjct: 62  CETISRAVSPALDVEDPINRAYHLEVSSPGIDRPLVRAGDFDRWAGHEMKVEMDVMQDGR 121

Query: 129 QKLIGKIMGTS--ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           ++  G ++G         L     GE D     + +  + +  A+L++TD+L+ A+L 
Sbjct: 122 KRFRGTLLGVEGVSAKMRLPDAPEGEADT----VLLPMEDIGEAKLVLTDDLITAALQ 175


>gi|256060122|ref|ZP_05450304.1| hypothetical protein Bneo5_07156 [Brucella neotomae 5K33]
 gi|261324099|ref|ZP_05963296.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261300079|gb|EEY03576.1| conserved hypothetical protein [Brucella neotomae 5K33]
          Length = 219

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 103/172 (59%), Gaps = 2/172 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER DG MT+ DCE +S
Sbjct: 20  RIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVS 79

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++K  G
Sbjct: 80  RTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHITKVETSIVHEGRKKFRG 139

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +I+        +E ++      NE  + I FD +  ARL++TD+L+R +L  
Sbjct: 140 RIVVGEADSVTIESDQISYG--NEPVVRIPFDLISDARLVLTDDLIRDALRK 189


>gi|254718199|ref|ZP_05180010.1| hypothetical protein Bru83_01396 [Brucella sp. 83/13]
 gi|265983157|ref|ZP_06095892.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306837713|ref|ZP_07470582.1| Protein of unknown function DUF150 [Brucella sp. NF 2653]
 gi|306843579|ref|ZP_07476180.1| Protein of unknown function DUF150 [Brucella sp. BO1]
 gi|264661749|gb|EEZ32010.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306276270|gb|EFM57970.1| Protein of unknown function DUF150 [Brucella sp. BO1]
 gi|306407271|gb|EFM63481.1| Protein of unknown function DUF150 [Brucella sp. NF 2653]
          Length = 219

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 103/172 (59%), Gaps = 2/172 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER DG MT+ DCE +S
Sbjct: 20  RIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVS 79

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++K  G
Sbjct: 80  RTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVETSIVHEGRKKFRG 139

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +I+        +E ++      NE  + I FD +  ARL++TD+L+R +L  
Sbjct: 140 RIVVGDADSVTIESDQISYG--NEPVVRIPFDLISDARLVLTDDLIRDALRK 189


>gi|62290999|ref|YP_222792.1| hypothetical protein BruAb1_2135 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700908|ref|YP_415482.1| hypothetical protein BAB1_2162 [Brucella melitensis biovar Abortus
           2308]
 gi|189025211|ref|YP_001935979.1| hypothetical protein BAbS19_I20230 [Brucella abortus S19]
 gi|237816501|ref|ZP_04595494.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|254696409|ref|ZP_05158237.1| hypothetical protein Babob28_01503 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731322|ref|ZP_05189900.1| hypothetical protein Babob42_09020 [Brucella abortus bv. 4 str.
           292]
 gi|260546262|ref|ZP_05822002.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260759056|ref|ZP_05871404.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260760781|ref|ZP_05873124.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|75496020|sp|Q57AA3|RIMP_BRUAB RecName: Full=Ribosome maturation factor rimP
 gi|91208402|sp|Q2YQS0|RIMP_BRUA2 RecName: Full=Ribosome maturation factor rimP
 gi|259585733|sp|B2S9F3|RIMP_BRUA1 RecName: Full=Ribosome maturation factor rimP
 gi|62197131|gb|AAX75431.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82617009|emb|CAJ12118.1| Domain of unknown function DUF150 [Brucella melitensis biovar
           Abortus 2308]
 gi|189020783|gb|ACD73505.1| Domain of unknown function DUF150 [Brucella abortus S19]
 gi|237788568|gb|EEP62783.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260096369|gb|EEW80245.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260669374|gb|EEX56314.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260671213|gb|EEX58034.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 219

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 103/172 (59%), Gaps = 2/172 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER DG MT+ DCE +S
Sbjct: 20  RIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVS 79

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++K  G
Sbjct: 80  RTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVETSIVHEGRKKFRG 139

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +I+        +E ++      NE  + I FD +  ARL++TD+L+R +L  
Sbjct: 140 RIVVGEADSVTIESDQISYG--NEPVVRIPFDLISDARLVLTDDLIRDALRK 189


>gi|17988251|ref|NP_540885.1| hypothetical protein BMEI1968 [Brucella melitensis bv. 1 str. 16M]
 gi|23503010|ref|NP_699137.1| hypothetical protein BR2162 [Brucella suis 1330]
 gi|148560565|ref|YP_001259956.1| hypothetical protein BOV_2074 [Brucella ovis ATCC 25840]
 gi|161620070|ref|YP_001593957.1| hypothetical protein BCAN_A2204 [Brucella canis ATCC 23365]
 gi|163844175|ref|YP_001628580.1| hypothetical protein BSUIS_A1999 [Brucella suis ATCC 23445]
 gi|225853587|ref|YP_002733820.1| hypothetical protein BMEA_A2222 [Brucella melitensis ATCC 23457]
 gi|254690293|ref|ZP_05153547.1| hypothetical protein Babob68_08992 [Brucella abortus bv. 6 str.
           870]
 gi|254694781|ref|ZP_05156609.1| hypothetical protein Babob3T_08988 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254700791|ref|ZP_05162619.1| hypothetical protein Bsuib55_08022 [Brucella suis bv. 5 str. 513]
 gi|254705160|ref|ZP_05166988.1| hypothetical protein Bsuib36_14811 [Brucella suis bv. 3 str. 686]
 gi|254709136|ref|ZP_05170947.1| hypothetical protein BpinB_02482 [Brucella pinnipedialis B2/94]
 gi|254713439|ref|ZP_05175250.1| hypothetical protein BcetM6_08809 [Brucella ceti M644/93/1]
 gi|254716205|ref|ZP_05178016.1| hypothetical protein BcetM_07186 [Brucella ceti M13/05/1]
 gi|256030661|ref|ZP_05444275.1| hypothetical protein BpinM2_08407 [Brucella pinnipedialis
           M292/94/1]
 gi|256045765|ref|ZP_05448643.1| hypothetical protein Bmelb1R_14765 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112484|ref|ZP_05453405.1| hypothetical protein Bmelb3E_07358 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256158663|ref|ZP_05456546.1| hypothetical protein BcetM4_07321 [Brucella ceti M490/95/1]
 gi|256254067|ref|ZP_05459603.1| hypothetical protein BcetB_07163 [Brucella ceti B1/94]
 gi|256258546|ref|ZP_05464082.1| hypothetical protein Babob9C_14597 [Brucella abortus bv. 9 str.
           C68]
 gi|256262929|ref|ZP_05465461.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|256370557|ref|YP_003108068.1| hypothetical protein BMI_I2183 [Brucella microti CCM 4915]
 gi|260563061|ref|ZP_05833547.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260567371|ref|ZP_05837841.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260755833|ref|ZP_05868181.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260884858|ref|ZP_05896472.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261215108|ref|ZP_05929389.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261217979|ref|ZP_05932260.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261221208|ref|ZP_05935489.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261316636|ref|ZP_05955833.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261321171|ref|ZP_05960368.1| hypothetical protein BAIG_01745 [Brucella ceti M644/93/1]
 gi|261751300|ref|ZP_05995009.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261755865|ref|ZP_05999574.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|265987708|ref|ZP_06100265.1| hypothetical protein BALG_00285 [Brucella pinnipedialis M292/94/1]
 gi|265992182|ref|ZP_06104739.1| hypothetical protein BAMG_02674 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993920|ref|ZP_06106477.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265997169|ref|ZP_06109726.1| hypothetical protein BAPG_00290 [Brucella ceti M490/95/1]
 gi|294851386|ref|ZP_06792059.1| hypothetical protein BAZG_00287 [Brucella sp. NVSL 07-0026]
 gi|297247385|ref|ZP_06931103.1| hypothetical protein BAYG_00286 [Brucella abortus bv. 5 str. B3196]
 gi|54040492|sp|P67213|RIMP_BRUSU RecName: Full=Ribosome maturation factor rimP
 gi|54042664|sp|P67212|RIMP_BRUME RecName: Full=Ribosome maturation factor rimP
 gi|166980272|sp|A5VTA9|RIMP_BRUO2 RecName: Full=Ribosome maturation factor rimP
 gi|189039426|sp|B0CK08|RIMP_BRUSI RecName: Full=Ribosome maturation factor rimP
 gi|189039778|sp|A9M9Z1|RIMP_BRUC2 RecName: Full=Ribosome maturation factor rimP
 gi|254801690|sp|C0RG44|RIMP_BRUMB RecName: Full=Ribosome maturation factor rimP
 gi|17984019|gb|AAL53149.1| protein associated with nus operon [Brucella melitensis bv. 1 str.
           16M]
 gi|23349050|gb|AAN31052.1| conserved hypothetical protein [Brucella suis 1330]
 gi|148371822|gb|ABQ61801.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
 gi|161336881|gb|ABX63186.1| hypothetical protein BCAN_A2204 [Brucella canis ATCC 23365]
 gi|163674898|gb|ABY39009.1| Hypothetical protein BSUIS_A1999 [Brucella suis ATCC 23445]
 gi|225641952|gb|ACO01866.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|256000720|gb|ACU49119.1| hypothetical protein BMI_I2183 [Brucella microti CCM 4915]
 gi|260153077|gb|EEW88169.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260156889|gb|EEW91969.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260675941|gb|EEX62762.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260874386|gb|EEX81455.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260916715|gb|EEX83576.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260919792|gb|EEX86445.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260923068|gb|EEX89636.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261293861|gb|EEX97357.1| hypothetical protein BAIG_01745 [Brucella ceti M644/93/1]
 gi|261295859|gb|EEX99355.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261741053|gb|EEY28979.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261745618|gb|EEY33544.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262551637|gb|EEZ07627.1| hypothetical protein BAPG_00290 [Brucella ceti M490/95/1]
 gi|262764901|gb|EEZ10822.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003248|gb|EEZ15541.1| hypothetical protein BAMG_02674 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263092803|gb|EEZ16978.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264659905|gb|EEZ30166.1| hypothetical protein BALG_00285 [Brucella pinnipedialis M292/94/1]
 gi|294819975|gb|EFG36974.1| hypothetical protein BAZG_00287 [Brucella sp. NVSL 07-0026]
 gi|297174554|gb|EFH33901.1| hypothetical protein BAYG_00286 [Brucella abortus bv. 5 str. B3196]
 gi|326410160|gb|ADZ67225.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326539878|gb|ADZ88093.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 219

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 103/172 (59%), Gaps = 2/172 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER DG MT+ DCE +S
Sbjct: 20  RIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVS 79

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++K  G
Sbjct: 80  RTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVETSIVHEGRKKFRG 139

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +I+        +E ++      NE  + I FD +  ARL++TD+L+R +L  
Sbjct: 140 RIVVGEADSVTIESDQISYG--NEPVVRIPFDLISDARLVLTDDLIRDALRK 189


>gi|259585702|sp|A8IG16|RIMP_AZOC5 RecName: Full=Ribosome maturation factor rimP
          Length = 291

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 109/174 (62%), Gaps = 6/174 (3%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  I++++ PV+ +++ R V++ +        QI  ER DG+MT+ DCE 
Sbjct: 12  EPRLITESGVAARIAAIVTPVLADLNLRLVRVKVTARDGGTCQIMAERPDGSMTIDDCEA 71

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            S+AISP+LDVE+ I G YRLE+SSPGIDRP+VR +DF RW GH V  E+ +    +++ 
Sbjct: 72  ASRAISPVLDVEDPITGAYRLEISSPGIDRPLVRLTDFDRWAGHEVKVEMAVPVDGRKRF 131

Query: 132 IGKIMGTSETGFFLEK--EKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            G ++GT      +++    +GE    E ++++    +  A+L++TD L+  +L
Sbjct: 132 RGILIGTRAELAVVKRTDAPKGE----EPEVSLPVADIGEAKLVLTDALITEAL 181


>gi|158421641|ref|YP_001522933.1| hypothetical protein AZC_0017 [Azorhizobium caulinodans ORS 571]
 gi|158328530|dbj|BAF86015.1| uncharacterized protein [Azorhizobium caulinodans ORS 571]
          Length = 329

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 109/176 (61%), Gaps = 6/176 (3%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  I++++ PV+ +++ R V++ +        QI  ER DG+MT+ DCE 
Sbjct: 50  EPRLITESGVAARIAAIVTPVLADLNLRLVRVKVTARDGGTCQIMAERPDGSMTIDDCEA 109

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            S+AISP+LDVE+ I G YRLE+SSPGIDRP+VR +DF RW GH V  E+ +    +++ 
Sbjct: 110 ASRAISPVLDVEDPITGAYRLEISSPGIDRPLVRLTDFDRWAGHEVKVEMAVPVDGRKRF 169

Query: 132 IGKIMGTSETGFFLEK--EKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G ++GT      +++    +GE    E ++++    +  A+L++TD L+  +L  
Sbjct: 170 RGILIGTRAELAVVKRTDAPKGE----EPEVSLPVADIGEAKLVLTDALITEALRR 221


>gi|254471146|ref|ZP_05084549.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
 gi|211960288|gb|EEA95485.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
          Length = 196

 Score =  134 bits (336), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 101/171 (59%), Gaps = 8/171 (4%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           +PRI  + GL   ++ +++PVI ++ +R V+I +       LQI  ER DG M + DCEE
Sbjct: 5   DPRIVKEKGLEARVAEIVEPVIVDLGYRLVRIRVNGNNGCTLQIMAERPDGTMAVEDCEE 64

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S A+SP LDV++ I G Y LE+SSPGIDRP+VR  DF RW GHVV  E+ +    +++ 
Sbjct: 65  ISHAVSPALDVDDPISGAYHLEISSPGIDRPLVRAGDFERWVGHVVKIEMSVPQAGRKRY 124

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQ---IAISFDSLLSARLIVTDELL 179
            G I+G  E    +        D+ E Q     +  D + SA L++TDEL+
Sbjct: 125 RGHIIGVEEGNAVIRM-----TDVQEGQDEAAHLPLDEIGSAVLVLTDELI 170


>gi|225626527|ref|ZP_03784566.1| Protein of unknown function DUF150 [Brucella ceti str. Cudo]
 gi|260169565|ref|ZP_05756376.1| hypothetical protein BruF5_14639 [Brucella sp. F5/99]
 gi|261759093|ref|ZP_06002802.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|225618184|gb|EEH15227.1| Protein of unknown function DUF150 [Brucella ceti str. Cudo]
 gi|261739077|gb|EEY27073.1| conserved hypothetical protein [Brucella sp. F5/99]
          Length = 219

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 2/172 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER DG MT+ DCE +S
Sbjct: 20  RIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVS 79

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++K  G
Sbjct: 80  RTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVETSIVHEGRKKFRG 139

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +I+        +E ++      NE  + I FD +  ARL++TD+ +R +L  
Sbjct: 140 RIVVGEADSVTIESDQISYG--NEPVVRIPFDLISDARLVLTDDFIRDALRK 189


>gi|85714178|ref|ZP_01045167.1| hypothetical protein NB311A_08478 [Nitrobacter sp. Nb-311A]
 gi|85699304|gb|EAQ37172.1| hypothetical protein NB311A_08478 [Nitrobacter sp. Nb-311A]
          Length = 259

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 108/172 (62%), Gaps = 2/172 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  ++++  PV++ M +R V+I +  E    LQI  ER DG+M + DCE 
Sbjct: 16  EPRLVLEPGVAARVATIAAPVLQGMGYRLVRIKVSGEAGCTLQIMAERPDGSMQIEDCET 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+   E+ ++   +++ 
Sbjct: 76  ISKMLSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFERYAGHLAKVEMAVAHQGRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            G + G  +    L ++   +   N+  + +  + +  ARL++TDEL+  S+
Sbjct: 136 RGILRGVEDNAVRLHRDDVQQD--NDADVLLIMEDIADARLVLTDELIAESM 185


>gi|259586221|sp|Q21C34|RIMP_RHOPB RecName: Full=Ribosome maturation factor rimP
          Length = 262

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 106/174 (60%), Gaps = 2/174 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + GL   +++V  PV++ M +R V+I +  E    +QI  ER DG M + DCE 
Sbjct: 16  EPRLVVEPGLGARVAAVAGPVLQGMGYRLVRIKVSGELGCTVQIMAERPDGTMLVEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S A+SP+LD+ + +E  YRLE+SSPGIDRP+VR+SDF R+ G++V  E+ ++ G +++ 
Sbjct: 76  ISHALSPVLDIADPVERAYRLEISSPGIDRPLVRRSDFERYEGYLVKIEMAVAVGGRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G +         L +E  G +D  +    +  + + SA L++TDEL+  S+  
Sbjct: 136 RGLLGPLQGDAVLLARE--GARDGEDPNSLLPLEDIASANLVLTDELIAESMRR 187


>gi|90422001|ref|YP_530371.1| hypothetical protein RPC_0477 [Rhodopseudomonas palustris BisB18]
 gi|90104015|gb|ABD86052.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           BisB18]
          Length = 272

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 106/174 (60%), Gaps = 2/174 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + GL   +++V  PV++ M +R V+I +  E    +QI  ER DG M + DCE 
Sbjct: 26  EPRLVVEPGLGARVAAVAGPVLQGMGYRLVRIKVSGELGCTVQIMAERPDGTMLVEDCEA 85

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S A+SP+LD+ + +E  YRLE+SSPGIDRP+VR+SDF R+ G++V  E+ ++ G +++ 
Sbjct: 86  ISHALSPVLDIADPVERAYRLEISSPGIDRPLVRRSDFERYEGYLVKIEMAVAVGGRKRF 145

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G +         L +E  G +D  +    +  + + SA L++TDEL+  S+  
Sbjct: 146 RGLLGPLQGDAVLLARE--GARDGEDPNSLLPLEDIASANLVLTDELIAESMRR 197


>gi|239833210|ref|ZP_04681539.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239825477|gb|EEQ97045.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 240

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 103/172 (59%), Gaps = 2/172 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           RI  + G+   ++ +++PV+  + FR V++ L       LQI  ER DG MT+ DCE +S
Sbjct: 36  RIIRETGIDAKVAGIVEPVLNTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVS 95

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++K  G
Sbjct: 96  RTVAPVLDVEDPINGKYHLEISSPGIDRPLVRKSDFADWAGHIAKVETSIVHEGRKKFRG 155

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +I+        +E ++      +E  + I FD +  ARL++TD+L+R +L  
Sbjct: 156 RIVLGDAESVVIESDQISYG--SEPVVRIPFDLISDARLVLTDDLIRDALRK 205


>gi|91974716|ref|YP_567375.1| hypothetical protein RPD_0234 [Rhodopseudomonas palustris BisB5]
 gi|123749481|sp|Q13EL5|RIMP_RHOPS RecName: Full=Ribosome maturation factor rimP
 gi|91681172|gb|ABE37474.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           BisB5]
          Length = 262

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 108/174 (62%), Gaps = 2/174 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A   ++V +PV++ M +R V+I +  E    +QI  ER DG M + DCE 
Sbjct: 16  EPRLVVEPGVAARFAAVAEPVLQAMGYRLVRIKVSGEAGCTVQIMAERPDGTMLIDDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR SDF R++GH+V  E+ +    +++ 
Sbjct: 76  VSRALSPVLDVTDPIDRAYRLEISSPGIDRPLVRSSDFARYSGHLVKIEMAVPHQGRKRY 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G + G       +++E    KD + L + +    +  ARL++TDEL+  S+  
Sbjct: 136 RGLLDGVEGDAIRIQREG-VTKDEDPL-VLLPMHDIGDARLVLTDELVAESMRR 187


>gi|304392763|ref|ZP_07374703.1| conserved hypothetical protein [Ahrensia sp. R2A130]
 gi|303295393|gb|EFL89753.1| conserved hypothetical protein [Ahrensia sp. R2A130]
          Length = 213

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 107/176 (60%), Gaps = 2/176 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
           + + + R+  + GL   ++SVI PVIE++ +R V++ +++   L +QIF ER DG M++ 
Sbjct: 20  NDRADARLVKEEGLDAKVASVIAPVIEDLGYRLVRVRMVDHNGLTMQIFAERPDGTMSVG 79

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           +CE +S+A+SP+LDVE+ +   Y LEV SPGIDRP+VR+SDF  W GH    E       
Sbjct: 80  ECEIISKALSPVLDVEDPVTQAYNLEVGSPGIDRPLVRRSDFETWTGHTAKIETAYLVDG 139

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +++  GK++        L ++     +  +  + +   ++ SA L++TD+L+R +L
Sbjct: 140 RKRFRGKLVAVDGEIVKLRRDNAASGEDKDADVPLH--AIASASLVLTDDLIREAL 193


>gi|300024994|ref|YP_003757605.1| hypothetical protein Hden_3493 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526815|gb|ADJ25284.1| protein of unknown function DUF150 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 213

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 110/173 (63%), Gaps = 6/173 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL---EEKNLLLQIFVERDDGNMTLRDCE 70
           R   + G+A +++++++PV+E++ FR V++ +       + ++Q+  ER DG++T+ DCE
Sbjct: 20  RFLRETGVAAEVAAIVEPVLEDLGFRLVRVKVQGGGATADKIVQLMAERPDGSITVDDCE 79

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ +SP+LDV + + G YRLEVSSPGIDRP+VR SDF  W+GH    E+  + G ++K
Sbjct: 80  TISKQVSPVLDVADPVSGAYRLEVSSPGIDRPLVRPSDFEDWSGHEAKIELTEAVGGRRK 139

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
             G + G  +    +E +  GE  +  L + +    +  ARL++TDEL+R +L
Sbjct: 140 FKGMLEGFEDGEVRIEADT-GEHGIQHLGLPVHL--ISDARLVLTDELIREAL 189


>gi|114705361|ref|ZP_01438269.1| hypothetical protein FP2506_10491 [Fulvimarina pelagi HTCC2506]
 gi|114540146|gb|EAU43266.1| hypothetical protein FP2506_10491 [Fulvimarina pelagi HTCC2506]
          Length = 202

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 107/176 (60%), Gaps = 2/176 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           ++ E RI  + GL   I+S+++P IE+  +R V++ +       +QI  ER DG M +  
Sbjct: 2   TEKETRIVTEDGLEAKIASIVEPAIEQTGYRLVRVRVSGMNGKTVQIMAERPDGTMDVEG 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S+AISP+L+ E+ ++G Y LE+SSPGIDRP+VR SDF  W G ++  E      D+
Sbjct: 62  CEEVSRAISPVLETEDPVDGAYHLELSSPGIDRPLVRVSDFETWAGFLMKLETSRLVADR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           ++  GKI+        +E+++    +   ++  I  D++  ARL++TD+L+ ASL 
Sbjct: 122 KRYRGKIVKVENGTITIERDQPAYGEPASVE--IPLDAVADARLVLTDDLIEASLK 175


>gi|316931576|ref|YP_004106558.1| hypothetical protein Rpdx1_0181 [Rhodopseudomonas palustris DX-1]
 gi|315599290|gb|ADU41825.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           DX-1]
          Length = 259

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 109/176 (61%), Gaps = 6/176 (3%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A    +V +PV+  M +R V+I +  E    +QI  ER DG M + DCE 
Sbjct: 16  EPRLVIEPGVAARFCAVAEPVLLAMGYRLVRIKVSGEAGCTVQIMAERPDGTMLIDDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ ++   +++ 
Sbjct: 76  VSRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFARYAGHLVKVEMAVAHQGRKRF 135

Query: 132 IGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G + G       +++++  +GE  +    + ++   +  ARL++TDEL+  S+  
Sbjct: 136 RGLLDGVEGDAVRIQRDEAPKGEDPL----VLLAMHDIGDARLVLTDELVAESMRR 187


>gi|39933516|ref|NP_945792.1| hypothetical protein RPA0439 [Rhodopseudomonas palustris CGA009]
 gi|51316646|sp|Q6NCN2|RIMP_RHOPA RecName: Full=Ribosome maturation factor rimP
 gi|39647362|emb|CAE25883.1| DUF150 [Rhodopseudomonas palustris CGA009]
          Length = 259

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 106/174 (60%), Gaps = 2/174 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A    +V +PV+  M +R V+I +  +    +QI  ER DG M + DCE 
Sbjct: 16  EPRLVIEPGVAARFCAVAEPVLMAMGYRLVRIKVSGDAGCTVQIMAERPDGTMLIDDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ +    +++ 
Sbjct: 76  VSRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFARYAGHLVKIEMAVPHQGRKRY 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G + G       +++E    KD + L + +    +  ARL++TDEL+  S+  
Sbjct: 136 RGLLDGVEGDAVRVQREG-ATKDEDPL-VLLPMHDIGDARLVLTDELIAESMRR 187


>gi|209883665|ref|YP_002287522.1| hypothetical protein OCAR_4512 [Oligotropha carboxidovorans OM5]
 gi|226706198|sp|B6JCS7|RIMP_OLICO RecName: Full=Ribosome maturation factor rimP
 gi|209871861|gb|ACI91657.1| hypothetical protein OCAR_4512 [Oligotropha carboxidovorans OM5]
          Length = 260

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 106/178 (59%), Gaps = 1/178 (0%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S  EPR+  + G+A  ++++ +PV+E + +R V+I +  E    +QI  ER DG M + D
Sbjct: 13  STAEPRLVVEPGVAARVAAIAEPVLEGLGYRLVRIKISGEAGCTVQIMAERPDGTMLIDD 72

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP++DV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+      +
Sbjct: 73  CEAVSKALSPVMDVADPIQRAYRLEISSPGIDRPLVRQSDFERYTGHLVKIEMAAPHEGR 132

Query: 129 QKLIGKIMGTSETGFFLEK-EKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           ++  G + G  +    + + + +  +        +    + SA L++TD+L+  S+  
Sbjct: 133 KRFRGTLQGIEDNLVRITRDDAKSHEGAQPADARLPLADIASAHLVLTDQLIAESMRR 190


>gi|192288874|ref|YP_001989479.1| hypothetical protein Rpal_0443 [Rhodopseudomonas palustris TIE-1]
 gi|226706186|sp|B3QAB7|RIMP_RHOPT RecName: Full=Ribosome maturation factor rimP
 gi|192282623|gb|ACE99003.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           TIE-1]
          Length = 259

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 105/174 (60%), Gaps = 2/174 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A    +V +PV+  M +R V+I +  +    +QI  ER DG M + DCE 
Sbjct: 16  EPRLVIEPGVAARFCAVAEPVLMAMGYRLVRIKVSGDAGCTVQIMAERPDGTMLIDDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ +    +++ 
Sbjct: 76  ASRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFARYAGHLVKIEMAVPHQGRKRY 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G + G       +++E    KD + L + +    +  ARL++TDEL+  S+  
Sbjct: 136 RGLLDGVEGDAVRVQREG-ATKDEDPL-VLLPMHDIGDARLVLTDELIAESMRR 187


>gi|154244253|ref|YP_001415211.1| hypothetical protein Xaut_0296 [Xanthobacter autotrophicus Py2]
 gi|259645219|sp|A7IC11|RIMP_XANP2 RecName: Full=Ribosome maturation factor rimP
 gi|154158338|gb|ABS65554.1| protein of unknown function DUF150 [Xanthobacter autotrophicus Py2]
          Length = 286

 Score =  127 bits (318), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 105/178 (58%), Gaps = 2/178 (1%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMT 65
            L    EPR+  + G+A  ++++   V+  + +R V++ +       LQI  ER DG M+
Sbjct: 7   VLDDPNEPRLITETGVAARVAAIASGVLGALGYRLVRVKVTNRDGGTLQIMAERPDGTMS 66

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           + DCE  S+A+SP+LDVE+ I   YRLE+SSPGIDRP+VR+SDF+RW GH V  E+    
Sbjct: 67  IDDCEAASRALSPVLDVEDPISSAYRLEMSSPGIDRPLVRQSDFVRWAGHEVKVEMARPV 126

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
             +++  G ++G +E G  + + +       E  + +    +  A+L++TD L+R +L
Sbjct: 127 DGRKRFRGILIG-AEDGIAVVR-RLDAPATEEPTVRLPVADIHDAKLMLTDALIREAL 182


>gi|254707322|ref|ZP_05169150.1| hypothetical protein BpinM_10195 [Brucella pinnipedialis
           M163/99/10]
 gi|261314804|ref|ZP_05954001.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261303830|gb|EEY07327.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
          Length = 192

 Score =  127 bits (318), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 97/159 (61%), Gaps = 2/159 (1%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++++PVI  + FR V++ L       LQI  ER DG MT+ DCE +S+ ++P+LDVE+ I
Sbjct: 6   ALLEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVSRTVAPVLDVEDPI 65

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++K  G+I+        +E
Sbjct: 66  SGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVETSIVHEGRKKFRGRIVVGEADSVTIE 125

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            ++      NE  + I FD +  ARL++TD+L+R +L  
Sbjct: 126 SDQISYG--NEPVVRIPFDLISDARLVLTDDLIRDALRK 162


>gi|296448219|ref|ZP_06890115.1| protein of unknown function DUF150 [Methylosinus trichosporium
           OB3b]
 gi|296254259|gb|EFH01390.1| protein of unknown function DUF150 [Methylosinus trichosporium
           OB3b]
          Length = 251

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 3/176 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+ G+ G+A  I+ + +PV+ ++ +R V+  +L +  ++LQI  ER DG MT+ DCE 
Sbjct: 16  EPRLCGETGVAARIAHIAEPVLAQLGYRLVRARILSQNGVILQIMAERPDGTMTIEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQK 130
            SQA+SP LDVE+ I   YRLE+SSPGIDRP+VR SDF R  G     E+ L  +  +++
Sbjct: 76  ASQALSPELDVEDAIADAYRLELSSPGIDRPLVRVSDFRRAIGQEAKIELTLPLASGRKR 135

Query: 131 LIGKIMGTSETG--FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
             G I+     G       E++      E  + +    L  A+L++T+ L+R SL 
Sbjct: 136 FRGDIIAVEGEGREAVATLERKDAPPDEEKTVRLPLRDLDEAKLMLTEALIRESLR 191


>gi|217978444|ref|YP_002362591.1| protein of unknown function DUF150 [Methylocella silvestris BL2]
 gi|259585790|sp|B8EIB0|RIMP_METSB RecName: Full=Ribosome maturation factor rimP
 gi|217503820|gb|ACK51229.1| protein of unknown function DUF150 [Methylocella silvestris BL2]
          Length = 279

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 101/170 (59%), Gaps = 2/170 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  I+ +  PV+ ++ +R V++ L  +  + +QI  ER DG MT+ DCE 
Sbjct: 17  EPRLVAETGVAARIAHIATPVLADLGYRLVRVKLSAQDGMTVQIMAERPDGAMTVNDCEA 76

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S A+SP LDVE++++  YRLE+SSPGIDRP+VR SDF R        E+ L    +++ 
Sbjct: 77  VSAALSPALDVEDVVKQAYRLEISSPGIDRPLVRVSDFRRALDQEARIELRLGLDGRKRF 136

Query: 132 IGKIMGTSETG--FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
            G I G +  G    +  E+   K    ++  +  D L  A+L++T+EL+
Sbjct: 137 RGLIKGVTGAGAAAVVTLERVDAKPGEAVEAVLPLDDLAEAKLVLTEELI 186


>gi|170740832|ref|YP_001769487.1| hypothetical protein M446_2614 [Methylobacterium sp. 4-46]
 gi|259585789|sp|B0UL53|RIMP_METS4 RecName: Full=Ribosome maturation factor rimP
 gi|168195106|gb|ACA17053.1| protein of unknown function DUF150 [Methylobacterium sp. 4-46]
          Length = 201

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 6/185 (3%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
           H   E R+  + G+A  ++ +++P +E + FR V++ +  +    +QI  ER DG MT+ 
Sbjct: 7   HHATEKRLITETGVAARVAQIVEPSLEGLGFRLVRVRVTGQNGCTVQIMAERPDGTMTVE 66

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE +S+ ISP+LDV++ I   Y LE+SSPGIDRP+VR  DF RW GH    E+ +    
Sbjct: 67  DCEAVSRTISPLLDVDDPIGRAYHLEISSPGIDRPLVRAGDFARWAGHEAKVELAVPLEG 126

Query: 128 KQKLIGKIMGT--SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +++  G I     +     L   K G     EL++A     +  A L++TD+L+R SL  
Sbjct: 127 RKRFRGLIRAPEGATVRIDLPDAKEGTPASYELRLA----DIGEAHLVLTDDLIRESLRR 182

Query: 186 YGSYA 190
             + A
Sbjct: 183 GSAPA 187


>gi|323136837|ref|ZP_08071918.1| protein of unknown function DUF150 [Methylocystis sp. ATCC 49242]
 gi|322398154|gb|EFY00675.1| protein of unknown function DUF150 [Methylocystis sp. ATCC 49242]
          Length = 255

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 5/176 (2%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  ++ + +PV+ ++ FR V++ LL++    LQI  ER DG MT+ DCE 
Sbjct: 15  EPRLVSETGVAARVAHLAEPVLAQLGFRLVRVRLLQQNGQTLQIMAERPDGTMTIDDCEA 74

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV--LSSGDKQ 129
            SQA+SP LDV ++I   YRLE+SSPG+DRP+VR SDF R  GH    E+   + SG ++
Sbjct: 75  ASQALSPELDVADVIANEYRLEISSPGVDRPLVRVSDFARAVGHEARIELTHPVESG-RK 133

Query: 130 KLIGKIMGTSETG--FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +  G I      G    L  E+   +   E  + +    L   +L++T+ L+R SL
Sbjct: 134 RFRGVIQAVEGEGRNAKLTLERLDARSDEEKTVVLPLADLDEGKLMLTEALIRESL 189


>gi|299133376|ref|ZP_07026571.1| protein of unknown function DUF150 [Afipia sp. 1NLS2]
 gi|298593513|gb|EFI53713.1| protein of unknown function DUF150 [Afipia sp. 1NLS2]
          Length = 264

 Score =  124 bits (310), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 106/176 (60%), Gaps = 3/176 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           E R+  + G+A  ++++ +PV+E + ++ V+I +  E    +QI  ER DG M + DCE 
Sbjct: 21  ERRLVVEPGVAARVAAIAEPVLEGLGYQLVRIKISGEAGCTVQIMAERPDGTMLIDDCEA 80

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP++DV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ +    +++ 
Sbjct: 81  ISKALSPVMDVADPIQRAYRLEISSPGIDRPLVRQSDFERYTGHLVKIEMSVPHDGRKRF 140

Query: 132 IGKIMGTSETGF--FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G + G  E G       + +  K   E  + +    + SA L++T+EL+  S+  
Sbjct: 141 RGTLEGI-ENGLVRITRDDVKEHKGAQEADVQLPLADIASANLVLTNELIAESMRR 195


>gi|298293855|ref|YP_003695794.1| hypothetical protein Snov_3905 [Starkeya novella DSM 506]
 gi|296930366|gb|ADH91175.1| protein of unknown function DUF150 [Starkeya novella DSM 506]
          Length = 270

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 6/174 (3%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G A  ++ ++ PV+E + FR V++ +       LQI  ER DG+  + +CE 
Sbjct: 26  EPRLVTESGPAARVAGIVGPVLEGLGFRLVRVRISGGSPPTLQIMAERPDGSFGIDECEA 85

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            S+AISP+LDVE+ I G Y LE+SSPGIDRP+ R SDF RW GH V  E+ +    +++ 
Sbjct: 86  ASRAISPVLDVEDPISGAYNLEMSSPGIDRPLARLSDFERWAGHDVKVEMAVPVDGRKRF 145

Query: 132 IGKIMGTS--ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            G ++G    E    L      + D     +A+    +  ARL++TD L+R +L
Sbjct: 146 RGILVGAQREEALVRLPDAPADKPDT----VALPISDIGEARLVMTDALIREAL 195


>gi|148251678|ref|YP_001236263.1| hypothetical protein BBta_0054 [Bradyrhizobium sp. BTAi1]
 gi|166919104|sp|A5E863|RIMP_BRASB RecName: Full=Ribosome maturation factor rimP
 gi|146403851|gb|ABQ32357.1| hypothetical protein BBta_0054 [Bradyrhizobium sp. BTAi1]
          Length = 253

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 109/174 (62%), Gaps = 2/174 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  +++V +PV++ M +R V+I +  E    +Q+  ER DG M + DCE 
Sbjct: 16  EPRLVVEPGVAARVAAVAEPVLQGMGYRLVRIRISGEAGCTVQVMAERPDGTMQIEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LD+ + I+  YRLE+SSPGIDRP+VR++DF R  GH+V  E+ ++  ++++ 
Sbjct: 76  VSRALSPVLDIADPIDRAYRLEISSPGIDRPLVRRTDFERHIGHLVKIEMAVAHQNRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G I G    G  + ++    KD +   + +    +  A+L++TDEL+  S+  
Sbjct: 136 RGIITGLDGDGVCITRDDVA-KDQDP-SVVLPMTDIGDAKLVLTDELIAESMRR 187


>gi|170750128|ref|YP_001756388.1| hypothetical protein Mrad2831_3730 [Methylobacterium radiotolerans
           JCM 2831]
 gi|259585788|sp|B1LX00|RIMP_METRJ RecName: Full=Ribosome maturation factor rimP
 gi|170656650|gb|ACB25705.1| protein of unknown function DUF150 [Methylobacterium radiotolerans
           JCM 2831]
          Length = 257

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 98/177 (55%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           E R+  + G+A  ++  I+  +  + FR V++ +       +QI  ER DG  T+ DCE 
Sbjct: 11  EKRLVREAGVAARVAQAIEGPLAGLGFRLVRVRMSNVNGCTVQIMAERPDGTFTIDDCEA 70

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+AISPILDV++ + G Y LEVSSPGIDRP+VR SDF RW G+    E+      +++ 
Sbjct: 71  VSRAISPILDVDDPVGGAYNLEVSSPGIDRPLVRVSDFARWAGYEAKVELSPPLDGRKRF 130

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
            G +     TG  +  +    K+    +I +    L  A L++TDEL+R SL   G 
Sbjct: 131 RGILGAPDPTGTTVPIDLPDVKEGLPSRIDLPLKDLAEAHLVLTDELIRESLRRGGP 187


>gi|75674220|ref|YP_316641.1| hypothetical protein Nwi_0021 [Nitrobacter winogradskyi Nb-255]
 gi|91207993|sp|Q3SWQ2|RIMP_NITWN RecName: Full=Ribosome maturation factor rimP
 gi|74419090|gb|ABA03289.1| Protein of unknown function DUF150 [Nitrobacter winogradskyi
           Nb-255]
          Length = 260

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 110/172 (63%), Gaps = 1/172 (0%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  ++++  PV++ M +R V+I +  E    +QI  ER DG++ + DCE 
Sbjct: 16  EPRLVVEPGVAARVAAIAAPVLQGMGYRLVRIKVSGEAGCTVQIMAERPDGSIQIEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+   E+ ++   +++ 
Sbjct: 76  ISKALSPVLDVADPIDKAYRLEISSPGIDRPLVRRSDFERYAGHLAKIEMAVAHQGRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            G + G  +    L ++     D +E ++ +  + +  ARL++TDEL+  S+
Sbjct: 136 RGVLQGVEDNAVRLHRDDIRNND-DESEVMLVMEDIADARLVLTDELIAESM 186


>gi|259585810|sp|B8IEB0|RIMP_METNO RecName: Full=Ribosome maturation factor rimP
          Length = 203

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 2/181 (1%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM 64
           H      E R+  + G+A  ++ +++P +E + FR V++ +  +    +QI  ER DG M
Sbjct: 7   HHPADAAEKRLITETGVAARVAQIVEPSLEGLGFRLVRVRVTGQNGCTVQIMAERPDGTM 66

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           T+ DCE +S+ ISP+LDV++ I   Y LE+SSPGIDRP+VR  DF RW GH    E+ + 
Sbjct: 67  TVEDCESVSRTISPLLDVDDPIGRAYHLEISSPGIDRPLVRVGDFARWAGHEAKVELTVP 126

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
              +++  G I   +  G  +  +    K+       +    +  A L++TD L+R SL 
Sbjct: 127 LEGRKRFRGIIR--APEGESVRIDLPDAKEGTPASYDLRLRDIGEAHLVLTDALIRESLR 184

Query: 185 N 185
            
Sbjct: 185 R 185


>gi|220924483|ref|YP_002499785.1| hypothetical protein Mnod_4615 [Methylobacterium nodulans ORS 2060]
 gi|219949090|gb|ACL59482.1| protein of unknown function DUF150 [Methylobacterium nodulans ORS
           2060]
          Length = 238

 Score =  118 bits (295), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 2/181 (1%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM 64
           H      E R+  + G+A  ++ +++P +E + FR V++ +  +    +QI  ER DG M
Sbjct: 42  HHPADAAEKRLITETGVAARVAQIVEPSLEGLGFRLVRVRVTGQNGCTVQIMAERPDGTM 101

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           T+ DCE +S+ ISP+LDV++ I   Y LE+SSPGIDRP+VR  DF RW GH    E+ + 
Sbjct: 102 TVEDCESVSRTISPLLDVDDPIGRAYHLEISSPGIDRPLVRVGDFARWAGHEAKVELTVP 161

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
              +++  G I   +  G  +  +    K+       +    +  A L++TD L+R SL 
Sbjct: 162 LEGRKRFRGIIR--APEGESVRIDLPDAKEGTPASYDLRLRDIGEAHLVLTDALIRESLR 219

Query: 185 N 185
            
Sbjct: 220 R 220


>gi|182678036|ref|YP_001832182.1| hypothetical protein Bind_1050 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|259585728|sp|B2IIK0|RIMP_BEII9 RecName: Full=Ribosome maturation factor rimP
 gi|182633919|gb|ACB94693.1| protein of unknown function DUF150 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 314

 Score =  117 bits (293), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 103/179 (57%), Gaps = 6/179 (3%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
           +EPR+  + G+A  ++ +  PV+ ++  R V++ +  +    +QI  ER DG M +  CE
Sbjct: 26  HEPRLLQESGIAARVAVLAAPVLADLGLRLVRVKISGQNGTTVQIMAERPDGTMDVEACE 85

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDVE+ ++  Y LE+SSPGIDRP+VR SDF R  G  V  E+      +++
Sbjct: 86  SVSEALSPVLDVEDPVKQAYHLEISSPGIDRPLVRLSDFERALGQEVRVELKTGLAGRKR 145

Query: 131 L---IGKIMGTSETG---FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               IG I  +S  G     L   +   K   E ++ +  D L  ARL++T++L+R +L
Sbjct: 146 FRGTIGPIEASSPIGGSKGALRLTRTDAKPEEETEVLLPLDDLHEARLVLTEDLIRQAL 204


>gi|163852119|ref|YP_001640162.1| hypothetical protein Mext_2700 [Methylobacterium extorquens PA1]
 gi|218530877|ref|YP_002421693.1| hypothetical protein Mchl_2926 [Methylobacterium chloromethanicum
           CM4]
 gi|259585785|sp|B7KQK1|RIMP_METC4 RecName: Full=Ribosome maturation factor rimP
 gi|259585786|sp|A9W685|RIMP_METEP RecName: Full=Ribosome maturation factor rimP
 gi|163663724|gb|ABY31091.1| protein of unknown function DUF150 [Methylobacterium extorquens
           PA1]
 gi|218523180|gb|ACK83765.1| protein of unknown function DUF150 [Methylobacterium
           chloromethanicum CM4]
          Length = 251

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 99/179 (55%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGRTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ +   Y LEVSSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECEAVSRAISPILDLEDPVGDAYYLEVSSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            +++  G I   S  G  +  +    K     +I +    L  A L++TDEL+R SL  
Sbjct: 121 GRKRFRGIIGVPSADGTTVPIDLPDVKPGLPSRIDVPLRDLGEAHLVLTDELIRESLRR 179


>gi|254561863|ref|YP_003068958.1| hypothetical protein METDI3462 [Methylobacterium extorquens DM4]
 gi|254269141|emb|CAX25105.1| conserved hypothetical protein, UPF0090 protein [Methylobacterium
           extorquens DM4]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 99/179 (55%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGRTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ +   Y LEVSSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECEAVSRAISPILDLEDPVGDAYYLEVSSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            +++  G I   S  G  +  +    K     +I +    L  A L++TDEL+R SL  
Sbjct: 121 GRKRFRGIIGVPSADGTTVPIDLPDVKPGLPSRIDVPLRDLGEAHLVLTDELIRESLRR 179


>gi|188582067|ref|YP_001925512.1| hypothetical protein Mpop_2822 [Methylobacterium populi BJ001]
 gi|259585787|sp|B1ZDR1|RIMP_METPB RecName: Full=Ribosome maturation factor rimP
 gi|179345565|gb|ACB80977.1| protein of unknown function DUF150 [Methylobacterium populi BJ001]
          Length = 255

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 100/179 (55%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGCTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ + G Y LE+SSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECETVSRAISPILDLEDPVGGAYYLEISSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            +++  G +   S  G  +  +    K     +I +    L  A L++TD+L+R SL  
Sbjct: 121 GRKRFRGILGVPSADGATVPIDLPDVKPGLPSRIDLPLRDLGEAHLVLTDDLIRESLRR 179


>gi|146337224|ref|YP_001202272.1| hypothetical protein BRADO0050 [Bradyrhizobium sp. ORS278]
 gi|259585732|sp|A4YJE6|RIMP_BRASO RecName: Full=Ribosome maturation factor rimP
 gi|146190030|emb|CAL74022.1| conserved hypothetical protein; putative YhbC-like protein
           [Bradyrhizobium sp. ORS278]
          Length = 233

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 96/155 (61%), Gaps = 2/155 (1%)

Query: 31  PVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           PV++ M +R V+I +  E    +Q+  ER DG M + DCE +S+A+SP+LD+ + I+  Y
Sbjct: 15  PVLQGMGYRLVRIRISGESGCTVQVMAERPDGTMQIEDCEAVSRALSPVLDIADPIDRAY 74

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
           RLE+SSPGIDRP+VR+SDF R  GH+V  E+ ++  ++++  G I G    G  + ++  
Sbjct: 75  RLEISSPGIDRPLVRRSDFERHVGHLVKIEMAVAYQNRKRFRGIIKGVEGDGVRITRDDV 134

Query: 151 GEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
             KD +   + +    +  A++++TDEL+  S+  
Sbjct: 135 A-KDADP-DVVLPMADIGDAKMVLTDELIAESMRR 167


>gi|115522228|ref|YP_779139.1| hypothetical protein RPE_0199 [Rhodopseudomonas palustris BisA53]
 gi|122298064|sp|Q07V75|RIMP_RHOP5 RecName: Full=Ribosome maturation factor rimP
 gi|115516175|gb|ABJ04159.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           BisA53]
          Length = 272

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 94/151 (62%), Gaps = 4/151 (2%)

Query: 36  MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
           M +R V+I +  E    +QI  ER DG M + DCE +S+A+SP+LDV + I+  YRLEVS
Sbjct: 52  MGYRLVRIKVSGELGCTVQIMAERPDGTMLIEDCEAISKALSPVLDVADPIDKAYRLEVS 111

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK-RGEKD 154
           SPGIDRP+VR+SDF R+ G++V  ++ +    +++  G + G       L++E  RG+ D
Sbjct: 112 SPGIDRPLVRRSDFERYAGYLVKIDMAVPHQGRKRFRGILGGIEGDAVHLQREGVRGDDD 171

Query: 155 MNELQIAISFDSLLSARLIVTDELLRASLNN 185
                + ++ + +  ARL++TDEL+  S+  
Sbjct: 172 P---AVLLTIEDISDARLVLTDELIAESMRR 199


>gi|240139448|ref|YP_002963923.1| hypothetical protein MexAM1_META1p2893 [Methylobacterium extorquens
           AM1]
 gi|240009420|gb|ACS40646.1| conserved hypothetical protein, UPF0090 protein [Methylobacterium
           extorquens AM1]
          Length = 251

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 99/179 (55%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGRTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ +   Y LEVSSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECEAVSRAISPILDLEDPVGDAYYLEVSSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            +++  G I   S  G  +  +    K     +I +    L  A L++TDEL+R SL  
Sbjct: 121 GRKRFRGIIGVPSADGTTVPIDLPDVKPGLLSRIDVPLRDLGEAHLVLTDELIRESLRR 179


>gi|306842730|ref|ZP_07475372.1| Protein of unknown function DUF150 [Brucella sp. BO2]
 gi|306287074|gb|EFM58579.1| Protein of unknown function DUF150 [Brucella sp. BO2]
          Length = 158

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%)

Query: 56  FVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
             ER DG MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH
Sbjct: 1   MAERPDGTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGH 60

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +   E  +    ++KL G+I+        +E ++      NE  + I FD +  ARL++T
Sbjct: 61  IAKVETSIVHEGRKKLRGRIVVGDADSVTIESDQISYG--NEPVVRIPFDLISDARLVLT 118

Query: 176 DELLRASLNN 185
           D+L+R +L  
Sbjct: 119 DDLIRDALRK 128


>gi|312115895|ref|YP_004013491.1| hypothetical protein Rvan_3197 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221024|gb|ADP72392.1| protein of unknown function DUF150 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 221

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 101/172 (58%), Gaps = 6/172 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           R   + G A D++++I+PV+E+M FR V++++ +     +QI  ++ DG + + DC ++S
Sbjct: 21  RFTREFGAAADLAALIEPVLEDMGFRLVRVTMSKRDGATIQIMADKADGAINVDDCAQIS 80

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ISP+LD  + I+  Y LEVSSPGIDR +VR SDF  W G     E+      +++  G
Sbjct: 81  RRISPLLDAHDPIKDRYYLEVSSPGIDRILVRPSDFEDWAGFETKVELKELIDGRKRFRG 140

Query: 134 KIMGTSETGFFLEKE--KRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            + G       L+ +  ++GE       I +  D +  A+L++TDEL+RASL
Sbjct: 141 ILEGYENGEMLLQVQLDEKGEPQT----IGLPVDLIHDAKLVLTDELIRASL 188


>gi|126738453|ref|ZP_01754158.1| hypothetical protein RSK20926_08312 [Roseobacter sp. SK209-2-6]
 gi|126720252|gb|EBA16958.1| hypothetical protein RSK20926_08312 [Roseobacter sp. SK209-2-6]
          Length = 197

 Score =  111 bits (277), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 4/168 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE++ F  V+I L+  K   LQI  ++ +G + + DC E+S A+S  LDVE+
Sbjct: 15  LAEILIPVIEDLGFELVRIRLMSGKTTTLQIMADKPEGGIEVDDCAEISNAVSATLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E     G +++  G++ GT E    
Sbjct: 75  PILDAYSLEVSSPGIDRPLTRMKDFDMFEGYEAKLETEELVGGRRRFKGELAGTEEDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +  E +GE     + I + FD L  A+L++TDEL++  L    +   L
Sbjct: 135 INIEDQGET----VTIGLKFDWLTDAKLVLTDELIKEMLRQRKAAGTL 178


>gi|254450327|ref|ZP_05063764.1| hypothetical protein OA238_928 [Octadecabacter antarcticus 238]
 gi|198264733|gb|EDY89003.1| hypothetical protein OA238_928 [Octadecabacter antarcticus 238]
          Length = 209

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 4/161 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I+ +I P +E++ F  V++ L+  K  +LQI  +R DG + + DC E+S A+S +LDVE+
Sbjct: 26  ITEIITPTVEDLGFEVVRVRLMTGKESILQIMAQRPDGTIEVDDCGEISTAVSALLDVED 85

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I+  + LEVSSPGIDRP+ R  DF++W+G+    E       +++  G + G       
Sbjct: 86  PIKDVFTLEVSSPGIDRPLTRFKDFVQWDGNEAKIETEELIDGRRRFKGMLRGVEGDEVL 145

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +E E +GE     + I + F+ L  A+L++T++L+R  L  
Sbjct: 146 IEIEDKGEP----VTIGLKFEWLTDAKLVLTEDLIRGVLRG 182


>gi|258543557|ref|YP_003188990.1| hypothetical protein APA01_25050 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634635|dbj|BAI00611.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256637691|dbj|BAI03660.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256640745|dbj|BAI06707.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256643800|dbj|BAI09755.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256646855|dbj|BAI12803.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256649908|dbj|BAI15849.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256652898|dbj|BAI18832.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655952|dbj|BAI21879.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 201

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 100/173 (57%), Gaps = 8/173 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM-TLRDCEELSQAISP 78
           GL   ++++I P +E+M +  V++++L  +   +QI  +R DG++  + DCE +S A+  
Sbjct: 19  GLEARVAALIAPAVEDMGYEIVRVAVLGRERPTVQIMADRKDGSLINVEDCERISHAVGA 78

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G + LEVSS GIDRP+ R  D+ R+ GH V  E++L    +++  G ++G+
Sbjct: 79  VLDVEDPIPGAWTLEVSSAGIDRPLTRAKDWNRFAGHQVKAEVLLPVNGRRRFSGTVLGS 138

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
             T   +  +       +  ++A+  + L  ARL++TD L+ AS     S  G
Sbjct: 139 DGTVARMRLD-------DGTEVALPLEELRRARLVLTDALIEASARMVQSAPG 184


>gi|209544213|ref|YP_002276442.1| hypothetical protein Gdia_2067 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|259585817|sp|A9HF10|RIMP_GLUDA RecName: Full=Ribosome maturation factor rimP
 gi|209531890|gb|ACI51827.1| protein of unknown function DUF150 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 207

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 103/173 (59%), Gaps = 8/173 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM-TLRDCEELSQAISP 78
           GL   +++++ PV+ +M F  V++++L  ++  +QI  +R DG +  + DCE++S A+  
Sbjct: 10  GLDAKVAAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVGA 69

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G ++G 
Sbjct: 70  VLDVEDPLPGAWTLEVSSAGIDRPLTRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLG- 128

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
           +E GF   + + G       ++A+    +  ARL++TDEL+ AS +   +  G
Sbjct: 129 AEDGFGRLRLEDG------TEVALPLSDMRRARLVLTDELIAASAHMMRAPGG 175


>gi|255264773|ref|ZP_05344115.1| hypothetical protein TR2A62_2551 [Thalassiobium sp. R2A62]
 gi|255107108|gb|EET49782.1| hypothetical protein TR2A62_2551 [Thalassiobium sp. R2A62]
          Length = 190

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 8/161 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I+ +IQP++E M +  V+I L+  K   LQI  ++ DG + + DC E+S A+S +LDVE+
Sbjct: 14  IAEIIQPMMESMGYELVRIRLMSGKATTLQIMAQKPDGTIEVDDCAEISTAVSALLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF +W G+    E       +++  G++ GT      
Sbjct: 74  PILDAYELEVSSPGIDRPLTRVKDFAQWEGYEAKIETDELIDGRRRFKGQLAGTEGDEIL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +E E        E  I + F+ L  A+L++TD+L+R  L  
Sbjct: 134 IEIE--------EGTIGLKFEWLSDAKLVLTDDLIRDVLRG 166


>gi|254439640|ref|ZP_05053134.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
 gi|198255086|gb|EDY79400.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
          Length = 188

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 95/159 (59%), Gaps = 4/159 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I+ +I P IE++ F  V++ L+  K  +LQI  ++ DG + + DC E+S A+S +LDVE+
Sbjct: 5   ITEIITPTIEDLGFEVVRVRLMTGKESILQIMAQKPDGTIEVDDCGEISTAVSALLDVED 64

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I+  + LEVSSPGIDRP+ R  DF++W+G+    E       +++  G + G       
Sbjct: 65  PIKDVFTLEVSSPGIDRPLTRLKDFVQWDGNEAKIETEELIDGRRRFKGMLRGVEGDEVL 124

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +E E+ GE     + I + F+ L  A+L++T++L+R  L
Sbjct: 125 IEIEENGEP----VTIGLKFEWLTDAKLVLTEDLIRGVL 159


>gi|294675769|ref|YP_003576384.1| hypothetical protein RCAP_rcc00212 [Rhodobacter capsulatus SB 1003]
 gi|294474589|gb|ADE83977.1| protein of unknown function DUF150 [Rhodobacter capsulatus SB 1003]
          Length = 199

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 4/166 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G+   ++ +I P IE + F  V+I +   ++ LLQI  +R +G + + DC  +S A+S +
Sbjct: 9   GIDRRLADIIGPTIEGLGFELVRIRMQGGRHPLLQIMADRPEGGIDVDDCGAISTAVSAV 68

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ IE  Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G + GT 
Sbjct: 69  LDVEDPIEEKYTLEVSSPGIDRPLTRLKDFDVWEGYEARIETEEQIDGRKRFKGILRGTE 128

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +    +E E +GE+    + I + FD L  A+LI+TDEL+   L  
Sbjct: 129 DDEVLIEIENQGEQ----VTIGLKFDWLSDAKLILTDELIAEMLRQ 170


>gi|89067478|ref|ZP_01154991.1| hypothetical protein OG2516_11576 [Oceanicola granulosus HTCC2516]
 gi|89047047|gb|EAR53101.1| hypothetical protein OG2516_11576 [Oceanicola granulosus HTCC2516]
          Length = 197

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 4/161 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I+ +I PVI +M F +V++ L      +LQI  ++ DG + + +C E+S A+S +LDVE+
Sbjct: 14  ITEIIDPVITDMGFETVRVRLQGGNTPVLQIMAQKPDGTIEVDECAEISTAVSAVLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF RW G+V   E       +++  G++ G       
Sbjct: 74  PILDAYTLEVSSPGIDRPLTRLKDFDRWQGYVAKLETTELIDGRRRFKGELGGVEGGEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +E E+ GE     + I + FD L  A+L++TDEL+R  L  
Sbjct: 134 IEIEENGEP----VTIGLQFDWLSDAKLVLTDELIREVLKT 170


>gi|146278787|ref|YP_001168946.1| hypothetical protein Rsph17025_2754 [Rhodobacter sphaeroides ATCC
           17025]
 gi|166988606|sp|A4WW77|RIMP_RHOS5 RecName: Full=Ribosome maturation factor rimP
 gi|145557028|gb|ABP71641.1| protein of unknown function DUF150 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 204

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 7/157 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C ++S A+S +LDVE+
Sbjct: 14  LADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECADISTAVSAVLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT--SETG 142
            IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G++ GT   E  
Sbjct: 74  PIEDNYTLEVSSPGIDRPLTRLKDFDAWAGYEARIETAELIDGRRRFKGELAGTEGDEVL 133

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
             +E  K G      + I + FD L  A+LI+TDEL+
Sbjct: 134 ITIEDGKEG-----FVTIGLKFDWLSDAKLILTDELI 165


>gi|110677787|ref|YP_680794.1| hypothetical protein RD1_0389 [Roseobacter denitrificans OCh 114]
 gi|123065971|sp|Q16D35|RIMP_ROSDO RecName: Full=Ribosome maturation factor rimP
 gi|109453903|gb|ABG30108.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 196

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 8/168 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE+M F  V++ L+  K+ +LQI  +R DG + + DC E+SQA+S +LDVE+
Sbjct: 15  MAEIITPVIEDMGFELVRVRLMSGKSTILQIMADRPDGGIEVDDCAEISQAVSAVLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G  +    
Sbjct: 75  PILDEYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETGDMVDGRRRFKGALAGVEDDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +        ++ E  I + FD L  A+L++TD+L++  L    +   L
Sbjct: 135 I--------NIEEGTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGAL 174


>gi|254475663|ref|ZP_05089049.1| hypothetical protein RR11_1501 [Ruegeria sp. R11]
 gi|214029906|gb|EEB70741.1| hypothetical protein RR11_1501 [Ruegeria sp. R11]
          Length = 196

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 93/168 (55%), Gaps = 4/168 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ F  V+I L+  K   LQI  ++ DG + + DC E+S A+S  LDVE+
Sbjct: 15  LAEIITPVIEDLGFELVRIRLMSGKTTTLQIMADKPDGGIEVDDCAEISNAVSATLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G  E    
Sbjct: 75  PILDAYALEVSSPGIDRPLTRLKDFDMFEGYEAKIETTELIDGRRRFKGELAGVEEDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 135 INIEEHGET----VTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGTL 178


>gi|254465218|ref|ZP_05078629.1| hypothetical protein RBY4I_1824 [Rhodobacterales bacterium Y4I]
 gi|206686126|gb|EDZ46608.1| hypothetical protein RBY4I_1824 [Rhodobacterales bacterium Y4I]
          Length = 196

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 94/159 (59%), Gaps = 4/159 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE++ +  V+I L+  K+  LQI  ++ +G + + DC E+S A+S  LDVE+
Sbjct: 15  LAEIVTPVIEDLGYELVRIRLMSGKSTTLQIMADKPNGGIEVDDCAEISNAVSAALDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E   + G +++  G++ GT      
Sbjct: 75  PIIDAYALEVSSPGIDRPLTRMKDFEMFEGYEAKLETAETVGGRRRFKGELAGTEGDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +  E +G+     + + + FD L  A+L++TD+L++  L
Sbjct: 135 INIEDQGQT----VTVGLKFDWLSDAKLVLTDDLIKEML 169


>gi|84684620|ref|ZP_01012521.1| hypothetical protein 1099457000260_RB2654_13384 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667599|gb|EAQ14068.1| hypothetical protein RB2654_13384 [Rhodobacterales bacterium
           HTCC2654]
          Length = 194

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 4/161 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +++PVIE+M +  V++ L       LQI  ++ +G + + D   ++ A+   LDVE+
Sbjct: 14  LADIVRPVIEDMGYELVRLRLQGGNTQTLQIMADKPEGGIEVDDLSAINTALGATLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            IEG Y LEVSSPGIDRP+ R  DF  W+G +   E       +++  G + GT +    
Sbjct: 74  PIEGEYNLEVSSPGIDRPLTRYKDFDTWDGWIAKVETSELIEGRKRFKGTLQGTEDGEIL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +E E +GE     + I ++FD L  A+L++TDEL+   L  
Sbjct: 134 IEIEDKGEP----VTIGLTFDLLADAKLVLTDELIAEMLKQ 170


>gi|329113269|ref|ZP_08242052.1| Ribosome maturation factor RimP [Acetobacter pomorum DM001]
 gi|326697410|gb|EGE49068.1| Ribosome maturation factor RimP [Acetobacter pomorum DM001]
          Length = 201

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 8/164 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM-TLRDCEELSQAISP 78
           GL   ++++I P +E+M +  V++++L  +   +QI  +R DG++  + DCE +S A+  
Sbjct: 19  GLEARVAALIAPAVEDMGYEIVRVAVLGRERPTVQIMADRKDGSLINVEDCERISHAVGA 78

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G + LEVSS GIDRP+ R  D+ R+ GH    E++L    +++  G ++G+
Sbjct: 79  VLDVEDPIPGAWTLEVSSAGIDRPLTRAKDWNRFAGHQAKAEVLLPVNGRRRFSGVVLGS 138

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
             T   +  +       +  ++A+  + L  ARL++TD L+ AS
Sbjct: 139 DGTVARMRLD-------DGTEVALPLEELRRARLVLTDALIEAS 175


>gi|161170253|gb|ABX59223.1| uncharacterized protein conserved in bacteria [uncultured marine
           bacterium EB000_55B11]
 gi|297183782|gb|ADI19905.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
          Length = 222

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 8/158 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++S++QPVIE++ +  V+I L+  K   LQI  ++ +G + + DC ++S  IS ILDVE+
Sbjct: 53  MASIVQPVIEDLGYELVRIRLMSGKATTLQIMADKPNGGIDVNDCSKISTEISAILDVED 112

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            IE  Y LEVSSPG+DRP+ R  DF  WNG  +  E       +++  G   G  +    
Sbjct: 113 PIEAEYALEVSSPGMDRPLTRLKDFQTWNGFEIKVETSELIDGQRRFKGLSRGIEDNDVL 172

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +E        + +  I + F+ L  A+L++TDEL+ AS
Sbjct: 173 IE--------IPQGTIGLDFEWLSDAKLVLTDELVAAS 202


>gi|114769757|ref|ZP_01447367.1| hypothetical protein OM2255_09321 [alpha proteobacterium HTCC2255]
 gi|114549462|gb|EAU52344.1| hypothetical protein OM2255_09321 [alpha proteobacterium HTCC2255]
          Length = 183

 Score =  107 bits (267), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 8/158 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++S++QPVIE++ +  V+I L+  K   LQI  ++ +G + + DC ++S  IS ILDVE+
Sbjct: 14  MASIVQPVIEDLGYELVRIRLMSGKATTLQIMADKPNGGIDVNDCSKISTEISAILDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            IE  Y LEVSSPG+DRP+ R  DF  WNG  +  E       +++  G   G  +    
Sbjct: 74  PIEAEYALEVSSPGMDRPLTRLKDFQTWNGFEIKVETSELIDGQRRFKGLSRGIEDNDVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +E        + +  I + F+ L  A+L++TDEL+ AS
Sbjct: 134 IE--------IPQGTIGLDFEWLSDAKLVLTDELVAAS 163


>gi|83313173|ref|YP_423437.1| hypothetical protein amb4074 [Magnetospirillum magneticum AMB-1]
 gi|123540593|sp|Q2VZU7|RIMP_MAGSA RecName: Full=Ribosome maturation factor rimP
 gi|82948014|dbj|BAE52878.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
           magneticum AMB-1]
          Length = 166

 Score =  107 bits (267), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 10/170 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M L   + ++I P ++ M +  V++ L  ++ L LQI  +R DG  M + DC ++S+++S
Sbjct: 1   MDLQSRLEALIAPSLDAMGYELVRVQLQGKQRLTLQIMADRKDGVMMAVDDCADISRSVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ R  DF+ W G     E       +++  GK++G
Sbjct: 61  ALLDVEDPISAAYTLEVSSPGIDRPLTRAKDFVAWAGFEAKMESCQPIDGRKRFRGKLLG 120

Query: 138 TSETG--FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
             E G    L  E  GE       IAI    +  A+L++TDEL+ A+L +
Sbjct: 121 LDEAGVNVRLVIEAAGE-------IAIPLADVRGAKLVLTDELIAATLKD 163


>gi|83595107|ref|YP_428859.1| hypothetical protein Rru_A3778 [Rhodospirillum rubrum ATCC 11170]
 gi|91208354|sp|Q2RMS3|RIMP_RHORT RecName: Full=Ribosome maturation factor rimP
 gi|83578021|gb|ABC24572.1| Protein of unknown function DUF150 [Rhodospirillum rubrum ATCC
           11170]
          Length = 225

 Score =  107 bits (267), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 3/176 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAI 76
           D  + G +  ++ P ++ M +  V+++LL  +N  LQ+  ER DG  MT+ DCE +S+A+
Sbjct: 35  DARMMGHLEKLLAPTLDAMGYEVVRVTLLGSQNPTLQVMAERLDGVAMTVSDCETISRAL 94

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             +LDVE+ I G Y LE+SSPGIDRP+ R  D+ R+ GH    E        +++ G ++
Sbjct: 95  GALLDVEDPIAGRYSLEISSPGIDRPLTRPKDYARFAGHEARIETDRLIEGHRRMKGLLL 154

Query: 137 GTSE--TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           G  E  T      E +  +D    ++ I F +++ A+L++TD L+  +L +  + A
Sbjct: 155 GIDEDRTVRLRLIEGKAAEDGTLPEVEIPFGAIVKAKLLLTDALIAKALKDAEALA 210


>gi|162147157|ref|YP_001601618.1| hypothetical protein GDI_1362 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785734|emb|CAP55305.1| conserved protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 193

 Score =  107 bits (267), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 101/168 (60%), Gaps = 8/168 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM-TLRDCEELSQAISPILDVE 83
           +++++ PV+ +M F  V++++L  ++  +QI  +R DG +  + DCE++S A+  +LDVE
Sbjct: 1   MAAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVGAVLDVE 60

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G ++G +E GF
Sbjct: 61  DPLPGAWTLEVSSAGIDRPLTRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLG-AEDGF 119

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
              + + G       ++A+    +  ARL++TDEL+ AS +   +  G
Sbjct: 120 GRLRLEDG------TEVALPLSDMRRARLVLTDELIAASAHMMRAPGG 161


>gi|296114400|ref|ZP_06833054.1| hypothetical protein GXY_01428 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979161|gb|EFG85885.1| hypothetical protein GXY_01428 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 210

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 99/164 (60%), Gaps = 8/164 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISP 78
           GL   I+ +I P + +M F  V+++++  ++  +QI  +R DG+ +T+ DCE++S A+  
Sbjct: 10  GLDARIADMIGPALVDMGFELVRVAVMGRESPTVQIMADRADGSQITINDCEQISHAVGA 69

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILDVE+ + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G ++G 
Sbjct: 70  ILDVEDPLSGEWTLEVSSAGIDRPLTRPKDWDRYAGHLAKAEMNMPVDGRKRFSGIVLGA 129

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
            + G  L +   G       ++A+ F+ +  ARL++TD L+ AS
Sbjct: 130 RD-GHGLMRLDDG------AEVALPFEEMRKARLVLTDALIEAS 166


>gi|330991198|ref|ZP_08315150.1| Ribosome maturation factor rimP [Gluconacetobacter sp. SXCC-1]
 gi|329761691|gb|EGG78183.1| Ribosome maturation factor rimP [Gluconacetobacter sp. SXCC-1]
          Length = 227

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 98/164 (59%), Gaps = 8/164 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM-TLRDCEELSQAISP 78
           GL   I++++ P + +M F  V++++L  ++  +QI  +R DG +  + DCE++S A+  
Sbjct: 21  GLDARIAAMVAPALADMGFDLVRVAVLGRESPTVQIMADRADGTLIAIEDCEQISHAVGA 80

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILDVE+ + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G ++G 
Sbjct: 81  ILDVEDPLPGAWTLEVSSAGIDRPLTRAKDWERFAGHLARAEMNMPIEGRKRFAGIVLGA 140

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
            + G  L +   G       ++A+ F  +  ARL++TDEL+ AS
Sbjct: 141 RD-GHGLMRLDDG------TEVALPFAEMRKARLVLTDELIEAS 177


>gi|221640657|ref|YP_002526919.1| hypothetical protein RSKD131_2558 [Rhodobacter sphaeroides KD131]
 gi|254765045|sp|B9KPN3|RIMP_RHOSK RecName: Full=Ribosome maturation factor rimP
 gi|221161438|gb|ACM02418.1| Hypothetical Protein RSKD131_2558 [Rhodobacter sphaeroides KD131]
          Length = 204

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 7/157 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S A+S  LDVE+
Sbjct: 14  LADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEISTAVSAALDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT--SETG 142
            IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G++ GT   E  
Sbjct: 74  PIEENYTLEVSSPGIDRPLTRLKDFDVWTGYEARIETTELIDGRRRFKGELAGTEGDEVL 133

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
             +E  + G      + I + FD L  A+LI+T+EL+
Sbjct: 134 ITIEDGRDG-----YVTIGLKFDWLADAKLILTEELI 165


>gi|163733004|ref|ZP_02140448.1| hypothetical protein RLO149_10100 [Roseobacter litoralis Och 149]
 gi|161393539|gb|EDQ17864.1| hypothetical protein RLO149_10100 [Roseobacter litoralis Och 149]
          Length = 231

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE+M F  V++ L+  K+ +LQI  ++ DG + + DC E+SQA+S +LDVE+
Sbjct: 50  MAEIITPVIEDMGFELVRVRLMSGKSTILQIMADKPDGGIEVDDCAEISQAVSAVLDVED 109

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G       
Sbjct: 110 PILDEYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETGEMIDGRRRFKGALAGVENDEVL 169

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +  E        E  I + FD L  A+L++TD+L++  L
Sbjct: 170 INVE--------EGTIGLKFDWLSDAKLVLTDDLIKEML 200


>gi|77464743|ref|YP_354247.1| hypothetical protein RSP_1162 [Rhodobacter sphaeroides 2.4.1]
 gi|91208409|sp|Q3IYN8|RIMP_RHOS4 RecName: Full=Ribosome maturation factor rimP
 gi|77389161|gb|ABA80346.1| hypothetical protein RSP_1162 [Rhodobacter sphaeroides 2.4.1]
          Length = 204

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S A+S  LDVE+
Sbjct: 14  LADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEISTAVSAALDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G++ GT      
Sbjct: 74  PIEENYTLEVSSPGIDRPLTRLKDFEVWTGYEARIETTELIDGRRRFKGELAGTEGDEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           +  E   +   + + I + FD L  A+LI+T+EL+
Sbjct: 134 ITIEDGRD---SYVTIGLKFDWLADAKLILTEELI 165


>gi|126463583|ref|YP_001044697.1| hypothetical protein Rsph17029_2823 [Rhodobacter sphaeroides ATCC
           17029]
 gi|166988525|sp|A3PNK9|RIMP_RHOS1 RecName: Full=Ribosome maturation factor rimP
 gi|126105247|gb|ABN77925.1| protein of unknown function DUF150 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 204

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S A+S  LDVE+
Sbjct: 14  LADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEISTAVSAALDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G++ GT      
Sbjct: 74  PIEENYTLEVSSPGIDRPLTRLKDFDVWTGYEARIETTELIDGRRRFKGELAGTEGDEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           +  E   +   + + I + FD L  A+LI+T+EL+
Sbjct: 134 ITIEDGRD---SYVTIGLKFDWLADAKLILTEELI 165


>gi|288959697|ref|YP_003450038.1| hypothetical protein AZL_028560 [Azospirillum sp. B510]
 gi|288912005|dbj|BAI73494.1| hypothetical protein AZL_028560 [Azospirillum sp. B510]
          Length = 166

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 95/165 (57%), Gaps = 9/165 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
           M   G I  +I P +E M +  V++ +   +  +LQI  ER DG  MT+ DC ++S+++S
Sbjct: 1   MDATGRIEQIITPSVEAMGYEVVRVQISGGQRAVLQIMAERADGAPMTVEDCADISRSVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ R  DF R+ G     E  ++   +++  G + G
Sbjct: 61  ALLDVEDPIREAYTLEVSSPGIDRPLTRLKDFERFAGFEARLESRMAIDGRKRFKGMLKG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
             +    ++ E+   +        + FD++L A+L++TD+L+RAS
Sbjct: 121 VEDGLVCIDTEQGAAR--------LEFDNILRAKLVLTDDLIRAS 157


>gi|84514879|ref|ZP_01002242.1| hypothetical protein SKA53_11683 [Loktanella vestfoldensis SKA53]
 gi|84511038|gb|EAQ07492.1| hypothetical protein SKA53_11683 [Loktanella vestfoldensis SKA53]
          Length = 191

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 8/159 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I+ +I PVIE+M F  V++ L+  K   LQI V+R DG + +  C ++S AIS +LDVE+
Sbjct: 14  IAEIITPVIEDMGFEVVRVRLMTGKESTLQIMVQRPDGTIEVDQCAQISTAISAVLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF +W G     E       +++  G++ G       
Sbjct: 74  PIVDVYTLEVSSPGIDRPLTRLKDFDQWKGFEAKIETEELIDGRRRFKGELAGIDGDEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +        D++E  I + F  L  A+L++TD+L+R  L
Sbjct: 134 I--------DIDEGTIGLKFAWLSDAKLVLTDDLIRDVL 164


>gi|332559636|ref|ZP_08413958.1| ribosome maturation protein RimP [Rhodobacter sphaeroides WS8N]
 gi|332277348|gb|EGJ22663.1| ribosome maturation protein RimP [Rhodobacter sphaeroides WS8N]
          Length = 204

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 3/155 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S A+S  LDVE+
Sbjct: 14  LADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEISTAVSAALDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G++ GT      
Sbjct: 74  PIEENYTLEVSSPGIDRPLTRLKDFDVWTGYEARIETTELIDGRRRFKGELAGTEGDEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           +  E   +   + + I + FD L  A+LI+T+EL+
Sbjct: 134 ITIEDGRD---SYVTIGLKFDWLSDAKLILTEELI 165


>gi|144897847|emb|CAM74711.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 171

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 11/165 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M L   + ++  P +E M +  V++      +  LQ+  ER DG NMT+ DC ++S+++S
Sbjct: 1   MDLQQRLEALFAPTLEAMGYEMVRVMFQGRSHPTLQVMAERKDGRNMTVDDCADISRSLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I+  Y LEVSSPGIDRP+ R  DF+ W G  V  E ++    +++  GK++G
Sbjct: 61  ALLDVEDPIQSAYALEVSSPGIDRPLTRAKDFITWAGFEVKLEALVGVDGRKRFRGKLLG 120

Query: 138 TSETGFFLEKEK-RGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
                  LE E  R   D  E+ + ++   L SA+L++TDEL+ A
Sbjct: 121 -------LEGEAVRLFADGAEVSVPLT--DLKSAKLVLTDELIAA 156


>gi|126734453|ref|ZP_01750200.1| hypothetical protein RCCS2_09839 [Roseobacter sp. CCS2]
 gi|126717319|gb|EBA14183.1| hypothetical protein RCCS2_09839 [Roseobacter sp. CCS2]
          Length = 192

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 90/161 (55%), Gaps = 8/161 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I+ +I PV+E+M F  V++ L+  K  +LQ+ V+R DG + + +C ++S A+S ILDVE+
Sbjct: 15  IAEIITPVVEDMGFEVVRVRLMTGKESILQVMVQRPDGQIEVDECGQVSTALSAILDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF +W G     E       +++  G + GT      
Sbjct: 75  PILDVYTLEVSSPGIDRPLTRMKDFDQWEGFEAKIETDELIDGRRRFKGPLAGTEGDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +         + E  I + F+ L  A+L++TDEL+R  L  
Sbjct: 135 IT--------IAEGTIGLKFEWLSDAKLVLTDELIRDVLRG 167


>gi|99082749|ref|YP_614903.1| hypothetical protein TM1040_2909 [Ruegeria sp. TM1040]
 gi|122397499|sp|Q1GCH5|RIMP_SILST RecName: Full=Ribosome maturation factor rimP
 gi|99039029|gb|ABF65641.1| protein of unknown function DUF150 [Ruegeria sp. TM1040]
          Length = 203

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 4/159 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ +  V+I L+  K   LQI  +R DG + + DC  +S A+S  LDVE+
Sbjct: 15  LAEIITPVIEDLGYELVRIRLMSGKTTTLQIMADRPDGGIEVDDCAAISNAVSATLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G  +    
Sbjct: 75  PILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRRFKGELAGIEDDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +  E+ GE     + I + FD L  A+L++TD+L++  L
Sbjct: 135 INIEEHGET----VTIGLKFDWLSDAKLVLTDDLIKEML 169


>gi|259417818|ref|ZP_05741737.1| hypothetical protein SCH4B_3234 [Silicibacter sp. TrichCH4B]
 gi|259346724|gb|EEW58538.1| hypothetical protein SCH4B_3234 [Silicibacter sp. TrichCH4B]
          Length = 244

 Score =  104 bits (260), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 4/159 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ +  V+I L+  K   LQI  +R DG + + DC  +S A+S  LDVE+
Sbjct: 56  LAEIITPVIEDLGYELVRIRLMSGKATTLQIMADRPDGGIEVDDCAAISNAVSATLDVED 115

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G  +    
Sbjct: 116 PILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRRFKGELAGIEDDEVL 175

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +  E+ GE     + I + FD L  A+L++TD+L++  L
Sbjct: 176 INIEEHGET----VTIGLKFDWLSDAKLVLTDDLIKEML 210


>gi|163796765|ref|ZP_02190723.1| hypothetical protein BAL199_13523 [alpha proteobacterium BAL199]
 gi|159178019|gb|EDP62566.1| hypothetical protein BAL199_13523 [alpha proteobacterium BAL199]
          Length = 179

 Score =  104 bits (260), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 7/159 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVE 83
           I S+I P IE M +  V++ +   +   LQI  ER DG+ M + DC E+S++IS ILDVE
Sbjct: 14  IESIIGPSIEAMGYALVRVMITGGRRPTLQIMAERADGSGMNVDDCAEISRSISAILDVE 73

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G Y LEVSSPGIDRP+ R  DF R+ G     ++      +++  G+++G  +   
Sbjct: 74  DPITGEYTLEVSSPGIDRPLTRLDDFRRFAGFEARIDMAELIEGRKRFGGRLIGVDDADR 133

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
            L +   G ++      A+ F+ +  A+L++TDEL+ AS
Sbjct: 134 VLLETAPGVRE------ALPFEGIARAKLVLTDELVAAS 166


>gi|114329059|ref|YP_746216.1| hypothetical protein GbCGDNIH1_2395 [Granulibacter bethesdensis
           CGDNIH1]
 gi|122325995|sp|Q0BPF9|RIMP_GRABC RecName: Full=Ribosome maturation factor rimP
 gi|114317233|gb|ABI63293.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1]
          Length = 178

 Score =  104 bits (259), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 98/165 (59%), Gaps = 9/165 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMT-LRDCEELSQAISPILDVE 83
           I+ +I P + +M F  V++++L  +   +QI  +R DG++  + DCE +S A   +LDVE
Sbjct: 12  IAGLIAPGLADMGFELVRVAVLGREQPTVQIMADRADGSLIGIDDCEAISHAAGALLDVE 71

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI-VLSSGDKQKLIGKIMGTSETG 142
           ++I+  + LEVSS GIDRP+ R  D++R+ GH+   E+ +   G +++  G ++G  ET 
Sbjct: 72  DVIQSTWNLEVSSAGIDRPLTRVKDWVRFAGHLAKVEMSIPGPGGRRRFSGTVLGADETA 131

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
             L  +  GE      ++++  D L  A+L++TD L+ A+  + G
Sbjct: 132 ARLRLDD-GE------EVSLPMDGLKKAKLVLTDALIDATAQDAG 169


>gi|23016101|ref|ZP_00055861.1| COG0779: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 165

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 9/169 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M L   + ++I P ++ M +  V++ L  ++ L LQI  +R DG  M + DC ++S+++S
Sbjct: 1   MDLQSRLEALIAPSLDAMGYELVRVQLQGKQRLTLQIMADRKDGVMMAVDDCADISRSVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ R  DF  W G     E       +++  GK++G
Sbjct: 61  ALLDVEDPISAAYTLEVSSPGIDRPLTRAKDFAAWAGFEAKMESCQPIDGRKRFRGKLLG 120

Query: 138 TSETGFFLE-KEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
             ETG  +    + GE       ++I    +  A+L++TDEL+ A++ +
Sbjct: 121 LDETGAHVRLAVETGE-------VSIPLADVRGAKLVLTDELIAATVKD 162


>gi|149912924|ref|ZP_01901458.1| hypothetical protein RAZWK3B_03010 [Roseobacter sp. AzwK-3b]
 gi|149813330|gb|EDM73156.1| hypothetical protein RAZWK3B_03010 [Roseobacter sp. AzwK-3b]
          Length = 190

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 8/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE+M F  V++ L+  K  LLQI  ER +G + + DC ++S A+S +LDVE+
Sbjct: 15  LAEIITPVIEDMGFELVRVRLMGGKTHLLQIMAERPEGGIEVDDCAKISNAVSAVLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G  +    
Sbjct: 75  PVTDPYTLEVSSPGIDRPLTRLKDFADFEGYEAKIETSELIDGRKRFKGVLAGVEDDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           +        ++ E  + + FD L  A+L++TDEL++  L 
Sbjct: 135 I--------NIEEGTVGLKFDWLSDAKLVLTDELIKEMLK 166


>gi|310817129|ref|YP_003965093.1| Ribosome maturation factor rimP [Ketogulonicigenium vulgare Y25]
 gi|308755864|gb|ADO43793.1| Ribosome maturation factor rimP [Ketogulonicigenium vulgare Y25]
          Length = 218

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 96/179 (53%), Gaps = 16/179 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP------ 78
           ++ ++QPVIE+M F  V+I ++  K   LQI  ++ DG + + DC  +S A+S       
Sbjct: 14  VAEIVQPVIEDMGFELVRIRVMTGKETTLQIMAQKPDGTIEVDDCAAISTAVSAGLDPPP 73

Query: 79  -----ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
                +LDVE+ I  +Y LEVSSPGIDRP+ R  DF  W+G+    E       +++  G
Sbjct: 74  PAVSAVLDVEDPIVENYTLEVSSPGIDRPLTRLKDFDLWDGYTAKIETEELIDGRRRFKG 133

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           ++ GT      +E +   E     + I + F+ L  A+L++TDEL+R  L      AGL
Sbjct: 134 ELRGTEGDEILIELDDAAEP----VTIGLKFEWLSDAKLVLTDELIRDVLRGRKD-AGL 187


>gi|163742657|ref|ZP_02150043.1| hypothetical protein RG210_07209 [Phaeobacter gallaeciensis 2.10]
 gi|161384242|gb|EDQ08625.1| hypothetical protein RG210_07209 [Phaeobacter gallaeciensis 2.10]
          Length = 196

 Score =  103 bits (258), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 4/168 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ F  V+I L+  K   LQI  ++ DG + +  C E+S A+S  LDVE+
Sbjct: 15  LAEIITPVIEDLGFELVRIRLMSGKTTTLQIMADKPDGGIEVDGCAEISNAVSATLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G  +    
Sbjct: 75  PILDSYALEVSSPGIDRPLTRLKDFEMFEGYEAKIETSELIDGRRRFKGELAGVEDDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 135 INIEEHGET----ITIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGTL 178


>gi|89052532|ref|YP_507983.1| hypothetical protein Jann_0041 [Jannaschia sp. CCS1]
 gi|122499897|sp|Q28WF4|RIMP_JANSC RecName: Full=Ribosome maturation factor rimP
 gi|88862081|gb|ABD52958.1| protein of unknown function DUF150 [Jannaschia sp. CCS1]
          Length = 194

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 5/168 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ P IE + F  V+I ++  K   LQI  ER DG + + +C ++S AIS +LDVE+
Sbjct: 14  MAEIVTPSIEALGFEVVRIRVMGGKTNTLQIMAERPDGGIDVDECAQISNAISVLLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +E  Y LEVSSPGIDRP+ R  DF  + G+    E     G +++  G + G  +    
Sbjct: 74  PLEDAYALEVSSPGIDRPLTRLKDFETFEGYEAKLETTEMIGGQRRFKGVLAGVEDDEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +  E+  E     + + ++FD L  A+L++TDEL++  L      AGL
Sbjct: 134 VNLEQGSET----VTVGLNFDWLSDAKLVLTDELIKEMLKQRKD-AGL 176


>gi|126724628|ref|ZP_01740471.1| hypothetical protein RB2150_12371 [Rhodobacterales bacterium
           HTCC2150]
 gi|126705792|gb|EBA04882.1| hypothetical protein RB2150_12371 [Rhodobacterales bacterium
           HTCC2150]
          Length = 228

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 8/161 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +++++ PVIE++    V++ L+  K  +LQI VE+ +G + + DC ++S A+S  LDVE+
Sbjct: 52  MANIVTPVIEDLGCELVRVRLMTGKENILQIMVEKPEGGIEVDDCAKVSTAVSATLDVED 111

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  W+G+    E       +++  G++ GT +    
Sbjct: 112 PILDAYNLEVSSPGIDRPLTRLKDFDMWDGYEAKIETSELIDGRRRFKGQLAGTQDDEVL 171

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +  E        E  I + F+ L  A+L++TDEL+R  L +
Sbjct: 172 ITIE--------EGTIGLKFEWLSDAKLVLTDELIRDVLRS 204


>gi|163737948|ref|ZP_02145364.1| hypothetical protein RGBS107_06039 [Phaeobacter gallaeciensis
           BS107]
 gi|161388564|gb|EDQ12917.1| hypothetical protein RGBS107_06039 [Phaeobacter gallaeciensis
           BS107]
          Length = 196

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ F  V+I L+  K   LQI  ++ DG + +  C E+S A+S  LDVE+
Sbjct: 15  LAEIITPVIEDLGFELVRIRLMSGKTTTLQIMADKPDGGIEVDGCAEISNAVSATLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G       
Sbjct: 75  PILDSYALEVSSPGIDRPLTRLKDFEMFEGYEAKIETSELIDGRRRFKGELAGVEGDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 135 INIEEHGET----ITIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGTL 178


>gi|163745073|ref|ZP_02152433.1| hypothetical protein OIHEL45_05780 [Oceanibulbus indolifex HEL-45]
 gi|161381891|gb|EDQ06300.1| hypothetical protein OIHEL45_05780 [Oceanibulbus indolifex HEL-45]
          Length = 192

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 8/161 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE+M F  V++ L+  K+ +LQ+  +R DG + + +C ++SQAI  +LDVE+
Sbjct: 15  LAEIITPVIEDMGFELVRVRLMSGKSTILQVMADRPDGGIEVDECAKISQAIGAVLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G  E G  
Sbjct: 75  PILDEYALEVSSPGIDRPLTRLKDFDAFEGYEAKIETTELIDGRRRFKGELAGV-EGGEV 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           L        ++ E  I + FD L  A+L++TD+L++  L  
Sbjct: 134 L-------INVEEGTIGLQFDWLSDAKLLLTDDLIKEMLRQ 167


>gi|154254056|ref|YP_001414880.1| hypothetical protein Plav_3625 [Parvibaculum lavamentivorans DS-1]
 gi|259586173|sp|A7HZ90|RIMP_PARL1 RecName: Full=Ribosome maturation factor rimP
 gi|154158006|gb|ABS65223.1| protein of unknown function DUF150 [Parvibaculum lavamentivorans
           DS-1]
          Length = 207

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 4/170 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G+A  +   ++   E   F  V++    +    LQI  ER DG+MT+ DC ELS+ +S +
Sbjct: 29  GVARRVFEQLRAPAEGAGFEIVRVRFGVQDGQTLQIMAERPDGSMTVEDCAELSRMLSAL 88

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I G Y LE+SS GIDRP+ R  DF RW+G  V   +      +++  G + G  
Sbjct: 89  LDVEDPIPGEYHLEISSAGIDRPLTRPKDFERWSGFEVKVGLSEPLSGRKRFRGILQGVE 148

Query: 140 ETGFFLEKEKRGEKDMNELQI-AISFDSLLSARLIVTDELLRASLNNYGS 188
           +    +E +  G    +E Q+  + F  L  A+L+++D+L+R SL   G 
Sbjct: 149 DDEVLVECDIEG---FSEPQVLGLPFRQLSEAKLVMSDDLIRESLKRQGP 195


>gi|159046100|ref|YP_001534894.1| hypothetical protein Dshi_3560 [Dinoroseobacter shibae DFL 12]
 gi|189040162|sp|A8LQ53|RIMP_DINSH RecName: Full=Ribosome maturation factor rimP
 gi|157913860|gb|ABV95293.1| protein of unknown function DUF150 [Dinoroseobacter shibae DFL 12]
          Length = 196

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 8/161 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I++++ PVIE++ +  V++ ++  K+  LQI  E+ +G + + DC  +S  +S  LDVE+
Sbjct: 14  IAALVTPVIEDLGYELVRLRVMSGKSPTLQIMAEKPEGGIEVDDCARISTEVSATLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G + GT      
Sbjct: 74  PIEDNYTLEVSSPGIDRPLTRLKDFDTWVGYEAKIETTELIEGRRRFKGALAGTEGDEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +E        + E  I + F+ L  A+L++TD+L+R  L  
Sbjct: 134 IE--------IEEGTIGLKFEWLSDAKLVLTDDLIRDVLKG 166


>gi|260576185|ref|ZP_05844178.1| protein of unknown function DUF150 [Rhodobacter sp. SW2]
 gi|259021665|gb|EEW24968.1| protein of unknown function DUF150 [Rhodobacter sp. SW2]
          Length = 199

 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 8/161 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ P IE + F  V+I L+  K   LQI  ER DG + + +C  +S A+S ILDVE+
Sbjct: 14  LAEIVTPAIEGLGFELVRIRLMGGKVRTLQIMAERPDGGIVVDECAAISTAVSAILDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +E +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G++ G       
Sbjct: 74  PVEENYILEVSSPGIDRPLTRLKDFDTWQGYEARIETTELIDGRRRFKGELRGIQGDEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +E        + E  I + FD L  A+L++TDEL+   L  
Sbjct: 134 IE--------IEEGIIGLQFDWLSDAKLVLTDELIAEMLRQ 166


>gi|119385318|ref|YP_916374.1| hypothetical protein Pden_2591 [Paracoccus denitrificans PD1222]
 gi|259586172|sp|A1B584|RIMP_PARDP RecName: Full=Ribosome maturation factor rimP
 gi|119375085|gb|ABL70678.1| protein of unknown function DUF150 [Paracoccus denitrificans
           PD1222]
          Length = 206

 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 90/159 (56%), Gaps = 8/159 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ F  V+I L   K   LQI  +R +G + + DC ++S A+S ILDVE+
Sbjct: 14  LAEIISPVIEDLGFELVRIRLQGGKTATLQIMADRPEGGINVDDCADISTAVSAILDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT--SETG 142
            +E  Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G    E G
Sbjct: 74  PLEDAYHLEVSSPGIDRPLTRLKDFETFEGYEARLETNQPIDGRKRFKGVLAGVEKGEGG 133

Query: 143 --FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
               L  E+ GE       I ++FD L  A+L++TDEL+
Sbjct: 134 DEVLLNIEEGGETQT----IGLNFDWLSDAKLVLTDELI 168


>gi|126728007|ref|ZP_01743823.1| hypothetical protein SSE37_18492 [Sagittula stellata E-37]
 gi|126710972|gb|EBA10022.1| hypothetical protein SSE37_18492 [Sagittula stellata E-37]
          Length = 189

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 8/166 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE+M F  V++ L      LLQI  ER +G + + +C E+S A+S +LDVE+
Sbjct: 14  LAEIVAPVIEDMGFELVRLRLQSGNTPLLQIMAERPEGGIEVDECAEISTAVSAVLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G   +   
Sbjct: 74  PIVEAYTLEVSSPGIDRPLTRLKDFDTYEGYEARLETTDLIEGRKRFRGILAGVEGSEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           +        +++E  I + FD L  A+L++TDEL+R  L    + A
Sbjct: 134 I--------NVDEGTIGLQFDWLADAKLVMTDELVREMLKARKTAA 171


>gi|86136806|ref|ZP_01055384.1| hypothetical protein MED193_14067 [Roseobacter sp. MED193]
 gi|85826130|gb|EAQ46327.1| hypothetical protein MED193_14067 [Roseobacter sp. MED193]
          Length = 196

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 93/168 (55%), Gaps = 4/168 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE++ +  V+I L+  K   LQI  ++ +G + + DC  +S A+S  LDVE+
Sbjct: 15  LAEILIPVIEDLGYELVRIRLMSGKTTTLQIMADKPEGGIEVDDCAVVSSAVSATLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E     G +++  G++ GT E    
Sbjct: 75  PILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETDELVGGRRRFKGELAGTEEDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +  E +G+     + I + FD L  A+L++TD+L+   L    +   L
Sbjct: 135 INIEDQGKT----VTIGLKFDWLSDAKLVLTDDLITEMLRQRKAAGTL 178


>gi|260429224|ref|ZP_05783201.1| hypothetical protein CSE45_3569 [Citreicella sp. SE45]
 gi|260419847|gb|EEX13100.1| hypothetical protein CSE45_3569 [Citreicella sp. SE45]
          Length = 198

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 4/160 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE+M F  V+I L+  K   LQI  ER +G + + +C ++S A+S +LDVE+
Sbjct: 14  LAEIVAPVIEDMGFELVRIRLMGGKTATLQIMAERPEGGIEIDECGDISTAVSAVLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEV SPGIDRP+ R  DF  + G+    +       +++  G + G       
Sbjct: 74  PILDSYVLEVGSPGIDRPLTRLKDFETFEGYDAKIQTDELIDGRKRWQGVLAGVEGGEVL 133

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           L  E+ GE       I + FD L  A+LI+TDEL+R  L 
Sbjct: 134 LNIEENGETQT----IGLQFDWLSDAKLILTDELMREMLR 169


>gi|114762089|ref|ZP_01441557.1| hypothetical protein 1100011001331_R2601_14160 [Pelagibaca
           bermudensis HTCC2601]
 gi|114545113|gb|EAU48116.1| hypothetical protein R2601_14160 [Roseovarius sp. HTCC2601]
          Length = 195

 Score =  100 bits (250), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 7/162 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE++ F  V++ L+  K   LQI  ER +G + + +C ++S A+S +LDVE+
Sbjct: 14  LAEIVTPVIEDLGFELVRLRLMSGKTATLQIMAERPEGGIEVDECADISTAVSAVLDVED 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT--SETG 142
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G   SE  
Sbjct: 74  PIIDAYALEVSSPGIDRPLTRLKDFDTYEGYEAKIETQEMIDGRKRWRGVLAGIEGSEVL 133

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           F +E E  GE    E  I + FD L  A+LI+TD+L+R  L 
Sbjct: 134 FNIEGEG-GE----EQTIGLQFDWLSDAKLILTDDLIRDMLR 170


>gi|304320432|ref|YP_003854075.1| hypothetical protein PB2503_04292 [Parvularcula bermudensis
           HTCC2503]
 gi|303299334|gb|ADM08933.1| hypothetical protein PB2503_04292 [Parvularcula bermudensis
           HTCC2503]
          Length = 174

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 6/161 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ P+IE   +  +++ L   K   LQI  ER DG MT  DC  LS+A+S +L+  +
Sbjct: 8   LTDLLLPIIETEGYELIRLRLTGAKQQTLQIMAERPDGTMTAEDCARLSRAVSAVLEEAD 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I G Y LEVSSPGIDRP+ R  D+ RW G V   E+      +++  G + G       
Sbjct: 68  PISGEYVLEVSSPGIDRPLTRLKDYARWEGFVAKIELSQPVEGQKRYRGTLAGVENDDVC 127

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +      + D  E    I F  +   +L++TDEL+  SL  
Sbjct: 128 I------DLDGEEETALIPFSIIAGGKLVMTDELIAESLRR 162


>gi|56694992|ref|YP_165338.1| hypothetical protein SPO0064 [Ruegeria pomeroyi DSS-3]
 gi|81350793|sp|Q5LWL1|RIMP_SILPO RecName: Full=Ribosome maturation factor rimP
 gi|56676729|gb|AAV93395.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 208

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 89/159 (55%), Gaps = 4/159 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVI ++ +  V+I L+  K+  LQI  ++ DG + + DC  +S A+S  LDVE+
Sbjct: 15  LAEIVSPVIADLGYELVRIRLMSGKSTTLQIMADKPDGGIEVDDCAAISNAVSATLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G       
Sbjct: 75  PILDAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETTEMIDGRRRFRGELAGIEGNEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +  ++ GE     + I + FD L  A+L++TD+L++  L
Sbjct: 135 INLDQNGET----VTIGLEFDWLSDAKLVLTDDLIKEML 169


>gi|114800120|ref|YP_758845.1| hypothetical protein HNE_0111 [Hyphomonas neptunium ATCC 15444]
 gi|123129251|sp|Q0C5Z8|RIMP_HYPNA RecName: Full=Ribosome maturation factor rimP
 gi|114740294|gb|ABI78419.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 199

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 8/157 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMT-LRDCEELSQAISPILDVENI 85
           S++QPV E +    V++ +   +   LQI  ER  G  T + DC  LS+ +SP+L+  + 
Sbjct: 13  SLVQPVAEGLGMEIVRLRVQGGRRPHLQIMAERAGGAPTGIEDCARLSRGMSPVLEAADP 72

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I   Y LEVS+PGIDRP+ R  DF RW GH V  E+      +++  G I G    G  +
Sbjct: 73  ISEAYTLEVSTPGIDRPLTRPGDFARWIGHAVRIELARPIDGRRRFTGTITGEDNDGAHI 132

Query: 146 EKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           E +       +E ++  +   +  A L++TDEL+ A+
Sbjct: 133 ELD-------DETKLVAAVHEMSRASLVLTDELIEAA 162


>gi|254462851|ref|ZP_05076267.1| hypothetical protein RB2083_3442 [Rhodobacterales bacterium
           HTCC2083]
 gi|206679440|gb|EDZ43927.1| hypothetical protein RB2083_3442 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 193

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 8/155 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ F  V++ L+  K   LQI  ER  G + +  C E+S AI   LDVE+
Sbjct: 15  LAGIITPVIEDLGFELVRVRLMSGKTTTLQIMAERPTGGIEVDQCAEISTAIGATLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G       
Sbjct: 75  PIIDEYTLEVSSPGIDRPLTRLKDFATFEGYEAKIETTELIDGRRRFKGQLAGVEGNDVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           +        ++ E  + ++FD L  A+L++TDEL+
Sbjct: 135 I--------NIEEGTVGLNFDWLSDAKLVLTDELI 161


>gi|260431716|ref|ZP_05785687.1| hypothetical protein SL1157_0822 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415544|gb|EEX08803.1| hypothetical protein SL1157_0822 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 196

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 4/168 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ +  V+I L+  K   LQI  ++ DG + + DC E+S A+S  LDVE+
Sbjct: 15  LAEIITPVIEDLGYELVRIRLMSGKQTTLQIMADKPDGGIEVDDCAEISNAVSATLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G       
Sbjct: 75  PILDAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKLETTELIDGRRRFKGELAGVEGDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +      E     + I + FD L  A+L++TD+L++  L        L
Sbjct: 135 INIPNGDET----VTIGLQFDWLSDAKLVLTDDLIKEMLRQRKDAGAL 178


>gi|254510275|ref|ZP_05122342.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
 gi|221533986|gb|EEE36974.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
          Length = 232

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 4/168 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ +  V+I L+  K   +QI  ++ DG + + DC E+S A+S  LDVE+
Sbjct: 51  LAEIITPVIEDLGYELVRIRLMSGKTTTMQIMADKPDGGIEVDDCAEISNAVSATLDVED 110

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G       
Sbjct: 111 PILDAYTLEVSSPGIDRPLTRLKDFETFEGYEAKIETAELIDGRRRFKGELAGIEGDEVL 170

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +   +  E     + I + FD L  A+L++TD+L++  L        L
Sbjct: 171 INIPEGDET----ITIGLQFDWLSDAKLVLTDDLIKEMLRQRKDAGAL 214


>gi|84500728|ref|ZP_00998977.1| hypothetical protein OB2597_12236 [Oceanicola batsensis HTCC2597]
 gi|84391681|gb|EAQ04013.1| hypothetical protein OB2597_12236 [Oceanicola batsensis HTCC2597]
          Length = 189

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 88/160 (55%), Gaps = 8/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE+M F  V++ L+  +   LQI  ER  G + + +C E+S A+S  LDVE+
Sbjct: 13  LAEIVTPVIEDMGFELVRLRLMGGQTKTLQIMAERPGGGIEVDECAEISNAVSATLDVED 72

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G  E G  
Sbjct: 73  PVSDAYTLEVSSPGIDRPLTRLKDFDTFQGYEAKIETTELIDGRKRFKGVLAGV-EGGEI 131

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           L        ++ E  + + FD L  A+L++TDEL++  L 
Sbjct: 132 L-------INIEEGTVGLHFDWLADAKLVLTDELIKEMLK 164


>gi|83945004|ref|ZP_00957370.1| hypothetical protein OA2633_10254 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851786|gb|EAP89641.1| hypothetical protein OA2633_10254 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 178

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 6/167 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I  + +P+ E +    V++ ++  K   +QI  ER DG M + DC  LS+A+S + D  +
Sbjct: 11  ILEIAEPLAETLGLEIVRVRVMGGKKTTVQIMAERHDGTMVVEDCARLSRALSEVFDEAD 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            + G Y LEVSSPGIDRP+   S F RW G     E+     ++++  G + G  +    
Sbjct: 71  PVSGEYDLEVSSPGIDRPLTALSHFERWEGFEAKIELDRLVENRKRFRGMLAGIEDDNVL 130

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
           ++    GE D       I F+ +  A+L++TD L+ ASL   G   G
Sbjct: 131 MDLA--GEDD----TAVIPFEWIADAKLVMTDALVEASLKARGPIEG 171


>gi|296533458|ref|ZP_06896040.1| protein of hypothetical function DUF150 [Roseomonas cervicalis ATCC
           49957]
 gi|296266213|gb|EFH12256.1| protein of hypothetical function DUF150 [Roseomonas cervicalis ATCC
           49957]
          Length = 195

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 76/131 (58%), Gaps = 1/131 (0%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMT-LRDCEELSQAISP 78
           GL   I++ IQP +  M +  V++ +  ++   +Q+  +R DG +  + DCE +S A+  
Sbjct: 12  GLEARIAAAIQPTLTAMGYEIVRVQIHGKQTPTVQVMADRADGALIGVADCEAISHAVGA 71

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDV++   G + LEVSSPGIDRP+ R  D+LR+ GH+   E+ +    +++  G I+G 
Sbjct: 72  VLDVDDPFSGEWNLEVSSPGIDRPLTRTKDWLRFTGHLAIAEMSIPFEGRRRFRGTILGA 131

Query: 139 SETGFFLEKEK 149
            E    L  E+
Sbjct: 132 DEASVRLRLEE 142


>gi|167644003|ref|YP_001681666.1| hypothetical protein Caul_0030 [Caulobacter sp. K31]
 gi|259585739|sp|B0T164|RIMP_CAUSK RecName: Full=Ribosome maturation factor rimP
 gi|167346433|gb|ABZ69168.1| protein of unknown function DUF150 [Caulobacter sp. K31]
          Length = 199

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 18/179 (10%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLL---EEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           D+GL      ++ PV E + +  V++ L+   E++ L  QI  ER DG+M + DC +LS+
Sbjct: 8   DIGLV----ELLDPVAESVGYEIVRLRLMGGAEQRRL--QIMAERPDGDMNVEDCAKLSR 61

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS ILD  + I G Y LEVSSPG+DRP+ R  DF  + G  V  E+   +  +++  G+
Sbjct: 62  AISEILDAADPISGEYTLEVSSPGVDRPLTRLKDFETYAGLEVRIELDRVAEGRKRFKGE 121

Query: 135 IMGT--SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
           + G    + G  LE E       ++  +   F+ ++ A+L++TD+L++       +  G
Sbjct: 122 LAGVEDGQVGLNLEGE-------DDTTVYFPFEWIVDAKLVLTDQLMKRGAEQRAARVG 173


>gi|83942069|ref|ZP_00954531.1| hypothetical protein EE36_07533 [Sulfitobacter sp. EE-36]
 gi|83953119|ref|ZP_00961841.1| hypothetical protein NAS141_12461 [Sulfitobacter sp. NAS-14.1]
 gi|83842087|gb|EAP81255.1| hypothetical protein NAS141_12461 [Sulfitobacter sp. NAS-14.1]
 gi|83847889|gb|EAP85764.1| hypothetical protein EE36_07533 [Sulfitobacter sp. EE-36]
          Length = 192

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 8/168 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE+M F  V++ L+  K+  LQ+  +R DG + + +   +SQ+IS ++DVE+
Sbjct: 15  MAEIITPVIEDMGFELVRVRLMSGKSTTLQVMADRPDGGIEVDELALISQSISAVMDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G++ G  +    
Sbjct: 75  PILDEYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETGELIDGRRRFKGELAGVEDDEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           +  E        E  I + FD L  A+L++TD+L++  L    +   +
Sbjct: 135 INVE--------EGTIGLKFDWLTDAKLVLTDDLIKEMLRQRKASGAI 174


>gi|85705697|ref|ZP_01036794.1| hypothetical protein ROS217_10367 [Roseovarius sp. 217]
 gi|85669687|gb|EAQ24551.1| hypothetical protein ROS217_10367 [Roseovarius sp. 217]
          Length = 191

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 8/161 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ +  V++ L+  +   LQI  ++ DG + + DC  +S A+S +LDVE+
Sbjct: 15  MAEIITPVIEDLGYELVRVRLMGGQYHTLQIMADKPDGGIEVDDCAVISTAVSAVLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G   T   
Sbjct: 75  PLVEAYTLEVSSPGIDRPLTRLKDFEAFEGYEAKIETTELIDGRRRFKGVLAGVEGTEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +        ++ E  I + FD L  A+L++TDEL++  L  
Sbjct: 135 I--------NVEEGTIGLEFDWLSDAKLVLTDELIKEMLRQ 167


>gi|114571579|ref|YP_758259.1| hypothetical protein Mmar10_3040 [Maricaulis maris MCS10]
 gi|122314890|sp|Q0AK72|RIMP_MARMM RecName: Full=Ribosome maturation factor rimP
 gi|114342041|gb|ABI67321.1| protein of unknown function DUF150 [Maricaulis maris MCS10]
          Length = 178

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 7/168 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVE 83
           I ++ +PV  E++   V++ ++  K   LQI  +R +G  + + DC   S+A+S + +VE
Sbjct: 11  ILALAEPVAAELALEVVRVRIMSGKRPRLQIMADRTNGTGIEVEDCARFSRALSEVFEVE 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + + G Y LEVSSPGIDRP+     F RW G+ V  E+   +  +++  G + G  +   
Sbjct: 71  DPVAGEYDLEVSSPGIDRPLTTLPHFERWEGNEVKIELDRLAEGRKRFRGILAGVEDGHV 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            L+ +  GE D       I FD ++ A+L++TD L+ A L   G  A 
Sbjct: 131 GLDMD--GEDDTT----MIPFDWIVEAKLVLTDALIEADLKARGRGAA 172


>gi|58040012|ref|YP_191976.1| hypothetical protein GOX1579 [Gluconobacter oxydans 621H]
 gi|81351770|sp|Q5FQM6|RIMP_GLUOX RecName: Full=Ribosome maturation factor rimP
 gi|58002426|gb|AAW61320.1| Hypothetical protein associated with nus operon [Gluconobacter
           oxydans 621H]
          Length = 203

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 8/164 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM-TLRDCEELSQAISP 78
           GL   I+  I P + ++ +  V++S+L      +QI  +R +G++ ++ DCE++S A   
Sbjct: 17  GLEARIAERIAPTLADLGYELVRLSVLGRDTPTIQIMADRANGSLISVEDCEQISHAAGA 76

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILDV++ I G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G +MG 
Sbjct: 77  ILDVDDPIPGAWMLEVSSAGIDRPLTRAKDWERFAGHLAKAELDVPLNGRRRFSGTVMGA 136

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
            +    +  +       +  +  +    +  ARL++TD L+ AS
Sbjct: 137 RDGNAIIRLD-------DGTEAVLPLVDIRKARLVLTDALIEAS 173


>gi|148284845|ref|YP_001248935.1| hypothetical protein OTBS_1566 [Orientia tsutsugamushi str.
           Boryong]
 gi|254800562|sp|A5CEN4|RIMP_ORITB RecName: Full=Ribosome maturation factor rimP
 gi|146740284|emb|CAM80659.1| conserved hypothetical protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 160

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 93/167 (55%), Gaps = 9/167 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           L   I  +I P  + + ++ + +S +  K  +L+I ++R D+  + + DC+  S+AIS +
Sbjct: 2   LNDKIKELITPTAKTLGYKVINVSFIV-KPAILKIVIDRFDEKKVNVLDCQVFSKAISAV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVENII G Y LEV S GI+R ++   DF+++ G+ +  ++V +  + +K IG I    
Sbjct: 61  LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
                L  +       N+  IAI +D++  A+++ TDE+ R    NY
Sbjct: 121 GQEITLNLQ-------NDSTIAIDYDNIKVAKIVFTDEMFRQITKNY 160


>gi|83950735|ref|ZP_00959468.1| hypothetical protein ISM_06535 [Roseovarius nubinhibens ISM]
 gi|83838634|gb|EAP77930.1| hypothetical protein ISM_06535 [Roseovarius nubinhibens ISM]
          Length = 190

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 8/161 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PVIE++ F  V++ L+  K   LQI  ER +G + + +C  +S  +S +LDVE+
Sbjct: 15  LAEIVTPVIEDLGFELVRLRLMGGKTDTLQIMAERPEGGIEVDECARISTEVSAVLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G       
Sbjct: 75  PIIEAYTLEVSSPGIDRPLTRLKDFETFEGYEAKIETSELIDGRKRFKGVLAGVEGEEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +        ++ E  I + FD L  A+L++TDEL++  L  
Sbjct: 135 I--------NVEEGTIGLQFDWLADAKLVLTDELIKEMLRQ 167


>gi|148259242|ref|YP_001233369.1| hypothetical protein Acry_0222 [Acidiphilium cryptum JF-5]
 gi|259585658|sp|A5FV18|RIMP_ACICJ RecName: Full=Ribosome maturation factor rimP
 gi|146400923|gb|ABQ29450.1| protein of unknown function DUF150 [Acidiphilium cryptum JF-5]
          Length = 201

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 98/165 (59%), Gaps = 9/165 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISP 78
           GL G I+ +I P +E + +  V+++++ ++   +QI  +R D   ++L DCE +S  +S 
Sbjct: 37  GLEGRIAELIAPGLESIGYELVRVAIMGKQTPTVQIMADRADQTPLSLDDCERISHLVSA 96

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI-VLSSGDKQKLIGKIMG 137
           +LDV++ I   + LEVSS GIDRP+ R  D+ R+ GH+   ++ V ++  +++L G ++G
Sbjct: 97  VLDVDDPISSAWTLEVSSAGIDRPLTRVKDWNRYAGHLARIDLDVPTASGRKRLTGTVLG 156

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
             E       + R + D  E  + +    +  A+L++T+EL++A+
Sbjct: 157 ADEA------QARVKLDSGE-TVDLPHAHIRRAKLVLTEELIKAT 194


>gi|326402395|ref|YP_004282476.1| hypothetical protein ACMV_02470 [Acidiphilium multivorum AIU301]
 gi|325049256|dbj|BAJ79594.1| hypothetical protein ACMV_02470 [Acidiphilium multivorum AIU301]
          Length = 174

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 98/165 (59%), Gaps = 9/165 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISP 78
           GL G I+ +I P +E + +  V+++++ ++   +QI  +R D   ++L DCE +S  +S 
Sbjct: 10  GLEGRIAELIAPGLESIGYELVRVAIMGKQTPTVQIMADRADQTPLSLDDCERISHLVSA 69

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI-VLSSGDKQKLIGKIMG 137
           +LDV++ I   + LEVSS GIDRP+ R  D+ R+ GH+   ++ V ++  +++L G ++G
Sbjct: 70  VLDVDDPISSAWTLEVSSAGIDRPLTRVKDWNRYAGHLARIDLDVPTASGRKRLTGTVLG 129

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
             E       + R + D  E  + +    +  A+L++T+EL++A+
Sbjct: 130 ADEA------QARVKLDSGE-TVDLPHAHIRRAKLVLTEELIKAT 167


>gi|149202948|ref|ZP_01879919.1| hypothetical protein RTM1035_19436 [Roseovarius sp. TM1035]
 gi|149143494|gb|EDM31530.1| hypothetical protein RTM1035_19436 [Roseovarius sp. TM1035]
          Length = 191

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 8/161 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I PVIE++ +  V++ L+  +   LQI  ++ +G + + DC  +S A+S +LDVE+
Sbjct: 15  LAEIITPVIEDLGYELVRVRLMGGQYHTLQIMADKPEGGIEVDDCAAISTAVSAVLDVED 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G + G   +   
Sbjct: 75  PLVEAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETTELIDGRRRFKGVLAGVEGSEVL 134

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           +        ++ E  I + FD L  A+L++TDEL++  L  
Sbjct: 135 I--------NVEEGTIGLEFDWLSDAKLVLTDELIKEMLRQ 167


>gi|189183524|ref|YP_001937309.1| hypothetical protein OTT_0617 [Orientia tsutsugamushi str. Ikeda]
 gi|254806539|sp|B3CR92|RIMP_ORITI RecName: Full=Ribosome maturation factor rimP
 gi|189180295|dbj|BAG40075.1| hypothetical protein OTT_0617 [Orientia tsutsugamushi str. Ikeda]
          Length = 160

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 93/167 (55%), Gaps = 9/167 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           L   I  +I P  + + ++ + ++ +  K  +L+I ++R D+  + + DC+  S+AIS +
Sbjct: 2   LNDKIKELITPTAKALGYKVINVNFVV-KPAILKIVIDRFDEKKVKVLDCQAFSKAISAV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVENII G Y LEV S GI+R ++   DF+++ G+ +  ++V +  + +K IG I    
Sbjct: 61  LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
                L  +       N+  IAI +D++  A+++ TDE+ R    NY
Sbjct: 121 GQEITLNLQ-------NDSTIAIDYDNIKVAKIVFTDEMFRQITKNY 160


>gi|254295402|ref|YP_003061425.1| hypothetical protein Hbal_3060 [Hirschia baltica ATCC 49814]
 gi|254043933|gb|ACT60728.1| protein of unknown function DUF150 [Hirschia baltica ATCC 49814]
          Length = 203

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I  +I+P    +    V++ ++     +LQI  E+ DG M + DC +LS+AI P+LDVE+
Sbjct: 11  ILDIIEPEATSIGLEIVRVRMMGANTPILQIMAEKPDGTMDVEDCAKLSRAIGPVLDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPGIDRP+ R+ DF  W  + V  E+ +    +++  G I  T E    
Sbjct: 71  PIHSEYNLEVSSPGIDRPLTREGDFANWKTYEVRIELGIPIDGRRRFHGTI--TDEVNGI 128

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           +  +    KD ++ +I+I    ++ A L++ D L+
Sbjct: 129 VSLDL---KDGSKAEISIV--DMVKASLVMNDRLI 158


>gi|294011602|ref|YP_003545062.1| hypothetical protein SJA_C1-16160 [Sphingobium japonicum UT26S]
 gi|292674932|dbj|BAI96450.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 196

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 9/163 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDG-NMTLRDCEELSQAISPIL 80
            +++++I+P ++ + F  V+I L    +   LQI  ER +   + + DC  +S+ +S +L
Sbjct: 27  AELTALIEPEVKALGFDLVRIKLFGSGDEYTLQIMAERPETKQLVIEDCAAISRRLSDVL 86

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  + IE  YRLEVSSPGIDRP+ R +DFL W GH        +   ++   G + G   
Sbjct: 87  DEADPIEEAYRLEVSSPGIDRPLTRLTDFLEWAGHEAKIAATETVSGRKSFRGVLKGVEG 146

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
                   K G+       +AI F  +  A+LI+TD L+ AS+
Sbjct: 147 EDILFADAKAGD-------VAIPFALVGDAKLILTDALIAASM 182


>gi|307293341|ref|ZP_07573187.1| protein of unknown function DUF150 [Sphingobium chlorophenolicum
           L-1]
 gi|306881407|gb|EFN12623.1| protein of unknown function DUF150 [Sphingobium chlorophenolicum
           L-1]
          Length = 174

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 9/167 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDG-NMTLRDCEELSQAI 76
           M    +++++I+P ++ + F  V+I L    +   LQI  ER +   + + DC  +S+ +
Sbjct: 1   MADIAELTALIEPEVKALGFDLVRIKLFGSGDEYTLQIMAERPETKQLVIEDCATISRRL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +LD  + IE  YRLEVSSPGIDRP+ R +DFL W GH        +   ++   G + 
Sbjct: 61  SDVLDEADPIEEAYRLEVSSPGIDRPLTRLTDFLEWTGHEAKIAATETVSGRKSFRGVLN 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           G           K G+       +AI F  +  A+LI+TD L+ AS+
Sbjct: 121 GIEGEDILFTDAKAGD-------VAIPFALVGDAKLILTDALIAASM 160


>gi|209966174|ref|YP_002299089.1| hypothetical protein RC1_2909 [Rhodospirillum centenum SW]
 gi|259586184|sp|B6IVF3|RIMP_RHOCS RecName: Full=Ribosome maturation factor rimP
 gi|209959640|gb|ACJ00277.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 252

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 1/114 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVE 83
           I  +I+P +E M +  V++ L   +   LQI  ER DG  MT+ DC ++S+A+S +LDVE
Sbjct: 7   IGRIIEPSVEAMGYELVRVQLSGGQRPTLQIMAERSDGAAMTVEDCADISRAVSALLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + + G Y LEVSSPGIDRP+ R  DF R+ G     E       +++  G + G
Sbjct: 67  DPLPGAYTLEVSSPGIDRPLTRLKDFERFAGFEARLETKAPVDGRKRFRGFLAG 120


>gi|258545584|ref|ZP_05705818.1| BCR/YhbC family protein [Cardiobacterium hominis ATCC 15826]
 gi|258519284|gb|EEV88143.1| BCR/YhbC family protein [Cardiobacterium hominis ATCC 15826]
          Length = 157

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 1/119 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++PV+E M F  V +       N +L+I+V+R +G + +    E+++A++PILDVE
Sbjct: 7   VTELLKPVVESMGFEWVGVEYHHNSVNAILRIYVDRPEGGIDMEGVVEVTEAVNPILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + I   Y LEVSSPG+DRP+   +DF+R+ G      +    G +++  G I  T ET 
Sbjct: 67  DPINAPYTLEVSSPGLDRPLFSFADFVRFTGETAKVHLHAPVGKRRRFEGVIESTDETA 125


>gi|319790653|ref|YP_004152286.1| protein of unknown function DUF150 [Thermovibrio ammonificans HB-1]
 gi|317115155|gb|ADU97645.1| protein of unknown function DUF150 [Thermovibrio ammonificans HB-1]
          Length = 162

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 7/149 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++EE  F  V +   +E    +L+I+ +R  G +T+ DC+ +S+ I  +LDVE
Sbjct: 12  VKELLAPILEEGGFELVDVEFQKEPVGWVLRIYADRPQGGITISDCQWISERIGTLLDVE 71

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++I   Y LEVSSPG+DRP+  + DF R  G VV  +      +++   G ++ TSE G 
Sbjct: 72  DVIPHAYHLEVSSPGLDRPLKTQRDFERHRGVVVKIKTHEPMDNQRNFKGAVVSTSERGV 131

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +    R         + I +D++ SAR+
Sbjct: 132 TVHDVSRN------ADVEIPYDNIKSARV 154


>gi|95929629|ref|ZP_01312371.1| protein of unknown function DUF150 [Desulfuromonas acetoxidans DSM
           684]
 gi|95134326|gb|EAT15983.1| protein of unknown function DUF150 [Desulfuromonas acetoxidans DSM
           684]
          Length = 187

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 18/167 (10%)

Query: 1   MESTHFLHS-KYEPRIFGDMGLAGDISS---------VIQPVIEEMSFRSVQISLLEE-K 49
           M S  F H   + P +F + G   D+S          + +P++EE     V I    +  
Sbjct: 1   MRSELFAHFFLFYPFLFKEQGRCNDMSDEAVLNKVIELAEPILEEQGLELVDIEFFSQGS 60

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
             LL++F+++  G + L DC + S+ +S ILDVE +IE  YRLEVSSPGIDRP+ +++DF
Sbjct: 61  EWLLRLFIDKP-GGVNLDDCADCSRELSLILDVEEVIEVAYRLEVSSPGIDRPLKKEADF 119

Query: 110 LRWNGHVVACEIV------LSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            R+ G +V  + +      L    ++  IG+++G  +   F+E+  +
Sbjct: 120 ERFKGEMVRAKTLQAIDPDLRGYQRKTFIGELLGLEDDVVFIEQNDK 166


>gi|160871632|ref|ZP_02061764.1| 15 kDa protein [Rickettsiella grylli]
 gi|159120431|gb|EDP45769.1| 15 kDa protein [Rickettsiella grylli]
          Length = 153

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 10/150 (6%)

Query: 25  ISSVIQPVIEEMSFR-SVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I + + P IE + +     + L E +   L+I+++ + G +TL DCE +S+ +  +LDVE
Sbjct: 8   IEARLSPTIEALGYELWACVYLREGQKNRLRIYIDSEKG-ITLSDCERVSRQVGALLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++++GHY LEVSSPG+DRP++++  F R+ G+ +   +     +++K  G +  T  +G 
Sbjct: 67  DLLQGHYHLEVSSPGLDRPLIKEDHFQRYVGYPIHVFLQSPIDNQRKFKGLLQSTRASGI 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            L +E +        +  +++D++L A ++
Sbjct: 127 VLNREGK--------EFVLTWDNILHANVL 148


>gi|56551453|ref|YP_162292.1| hypothetical protein ZMO0557 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761100|ref|ZP_04759189.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752934|ref|YP_003225827.1| hypothetical protein Za10_0696 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|81355359|sp|Q5NQ24|RIMP_ZYMMO RecName: Full=Ribosome maturation factor rimP
 gi|56543027|gb|AAV89181.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374719|gb|EER64180.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552297|gb|ACV75243.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 184

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 95/169 (56%), Gaps = 12/169 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDG-NMTLRDCEELSQAISPILDV 82
           I+++++P ++ +    V+I++   K +  LQI  ER D   + L +CE LS+ +S I D 
Sbjct: 16  ITALVEPEVKALGLELVRIAMFGGKSDPTLQIMAERPDTRQIGLTECEALSRRLSEIFDE 75

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET- 141
           ++ IE  YRLEVSSPGIDRP+ R+ D+  W G      +      +++  G+I+G  +  
Sbjct: 76  QDPIEDAYRLEVSSPGIDRPLTRRKDYQDWKGFSARIRLSAPLDGRKQFDGEIIGIDDAD 135

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNYGS 188
              L+  K G+K        + F ++  ++L++TD L+ A+  L++ G+
Sbjct: 136 NVILDCPKVGQK-------ILPFSAIERSKLLLTDALIAATQPLDSEGA 177


>gi|254447077|ref|ZP_05060544.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
 gi|198263216|gb|EDY87494.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
          Length = 159

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 78/120 (65%), Gaps = 3/120 (2%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           S+I+PV++++ +  V +      +  +L ++++RD+G + + DC ++S+ +S +LDVE+ 
Sbjct: 10  SLIEPVVQDLGYELVGVDFRANASPAVLCVYIDRDEG-VNIDDCAKISREVSAVLDVEDP 68

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I   Y LEVSSPG+DRP+ R+SDF+++ GH+   ++ +   +++   G++ G  E G  L
Sbjct: 69  ITSAYNLEVSSPGLDRPLFRESDFVKYKGHLAKVKLSIPYEERRNFKGQLNGV-EDGMVL 127


>gi|258591346|emb|CBE67645.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 153

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 76/125 (60%), Gaps = 2/125 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++  P+  E+    V +    E    +L++++++ DG +TL DC+ +S+ +S +LDVE
Sbjct: 9   VRAIALPLFTELGLELVDVEFRREAGGWILRLYLDKPDG-VTLDDCQRVSEELSDLLDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NII   Y LEVSSPG++RP++R+SDFLR+ G       + +   +++ +G + G  +   
Sbjct: 68  NIIHHPYTLEVSSPGLNRPLLRESDFLRFAGQRARVTTLQAVAGQRRFLGVLRGCEDGQV 127

Query: 144 FLEKE 148
            LE+E
Sbjct: 128 LLERE 132


>gi|326388031|ref|ZP_08209635.1| hypothetical protein Y88_0399 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207532|gb|EGD58345.1| hypothetical protein Y88_0399 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 197

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 17/169 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-----LLQIFVERDD-GNMTLRDCEELSQAISP 78
           I  V++P  + + F  V+++L  +  +      LQ+  ER + G + + DC ELS+ IS 
Sbjct: 18  IIEVVEPEAKALGFDLVRVALFGKTEVGDEEHTLQVMAERPETGQLLIEDCAELSRRISD 77

Query: 79  ILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            +D      E++IE  YRLEVSSPGIDRP+ R  DF  W GH    E+      +++  G
Sbjct: 78  RMDQLEEAGEDLIEDAYRLEVSSPGIDRPLTRPKDFAGWVGHEARIELKDLIDRRKRYRG 137

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +++G       +  E+      + +  A+ FD +  A+L++TD+L+ AS
Sbjct: 138 ELVGFDPATNTISIEE------DAVVYAVPFDLVAHAKLVLTDKLIAAS 180


>gi|85710532|ref|ZP_01041596.1| hypothetical protein NAP1_08982 [Erythrobacter sp. NAP1]
 gi|85687710|gb|EAQ27715.1| hypothetical protein NAP1_08982 [Erythrobacter sp. NAP1]
          Length = 188

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 21/170 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE----EKNLLLQIFVERD-DGNMTLRDCEELSQAISPI 79
           ++ +I+P  E + F  V++ ++     +    LQI  E    G + +  C ELS+ +S +
Sbjct: 7   LTDLIEPEAEALGFELVRVKMMPSEAGDGGEALQIMAEDPATGQLVIEQCAELSRRVSDM 66

Query: 80  LDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIG 133
           +D      E +IEG Y LEVSSPGIDRP+ R+ DF  W GH     IV++ G D Q++  
Sbjct: 67  IDAREEAGEVLIEGAYHLEVSSPGIDRPLTREKDFANWAGH--EARIVMTKGFDGQRVYK 124

Query: 134 KIMGTSETGFF-LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
             +G  E G   +   K GE  + +       D + SA+L +TD+L+ A+
Sbjct: 125 GELGGVENGMVTITDAKAGEAKLPQ-------DQIHSAKLELTDKLIAAT 167


>gi|148556721|ref|YP_001264303.1| hypothetical protein Swit_3820 [Sphingomonas wittichii RW1]
 gi|259586199|sp|A5VCZ9|RIMP_SPHWW RecName: Full=Ribosome maturation factor rimP
 gi|148501911|gb|ABQ70165.1| protein of unknown function DUF150 [Sphingomonas wittichii RW1]
          Length = 186

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDG-NMTLRDCEELSQAISPILDV 82
           ++ +I+P  + +    V+++    K +  LQ+  ER D   + + DCE LS+ IS   D 
Sbjct: 7   LTKLIEPEAKALGLDLVRVAFFGGKSDPTLQVMAERPDTRQLDIADCEALSRRISDKFDE 66

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + IE  YRLEVSSPGIDRP+ R  D+  W+G     ++      +++  G+I+ +    
Sbjct: 67  LDPIEDAYRLEVSSPGIDRPLTRVKDWADWSGFDARVKLAAPLDGRKQFDGRIVASDGDS 126

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
             L   K GE  +   QIA       SA+LI+TD L++A+
Sbjct: 127 VTLGVNKLGEVTVPLAQIA-------SAKLILTDALIKAT 159


>gi|197106903|ref|YP_002132280.1| hypothetical protein PHZ_c3442 [Phenylobacterium zucineum HLK1]
 gi|259586178|sp|B4RC58|RIMP_PHEZH RecName: Full=Ribosome maturation factor rimP
 gi|196480323|gb|ACG79851.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 187

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 14/158 (8%)

Query: 31  PVIEEMSFRSVQISLL--EEKNLLLQIFVER------DDGNMTLRDCEELSQAISPILDV 82
           PV E + +  V++ L+  E     LQI  ER        G+M + DC +LS+A+S +LD 
Sbjct: 17  PVAEAVGYEIVRLRLMGGERNQRRLQIMAERPLLEDGTGGDMNVEDCAKLSRAVSEVLDA 76

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I G Y LEVSSPG+DRP+ R  DF  + G+    E+   +  +++  G + G     
Sbjct: 77  ADPISGEYTLEVSSPGVDRPLTRLKDFDTYEGYEARLELDRLAEGRKRFRGVLAGVEGDQ 136

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             ++ E   E  +      + F  ++ A+L++TDEL++
Sbjct: 137 VAIDLEGEEETAL------VPFAWIVEAKLVLTDELMK 168


>gi|85373512|ref|YP_457574.1| hypothetical protein ELI_03425 [Erythrobacter litoralis HTCC2594]
 gi|122544926|sp|Q2NC14|RIMP_ERYLH RecName: Full=Ribosome maturation factor rimP
 gi|84786595|gb|ABC62777.1| hypothetical protein ELI_03425 [Erythrobacter litoralis HTCC2594]
          Length = 188

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 17/168 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK----NLLLQIFVERD-DGNMTLRDCEELSQAISPI 79
           ++++I+P  + + F  V++ ++  +       LQI  E    G + +  C ELS+ +S +
Sbjct: 7   LTALIEPEAKALGFELVRVKMMPSEAGDGGQALQIMAEDPATGQLLIEQCAELSRKVSDV 66

Query: 80  LDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +D      E +IEG Y LEVSSPGIDRP+ R  DF  W GH     +V      + + G 
Sbjct: 67  IDAAEESGEVLIEGAYHLEVSSPGIDRPLTRPKDFADWAGHEAKVSLVEKIDGHRNMRGI 126

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           ++G       +   + GE       ++ + + + SA+L++TD+L+ A+
Sbjct: 127 LLGIDGETVTIADNRAGE-------VSFALEQIHSAKLVLTDKLIAAT 167


>gi|222055778|ref|YP_002538140.1| protein of unknown function DUF150 [Geobacter sp. FRC-32]
 gi|254801441|sp|B9M1F7|RIMP_GEOSF RecName: Full=Ribosome maturation factor rimP
 gi|221565067|gb|ACM21039.1| protein of unknown function DUF150 [Geobacter sp. FRC-32]
          Length = 159

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 79/122 (64%), Gaps = 7/122 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ + + V+  +    V++    E + L+L++F++++ G +TL DCE +S+ +S IL+VE
Sbjct: 10  VTELAEQVLSSLGMELVELEYKHEGRELVLRLFIDKE-GGVTLDDCESVSRDLSQILEVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE----IVLSSGDKQK-LIGKIMGT 138
           +II GHYR EVSSPG+DRP+ + SD+ ++ G +V       +   +G+K+K  +G++ G 
Sbjct: 69  DIITGHYRFEVSSPGLDRPLKKGSDYEKYAGRLVKIRTFEALADDAGNKRKTFLGELKGL 128

Query: 139 SE 140
            E
Sbjct: 129 KE 130


>gi|255019835|ref|ZP_05291911.1| transcription termination protein NusA-like protein
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970764|gb|EET28250.1| transcription termination protein NusA-like protein
           [Acidithiobacillus caldus ATCC 51756]
          Length = 176

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 54/72 (75%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           +++ LQ+F+E+D+G +T+ DC  +S+ +S  LDVEN I G YRLEVSSPG+DRP+ R++D
Sbjct: 57  RSVTLQVFIEKDEGAVTIEDCAAVSRQLSVWLDVENPIAGAYRLEVSSPGLDRPLKREAD 116

Query: 109 FLRWNGHVVACE 120
           F R+ G +   E
Sbjct: 117 FQRFVGALAEIE 128


>gi|325294241|ref|YP_004280755.1| ribosome maturation factor rimP [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064689|gb|ADY72696.1| Ribosome maturation factor rimP [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 162

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 84/149 (56%), Gaps = 7/149 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++EE  F  V I  + E    +L+I+ +R +G +T+ DC+ +S+ I  +LD+E
Sbjct: 12  VKELLFPILEEGGFELVDIEFVREPIGWVLRIYADRPEGGITISDCQWISERIGTLLDIE 71

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++I   Y LEVSSPG++RP+  + DF R  G VV  +      +++   G+++  SE+  
Sbjct: 72  DLIPHAYNLEVSSPGLNRPLKNQRDFERNLGTVVKIKTHEPMDNQRNFKGEVISASESAV 131

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +    R        ++ I F+++ SAR+
Sbjct: 132 VIHDVSRN------AEVEIPFENIKSARI 154


>gi|164688522|ref|ZP_02212550.1| hypothetical protein CLOBAR_02167 [Clostridium bartlettii DSM
           16795]
 gi|164602935|gb|EDQ96400.1| hypothetical protein CLOBAR_02167 [Clostridium bartlettii DSM
           16795]
          Length = 153

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 77/117 (65%), Gaps = 2/117 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  ++QP+++  +   V I  ++E     L+I++E++ G +TL DC E+S+ ++PILD +
Sbjct: 9   IEELVQPIVDARNIEIVDIEYVKEAGQFYLRIYLEKE-GGITLDDCAEVSRELNPILDEK 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           + I+ +Y LEV SPG+DRP+ ++ DF+R+ G+ V  ++       ++L G+++G +E
Sbjct: 68  DPIKDNYFLEVCSPGLDRPLKKEKDFIRYAGYDVEIKLYKPLNGTKQLEGELIGLTE 124


>gi|225181380|ref|ZP_03734824.1| protein of unknown function DUF150 [Dethiobacter alkaliphilus AHT
           1]
 gi|225167961|gb|EEG76768.1| protein of unknown function DUF150 [Dethiobacter alkaliphilus AHT
           1]
          Length = 151

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 82/142 (57%), Gaps = 2/142 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  ++++  P+ E++ F  V +  ++E   ++L++F++R+ G +TL  C+E+S A+S  
Sbjct: 4   IAERVTAIADPLAEKLGFELVDVEYVKEGSQMILRVFIDRE-GGITLDHCQEMSHALSDE 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + IE  Y LEVSSPGI+RP+ +  DF+R+ G  V+ ++      K+K  G + G  
Sbjct: 63  LDRVDPIEQSYHLEVSSPGIERPLKKDEDFVRFAGKPVSIKLFAPLEGKKKYGGILRGLE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIA 161
           E    LE E      +   Q+A
Sbjct: 123 EGEILLEVENNNLVRIPRTQVA 144


>gi|258516335|ref|YP_003192557.1| hypothetical protein Dtox_3192 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780040|gb|ACV63934.1| protein of unknown function DUF150 [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 153

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           LA  +  ++ PV+EEM+   V +  ++E     L+IF+++  G + + DC+ +SQ +S +
Sbjct: 6   LADIVEGLVAPVVEEMAMELVDVEYVKEGSQWYLRIFIDKT-GGIFVDDCQAVSQKVSRL 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D ++ I   Y LEVSSPG+DRP+ + +D+ R+ G+ V          K+   G++ G S
Sbjct: 65  MDEKDPIPHAYILEVSSPGLDRPLKKAADYERFCGYEVVVTTYAPFNGKKSFSGRLDGLS 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E G  +        +++  +  I  D + SARL V
Sbjct: 125 EQGVII--------NVDGTEYVIPVDQVASARLAV 151


>gi|134299808|ref|YP_001113304.1| hypothetical protein Dred_1961 [Desulfotomaculum reducens MI-1]
 gi|259585752|sp|A4J5X6|RIMP_DESRM RecName: Full=Ribosome maturation factor rimP
 gi|134052508|gb|ABO50479.1| protein of unknown function DUF150 [Desulfotomaculum reducens MI-1]
          Length = 153

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++  + P++EE     V +  ++E  N  L+IF+++  G + L DC+ +S+ I  +LD  
Sbjct: 10  VTEAVAPIVEEAKLELVDVEYVKEGGNWYLRIFIDKP-GGIELDDCQGVSEKIDTLLDEI 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + +   Y LEVSSPGI+RP+ +  DF ++NGH+V           +  IGK++  +E G 
Sbjct: 69  DPVPQAYFLEVSSPGIERPLKKPQDFEKFNGHLVNITTFAPINGSKNFIGKLLDYNEEGI 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE + +        Q+ +    + +ARL V
Sbjct: 129 HLEIKGK--------QVVLPHQQVATARLAV 151


>gi|270158100|ref|ZP_06186757.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|289163635|ref|YP_003453773.1| hypothetical protein LLO_0291 [Legionella longbeachae NSW150]
 gi|269990125|gb|EEZ96379.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|288856808|emb|CBJ10619.1| putative conserved hypothetical protein [Legionella longbeachae
           NSW150]
          Length = 147

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 73/123 (59%), Gaps = 2/123 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++  ++ P I +M +       L + ++ LL+I++++ DG +T+ DCE +S  +S +LDV
Sbjct: 5   ELEHLLAPSIADMGYELWGCEYLSQGRHSLLRIYIDKSDG-ITIDDCEAVSHQVSALLDV 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G+Y LEVSSPGI RP+ +   + R+ G  V  +       K+KL+G ++  SET 
Sbjct: 64  EDPIHGNYSLEVSSPGIPRPLFKSWQYQRYLGQEVQVKTFKPVCGKRKLLGTLVSASETS 123

Query: 143 FFL 145
             L
Sbjct: 124 IVL 126


>gi|167630354|ref|YP_001680853.1| conserved hypothetical protein, possible yhbc family
           [Heliobacterium modesticaldum Ice1]
 gi|259585782|sp|B0THQ9|RIMP_HELMI RecName: Full=Ribosome maturation factor rimP
 gi|167593094|gb|ABZ84842.1| conserved hypothetical protein, possible yhbc family
           [Heliobacterium modesticaldum Ice1]
          Length = 154

 Score = 80.9 bits (198), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 10/157 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
           G + L   +S+   P++EE+    + +  ++E  N  L+IF++++ G + + DC+E+S+ 
Sbjct: 3   GKVRLEDRVSAWAMPIVEELGLELIDVEWVKEGGNWYLRIFIDKEAG-IEMEDCQEVSRR 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I  ILD E+ +   Y LEVSSPGIDRP+    D+ R+ G  V           ++ +G++
Sbjct: 62  IDEILDREDPVAHSYSLEVSSPGIDRPLKSDRDYERFRGETVRITTFAPVMGAKEHLGEL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G +ET   + K        N+ ++AI    + S RL
Sbjct: 122 AGKNETSILIRK--------NDEEMAIPLTQVSSVRL 150


>gi|307546729|ref|YP_003899208.1| hypothetical protein HELO_4139 [Halomonas elongata DSM 2581]
 gi|307218753|emb|CBV44023.1| K09748 hypothetical protein [Halomonas elongata DSM 2581]
          Length = 153

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++++I+PV+  M F    I  L + K+  L IF++ + G + + DC ++S+ +S +LDVE
Sbjct: 8   LNALIEPVVTAMGFELWGIDYLSQGKHSRLVIFIDHEQG-VGVDDCADVSRQVSAVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + I G YRLEVSSPG+DRP+     F R+ GH VA ++      ++K  G + G
Sbjct: 67  DPIAGEYRLEVSSPGMDRPLFTLEQFERYAGHTVAVKLRAPFDGRRKFQGLLAG 120


>gi|94497166|ref|ZP_01303738.1| hypothetical protein SKA58_13228 [Sphingomonas sp. SKA58]
 gi|94423271|gb|EAT08300.1| hypothetical protein SKA58_13228 [Sphingomonas sp. SKA58]
          Length = 196

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 15/164 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           ++++I+P ++ + F  V+I L     +  LQI  E      + + DC  +S+ +S +LD 
Sbjct: 29  LTALIEPEVQALGFDLVRIKLFGSGDDYTLQIMAENPRTKQLVIEDCATISRRLSDVLDE 88

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH---VVACEIVLSSGDKQKLIGKIMGTS 139
            + IE  YRLEVSSPGIDRP+ R  DF  W GH   + A EIV  SG ++   G + G  
Sbjct: 89  ADPIEEAYRLEVSSPGIDRPLTRLHDFQEWAGHEAKIGASEIV--SG-RKSFRGVVNGVD 145

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
                    K G+       + I F  +  A+L++TD L+ AS+
Sbjct: 146 GEEILFTDAKSGD-------VRIPFALVDEAKLLLTDALIAASM 182


>gi|103486102|ref|YP_615663.1| hypothetical protein Sala_0609 [Sphingopyxis alaskensis RB2256]
 gi|123380087|sp|Q1GVJ2|RIMP_SPHAL RecName: Full=Ribosome maturation factor rimP
 gi|98976179|gb|ABF52330.1| protein of unknown function DUF150 [Sphingopyxis alaskensis RB2256]
          Length = 181

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 14/166 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDV 82
           + ++I P  E M    V+++    + +  LQ+  ER D   +T+ DC +LS+ IS  LD 
Sbjct: 7   LHAIIAPEAEAMGLALVRVAFFGGDSDPTLQVMAERPDTRQLTIDDCADLSRRISDRLDA 66

Query: 83  -----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
                ++ I+  YRLEVSSPGIDRP+ R +DF  W GH     +      +Q+  G ++G
Sbjct: 67  LEEAGQDPIDVAYRLEVSSPGIDRPLTRPADFADWAGHEAKIALKEKLDGRQRFNGTLVG 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
                  ++ +     D   ++  + F ++ +A+L++TD+L+ A++
Sbjct: 127 -------IDGDVVTISDKEGVEHKLPFGAIDTAKLVLTDKLIAATV 165


>gi|315497223|ref|YP_004086027.1| hypothetical protein Astex_0175 [Asticcacaulis excentricus CB 48]
 gi|315415235|gb|ADU11876.1| protein of unknown function DUF150 [Asticcacaulis excentricus CB
           48]
          Length = 222

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 10/155 (6%)

Query: 31  PVIEEMSFRSVQISLLEEKN----LLLQIFVERD-DGNMTLRDCEELSQAISPILDVENI 85
           P+ E +    V++ L+          LQI  ER  DG++T+  C  LS+A+S  L+  + 
Sbjct: 17  PIAEALGLDIVRVRLMGSNKPGGPRRLQIMAERKTDGDITVNQCARLSRALSAWLEESDP 76

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I G Y LEVSSPGIDRP+ R  DF  ++G     E+   +  +++  G + GT E G ++
Sbjct: 77  IVGEYILEVSSPGIDRPLTRLKDFDTYSGLEARLELDRLAEGRKRFRGILTGT-EDGEYV 135

Query: 146 EKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +  GE+D       I FD ++ A+L++ DELL+
Sbjct: 136 AIDLEGEEDT----AMIPFDWIIDAKLVLNDELLK 166


>gi|182417563|ref|ZP_02948888.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237668728|ref|ZP_04528712.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182378576|gb|EDT76104.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237657076|gb|EEP54632.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 153

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 70/106 (66%), Gaps = 10/106 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I ++++P+ EE+S++   +  ++E  +  L+I++++++G ++L DCE +S+ +S I
Sbjct: 6   LVEKIENIVRPITEELSYKLYYVEYIKENGDFYLRIYIDKEEGRISLNDCEAVSRRVSEI 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF---------LRWNGHV 116
           LDVE+ IEG Y LEVSSPG++R +  KS F         +R+NG +
Sbjct: 66  LDVEDPIEGAYYLEVSSPGLNRSLHTKSHFESVLDKEVMVRFNGTI 111


>gi|221232983|ref|YP_002515419.1| hypothetical protein CCNA_00044 [Caulobacter crescentus NA1000]
 gi|259585738|sp|B8GX01|RIMP_CAUCN RecName: Full=Ribosome maturation factor rimP
 gi|220962155|gb|ACL93511.1| hypothetical cytosolic protein [Caulobacter crescentus NA1000]
          Length = 191

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 16/165 (9%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL---EEKNLLLQIFVER------DDGNMTLRDCEELSQ 74
           D+  ++ PV E + +  V++ L+   E++ L  QI  E         G+M + DC +LS+
Sbjct: 10  DLIEMLDPVAESLGYEIVRLRLMGGTEQRRL--QIMAEHPLLEDGSGGDMNVEDCAKLSR 67

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD  + I G Y LEVSSPGIDRP+ R  DF  + G     E+   +  +++  G+
Sbjct: 68  AVSEVLDAADPIAGEYTLEVSSPGIDRPLTRLKDFDDYAGLEARIELDRVAEGRKRFKGE 127

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           + G  +    L  E  GE D+    +   F  ++ A+L++TD L+
Sbjct: 128 LAGVEDDQVGLNIE--GEDDVT---VYFPFAWVIDAKLVMTDALM 167


>gi|52842973|ref|YP_096772.1| hypothetical protein lpg2774 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|81376651|sp|Q5ZRV2|RIMP_LEGPH RecName: Full=Ribosome maturation factor rimP
 gi|91208410|sp|Q5X1C1|RIMP_LEGPA RecName: Full=Ribosome maturation factor rimP
 gi|259585808|sp|A5IHU9|RIMP_LEGPC RecName: Full=Ribosome maturation factor rimP
 gi|52630084|gb|AAU28825.1| hypothetical protein lpg2774 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 147

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 10/152 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           D+  +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S+ +S +LDV
Sbjct: 5   DLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAMLDV 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  SE  
Sbjct: 64  EDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDT 123

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L        D+N     I   +++ A L V
Sbjct: 124 IVL--------DINNEHQEILLSNIVKANLTV 147


>gi|206889666|ref|YP_002248540.1| YlxS [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|259645127|sp|B5YJX5|RIMP_THEYD RecName: Full=Ribosome maturation factor rimP
 gi|206741604|gb|ACI20661.1| YlxS [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 164

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 1/88 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K L L+IF++++ G +T++DCE  S+AI  ILDVE+ I+  Y LEVSSPGIDRP+  K D
Sbjct: 35  KGLTLRIFIDKE-GGVTIKDCENFSRAIEAILDVEDPIKSSYTLEVSSPGIDRPLKNKKD 93

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           FLR  G  V         D    IGKI+
Sbjct: 94  FLRNIGRDVKITTKEKIADNTFFIGKIV 121


>gi|254496139|ref|ZP_05109037.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254354626|gb|EET13263.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 147

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 2/123 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++  ++ P I +M +       L + K+ LL+I++++ DG + + DC+++S  +S +LDV
Sbjct: 5   ELEQLLAPTINDMGYELWGCEYLSQGKHSLLRIYIDKADG-IGIEDCQDVSHQVSALLDV 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G+Y LEVSSPGI RP+     + R+ G  V  +      +K+KL+G I+  SE  
Sbjct: 64  EDPIPGNYSLEVSSPGIPRPLFYSWQYQRYIGQSVQIKTFKPVNNKRKLLGTIVSASENS 123

Query: 143 FFL 145
             L
Sbjct: 124 VVL 126


>gi|54298758|ref|YP_125127.1| hypothetical protein lpp2822 [Legionella pneumophila str. Paris]
 gi|53752543|emb|CAH13975.1| hypothetical protein lpp2822 [Legionella pneumophila str. Paris]
          Length = 152

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 10/152 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           D+  +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S+ +S +LDV
Sbjct: 10  DLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAMLDV 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  SE  
Sbjct: 69  EDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDT 128

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L        D+N     I   +++ A L V
Sbjct: 129 IVL--------DINNEHQEILLSNIVKANLTV 152


>gi|291523275|emb|CBK81568.1| Uncharacterized protein conserved in bacteria [Coprococcus catus
           GD/7]
          Length = 154

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 79/136 (58%), Gaps = 2/136 (1%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           +++ P++E   F  V +  ++E  N  L+ ++++++G +T+ DCEE+S+A+S +LD E+ 
Sbjct: 12  AMLMPIVEAKGFELVDVEWVKEGANWYLRAYIDKENG-ITVDDCEEVSRALSDLLDEEDF 70

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I  +Y LEVSSPG+DRP+ ++ DF R  G  V  ++  +   +++ +G +    E    L
Sbjct: 71  ISENYILEVSSPGLDRPLKKEKDFARSIGKDVEVKLFKAINKEKEFVGILKAYDEDTVTL 130

Query: 146 EKEKRGEKDMNELQIA 161
           E E   E       IA
Sbjct: 131 EMEDETEMQFKRSDIA 146


>gi|91205426|ref|YP_537781.1| hypothetical protein RBE_0611 [Rickettsia bellii RML369-C]
 gi|157827029|ref|YP_001496093.1| hypothetical protein A1I_03485 [Rickettsia bellii OSU 85-389]
 gi|91068970|gb|ABE04692.1| unknown [Rickettsia bellii RML369-C]
 gi|157802333|gb|ABV79056.1| hypothetical protein A1I_03485 [Rickettsia bellii OSU 85-389]
          Length = 180

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVE 83
           I+ +IQ  + +M F  V + +    + +++I ++R DD  +T+ DC + S  IS ILDVE
Sbjct: 20  ITDLIQETLSDMGFELVLVRVKGLSSKVVEILIDRLDDQKVTIEDCTKASNTISAILDVE 79

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEVSS G++RP+V+  ++ R+ G  V  ++      + +  G I+   +   
Sbjct: 80  DLIEEAYYLEVSSSGVERPLVKFENYKRFIGREVKIKLKELLNGRSRYQGTIIEAKDDKV 139

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E +        ++ I++D + SA L++T+E+ +  L
Sbjct: 140 YLKWEDQ--------EVIINYDLIKSANLVLTEEMFKKLL 171


>gi|126253833|sp|Q1RIX2|RIMP_RICBR RecName: Full=Ribosome maturation factor rimP
 gi|259586219|sp|A8GW29|RIMP_RICB8 RecName: Full=Ribosome maturation factor rimP
          Length = 168

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVE 83
           I+ +IQ  + +M F  V + +    + +++I ++R DD  +T+ DC + S  IS ILDVE
Sbjct: 8   ITDLIQETLSDMGFELVLVRVKGLSSKVVEILIDRLDDQKVTIEDCTKASNTISAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEVSS G++RP+V+  ++ R+ G  V  ++      + +  G I+   +   
Sbjct: 68  DLIEEAYYLEVSSSGVERPLVKFENYKRFIGREVKIKLKELLNGRSRYQGTIIEAKDDKV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E +        ++ I++D + SA L++T+E+ +  L
Sbjct: 128 YLKWEDQ--------EVIINYDLIKSANLVLTEEMFKKLL 159


>gi|148361088|ref|YP_001252295.1| hypothetical protein LPC_3059 [Legionella pneumophila str. Corby]
 gi|148282861|gb|ABQ56949.1| conserved hypothetical protein; DUF150 [Legionella pneumophila str.
           Corby]
          Length = 140

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 10/148 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S+ +S +LDVE+ I
Sbjct: 2   LLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAMLDVEDPI 60

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  SE    L 
Sbjct: 61  PGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVL- 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLIV 174
                  D+N     I   +++ A L V
Sbjct: 120 -------DINNEHQEILLSNIVKANLTV 140


>gi|34223001|sp|Q9AC22|RIMP_CAUCR RecName: Full=Ribosome maturation factor rimP
          Length = 178

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 16/161 (9%)

Query: 28  VIQPVIEEMSFRSVQISLL---EEKNLLLQIFVER------DDGNMTLRDCEELSQAISP 78
           ++ PV E + +  V++ L+   E++ L  QI  E         G+M + DC +LS+A+S 
Sbjct: 1   MLDPVAESLGYEIVRLRLMGGTEQRRL--QIMAEHPLLEDGSGGDMNVEDCAKLSRAVSE 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I G Y LEVSSPGIDRP+ R  DF  + G     E+   +  +++  G++ G 
Sbjct: 59  VLDAADPIAGEYTLEVSSPGIDRPLTRLKDFDDYAGLEARIELDRVAEGRKRFKGELAGV 118

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
            +    L  E  GE D+    +   F  ++ A+L++TD L+
Sbjct: 119 EDDQVGLNIE--GEDDVT---VYFPFAWVIDAKLVMTDALM 154


>gi|323701862|ref|ZP_08113532.1| protein of unknown function DUF150 [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533166|gb|EGB23035.1| protein of unknown function DUF150 [Desulfotomaculum nigrificans
           DSM 574]
          Length = 153

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +++ I+P++EE     V +  ++E  N  L++F+++  G + L DC+ LS+ +  +LD  
Sbjct: 10  VTAAIEPIVEESKLELVNVEYVKEGGNWYLRVFIDKP-GGVDLDDCQMLSEKLDKLLDEL 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPGI+RP+ +  DF R+ GH+V           +   GK+ G +E G 
Sbjct: 69  DPIPQAYFLEVSSPGIERPLKKPEDFERFMGHLVNITTYTPIDGAKSFTGKLQGYTEAG- 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E E +G+       + I  D + ++RL V
Sbjct: 128 -IEIEVKGK------PMLIPHDRVATSRLAV 151


>gi|87200506|ref|YP_497763.1| hypothetical protein Saro_2493 [Novosphingobium aromaticivorans DSM
           12444]
 gi|123488750|sp|Q2G5E4|RIMP_NOVAD RecName: Full=Ribosome maturation factor rimP
 gi|87136187|gb|ABD26929.1| protein of unknown function DUF150 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 186

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 19/177 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-----EKNLLLQIFVER-DDGNMTLRDCEELSQAISP 78
           I  V++P  + + F  V++   +     ++   LQI  ER D G + + DC  LS+ +S 
Sbjct: 7   IIEVVEPEAKALGFDLVRVRYFKGGEIGDEEHTLQIMAERPDTGQLVIEDCAALSRRVSD 66

Query: 79  ILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             D      + +IE  YRLEVSSPGIDRP+ R  DF  W GH    E+     ++++  G
Sbjct: 67  RFDELEEAGDVLIEDAYRLEVSSPGIDRPLTRAKDFAAWIGHEARVELSELLDNRKRFRG 126

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNYGS 188
           ++ G       +  E  G      +   + FD + +A+LI+TD+L+ AS  L+  G+
Sbjct: 127 ELKGFDAETQAISIEDDG------VVFEVPFDLVSNAKLILTDKLIAASRPLDTSGA 177


>gi|296285013|ref|ZP_06863011.1| hypothetical protein CbatJ_15405 [Citromicrobium bathyomarinum
           JL354]
          Length = 188

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 19/176 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE----EKNLLLQIFVERD-DGNMTLRDCEELSQAISPI 79
           ++ +I+P  + + F  V++ ++     +    LQI  E    G + +  C  LS+A+S  
Sbjct: 7   LTQIIEPEAQALGFELVRVKMMPSEAGDGTQALQIMAEDPATGQLVIEQCAALSRAVSAK 66

Query: 80  LDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +D      + +IEG Y LEVSSPGIDRP+ R  DF  W GH     +      ++   G 
Sbjct: 67  IDALEEQGDVLIEGAYHLEVSSPGIDRPLTRTKDFSDWAGHEAKISMAKGYDGQRNYRGS 126

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNYGS 188
           + G       +   K G+       + +  D + SA+L++TDEL+ A+  L+  G+
Sbjct: 127 LKGIEGDMVTITDRKAGD-------VELPRDQIHSAQLVLTDELIAATRPLDTTGA 175


>gi|294085150|ref|YP_003551910.1| hypothetical protein SAR116_1583 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664725|gb|ADE39826.1| hypothetical protein SAR116_1583 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 177

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL--EEKNLLLQIFVER-DDGNMTLRDCEELSQAISPILD 81
           +S +I+  +E++ F+ V++  +        LQI  E  +D  MT+ DC++LS+ I+ +LD
Sbjct: 17  VSKIIEAAVEDLGFQLVRVLFMGGNSGRNQLQIMAEPVEDREMTVEDCKKLSRHIAALLD 76

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPGIDRP+ +  D+ R+ G +    + +    +++  G++ G  + 
Sbjct: 77  VEDPISSAYVLEVSSPGIDRPLTKIEDYERFEGELAKINLRMMRDGRRRFNGRLNGFDDE 136

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G  + +   G       + A +FD + SAR+
Sbjct: 137 GKIVLETTFG-------RFAFAFDEIDSARI 160


>gi|295687484|ref|YP_003591177.1| hypothetical protein Cseg_0027 [Caulobacter segnis ATCC 21756]
 gi|295429387|gb|ADG08559.1| protein of unknown function DUF150 [Caulobacter segnis ATCC 21756]
          Length = 196

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 16/165 (9%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL---EEKNLLLQIFVER------DDGNMTLRDCEELSQ 74
           D+  ++ PV E + +  V++ L+   E++ L  QI  E         G+M + DC  LS+
Sbjct: 10  DLIEMLDPVAESLGYEIVRLRLMGGAEQRRL--QIMAEHPLLEDGTGGDMNVEDCARLSR 67

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS ILD  + I G Y LEVSSPG+DRP+ R  DF  + G     E+   +  +++  G+
Sbjct: 68  GISEILDAADPIAGEYTLEVSSPGVDRPLTRLKDFEDYAGLEARIELDRVAEGRKRFKGE 127

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           + G  +    L  E  GE D+    +   F  ++ A+L++TD L+
Sbjct: 128 LAGIEDDQVGLNIE--GEDDVT---VYFPFAWIIDAKLVMTDTLM 167


>gi|326794268|ref|YP_004312088.1| ribosome maturation factor rimP [Marinomonas mediterranea MMB-1]
 gi|326545032|gb|ADZ90252.1| Ribosome maturation factor rimP [Marinomonas mediterranea MMB-1]
          Length = 153

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 73/116 (62%), Gaps = 2/116 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           I  +I+PV+E + F+   +  + + K+ +L+IF+E D +  + + DC ++S+ +S ILDV
Sbjct: 8   IEELIRPVVEGLGFQFWGMEYISQGKHSVLRIFIETDKEKGIDVEDCAQVSRQVSSILDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           E+ I G Y LEVSSPG+DRP+   S +  + G VVA ++ +    ++K  G++ G 
Sbjct: 68  EDPITGEYNLEVSSPGLDRPLFELSQYESYVGSVVALKLRVPFDGRRKFKGQLTGV 123


>gi|114321099|ref|YP_742782.1| hypothetical protein Mlg_1950 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227493|gb|ABI57292.1| protein of unknown function DUF150 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 176

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 9/151 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++I P++  M +  V I         LL+I+++  DG +TL DCE  S+ IS +LDVE
Sbjct: 32  LYALIDPLLTGMGYELVGIEYGGPAGKRLLRIYIDSPDG-ITLDDCETCSRQISAVLDVE 90

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G Y LE+SSPG+DRP+ + SD+ R+ G  +   +      +++  G + G  + G 
Sbjct: 91  DPIPGEYTLEISSPGLDRPIFKASDYDRFAGEQIKIRLSAPWEGRRRFKGVLAGLGDEGV 150

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +  E +G+      ++ I  D +  ARLI+
Sbjct: 151 RV-VEAQGD------EVQIPLDLIEKARLIL 174


>gi|125973510|ref|YP_001037420.1| hypothetical protein Cthe_0995 [Clostridium thermocellum ATCC
           27405]
 gi|256003328|ref|ZP_05428319.1| protein of unknown function DUF150 [Clostridium thermocellum DSM
           2360]
 gi|281417713|ref|ZP_06248733.1| protein of unknown function DUF150 [Clostridium thermocellum JW20]
 gi|259585742|sp|A3DE48|RIMP_CLOTH RecName: Full=Ribosome maturation factor rimP
 gi|125713735|gb|ABN52227.1| protein of unknown function DUF150 [Clostridium thermocellum ATCC
           27405]
 gi|255992618|gb|EEU02709.1| protein of unknown function DUF150 [Clostridium thermocellum DSM
           2360]
 gi|281409115|gb|EFB39373.1| protein of unknown function DUF150 [Clostridium thermocellum JW20]
 gi|316940251|gb|ADU74285.1| protein of unknown function DUF150 [Clostridium thermocellum DSM
           1313]
          Length = 154

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 76/124 (61%), Gaps = 2/124 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +  PV+ + SF  V +  ++E  +  L+I++++  G +T+ DC+ +S+ IS ILD E
Sbjct: 10  VTEIANPVVNKHSFELVDVEFIKEGSSWYLRIYIDKP-GGITIDDCQVVSEEISDILDKE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+ ++SDF R+ G +V  ++      K+   G+++G  +   
Sbjct: 69  DPIPHSYFLEVSSPGLDRPLKKESDFERFKGELVEVKVFKPIEGKKIFEGELVGYKDNKI 128

Query: 144 FLEK 147
            ++K
Sbjct: 129 IIKK 132


>gi|313892594|ref|ZP_07826181.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
 gi|313118991|gb|EFR42196.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
          Length = 156

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 64/97 (65%), Gaps = 1/97 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + ++IQPV+E+     V +  + E+N +L+IF+++D G + L DC+E+S +   ++D  +
Sbjct: 10  VEALIQPVLEKKGIEVVDVEYVRERNWILRIFIDKD-GGVDLNDCQEISVSAGELIDKND 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           +I  +Y LEVSSPGIDR + +  DF+R+    V+ ++
Sbjct: 69  LISDNYMLEVSSPGIDRVLKKDKDFIRYKDSKVSVKL 105


>gi|329121256|ref|ZP_08249883.1| hypothetical protein HMPREF9083_0344 [Dialister micraerophilus DSM
           19965]
 gi|327470190|gb|EGF15653.1| hypothetical protein HMPREF9083_0344 [Dialister micraerophilus DSM
           19965]
          Length = 156

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 64/97 (65%), Gaps = 1/97 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + ++IQPV+E+     V +  + E+N +L+IF+++D G + L DC+E+S +   ++D  +
Sbjct: 10  VEALIQPVLEKKGIEVVDVEYVRERNWILRIFIDKD-GGVDLNDCQEISVSAGELIDKND 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           +I  +Y LEVSSPGIDR + +  DF+R+    V+ ++
Sbjct: 69  LISDNYMLEVSSPGIDRVLKKDKDFIRYKDSKVSVKL 105


>gi|259585707|sp|Q0A795|RIMP_ALHEH RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 9/149 (6%)

Query: 27  SVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++I P++  M +  V I         LL+I+++  DG +TL DCE  S+ IS +LDVE+ 
Sbjct: 10  ALIDPLLTGMGYELVGIEYGGPAGKRLLRIYIDSPDG-ITLDDCETCSRQISAVLDVEDP 68

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I G Y LE+SSPG+DRP+ + SD+ R+ G  +   +      +++  G + G  + G  +
Sbjct: 69  IPGEYTLEISSPGLDRPIFKASDYDRFAGEQIKIRLSAPWEGRRRFKGVLAGLGDEGVRV 128

Query: 146 EKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E +G+      ++ I  D +  ARLI+
Sbjct: 129 -VEAQGD------EVQIPLDLIEKARLIL 150


>gi|254419012|ref|ZP_05032736.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
 gi|196185189|gb|EDX80165.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
          Length = 199

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 8/155 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVENI 85
           +I P+ E +    V++ L+   K   LQI  ER  D ++++  C +LS+A+S + D  + 
Sbjct: 14  LIDPIAESLGLEVVRVRLMTGSKRQRLQIMAERPSDHDISVEQCAKLSRAVSEVFDAADP 73

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I G Y LEVSSPGIDRP+ R  DF  + G     E       +++  G + G  +    +
Sbjct: 74  IAGEYMLEVSSPGIDRPLTRPLDFDLFEGEEARLETDRMIEGRKRFKGVLAGYEDGNVLI 133

Query: 146 EKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           + +   E  +      I FD L  A+L++TD L++
Sbjct: 134 DLDGEDETAL------IPFDWLSDAKLVLTDALMK 162


>gi|332188274|ref|ZP_08390001.1| hypothetical protein SUS17_3404 [Sphingomonas sp. S17]
 gi|332011670|gb|EGI53748.1| hypothetical protein SUS17_3404 [Sphingomonas sp. S17]
          Length = 192

 Score = 77.4 bits (189), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 14/166 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDV 82
           ++ +I+P  + + F  V++ +     +  LQ+  ER D   + + DC +LS+ IS ++D 
Sbjct: 7   LTQLIEPEAKALGFELVRVKMYGGTSDPTLQVMAERPDTRQLNIDDCADLSRRISDVMDA 66

Query: 83  -----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
                 + I+  YRLEVSSPGIDRP+ R  DF  W GH     +      +++  G + G
Sbjct: 67  LEEQGRDPIDHAYRLEVSSPGIDRPLTRLKDFADWAGHEARITLAEKLNGRKQFKGDLAG 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
                  +        D  E++  + F ++  A+L++TD L+ A++
Sbjct: 127 IEGDNVII-------VDGEEVRHKLPFAAIEDAKLVMTDRLIAATV 165


>gi|54295604|ref|YP_128019.1| hypothetical protein lpl2691 [Legionella pneumophila str. Lens]
 gi|53755436|emb|CAH16932.1| hypothetical protein lpl2691 [Legionella pneumophila str. Lens]
          Length = 152

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 10/152 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           D+  +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S+ +S +LDV
Sbjct: 10  DLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAMLDV 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  S   
Sbjct: 69  EDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASGDT 128

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L        D+N     I   +++ A L V
Sbjct: 129 IVL--------DINNEHQEILLSNIVKANLTV 152


>gi|91208407|sp|Q5WT34|RIMP_LEGPL RecName: Full=Ribosome maturation factor rimP
          Length = 147

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 10/152 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           D+  +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S+ +S +LDV
Sbjct: 5   DLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAMLDV 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  S   
Sbjct: 64  EDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASGDT 123

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L        D+N     I   +++ A L V
Sbjct: 124 IVL--------DINNEHQEILLSNIVKANLTV 147


>gi|332141180|ref|YP_004426918.1| hypothetical protein MADE_1008910 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|259585705|sp|B4RXT6|RIMP_ALTMD RecName: Full=Ribosome maturation factor rimP
 gi|327551202|gb|AEA97920.1| hypothetical protein MADE_1008910 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 152

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 81/140 (57%), Gaps = 8/140 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++P +E + F  V I  +   K+ +L++F++ ++G +T+ DC ++S  +S ILDVE
Sbjct: 8   LTEMLEPGVEALGFELVGIEFVRAGKHSILRVFIDHENG-ITVDDCADVSHQVSAILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+ ++  ++   G VV   + +   D++   GK++   E G 
Sbjct: 67  DPISTEYNLEVSSPGMDRPLFKEKHYIESVGEVVQVRLSMPMDDRRNFKGKVLAC-ENGM 125

Query: 144 FLEKEKRGEKDMNELQIAIS 163
                   E D  + Q+A++
Sbjct: 126 V-----SIEVDGQQFQLAVA 140


>gi|148263955|ref|YP_001230661.1| hypothetical protein Gura_1898 [Geobacter uraniireducens Rf4]
 gi|189030115|sp|A5GF83|RIMP_GEOUR RecName: Full=Ribosome maturation factor rimP
 gi|146397455|gb|ABQ26088.1| protein of unknown function DUF150 [Geobacter uraniireducens Rf4]
          Length = 159

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 13/131 (9%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E + ++L++FV+++ G + L DC  +S+ +S +LDVE++I  HY LEVSSPGIDRP+ + 
Sbjct: 33  EGREMVLRLFVDKE-GGVNLDDCASVSRELSEVLDVEDVISEHYSLEVSSPGIDRPLKKV 91

Query: 107 SDFLRWNGHVVACE----IVLSSGDKQK-LIGKIMGTSETGFFLEKEKRGEKDMNELQIA 161
            DF R+ G +V       +   +G+K+K  +G++ G  E G  L   K G+        A
Sbjct: 92  EDFQRFKGRLVKIRTFEPLPDDAGNKRKTFLGELKGI-ENGVVLVALKEGQ------NAA 144

Query: 162 ISFDSLLSARL 172
           I F+ +  A L
Sbjct: 145 IPFEKVAKANL 155


>gi|239997163|ref|ZP_04717687.1| hypothetical protein AmacA2_22177 [Alteromonas macleodii ATCC
           27126]
          Length = 152

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 81/140 (57%), Gaps = 8/140 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++P +E + F  V I  +   K+ +L++F++ ++G +T+ DC ++S  +S ILDVE
Sbjct: 8   LTEMLEPGVEALGFELVGIEFVRAGKHSILRVFIDHENG-ITVDDCADVSHQVSAILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+ ++  ++   G VV   + +   D++   GK++   E G 
Sbjct: 67  DPISTEYNLEVSSPGMDRPLFKEKHYIESVGEVVQIRLSMPMDDRRNFKGKVLAC-ENGI 125

Query: 144 FLEKEKRGEKDMNELQIAIS 163
                   E D  + Q+A++
Sbjct: 126 V-----SIEVDGQQFQLAVA 140


>gi|189424725|ref|YP_001951902.1| hypothetical protein Glov_1666 [Geobacter lovleyi SZ]
 gi|226736404|sp|B3EAE4|RIMP_GEOLS RecName: Full=Ribosome maturation factor rimP
 gi|189420984|gb|ACD95382.1| protein of unknown function DUF150 [Geobacter lovleyi SZ]
          Length = 159

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 65/97 (67%), Gaps = 2/97 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++QP+++ M    V++   +  ++ LL++F+++ DG + L DC E+S+ +S  LDVE
Sbjct: 10  VETLLQPILDAMGLELVELEFKKVGRSYLLRVFIDKPDG-VNLDDCAEVSRELSVQLDVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           + I   Y LEVSSPG+DRP+ ++ DF+R+ G +   +
Sbjct: 69  DCIASRYTLEVSSPGLDRPLKKEQDFIRYQGRLAVVK 105


>gi|329847355|ref|ZP_08262383.1| hypothetical protein ABI_04190 [Asticcacaulis biprosthecum C19]
 gi|328842418|gb|EGF91987.1| hypothetical protein ABI_04190 [Asticcacaulis biprosthecum C19]
          Length = 205

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 11/158 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKN----LLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           +  P+  E+    V++ L+          LQI  ER  DG + +  C  LS+A+S  LD 
Sbjct: 14  IFDPIANELGLNIVRVRLMGSNKPGGARRLQIMAERQSDGEINVNQCARLSRALSAFLDE 73

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I G Y LEVSSPGIDRP+ R  DF  + G+    E+   +  +++  G + G     
Sbjct: 74  ADPISGDYVLEVSSPGIDRPLTRLKDFETYQGYEARIELDRLAEGRKRFRGTLAGVEGDH 133

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             ++ E   E  +      + F  ++ A+L++TDEL++
Sbjct: 134 IAIDLEGEPETAL------MPFAWVIDAKLVLTDELMK 165


>gi|300854497|ref|YP_003779481.1| hypothetical protein CLJU_c13110 [Clostridium ljungdahlii DSM
           13528]
 gi|300434612|gb|ADK14379.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 154

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 84/149 (56%), Gaps = 9/149 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S++IQP++  +++    +   +E  N  L+I++++ +GN++L DCE +S+A+S +LD E
Sbjct: 10  MSALIQPIVNNLNYELYYLEFKKEGNNNYLRIYIDKKEGNISLEDCESVSRAVSDMLDKE 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+  Y LEVSSPG++R +  +    R+ G+ V   I      K+K  G+++  +    
Sbjct: 70  DPIKDPYYLEVSSPGVERKLYTEEHLKRYIGYSVQVNISGLLKGKKKYEGELLDFNSNEL 129

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            ++ E        E  IAI  D +L+  L
Sbjct: 130 KIKCE--------EEDIAIPRDKILNVNL 150


>gi|329891252|ref|ZP_08269595.1| hypothetical protein BDIM_29650 [Brevundimonas diminuta ATCC 11568]
 gi|328846553|gb|EGF96117.1| hypothetical protein BDIM_29650 [Brevundimonas diminuta ATCC 11568]
          Length = 198

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 8/155 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERD-DGNMTLRDCEELSQAISPILDVENI 85
           +I PV E +    V++ L+       LQI  ER  D ++++ +C  LS+A+S +LD  + 
Sbjct: 14  LIDPVAESLGLAVVRVRLMGGTLRRRLQIMAERQTDHDISVEECARLSRAVSEVLDAADP 73

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I G Y LEVSSPGIDRP+ R  DF  + G     E       +++  G + GT      +
Sbjct: 74  ISGEYLLEVSSPGIDRPLTRLIDFDLFEGLEARLETDRMVEGRKRFKGVVAGTEGENIAI 133

Query: 146 EKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           + +   E  +      I F  L  A+L++TDELL+
Sbjct: 134 DLDGEDETAL------IPFAWLADAKLVLTDELLK 162


>gi|253581489|ref|ZP_04858714.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
 gi|251836559|gb|EES65094.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
          Length = 159

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
           +    +   I +++ PV+ EM    V I  L++     ++I+VE  +G++TL DC  +S 
Sbjct: 4   YNKENILKKIETIVTPVVNEMKLSLVDIEYLQDGGYWYVRIYVENLEGDITLEDCATISN 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +    D++ +IE  + LEVSSPGI+RP+ +  D++R+ G      +     D +   G 
Sbjct: 64  KVDE--DIDKLIEQRFFLEVSSPGIERPLKKIDDYIRFKGEKAKLSLKHKVNDNKNFEGI 121

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           I+   ++  +LE E       NE  I I F  +  A L+
Sbjct: 122 IIDCRDSIIYLEVE-------NEKIIEIPFSEVRKANLV 153


>gi|296108418|ref|YP_003620119.1| putative protein conserved in bacteria [Legionella pneumophila
           2300/99 Alcoy]
 gi|295650320|gb|ADG26167.1| putative protein conserved in bacteria [Legionella pneumophila
           2300/99 Alcoy]
 gi|307611646|emb|CBX01333.1| hypothetical protein LPW_30281 [Legionella pneumophila 130b]
          Length = 131

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 9/130 (6%)

Query: 45  LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMV 104
           L + K+ LL+I++++ DG + + DC+E+S+ +S +LDVE+ I GHY LE+SSPGI RP+ 
Sbjct: 11  LSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAMLDVEDPIPGHYSLEISSPGIPRPLF 69

Query: 105 RKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISF 164
               + R+ G+ +  +       K+KL G I+  SE    L        D+N     I  
Sbjct: 70  SIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVL--------DINNEHQEILL 121

Query: 165 DSLLSARLIV 174
            +++ A L V
Sbjct: 122 SNIVKANLTV 131


>gi|92115191|ref|YP_575119.1| hypothetical protein Csal_3076 [Chromohalobacter salexigens DSM
           3043]
 gi|122419134|sp|Q1QSY8|RIMP_CHRSD RecName: Full=Ribosome maturation factor rimP
 gi|91798281|gb|ABE60420.1| protein of unknown function DUF150 [Chromohalobacter salexigens DSM
           3043]
          Length = 153

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 2/115 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++I+PV+  M F    +  L + K+  L I++E  DG +T+ DC  +S+ +S +LDVE
Sbjct: 8   LKALIEPVVTAMGFELWGVDYLSQGKHSRLVIYIESADG-VTVDDCAAVSRQVSGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           + I G YRLEVSSPG+DRP+     F  + G  V  ++      ++K  G++ G 
Sbjct: 67  DPISGEYRLEVSSPGMDRPLFTLEQFASFKGSHVKVKLSTPFEGRRKFQGQLAGV 121


>gi|206900815|ref|YP_002250929.1| YlxS [Dictyoglomus thermophilum H-6-12]
 gi|259585753|sp|B5YEH1|RIMP_DICT6 RecName: Full=Ribosome maturation factor rimP
 gi|206739918|gb|ACI18976.1| YlxS [Dictyoglomus thermophilum H-6-12]
          Length = 156

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  +++P+ E+ S+  V +    E +  +L++++++  G +T+ DC  LS+ IS
Sbjct: 7   MEFYKKLKEIVEPICEKYSYELVDLEYRREPHGWVLRVYIDKV-GGVTVEDCAYLSEKIS 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+++ I   Y LEVSSPG+DRP+ RK DF R  G  V   ++     K+K  GKI  
Sbjct: 66  KELDIKDPIPHSYILEVSSPGLDRPLKRKRDFERHMGEKVNITLLEEIEGKKKFEGKIFK 125

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E+   L+        +++  + I  + +  A LIV
Sbjct: 126 VDESSVTLK--------IDDSFVTIPLEKIKKAMLIV 154


>gi|87119793|ref|ZP_01075690.1| hypothetical protein MED121_07630 [Marinomonas sp. MED121]
 gi|86165269|gb|EAQ66537.1| hypothetical protein MED121_07630 [Marinomonas sp. MED121]
          Length = 153

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 69/112 (61%), Gaps = 2/112 (1%)

Query: 29  IQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMT-LRDCEELSQAISPILDVENII 86
           I+PV+E + +R   +  + + K+ +L++F+E D  N T + DC ++S+ +S ILDVE+ I
Sbjct: 12  IRPVVEGLGYRFWGLEYISQGKDSVLRVFIESDSENGTDIEDCAKVSRQVSSILDVEDPI 71

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            G Y LEVSSPG+DRP+   + F  + G +V+  + +    ++K  G++   
Sbjct: 72  TGEYNLEVSSPGLDRPLFELAQFEEYIGAIVSLRLRVPFDGRRKFKGQLTAV 123


>gi|16124301|ref|NP_418865.1| hypothetical protein CC_0045 [Caulobacter crescentus CB15]
 gi|13421139|gb|AAK22033.1| conserved hypothetical protein [Caulobacter crescentus CB15]
          Length = 160

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G+M + DC +LS+A+S +LD  + I G Y LEVSSPGIDRP+ R  DF  + G     E+
Sbjct: 24  GDMNVEDCAKLSRAVSEVLDAADPIAGEYTLEVSSPGIDRPLTRLKDFDDYAGLEARIEL 83

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
              +  +++  G++ G  +    L  E  GE D+    +   F  ++ A+L++TD L+
Sbjct: 84  DRVAEGRKRFKGELAGVEDDQVGLNIE--GEDDVT---VYFPFAWVIDAKLVMTDALM 136


>gi|239946886|ref|ZP_04698639.1| UPF0090 protein [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921162|gb|EER21186.1| UPF0090 protein [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 166

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVE 83
           I++VI+  + +M F  V +        +++I ++  +G  +++ DC + S+ IS ILDVE
Sbjct: 8   ITNVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNGEKISVEDCTKASRTISAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEVSS G++RP+V+  ++ R++G  V  ++      K +  GKI+       
Sbjct: 68  DLIEDTYSLEVSSSGLERPLVKFENYNRFSGREVKIKLKELLNGKTRYQGKIIKAENNKI 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E        E ++ I +D + +A L++T+E+ +  L
Sbjct: 128 YLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLL 159


>gi|197121570|ref|YP_002133521.1| hypothetical protein AnaeK_1159 [Anaeromyxobacter sp. K]
 gi|259585696|sp|B4UHF7|RIMP_ANASK RecName: Full=Ribosome maturation factor rimP
 gi|196171419|gb|ACG72392.1| protein of unknown function DUF150 [Anaeromyxobacter sp. K]
          Length = 171

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 12/125 (9%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G+  +A  + S+++PV+E   +  V++          L++F+++  G + + DC+ +S+
Sbjct: 4   IGEQSIAEQVRSLLEPVLERDGYELVEVEWARLAGRWTLRVFIDKA-GGVGIDDCQAVSK 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            + PILDV ++IE  Y LEVSSPG+DRP+ +  DF R+ G  V            K  G 
Sbjct: 63  TVEPILDVADVIEPAYDLEVSSPGLDRPLRKPRDFDRYAGQRVHV----------KAYGP 112

Query: 135 IMGTS 139
           + GT+
Sbjct: 113 VAGTA 117


>gi|261856065|ref|YP_003263348.1| hypothetical protein Hneap_1469 [Halothiobacillus neapolitanus c2]
 gi|261836534|gb|ACX96301.1| protein of unknown function DUF150 [Halothiobacillus neapolitanus
           c2]
          Length = 166

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I +++QPV+E      V        + LL+++++ + G +TL DC ++S A+S +LDVE+
Sbjct: 8   IEALLQPVVEAAGCAWVGGEFRGGPDGLLRVYIDTEAG-VTLDDCTKVSDALSGVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
              G YRLEVSSPG++RPM R SDF  + G  V
Sbjct: 67  PFPGFYRLEVSSPGVERPMFRASDFALFIGQKV 99


>gi|153954052|ref|YP_001394817.1| hypothetical protein CKL_1427 [Clostridium kluyveri DSM 555]
 gi|219854665|ref|YP_002471787.1| hypothetical protein CKR_1322 [Clostridium kluyveri NBRC 12016]
 gi|189038691|sp|A5N838|RIMP_CLOK5 RecName: Full=Ribosome maturation factor rimP
 gi|254800038|sp|B9E1J8|RIMP_CLOK1 RecName: Full=Ribosome maturation factor rimP
 gi|146346933|gb|EDK33469.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219568389|dbj|BAH06373.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 154

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 1/122 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +I+P+++ ++F    +    E  N  L+IF+++++GN++L DCE +S+A+S I
Sbjct: 6   LVERVLKLIKPIVDNLNFELYHLEFKREGNNNYLRIFIDKEEGNISLEDCEAVSRAVSDI 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ I   Y LEVSSPGI+R +       R+ G  V   I      K+K  GK++   
Sbjct: 66  LDREDPIRDPYYLEVSSPGIERTLYTHEHLKRYIGFNVIVNIQGLLKGKKKYQGKLLSFD 125

Query: 140 ET 141
           E+
Sbjct: 126 ES 127


>gi|88812962|ref|ZP_01128205.1| hypothetical protein NB231_03777 [Nitrococcus mobilis Nb-231]
 gi|88789740|gb|EAR20864.1| hypothetical protein NB231_03777 [Nitrococcus mobilis Nb-231]
          Length = 150

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 71/114 (62%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ V++PV+  M +  V I     K+  LL+I++++ DG +++ DC  +S  IS +LDVE
Sbjct: 7   LTKVVEPVVAAMGYELVGIEYRPSKSQALLRIYIDKADG-ISVEDCALVSNQISGVLDVE 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + + G Y LEVSSPG+ RP+ + SD+ R+ G +V   I  +   ++++ G + G
Sbjct: 66  DPLSGRYTLEVSSPGLRRPIFKASDYERFAGELVHIRIRGTLDGRRRIHGLLRG 119


>gi|303240819|ref|ZP_07327332.1| protein of unknown function DUF150 [Acetivibrio cellulolyticus CD2]
 gi|302591707|gb|EFL61442.1| protein of unknown function DUF150 [Acetivibrio cellulolyticus CD2]
          Length = 153

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++   +PV+    F  V +  ++E  N  L+I++++  G +T+ DC+ +S+ IS ILD +
Sbjct: 10  VAEFAEPVVANHYFELVDVEFIKEGTNWYLRIYIDKP-GGITIDDCQIISEEISDILDKK 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + IE  Y LEVSSPG+DRP+ ++SDF R+ G +V  ++      ++   G ++G
Sbjct: 69  DPIEQSYFLEVSSPGLDRPLKKESDFERFKGELVEVKVFKPIDGRKIFEGNLLG 122


>gi|121998530|ref|YP_001003317.1| hypothetical protein Hhal_1751 [Halorhodospira halophila SL1]
 gi|166980218|sp|A1WXV3|RIMP_HALHL RecName: Full=Ribosome maturation factor rimP
 gi|121589935|gb|ABM62515.1| protein of unknown function DUF150 [Halorhodospira halophila SL1]
          Length = 151

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 87/149 (58%), Gaps = 9/149 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + S+++P +  + +  V + L   K N  L+++++   G + L DCE +S  +S +LDVE
Sbjct: 7   LHSLLEPTVTGLGYELVGVELTGAKGNRTLRVYIDTPAG-IRLEDCEAVSHQVSGLLDVE 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + IEG Y LEVSSPG+DRP+ + +D+ R++G  +   ++     ++++ G ++G      
Sbjct: 66  DPIEGAYNLEVSSPGLDRPIFKSADYDRFSGERIKLRLLELYEGRRRVKGVLLG------ 119

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L+ E    +D++ +++ I  + +  ARL
Sbjct: 120 -LDGEFVRVRDVDGVELRIPLELIDRARL 147


>gi|309389229|gb|ADO77109.1| protein of unknown function DUF150 [Halanaerobium praevalens DSM
           2228]
          Length = 155

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 72/114 (63%), Gaps = 1/114 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  ++  + P+ +  +   + +  L+E  + +L+IF+E  +G +T+ +CE++S+++S I
Sbjct: 7   VAETVTDFVLPIAQSENLNLIDVEFLKEGSDWILRIFLENKNGELTIEECEKVSRSLSMI 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           LD E+ I+  Y LEVSSPG++RP+  + DF R+ G ++A +       +++ +G
Sbjct: 67  LDEEDPIDKSYILEVSSPGLERPLKTEEDFERFKGELIAVKTFKKIEGQKEFVG 120


>gi|254787151|ref|YP_003074580.1| hypothetical protein TERTU_3219 [Teredinibacter turnerae T7901]
 gi|259645124|sp|C5BPW1|RIMP_TERTT RecName: Full=Ribosome maturation factor rimP
 gi|237686402|gb|ACR13666.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
          Length = 152

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 3/129 (2%)

Query: 20  GLAGDISSVIQPVIE--EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           G    +  +I PV+E  E     ++ S+ + +  +L+IF+++    + + DCE++S+ +S
Sbjct: 3   GKHTQLEELIAPVVESLECELWGLEYSV-QGRRSMLRIFIDKQPDGVLVEDCEKVSRQVS 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G Y LEVSSPG+DRP+ + + F  + GH VA  + ++   ++K  G + G
Sbjct: 62  SVLDVEDPISGEYTLEVSSPGMDRPLFKLAHFELYVGHRVALRLRVAFEGRRKFQGLLKG 121

Query: 138 TSETGFFLE 146
             +    LE
Sbjct: 122 IEDGEIVLE 130


>gi|157825876|ref|YP_001493596.1| hypothetical protein A1C_04075 [Rickettsia akari str. Hartford]
 gi|166979960|sp|A8GNW3|RIMP_RICAH RecName: Full=Ribosome maturation factor rimP
 gi|157799834|gb|ABV75088.1| hypothetical protein A1C_04075 [Rickettsia akari str. Hartford]
          Length = 166

 Score = 74.3 bits (181), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 90/160 (56%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVE 83
           I++VI+  + +M F  V I      + +++I ++  +G  +++ DC + S  IS ILDVE
Sbjct: 8   ITNVIEKSLTDMGFELVLIKFKGVNHKVVEILIDSLNGEKISVADCTKASSTISAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEV+S G++RP+V+  ++ R+ G  V  ++      K +  GKI+       
Sbjct: 68  DLIEDAYSLEVASSGLERPLVKFENYNRFLGREVKVKLKELLNGKTRYQGKIIKAENNKV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E +        ++ I +D + +A L++T+E+L+  L
Sbjct: 128 YLKCEAQ--------EVLIDYDLIKNANLVLTEEVLKKLL 159


>gi|162454077|ref|YP_001616444.1| hypothetical protein sce5801 [Sorangium cellulosum 'So ce 56']
 gi|259586198|sp|A9G896|RIMP_SORC5 RecName: Full=Ribosome maturation factor rimP
 gi|161164659|emb|CAN95964.1| hypothetical protein sce5801 [Sorangium cellulosum 'So ce 56']
          Length = 208

 Score = 74.3 bits (181), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 84/158 (53%), Gaps = 15/158 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD-----GNMTLRDCEELSQAI 76
           G +   + PV+       V +  + E+    L++ +ER++     G +TL DC ++S+ +
Sbjct: 12  GRVRDAVAPVLASHGVTLVDLEWITERAGWTLRLTIERENADDAGGGVTLEDCADVSRDV 71

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKI 135
           S +LDVE++I  HY LEVSSPG+DR +   ++F R+ G     ++   + D Q+L+ G++
Sbjct: 72  SSVLDVEDLIPNHYNLEVSSPGLDRRLRTAAEFARFLGRTAKVKLARPAPDGQRLLRGEL 131

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   E    +         ++  +IA+ F  +  ARL+
Sbjct: 132 LEAPEGQVAVL--------VDGKRIAVPFADVAEARLV 161


>gi|218665765|ref|YP_002424885.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|259585659|sp|B7J4D2|RIMP_ACIF2 RecName: Full=Ribosome maturation factor rimP
 gi|218517978|gb|ACK78564.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 150

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 9/126 (7%)

Query: 49  KNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           + + LQ+F+E+D+   +T+ DC  +S+ +S  LDVEN I G YRLEVSSPG+DRP+    
Sbjct: 30  RAVALQVFIEKDETTAVTIEDCAAVSRQLSLWLDVENPIHGAYRLEVSSPGLDRPLKNLH 89

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
           DF R+ G      +   +  +++L G+++G  +    L+          E +   + D +
Sbjct: 90  DFERFKGSQAEIHLHGLTQGRRRLQGELLGVEDQKIVLKN--------AEGRWTFALDDI 141

Query: 168 LSARLI 173
             ARL+
Sbjct: 142 HKARLV 147


>gi|198282693|ref|YP_002219014.1| hypothetical protein Lferr_0553 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|259585660|sp|B5EMC8|RIMP_ACIF5 RecName: Full=Ribosome maturation factor rimP
 gi|198247214|gb|ACH82807.1| protein of unknown function DUF150 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 153

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 9/126 (7%)

Query: 49  KNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           + + LQ+F+E+D+   +T+ DC  +S+ +S  LDVEN I G YRLEVSSPG+DRP+    
Sbjct: 33  RAVALQVFIEKDETTAVTIEDCAAVSRQLSLWLDVENPIHGAYRLEVSSPGLDRPLKNLH 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
           DF R+ G      +   +  +++L G+++G  +    L+          E +   + D +
Sbjct: 93  DFERFKGSQAEIHLHGLTQGRRRLQGELLGVEDQKIVLKNA--------EGRWTFALDDI 144

Query: 168 LSARLI 173
             ARL+
Sbjct: 145 HKARLV 150


>gi|39996685|ref|NP_952636.1| hypothetical protein GSU1585 [Geobacter sulfurreducens PCA]
 gi|81702398|sp|Q74CT6|RIMP_GEOSL RecName: Full=Ribosome maturation factor rimP
 gi|39983566|gb|AAR34959.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298505696|gb|ADI84419.1| protein of unknown function DUF150 [Geobacter sulfurreducens KN400]
          Length = 159

 Score = 74.3 bits (181), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 79/126 (62%), Gaps = 7/126 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +AG I++V + V+       V++    E + ++L++FV++  G ++L DC  +S+ +S I
Sbjct: 6   VAGRITAVAEQVLTPQGLELVEVEYKREGRQMVLRLFVDKP-GGISLDDCAAVSRELSEI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE----IVLSSGDKQK-LIGK 134
           LDVE+ I  +Y LEVSSPG++RP+ +++D+ R+ G +V       +    G+++K  +G 
Sbjct: 65  LDVEDFIRENYTLEVSSPGLNRPLKKEADYERYAGRLVKVRTFELLADEEGNRRKTFLGD 124

Query: 135 IMGTSE 140
           ++G S+
Sbjct: 125 LVGLSD 130


>gi|169831085|ref|YP_001717067.1| hypothetical protein Daud_0922 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|226696028|sp|B1I359|RIMP_DESAP RecName: Full=Ribosome maturation factor rimP
 gi|169637929|gb|ACA59435.1| protein of unknown function DUF150 [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 154

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 11/156 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +AG +  + +P+ E      V++  + E     L++F+++  G + L DCE +S+ +   
Sbjct: 6   IAGRVEEMARPLAERKGLELVEVQYVTEGGRRYLRVFLDKP-GGINLDDCEAVSRELDRA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LEVSSPG++RP+ R  D++R+ G +V          ++K  G++MG+ 
Sbjct: 65  LDDVDFIPHSYVLEVSSPGLERPLKRAEDYVRFKGRLVQINTYAPLNGRKKFSGRLMGSG 124

Query: 140 ETGFFLEKEKRGEKDMNELQIA-ISFDSLLSARLIV 174
           E G  +         + E ++A I +D +  ARL V
Sbjct: 125 EEGVTIL--------LGEHELATIPWDQISKARLAV 152


>gi|110833188|ref|YP_692047.1| hypothetical protein ABO_0327 [Alcanivorax borkumensis SK2]
 gi|110646299|emb|CAL15775.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 181

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 69/114 (60%), Gaps = 1/114 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PV+E++ F    +  ++ +  +L++F++  DG +++ DC  +S  +S +LDVE+
Sbjct: 38  LTELLAPVVEDLGFVLWGVEYIQGRGAVLRVFIDHADG-ISVDDCAAVSHEVSGVLDVED 96

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            I G + LEVSSPG+DRPM   + ++ + G  V  +++     K+K+   I+  
Sbjct: 97  PIPGEFNLEVSSPGMDRPMFDITQYVDYIGEDVQLKLLAPVSGKRKMTAAIVAV 150


>gi|163782300|ref|ZP_02177298.1| hypothetical protein HG1285_05920 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882333|gb|EDP75839.1| hypothetical protein HG1285_05920 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 157

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I  +++P+I+ M +R   +    E+  +L++ +++  G +T+RDCEE+S+ IS +LDVE+
Sbjct: 12  IKELVEPLIKGMGYRLFDVEFKPERGWVLRVIIDKP-GGVTIRDCEEVSKKISGLLDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           II   Y LE+SSPG+ R + +   +  + G +V   +      K++  G +    E    
Sbjct: 71  IIPFSYMLEISSPGLTRELEKPEHYDFFKGRLVKVVLREPVSGKREATGYVESVREGIIT 130

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARL 172
           L + ++GE       + I F ++   RL
Sbjct: 131 LREREKGE------ALHIPFSAIAKGRL 152


>gi|85860523|ref|YP_462725.1| hypothetical protein SYN_01790 [Syntrophus aciditrophicus SB]
 gi|123517502|sp|Q2LWU4|RIMP_SYNAS RecName: Full=Ribosome maturation factor rimP
 gi|85723614|gb|ABC78557.1| hypothetical protein SYN_01790 [Syntrophus aciditrophicus SB]
          Length = 160

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 6/102 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  DI  + +PVI       V++  L  K   L++I+++R+ G +TL DC E+S  +  +
Sbjct: 9   LREDIWQLAEPVIASEGLELVEVECLRMKTRWLVRIYMDRE-GGVTLDDCSEISNQLGDV 67

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           LDV ++    Y LEVSSPG+DRP+VR  DF+R+ G    CE+
Sbjct: 68  LDVHDLPPDPYTLEVSSPGLDRPLVRDKDFVRYQG----CEV 105


>gi|118602110|ref|YP_903325.1| hypothetical protein Rmag_0052 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166919103|sp|A1AV97|RIMP_RUTMC RecName: Full=Ribosome maturation factor rimP
 gi|118567049|gb|ABL01854.1| protein of unknown function DUF150 [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 154

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 1/118 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ +I+ VI++M +  V I  +   K+ +L++F++ D   + + DCE++S+ +S I DVE
Sbjct: 8   ITHLIELVIKDMCYELVGIEYVASGKHSILRVFIDTDKKGVGVNDCEKVSRQLSSIFDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             I G Y LEVSSPGI+RP+  K  + R+ G  V   +V     ++   G I   +E 
Sbjct: 68  EPISGQYTLEVSSPGIERPLFHKEHYQRFLGANVKLRMVRPIDGRRNFFGVIGCVNEA 125


>gi|86157526|ref|YP_464311.1| hypothetical protein Adeh_1099 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|123499926|sp|Q2IPZ0|RIMP_ANADE RecName: Full=Ribosome maturation factor rimP
 gi|85774037|gb|ABC80874.1| hypothetical protein Adeh_1099 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 171

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 12/125 (9%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G+  +A  + S+++PV+E   +  V++          L++F+++  G + + DC+ +S+
Sbjct: 4   IGEQSIAEQVRSLLEPVLERDGYELVEVEWARLAGRWTLRVFIDKA-GGVGIDDCQAVSK 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            + PILDV + IE  Y LEVSSPG+DRP+ +  DF R+ G  V            K  G 
Sbjct: 63  TVEPILDVADFIEPAYDLEVSSPGLDRPLRKPRDFDRYAGQRVHV----------KAYGP 112

Query: 135 IMGTS 139
           + GT+
Sbjct: 113 VAGTA 117


>gi|254427945|ref|ZP_05041652.1| conserved hypothetical protein [Alcanivorax sp. DG881]
 gi|196194114|gb|EDX89073.1| conserved hypothetical protein [Alcanivorax sp. DG881]
          Length = 151

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 71/122 (58%), Gaps = 1/122 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PV+E++ F    +  ++ +  +L++F++  DG +++ +C  +S  +S +LDVE+
Sbjct: 8   LTELLAPVVEDLGFVLWGVEYIQGRGAVLRVFIDHADG-ISVDNCAAVSHEVSGVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I G Y LEVSSPG+DRPM   + ++ + G  V  +++     K+K+   I+        
Sbjct: 67  PISGEYNLEVSSPGMDRPMFEIAQYVDYIGEDVQLKLLAPVSGKRKMTAAIVAVDGDTLV 126

Query: 145 LE 146
           +E
Sbjct: 127 VE 128


>gi|259585829|sp|B3PI94|RIMP_CELJU RecName: Full=Ribosome maturation factor rimP
          Length = 164

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 2/123 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +I PV+E +      +  L + +   L+IF++   G ++L DCE +S+ IS +LDVE
Sbjct: 8   LTDLIVPVVESLGCELWGLEYLTQGRYTTLRIFIDGPQG-VSLDDCERVSRQISAVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+G Y LEVSSPG+DRP+  ++ + R+ G  V   + ++   +++  G I    E   
Sbjct: 67  DPIDGEYTLEVSSPGLDRPLYTEAQYARYVGETVNLRLRIAVEGRRRFKGVISAIEEGAL 126

Query: 144 FLE 146
            L+
Sbjct: 127 LLQ 129


>gi|220927906|ref|YP_002504815.1| hypothetical protein Ccel_0453 [Clostridium cellulolyticum H10]
 gi|254803925|sp|B8I6E3|RIMP_CLOCE RecName: Full=Ribosome maturation factor rimP
 gi|219998234|gb|ACL74835.1| protein of unknown function DUF150 [Clostridium cellulolyticum H10]
          Length = 152

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 74/118 (62%), Gaps = 2/118 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ PV+E +++  V I  ++E  N  L++++++  G +++ DC+ +S+ +S +LD +
Sbjct: 9   VTELVSPVVESLNYELVDIEYVKEGANWYLRVYIDKP-GGISIDDCQAVSEQVSDLLDKD 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           + I+  Y LEVSSPG+DRP+  + DF ++ G +V  ++      K+   G+++G  + 
Sbjct: 68  DPIDQSYFLEVSSPGLDRPLKTEKDFAKYKGELVEVKVFQPIDGKKIFEGELVGLKDN 125


>gi|119713530|gb|ABL97583.1| hypothetical protein MBMO_EB0-35D03.0046 [uncultured marine
           bacterium EB0_35D03]
          Length = 153

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 71/122 (58%), Gaps = 2/122 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  + S+I P I ++ +  + +  +   K+ +L+++++ + G + + DCE +S+ +S I
Sbjct: 4   IADKLFSIINPSINDLGYELLGVEYVSSGKHSVLRLYIDSEKG-IGVDDCETVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I G Y LEVSSPGI+RP+ + + + R+ GH V          ++   G I   S
Sbjct: 63  MDVEDPISGQYNLEVSSPGIERPLFKVAHYQRFLGHDVRLRTYRPLDGRRNFTGAIGSVS 122

Query: 140 ET 141
           ET
Sbjct: 123 ET 124


>gi|307825108|ref|ZP_07655329.1| protein of unknown function DUF150 [Methylobacter tundripaludum
           SV96]
 gi|307733856|gb|EFO04712.1| protein of unknown function DUF150 [Methylobacter tundripaludum
           SV96]
          Length = 161

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 5/148 (3%)

Query: 27  SVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++I+P++E + +  V I      K+ LL+I+++ D+G + + DC ++S  IS ++DVE+ 
Sbjct: 10  NLIEPIVEGLGYECVGIEYNPHPKHGLLRIYIDSDNG-ILVEDCTKVSHQISGVMDVEDP 68

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I G+Y LE+SSPG DRP  + S F R+ G  V   +  +   ++K+ G I    +    L
Sbjct: 69  ILGNYHLEISSPGEDRPFFKVSQFERYIGSTVLVHLFKAIDGRRKITGLIEKVEDDIITL 128

Query: 146 EKEKRGEKDMNELQIAISFDSLLSARLI 173
              K GE+      IA+S   L+   LI
Sbjct: 129 ---KDGEQVFEVPFIAMSKARLVPEYLI 153


>gi|259585706|sp|Q0VSS3|RIMP_ALCBS RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 71/122 (58%), Gaps = 1/122 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++ PV+E++ F    +  ++ +  +L++F++  DG +++ DC  +S  +S +LDVE+
Sbjct: 8   LTELLAPVVEDLGFVLWGVEYIQGRGAVLRVFIDHADG-ISVDDCAAVSHEVSGVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I G + LEVSSPG+DRPM   + ++ + G  V  +++     K+K+   I+        
Sbjct: 67  PIPGEFNLEVSSPGMDRPMFDITQYVDYIGEDVQLKLLAPVSGKRKMTAAIVAVDGDTLV 126

Query: 145 LE 146
           +E
Sbjct: 127 VE 128


>gi|258645577|ref|ZP_05733046.1| hypothetical protein GCWU000321_00427 [Dialister invisus DSM 15470]
 gi|260402935|gb|EEW96482.1| hypothetical protein GCWU000321_00427 [Dialister invisus DSM 15470]
          Length = 156

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 63/94 (67%), Gaps = 1/94 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +++P ++++    + +  + E+N +L++F++++DG + L DC+++S+    +LD  ++I 
Sbjct: 13  LLEPALKQLGIELIDVEYVRERNWILRVFIDKEDG-VDLNDCQQISEKAGELLDEADLIS 71

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
            +Y LEVSSPG+DR + +  DFLR+ G  V  ++
Sbjct: 72  ANYMLEVSSPGLDRVLKKDKDFLRYAGEEVDVKL 105


>gi|302872116|ref|YP_003840752.1| hypothetical protein COB47_1477 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574975|gb|ADL42766.1| protein of unknown function DUF150 [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 151

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELSDK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ K+ G+++  +
Sbjct: 63  LDIADPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGRVVDVFLKQPFLNRTKITGELVEKN 122

Query: 140 ETGFFL--EKEKRG--EKDMNELQIAISF 164
           E    L  +KEK     +++ ++++AI F
Sbjct: 123 EKSLVLIVDKEKIDIPVENVKKVKLAIRF 151


>gi|220916333|ref|YP_002491637.1| protein of unknown function DUF150 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|259585694|sp|B8JFY3|RIMP_ANAD2 RecName: Full=Ribosome maturation factor rimP
 gi|219954187|gb|ACL64571.1| protein of unknown function DUF150 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 171

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 12/125 (9%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G+  +A  +  +++PV+E   +  V++          L++F+++  G + + DC+ +S+
Sbjct: 4   IGEQSIAEQVRRLLEPVLERDGYELVEVEWARLAGRWTLRVFIDKA-GGVGIDDCQAVSK 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            + PILDV ++IE  Y LEVSSPG+DRP+ +  DF R+ G  V            K  G 
Sbjct: 63  TVEPILDVADVIEPAYDLEVSSPGLDRPLRKPGDFDRYAGQRVHV----------KAYGP 112

Query: 135 IMGTS 139
           + GT+
Sbjct: 113 VAGTA 117


>gi|210622609|ref|ZP_03293269.1| hypothetical protein CLOHIR_01217 [Clostridium hiranonis DSM 13275]
 gi|210154110|gb|EEA85116.1| hypothetical protein CLOHIR_01217 [Clostridium hiranonis DSM 13275]
          Length = 154

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 84/146 (57%), Gaps = 7/146 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++  + +E  + +V +  ++E     L++ V+++ G ++L +CEE+S+ +SP LD  
Sbjct: 10  VEKMVTAITDEKGYETVDVEYVKEAGQFYLRVVVDKE-GGISLNECEEVSRELSPKLDEN 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + IE +Y LEVSSPGIDR + R  +F+++ G  V  ++  +    ++  G+++G  E   
Sbjct: 69  DFIEENYYLEVSSPGIDRALKRDKEFVKYKGRDVEIKLYKAIDGVKQFEGELVGLDEENN 128

Query: 144 FL-----EKEKRGEKDMNELQIAISF 164
            +     E+ K   KD+  +++AI F
Sbjct: 129 IVVIINNEEMKFNRKDVAIIRLAIKF 154


>gi|188586066|ref|YP_001917611.1| protein of unknown function DUF150 [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|226734162|sp|B2A393|RIMP_NATTJ RecName: Full=Ribosome maturation factor rimP
 gi|179350753|gb|ACB85023.1| protein of unknown function DUF150 [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 154

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 9/151 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I ++I+P + ++ +  V + L +E +  +L+++++   G + L DCE +S ++  +LD  
Sbjct: 10  IENIIEPAVRDLGYDLVDVELIMENQKWVLRVYIDHGKG-IGLDDCELVSNSLDQLLDEH 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG +RP+ +K DF+ + G  V  +  +    ++   GK++G  +   
Sbjct: 69  DPIPHSYVLEVSSPGAERPLKKKKDFVNFAGKKVQIKTYVKLDGRKNFKGKLLGLEDEHV 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE    GE       + I  D +  A L++
Sbjct: 129 VLETFNSGE-------VKIPLDKIAKANLLL 152


>gi|192362188|ref|YP_001980957.1| BCR family protein [Cellvibrio japonicus Ueda107]
 gi|190688353|gb|ACE86031.1| Uncharacterized BCR, YhbC family [Cellvibrio japonicus Ueda107]
          Length = 196

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 2/123 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +I PV+E +      +  L + +   L+IF++   G ++L DCE +S+ IS +LDVE
Sbjct: 40  LTDLIVPVVESLGCELWGLEYLTQGRYTTLRIFIDGPQG-VSLDDCERVSRQISAVLDVE 98

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+G Y LEVSSPG+DRP+  ++ + R+ G  V   + ++   +++  G I    E   
Sbjct: 99  DPIDGEYTLEVSSPGLDRPLYTEAQYARYVGETVNLRLRIAVEGRRRFKGVISAIEEGAL 158

Query: 144 FLE 146
            L+
Sbjct: 159 LLQ 161


>gi|312143667|ref|YP_003995113.1| protein of unknown function DUF150 [Halanaerobium sp.
           'sapolanicus']
 gi|311904318|gb|ADQ14759.1| protein of unknown function DUF150 [Halanaerobium sp.
           'sapolanicus']
          Length = 156

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 71/117 (60%), Gaps = 2/117 (1%)

Query: 19  MGLAGD-ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAI 76
           +G   D ++  + P+    +   V +  L+E  + +L++F+E  +G +T+ +CE +S+A+
Sbjct: 4   LGKVADLVTEFVLPIAHNENLNLVDVEFLKEGSDWILRVFLENKEGELTIEECERVSRAL 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           S ILD E+ I+  Y LEVSSPG++RP+  + DF R+ G +++ +       +++ IG
Sbjct: 64  SVILDEEDPIDKSYILEVSSPGLERPLKTEEDFERFQGELISVKTFKKIDGQKEFIG 120


>gi|326204062|ref|ZP_08193923.1| protein of unknown function DUF150 [Clostridium papyrosolvens DSM
           2782]
 gi|325985829|gb|EGD46664.1| protein of unknown function DUF150 [Clostridium papyrosolvens DSM
           2782]
          Length = 152

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 72/114 (63%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ PV+E +++  V +  ++E  N  L++++++  G +++ DC+ +S+ +S +LD  
Sbjct: 9   VTELVSPVVENLNYELVDVEYVKEGANWYLRVYIDKP-GGISIDDCQAVSEQVSELLDKN 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + I+  Y LEVSSPG+DRP+  + DF ++ G +V  ++      K+   G+++G
Sbjct: 68  DPIDQSYYLEVSSPGLDRPLKTEKDFTKYKGELVEVKVFQPIDGKKIFEGELVG 121


>gi|260771175|ref|ZP_05880102.1| UPF0090 domain-containing protein [Vibrio furnissii CIP 102972]
 gi|260613772|gb|EEX38964.1| UPF0090 domain-containing protein [Vibrio furnissii CIP 102972]
 gi|315179219|gb|ADT86133.1| hypothetical protein vfu_A00938 [Vibrio furnissii NCTC 11218]
          Length = 151

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+I+++ ++G +T+ DC E+S  +S +LDVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIYIDHENG-ITVDDCAEVSHQVSAVLDVEDPITVAYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGT 138
            GH V+  + ++ G+++K  G+I+G 
Sbjct: 96  KGHEVSIVLKMAVGNRRKWKGEILGA 121


>gi|118579396|ref|YP_900646.1| hypothetical protein Ppro_0960 [Pelobacter propionicus DSM 2379]
 gi|259586175|sp|A1AML8|RIMP_PELPD RecName: Full=Ribosome maturation factor rimP
 gi|118502106|gb|ABK98588.1| protein of unknown function DUF150 [Pelobacter propionicus DSM
           2379]
          Length = 161

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I ++  PVI+ M+   V++      +  +L++F++++ G +TL DC +LS+ +S +LDVE
Sbjct: 12  IRTLALPVIDSMNLELVEVEYKRSGREAVLRLFIDKE-GGVTLDDCADLSRELSTLLDVE 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           ++I   Y LEVSSPG+DRP+  ++D+ R++G ++
Sbjct: 71  DLIPCEYSLEVSSPGLDRPLKSEADYERFSGRLI 104


>gi|195953995|ref|YP_002122285.1| protein of unknown function DUF150 [Hydrogenobaculum sp. Y04AAS1]
 gi|226736378|sp|B4U6H1|RIMP_HYDS0 RecName: Full=Ribosome maturation factor rimP
 gi|195933607|gb|ACG58307.1| protein of unknown function DUF150 [Hydrogenobaculum sp. Y04AAS1]
          Length = 154

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +A  +  +++P+ + + FR   +    E   +L+I ++++ G +T+ DCEELS+ +S +L
Sbjct: 7   IATTVKDLVKPISDNLGFRLFDVEFKPENGWVLRIIIDKE-GGVTIDDCEELSKRVSALL 65

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE++I   Y LEVSSPG+ R +  K  +  + G      +     +KQ+  G I    +
Sbjct: 66  DVEDVITSSYFLEVSSPGLTRELKEKWHYEFFKGKYARLYLKEKIDNKQEYAGYIDSVED 125

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               L         + +  + I FD +  ARL V
Sbjct: 126 DTLVLR--------LLDKTLKIPFDKIAKARLDV 151


>gi|312127898|ref|YP_003992772.1| hypothetical protein Calhy_1688 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777917|gb|ADQ07403.1| protein of unknown function DUF150 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 151

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSYFLRVYIDKP-GGITIDDCQLVSEELSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ K+ G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFVRNRGRVVDVFLNQPFLNRTKITGELVEKN 122

Query: 140 ETGFFL--EKEKRG--EKDMNELQIAISF 164
           E    L  +KEK     +++ ++++AI F
Sbjct: 123 EKSLVLIVDKEKIDIPVENIKKVKLAIRF 151


>gi|217967592|ref|YP_002353098.1| protein of unknown function DUF150 [Dictyoglomus turgidum DSM 6724]
 gi|259585754|sp|B8E2Y4|RIMP_DICTD RecName: Full=Ribosome maturation factor rimP
 gi|217336691|gb|ACK42484.1| protein of unknown function DUF150 [Dictyoglomus turgidum DSM 6724]
          Length = 156

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  +++P+ E+ S+  V +    E +  +L++++++  G +T+ DC  +S+ IS
Sbjct: 7   MELLKKLKDIVEPICEKYSYELVDLEYRREPHGWVLRVYIDKV-GGVTVEDCAYISEKIS 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+++ I   Y LEVSSPG+DRP+ RK DF R  G  V   ++     K+K+ GKI  
Sbjct: 66  KELDIKDPIPHSYILEVSSPGLDRPLKRKRDFERHIGEKVNITLLEEIEGKKKVEGKIFK 125

Query: 138 TSETGFFLE 146
             E    L+
Sbjct: 126 VDEKNVTLK 134


>gi|90416133|ref|ZP_01224065.1| hypothetical protein GB2207_10663 [marine gamma proteobacterium
           HTCC2207]
 gi|90331858|gb|EAS47072.1| hypothetical protein GB2207_10663 [marine gamma proteobacterium
           HTCC2207]
          Length = 151

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 70/115 (60%), Gaps = 2/115 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++QPV+E +      + L    K  LL+I+++R+DG + + DCE +S+    +LDVE
Sbjct: 8   LKALLQPVVEALDCELWGLELQSGGKRKLLRIYIDREDG-IGVEDCERVSRQSGSVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++I G Y LEVSSPG+DRP+   + + R+ G  V+  +  +   ++   G+++G 
Sbjct: 67  DVISGEYILEVSSPGMDRPLYELAQYERYIGEDVSLRLRFAYDGRRNFKGRLVGV 121


>gi|260893512|ref|YP_003239609.1| protein of unknown function DUF150 [Ammonifex degensii KC4]
 gi|260865653|gb|ACX52759.1| protein of unknown function DUF150 [Ammonifex degensii KC4]
          Length = 161

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 2/127 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S + +P+ E +    V +   +E    +L++F+++  G +TL DCE LS+A+   LDVE
Sbjct: 11  VSRLAEPLAERLGLELVDVEYKKEGGRWVLRVFIDKPSG-VTLDDCEALSEALGEALDVE 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG++RP+ + + F R+ G  V    +     +++  G ++   E G 
Sbjct: 70  DPIPHSYSLEVSSPGVERPLKKPAHFQRFVGREVRVSTLAPVEGQRRFTGVLLAADEEGI 129

Query: 144 FLEKEKR 150
            LE + +
Sbjct: 130 RLETDGK 136


>gi|257468348|ref|ZP_05632442.1| putative cytoplasmic protein [Fusobacterium ulcerans ATCC 49185]
 gi|317062621|ref|ZP_07927106.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688297|gb|EFS25132.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
          Length = 159

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 10/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I +++ PV+ EM    V I  L++     ++I+VE  +G++TL DC  +S  I    D++
Sbjct: 13  IETIVTPVVNEMELSLVDIEYLQDGGYWYVRIYVENPEGDITLEDCAAISNKIDE--DID 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +IE  + LEVSSPGI+RP+ +  D++R+ G      +     D +   G I    ++  
Sbjct: 71  KLIEQRFFLEVSSPGIERPLKKIEDYIRFKGEKAKLSLKHKVDDNKNFEGIITDCKDSII 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +LE E       +E  + I F  +  A L+
Sbjct: 131 YLELE-------DEKVMEIPFSEVRKANLV 153


>gi|289548940|ref|YP_003473928.1| hypothetical protein Thal_1169 [Thermocrinis albus DSM 14484]
 gi|289182557|gb|ADC89801.1| protein of unknown function DUF150 [Thermocrinis albus DSM 14484]
          Length = 157

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 81/140 (57%), Gaps = 7/140 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++ P++++M +R   +    E+  +L+I ++++ G +T+ DCEE+S+ +S +LDVE+
Sbjct: 12  VKELVTPLVKKMGYRLFDVEFKPERGWVLRIILDKE-GGITIGDCEEVSRKVSALLDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           II   Y LEVSSPG++R + +   F  + G +V   +      ++++ G I G +E    
Sbjct: 71  IIPFSYMLEVSSPGLNRELTKPEHFEFFEGRLVRVILRQPVEGRREIKGYIRGVTEGVLK 130

Query: 145 LEKEKRGEKD-MNELQIAIS 163
           LE     EKD  N L + +S
Sbjct: 131 LE-----EKDSRNILHVPLS 145


>gi|94501386|ref|ZP_01307906.1| hypothetical protein RED65_04750 [Oceanobacter sp. RED65]
 gi|94426499|gb|EAT11487.1| hypothetical protein RED65_04750 [Oceanobacter sp. RED65]
          Length = 175

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++QPV+E M +    +  + + K+ LL+IF++ ++G + + DC  +S+ +S ++DVE+ I
Sbjct: 30  LLQPVVEAMGYEFWGLEYIAKGKDSLLRIFIDGENG-VNVDDCAAVSRQVSGVMDVEDPI 88

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              Y LEVSSPG+DRP+     F R+ G  V  ++  +   ++K  GK++G  +
Sbjct: 89  TSEYNLEVSSPGLDRPLFTLEHFERYVGEFVDIKLRYAFEGRRKFKGKLVGIED 142


>gi|311695960|gb|ADP98833.1| protein belonging to uncharacterized protein family UPF0090 [marine
           bacterium HP15]
          Length = 153

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 68/115 (59%), Gaps = 1/115 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++QPV+E + +    I    +  + LL++F++  +  + + DCE++S+ IS ++DVE
Sbjct: 8   LEDILQPVVEGLGYEFWGIEFRSQGHHSLLRVFIDDAENGIGVDDCEKVSRQISGVMDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           + I+  Y LEVSSPG+DRP+ R   +  + GH V   + ++   ++K  G I G 
Sbjct: 68  DPIQTEYTLEVSSPGMDRPLFRLEQYEAFVGHQVQIRLRMAFEGRRKFQGLIKGV 122


>gi|302392349|ref|YP_003828169.1| hypothetical protein Acear_1598 [Acetohalobium arabaticum DSM 5501]
 gi|302204426|gb|ADL13104.1| protein of unknown function DUF150 [Acetohalobium arabaticum DSM
           5501]
          Length = 153

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 71/117 (60%), Gaps = 2/117 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  I  + +P++E+     V     +E ++  +++FV++ +G +TL DC+++S+ IS  
Sbjct: 5   IADYIFDLARPIVEDHGLELVDTEYQKEGQDWTVRVFVDKPEG-VTLDDCQKISREISDR 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           LD+E+ IE  Y LEVSSPG+DRP+  + DF R+ GH++          ++   G+++
Sbjct: 64  LDIEDPIEKSYILEVSSPGLDRPLKDEEDFKRFTGHLIDVSTYAPVNGEKSFTGELL 120


>gi|149185834|ref|ZP_01864149.1| hypothetical protein ED21_23911 [Erythrobacter sp. SD-21]
 gi|148830395|gb|EDL48831.1| hypothetical protein ED21_23911 [Erythrobacter sp. SD-21]
          Length = 185

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 19/176 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK----NLLLQIFVERD-DGNMTLRDCEELSQAISPI 79
           ++ VI+P  + + F  V++ ++  +     + LQI  E    G + +  C  LS+ +S +
Sbjct: 7   LTEVIEPEAQALGFELVRVKMVPSEAGDGGMALQIMAEDPATGQLVIEQCAALSRRVSDM 66

Query: 80  LDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           LD      E ++ G Y LEVSSPGIDRP+ R  DF  W GH     +       + + G+
Sbjct: 67  LDQLEEQGEVLVPGAYHLEVSSPGIDRPLTRAKDFENWAGHEAKIALTEKVHGYRTVKGE 126

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNYGS 188
           + G    G  +  +  G K     +++   + + SA+L++TDEL+ A+  L+  G+
Sbjct: 127 LKGID--GDMVTVDIPGAK-----EVSFPRNLIHSAKLVLTDELIAATQPLDTSGA 175


>gi|312793235|ref|YP_004026158.1| hypothetical protein Calkr_1037 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876953|ref|ZP_07736928.1| protein of unknown function DUF150 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796268|gb|EFR12622.1| protein of unknown function DUF150 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312180375|gb|ADQ40545.1| protein of unknown function DUF150 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 151

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 88/149 (59%), Gaps = 6/149 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E+  F  V I   +E ++  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILEKYGFDLVDIEFKKEGRSYFLRVYIDKP-GGITIDDCQLVSEELSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ K+ G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNRGRVVDVFLNQPFLNRTKITGELVEKN 122

Query: 140 ETGFFL--EKEKRG--EKDMNELQIAISF 164
           E    L  +KEK     +++ ++++AI F
Sbjct: 123 EKSLVLIVDKEKIDIPVENIKKVKLAIRF 151


>gi|153004005|ref|YP_001378330.1| hypothetical protein Anae109_1138 [Anaeromyxobacter sp. Fw109-5]
 gi|259585695|sp|A7H9F0|RIMP_ANADF RecName: Full=Ribosome maturation factor rimP
 gi|152027578|gb|ABS25346.1| protein of unknown function DUF150 [Anaeromyxobacter sp. Fw109-5]
          Length = 171

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 2/89 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           V++PV+    +  V++  L +     L++FV++  G + + DC+ +S+ + PILDVE+ I
Sbjct: 16  VLEPVLARDGYELVEVEWLRQGSRWTLRLFVDKP-GGVGIEDCQAVSRLVDPILDVEDFI 74

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           E  Y LEVSSPG+DRP+ + +DF R+ G 
Sbjct: 75  EPAYDLEVSSPGLDRPLRKPADFDRYAGQ 103


>gi|152995056|ref|YP_001339891.1| hypothetical protein Mmwyl1_1025 [Marinomonas sp. MWYL1]
 gi|189038545|sp|A6VU27|RIMP_MARMS RecName: Full=Ribosome maturation factor rimP
 gi|150835980|gb|ABR69956.1| protein of unknown function DUF150 [Marinomonas sp. MWYL1]
          Length = 153

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 70/115 (60%), Gaps = 2/115 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           +  +I+PV+E + F    +  L   K+ +L+I++E D +  + + DC  +S+ +S ILDV
Sbjct: 8   LEELIRPVVEGLGFEFWGMEYLSLGKDSVLRIYIETDAEKGIDVEDCARVSRQVSSILDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           E+ I G Y LEVSSPG+DRP+   + +  + G +V+  + +    ++K  G++MG
Sbjct: 68  EDPITGEYNLEVSSPGLDRPLFSLAQYQAYIGSIVSLRLRVPFDGRRKFKGQLMG 122


>gi|56478753|ref|YP_160342.1| hypothetical protein ebA5838 [Aromatoleum aromaticum EbN1]
 gi|81356614|sp|Q5NZS3|RIMP_AZOSE RecName: Full=Ribosome maturation factor rimP
 gi|56314796|emb|CAI09441.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 142

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 12/150 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++ V+  + F  V       K  L+++F++ + G +T+ DC  +S  ++ + +VE
Sbjct: 2   DVEGLVEQVVSGLGFELVDFET-SPKGRLMRVFIDIERG-VTVDDCATVSNQLTRVFEVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ + +DF R+ G  V   + +  G+++  IG + G SE   
Sbjct: 60  NV--DYDRLEVSSPGLDRPLKKTADFERFAGDEVQVRLRMPIGNQRNFIGVLEGLSEGVV 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            L  +K          +A  FD +  ARL+
Sbjct: 118 RLHTDKG--------DVAFPFDEIEKARLV 139


>gi|326791501|ref|YP_004309322.1| hypothetical protein Clole_2418 [Clostridium lentocellum DSM 5427]
 gi|326542265|gb|ADZ84124.1| protein of unknown function DUF150 [Clostridium lentocellum DSM
           5427]
          Length = 153

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 86/145 (59%), Gaps = 6/145 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   + P++ E+ +  V +  ++E  N  L+I+++++ G +T++DC+  S+AI  +LD +
Sbjct: 10  IEGYLDPILAELHYELVDVEYVKEGPNYYLRIYIDKE-GGITIQDCQLTSRAIEKVLDEK 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+  Y LEVSSPG+DR + +  +F R+ G +V  ++  +   ++   G+++  +E   
Sbjct: 69  DPIKDPYVLEVSSPGLDRVLKKDKEFERFKGRLVDVKLYEAINKQKHFTGELIKKTEDKL 128

Query: 144 FLEKEKRG----EKDMNELQIAISF 164
           +++ E        K++  +++AI+F
Sbjct: 129 YIDDEGTNLEFEMKNVAVVRLAITF 153


>gi|114331634|ref|YP_747856.1| hypothetical protein Neut_1648 [Nitrosomonas eutropha C91]
 gi|114308648|gb|ABI59891.1| protein of unknown function DUF150 [Nitrosomonas eutropha C91]
          Length = 160

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 11  YEPRIFGDMGLAGDISSV---IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
           +E  + G   + G+  S+   ++P I  M +  V I        LL++FV++ DG +TL 
Sbjct: 3   FEGGLVGPFFICGEAMSLFELLEPTIAGMGYELVDIEQ-SAPGRLLRVFVDKKDGAITLA 61

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DC  +S  +  +L VENI   + RLEVSSPG+DRP+ +++DF+R+ G  +   + ++   
Sbjct: 62  DCVAVSNHLGQLLAVENI--DYNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQG 119

Query: 128 KQKLIGKIMGTSETGFFL 145
           ++  +G +    +    L
Sbjct: 120 QRNFVGTLTEVGDDALML 137


>gi|158320556|ref|YP_001513063.1| hypothetical protein Clos_1524 [Alkaliphilus oremlandii OhILAs]
 gi|259585693|sp|A8MHI0|RIMP_ALKOO RecName: Full=Ribosome maturation factor rimP
 gi|158140755|gb|ABW19067.1| protein of unknown function DUF150 [Alkaliphilus oremlandii OhILAs]
          Length = 154

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 72/115 (62%), Gaps = 2/115 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P+I+  +F  V +   +E  N  L+I++++  G +TL DC+++S+ +   LD E+ I
Sbjct: 13  LVMPIIQNENFELVDLEYKKEGSNWYLRIYIDKP-GGITLDDCQKVSEQLGEELDREDPI 71

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +Y LEVSSPG+DRP+ + SDF+R+ G +V  ++  +    + + G+++G  E 
Sbjct: 72  SENYFLEVSSPGLDRPLKKDSDFIRFAGEIVEVKLYEALNGNKVIEGELVGLEEN 126


>gi|320354997|ref|YP_004196336.1| hypothetical protein Despr_2912 [Desulfobulbus propionicus DSM
           2032]
 gi|320123499|gb|ADW19045.1| protein of unknown function DUF150 [Desulfobulbus propionicus DSM
           2032]
          Length = 153

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 72/114 (63%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I    +P++ +M    V++    E +  +L+ F++++ G +T+ DC ++S+ IS  L+VE
Sbjct: 12  IQGFAEPLLADMGMELVEVQFRREGHGWVLRFFIDKE-GGITIDDCADVSREISAYLEVE 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           ++I+  Y LEVSSPG++RP+ +K DF R+   ++  ++    G+++ L G ++G
Sbjct: 71  DLIDHAYHLEVSSPGLERPLRKKEDFHRFIDRLIRVKLREPLGEQKVLTGTLLG 124


>gi|220931625|ref|YP_002508533.1| hypothetical protein Hore_07810 [Halothermothrix orenii H 168]
 gi|259585780|sp|B8CW69|RIMP_HALOH RecName: Full=Ribosome maturation factor rimP
 gi|219992935|gb|ACL69538.1| uncharacterized protein conserved in bacteria [Halothermothrix
           orenii H 168]
          Length = 159

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 8/158 (5%)

Query: 19  MGLAGD-ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAI 76
           MG   D +  + QP++E      V +  ++E +N +L++F+E  +G +TL  CE +S+ +
Sbjct: 1   MGKITDRVEDLAQPIVESQGLELVDVEYVKEGENRVLRVFIENPEGEVTLDHCENVSKNL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              LD  + I+  Y LEVSSPGI+RP+ +K DF R++G +   +        +++ G I 
Sbjct: 61  DEKLDEVDPIQESYILEVSSPGIERPLKKKEDFDRFSGKLAYIKTFAPVSGNKEITGIIK 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G       + K+       ++ ++ I F  +  A L+V
Sbjct: 121 GRDGDNIKVLKKD------DDKELEIPFSQIAKAHLMV 152


>gi|197117687|ref|YP_002138114.1| hypothetical protein Gbem_1299 [Geobacter bemidjiensis Bem]
 gi|226695910|sp|B5EI54|RIMP_GEOBB RecName: Full=Ribosome maturation factor rimP
 gi|197087047|gb|ACH38318.1| protein of unknown function DUF150 [Geobacter bemidjiensis Bem]
          Length = 160

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 67/99 (67%), Gaps = 5/99 (5%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E +++++++F+E+ +G + L DC ++S+ +S ILDVE+ +   Y LEVSSPGI RP+ + 
Sbjct: 33  EGRDMVVRVFLEKREGGINLDDCADVSRQLSDILDVEDFMPERYTLEVSSPGICRPLKKV 92

Query: 107 SDFLRWNGHVVACE----IVLSSGDKQK-LIGKIMGTSE 140
           +D+ R+ GH++  +    +   +G+K+K   GK+ G ++
Sbjct: 93  ADYERFLGHLIKVKTFEMLADEAGNKRKTFTGKLTGIAD 131


>gi|67459265|ref|YP_246889.1| hypothetical protein RF_0873 [Rickettsia felis URRWXCal2]
 gi|75536303|sp|Q4UL49|RIMP_RICFE RecName: Full=Ribosome maturation factor rimP
 gi|67004798|gb|AAY61724.1| Uncharacterized protein [Rickettsia felis URRWXCal2]
          Length = 161

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 89/160 (55%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVE 83
           I++VI+  + +M F  V +        +++I ++  +G  +++ DC + S+ IS ILDVE
Sbjct: 8   ITNVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNGEKISVEDCTKASRTISAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEV+S G++RP+V+  ++ R+ G  V  ++      K +  GKI+       
Sbjct: 68  DLIEDAYSLEVASSGLERPLVKFENYNRFLGREVKIKLKELLNGKTRYQGKIIKAKNNKI 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E        E ++ I +D + +A L++T+E+ +  L
Sbjct: 128 YLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLL 159


>gi|53804602|ref|YP_113779.1| hypothetical protein MCA1317 [Methylococcus capsulatus str. Bath]
 gi|81682218|sp|Q609B8|RIMP_METCA RecName: Full=Ribosome maturation factor rimP
 gi|53758363|gb|AAU92654.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 150

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 10/155 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   +  +I+PV+  + +    I   + +  +L+++++   G + L DC ++S  +S 
Sbjct: 1   MRMPEHLQRLIEPVVTGLGYELAGIEF-DARARVLRVYIDHPQG-IGLDDCSKVSYQLSG 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y+LE+SSPG+DRP+     F R+ G  V  + + S   +++  G+I G 
Sbjct: 59  MLDVEDPIPGQYQLEISSPGLDRPLFTLEHFKRFTGRRVRLQTLRSLDGQRRFKGEIAGV 118

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 LE       D N L  AI FD +  ARLI
Sbjct: 119 RGDVIDLE-------DDNGLH-AIPFDLIDKARLI 145


>gi|332992816|gb|AEF02871.1| hypothetical protein ambt_06680 [Alteromonas sp. SN2]
          Length = 152

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 70/115 (60%), Gaps = 2/115 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ P +E + F  V I  +   K+ +L++F++ ++G +++ +C ++S  +S ILDVE
Sbjct: 8   LTEMLNPGVEALGFELVGIEFVRAGKHSILRVFIDHENG-ISVDNCADVSHQVSAILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           + I   Y LEVSSPG+DRP+ ++  ++   G VV   + +   D++   GK++  
Sbjct: 67  DPISTEYNLEVSSPGMDRPLFKEKHYVDSVGEVVQVRLSMPMDDRRNFKGKVLAC 121


>gi|259585805|sp|Q0AFJ1|RIMP_NITEC RecName: Full=Ribosome maturation factor rimP
          Length = 143

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 3/118 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +++P I  M +  V I        LL++FV++ DG +TL DC  +S  +  +L VENI  
Sbjct: 6   LLEPTIAGMGYELVDIEQ-SAPGRLLRVFVDKKDGAITLADCVAVSNHLGQLLAVENI-- 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
            + RLEVSSPG+DRP+ +++DF+R+ G  +   + ++   ++  +G +    +    L
Sbjct: 63  DYNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQGQRNFVGTLTEVGDDALML 120


>gi|253701582|ref|YP_003022771.1| hypothetical protein GM21_2984 [Geobacter sp. M21]
 gi|259585778|sp|C6E2Q3|RIMP_GEOSM RecName: Full=Ribosome maturation factor rimP
 gi|251776432|gb|ACT19013.1| protein of unknown function DUF150 [Geobacter sp. M21]
          Length = 160

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 66/99 (66%), Gaps = 5/99 (5%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E +++++++F+E+ +G + L DC E+S+ +S ILDVE+ +   Y LEVSSPGI RP+ + 
Sbjct: 33  EGRDMVVRVFLEKREGGINLDDCAEVSRQLSDILDVEDFMPERYTLEVSSPGICRPLKKV 92

Query: 107 SDFLRWNGHVVACE----IVLSSGDKQK-LIGKIMGTSE 140
            D+ R+ GH++  +    +   +G+K+K   GK+ G ++
Sbjct: 93  VDYERFMGHLIKVKTFEMLPDEAGNKRKTFTGKLTGIAD 131


>gi|290969146|ref|ZP_06560671.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780652|gb|EFD93255.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
          Length = 153

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 66/112 (58%), Gaps = 1/112 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++   + ++   S   V +  + EK+  L++F++++ G + L DC+++S+ +S +LD E+
Sbjct: 13  VTEKAEQLLASTSLELVDVEYVREKDWYLRVFIDKE-GGVDLEDCQQVSEKLSKVLDRED 71

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            I  +Y LEVSSPG+DR + +  DFLR+ G  V          K+  +G+++
Sbjct: 72  PIRDNYLLEVSSPGLDRILKKDKDFLRYAGRTVDIHFFAPREGKKDWVGELV 123


>gi|30248763|ref|NP_840833.1| hypothetical protein NE0759 [Nitrosomonas europaea ATCC 19718]
 gi|34222818|sp|Q82WD1|RIMP_NITEU RecName: Full=Ribosome maturation factor rimP
 gi|30180358|emb|CAD84670.1| DUF150 [Nitrosomonas europaea ATCC 19718]
          Length = 143

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 67/109 (61%), Gaps = 3/109 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +++P I  M +  V I        LL++F+++ +G++TL DC  +S  +S +L VENI  
Sbjct: 6   LLEPTIAGMGYELVDIEQ-SAPGRLLRVFIDKKEGSITLDDCVAISNHLSQLLAVENI-- 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            + RLEVSSPG+DRP+ +K+DF+R+ G      + ++   ++  +G ++
Sbjct: 63  DYNRLEVSSPGLDRPLKKKADFVRYMGESARIRLRIALQGQRNFVGTLV 111


>gi|229031447|ref|ZP_04187447.1| hypothetical protein bcere0028_35010 [Bacillus cereus AH1271]
 gi|228729736|gb|EEL80716.1| hypothetical protein bcere0028_35010 [Bacillus cereus AH1271]
          Length = 164

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 90/166 (54%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I IS D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKKE-------IQISMDKVANARLAVT 163


>gi|256821529|ref|YP_003145492.1| hypothetical protein Kkor_0303 [Kangiella koreensis DSM 16069]
 gi|256795068|gb|ACV25724.1| protein of unknown function DUF150 [Kangiella koreensis DSM 16069]
          Length = 150

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 70/118 (59%), Gaps = 2/118 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M    ++  +I+P +E   F    +  L + K+ +L++F++ ++G +++ +C E+S  +S
Sbjct: 1   MARNAELEKIIRPAVEAAGFEFWGLEHLAQGKHSVLRVFIDHENG-ISVDNCAEVSHQVS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            +LDVE+ I+G Y LE+SSPG+DRP+  +  F R+ G     ++ +    ++K  G I
Sbjct: 60  GVLDVEDPIKGLYNLEISSPGMDRPLFNEQQFARYVGEDAEVKLSVPLNGRRKFKGTI 117


>gi|302381339|ref|YP_003817162.1| hypothetical protein Bresu_0224 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191967|gb|ADK99538.1| protein of unknown function DUF150 [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 232

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 8/159 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER-DDGNMTLRDCEELSQAISPILD 81
           +I  +I PV + +    V++ L+       LQ+  ER  D ++ + +C  LS+A+S +LD
Sbjct: 45  EILELIDPVADSIGLSIVRVRLMGGTLRRRLQVMAERPSDNDIDVGECARLSRAMSEVLD 104

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I G Y LEVSSPGIDRP+ R  DF  + G     E       +++  G + GT   
Sbjct: 105 AADPIAGEYLLEVSSPGIDRPLTRLKDFDLFEGLEARLESDRMIEGRKRFKGILAGTDGD 164

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
              ++ +  GE D       I FD L+ A+L++ D LL+
Sbjct: 165 NIAIDLD--GEDDT----ALIPFDWLVDAKLVMNDALLK 197


>gi|296132884|ref|YP_003640131.1| protein of unknown function DUF150 [Thermincola sp. JR]
 gi|296031462|gb|ADG82230.1| protein of unknown function DUF150 [Thermincola potens JR]
          Length = 153

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 67/114 (58%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +  P++E      V +  ++E  +  L++F+++  G ++L DC+ ++Q + P+LD +
Sbjct: 10  VTELAVPIVENAGMELVDVEYVKEGAHWYLRVFIDKPQG-VSLDDCQMIAQRLDPLLDEK 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + I   Y LEVSSPG+DRP+ + +DF R+ G  V          K++ IG++ G
Sbjct: 69  DPIPHEYMLEVSSPGLDRPLKKPADFARYAGRKVKVSTYAPIDGKKEFIGELKG 122


>gi|262042728|ref|ZP_06015882.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039953|gb|EEW41070.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 140

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 62/103 (60%), Gaps = 1/103 (0%)

Query: 33  IEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRL 92
           +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+ I   Y L
Sbjct: 6   VEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVEDPITVAYNL 64

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           EVSSPG+DRPM     + R+ G  VA  + ++  +++KL G I
Sbjct: 65  EVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKLQGII 107


>gi|108761060|ref|YP_630294.1| hypothetical protein MXAN_2065 [Myxococcus xanthus DK 1622]
 gi|122389560|sp|Q1DAM9|RIMP_MYXXD RecName: Full=Ribosome maturation factor rimP
 gi|108464940|gb|ABF90125.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 161

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 8/146 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++++P++       V +  L E+   +L++F+++  G + L +C ++S+A+ P LDVE+ 
Sbjct: 16  ALLEPIVAGEGLELVDLEFLREREGWVLRLFIDKPGGRVGLDECTQVSRAVDPSLDVEDF 75

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIMGTSETGF 143
           I   Y LEVSSPG+DRP+ + + F R  G  V  +     G+  ++   G +   +  G 
Sbjct: 76  IPHEYNLEVSSPGVDRPLRKPTHFERVKGQQVKVKTFGPVGEPPRKNFTGTLTEVAGDGI 135

Query: 144 FLEKEKRGE-----KDMNELQIAISF 164
            +E E  G      KD+ +  +   F
Sbjct: 136 SVEVEGAGTFHILFKDIAKANLEFQF 161


>gi|51473735|ref|YP_067492.1| hypothetical protein RT0541 [Rickettsia typhi str. Wilmington]
 gi|81390042|sp|Q68WI2|RIMP_RICTY RecName: Full=Ribosome maturation factor rimP
 gi|51460047|gb|AAU04010.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
          Length = 161

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVE 83
           I+++I+  + +M F  V +        +++I ++  +GN +++ DC  +S+ IS ILDVE
Sbjct: 8   ITNIIEESLTDMGFELVLVKFKGVNTKVVEILIDSLNGNKISIEDCTNVSRTISAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEVSS GI+R +V+  ++ R+ G  V  ++      K    GKI+       
Sbjct: 68  DLIEDAYSLEVSSSGIERKLVKFENYNRFLGREVKVKLKALLNGKTLYQGKIIKAENNKI 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+          E ++ I F+ + +A L++T+E+ +  L
Sbjct: 128 YLK--------CAEQEVLIDFNLIKNANLVLTEEVFKKLL 159


>gi|153855239|ref|ZP_01996405.1| hypothetical protein DORLON_02419 [Dorea longicatena DSM 13814]
 gi|149752238|gb|EDM62169.1| hypothetical protein DORLON_02419 [Dorea longicatena DSM 13814]
          Length = 150

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 2/136 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P++EE  F  V +  ++E  N  L+ ++++  G + + DCE +S+ +S ILD ++ I
Sbjct: 9   ILLPIVEEYGFELVDVEYVKEGSNWYLRAYIDKP-GGIGVNDCEVVSRRLSDILDEKDYI 67

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           E  Y LEVSSPG+ RP+ ++ DF R  G  V          K++  G +    ET   +E
Sbjct: 68  EDSYILEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRMIDRKKEFTGILKDYDETTVTIE 127

Query: 147 KEKRGEKDMNELQIAI 162
            E   EK   + +IA+
Sbjct: 128 MEDETEKTFEKSEIAL 143


>gi|90022355|ref|YP_528182.1| hypothetical protein Sde_2710 [Saccharophagus degradans 2-40]
 gi|123395825|sp|Q21H59|RIMP_SACD2 RecName: Full=Ribosome maturation factor rimP
 gi|89951955|gb|ABD81970.1| protein of unknown function DUF150 [Saccharophagus degradans 2-40]
          Length = 151

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 2/117 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV+E +      + L ++ K  LL+IF+E++ G + + DCE +S+ +S +LDVE
Sbjct: 8   LEKMLAPVVESLGCEFWGLELRMQGKQSLLRIFIEKEAG-VGVEDCENVSRQVSAVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           + I G Y LEVSSPG+DRP+     F R+ G  V+  +  +   ++   GK+    +
Sbjct: 67  DPISGEYTLEVSSPGMDRPLFTLDHFTRFVGEHVSLRLRTAFDGRRNFSGKLTAVED 123


>gi|77919152|ref|YP_356967.1| hypothetical protein Pcar_1552 [Pelobacter carbinolicus DSM 2380]
 gi|91208010|sp|Q3A4B0|RIMP_PELCD RecName: Full=Ribosome maturation factor rimP
 gi|77545235|gb|ABA88797.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 162

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 84/155 (54%), Gaps = 13/155 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I S++ PV+EE     V +    E +  +L++++++  G +TL  C E+S+ +  +L+VE
Sbjct: 10  IRSLVLPVLEEKGRELVDVEYRREGQGWILRLYIDQP-GGVTLDACAEVSREVGVLLEVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV------VACEIVLSSGDKQKLIGKIMG 137
           + I+  Y LEVSSPG+DRP+ +  D+ R+ G +      V+ ++      ++  +G + G
Sbjct: 69  DPIDTAYNLEVSSPGLDRPLTKLEDYERFAGRLAKVKSRVSIDVDGKGRGRKTFVGVLAG 128

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            SE    LE      KD N  ++ I F+ +  A L
Sbjct: 129 LSEGKVVLEL-----KDKNGFRMEIPFEDIEKANL 158


>gi|83589894|ref|YP_429903.1| hypothetical protein Moth_1046 [Moorella thermoacetica ATCC 39073]
 gi|91207996|sp|Q2RJM9|RIMP_MOOTA RecName: Full=Ribosome maturation factor rimP
 gi|83572808|gb|ABC19360.1| Protein of unknown function DUF150 [Moorella thermoacetica ATCC
           39073]
          Length = 158

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 83/150 (55%), Gaps = 9/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  +++P++  M +  V +    E    +L++F++R +G + L DCE++S+ +S +LD +
Sbjct: 8   IQELVEPLLTPMGYELVDLQYGREGGRYILRLFIDRPEG-IGLDDCEQVSRVVSALLDEK 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG++RP+ +++DF R+ G  V          ++   G+++G  +   
Sbjct: 67  DPIPHSYYLEVSSPGLERPLKKEADFNRFAGRKVKLRTFAPINGQRHFQGRLLGYQDGQV 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +  E+  +       +AI  + + +ARL+
Sbjct: 127 RMHLEEGWD-------LAIPLEQVATARLV 149


>gi|228954093|ref|ZP_04116122.1| hypothetical protein bthur0006_34650 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229191986|ref|ZP_04318956.1| hypothetical protein bcere0002_36430 [Bacillus cereus ATCC 10876]
 gi|228591537|gb|EEK49386.1| hypothetical protein bcere0002_36430 [Bacillus cereus ATCC 10876]
 gi|228805659|gb|EEM52249.1| hypothetical protein bthur0006_34650 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 174

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 90/166 (54%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 16  RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 74

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 75  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 134

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I IS D + +ARL VT
Sbjct: 135 GKLLSYDGTTITLLLTIKTRKKE-------IQISMDKVANARLAVT 173


>gi|323705404|ref|ZP_08116979.1| protein of unknown function DUF150 [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535306|gb|EGB25082.1| protein of unknown function DUF150 [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 151

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P IE+  F  V +   +E  N  L++++++D G ++L DC+ +S+ +S  LD  + I
Sbjct: 11  LVTPAIEKNKFELVDVEYKKEGNNWYLRVYIDKD-GGVSLDDCQIISEYLSEKLDEVDPI 69

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  Y LEVSSPGIDRP+  K DF ++ G +V   +      K+K  G+++G
Sbjct: 70  DNSYILEVSSPGIDRPLKTKRDFEKFKGSLVEVSLYQPIDKKKKYEGELLG 120


>gi|312622704|ref|YP_004024317.1| hypothetical protein Calkro_1646 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203171|gb|ADQ46498.1| protein of unknown function DUF150 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 151

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ ++ G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGKVVDVFLNQPFLNRTRITGELVEKN 122

Query: 140 ETGFFL--EKEK--RGEKDMNELQIAISF 164
           E    L  +KEK     +++ ++++AI F
Sbjct: 123 EKSLILIVDKEKIVIPVENIKKVKLAIRF 151


>gi|254490571|ref|ZP_05103757.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
 gi|224464315|gb|EEF80578.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
          Length = 148

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   +  +I+  IE + +  V +  ++   + +L+I+++ + G + + DCE++S  IS
Sbjct: 1   MAITDQVEQLIEAPIESLGYELVGVEYIQGGPDAILRIYIDAEQG-IGIEDCEKVSHQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE  I   Y LEVSSPG DRP+ +  DF R+ G  V   + L    ++   G + G
Sbjct: 60  GVLDVEEPIRSAYMLEVSSPGFDRPLFKARDFERFAGAEVKISMKLPVQGRRNFTGVLQG 119

Query: 138 TSETGFFLE 146
            S+    +E
Sbjct: 120 FSDGEVLIE 128


>gi|147677600|ref|YP_001211815.1| hypothetical protein PTH_1265 [Pelotomaculum thermopropionicum SI]
 gi|259586176|sp|A5D2U8|RIMP_PELTS RecName: Full=Ribosome maturation factor rimP
 gi|146273697|dbj|BAF59446.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 153

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  V  PV++E     V +   +E     L+IF+++  G + + DC+ +S+ I  +LD  
Sbjct: 10  VKRVTLPVVQEAGLELVDVEYAKEGGRYYLRIFIDKP-GGVRIEDCQHVSEKIDRLLDEL 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPGIDRP+ +  D++R+ G +   +       ++K  G+I+G      
Sbjct: 69  DPIPQSYFLEVSSPGIDRPLKKAGDYIRFAGRLARVKTFSPVEGRRKFTGRIVGMHGEDV 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++ E +        +++I F  + SARL V
Sbjct: 129 VMQVEGK--------EMSIPFKQIASARLEV 151


>gi|228922571|ref|ZP_04085871.1| hypothetical protein bthur0011_35560 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228960033|ref|ZP_04121697.1| hypothetical protein bthur0005_35040 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229047503|ref|ZP_04193093.1| hypothetical protein bcere0027_34860 [Bacillus cereus AH676]
 gi|229071315|ref|ZP_04204538.1| hypothetical protein bcere0025_34880 [Bacillus cereus F65185]
 gi|229081072|ref|ZP_04213582.1| hypothetical protein bcere0023_37110 [Bacillus cereus Rock4-2]
 gi|229111288|ref|ZP_04240841.1| hypothetical protein bcere0018_35340 [Bacillus cereus Rock1-15]
 gi|229129093|ref|ZP_04258066.1| hypothetical protein bcere0015_35380 [Bacillus cereus BDRD-Cer4]
 gi|229146388|ref|ZP_04274759.1| hypothetical protein bcere0012_35310 [Bacillus cereus BDRD-ST24]
 gi|229152016|ref|ZP_04280211.1| hypothetical protein bcere0011_35560 [Bacillus cereus m1550]
 gi|229180093|ref|ZP_04307437.1| hypothetical protein bcere0005_34390 [Bacillus cereus 172560W]
 gi|228603302|gb|EEK60779.1| hypothetical protein bcere0005_34390 [Bacillus cereus 172560W]
 gi|228631365|gb|EEK87999.1| hypothetical protein bcere0011_35560 [Bacillus cereus m1550]
 gi|228637021|gb|EEK93480.1| hypothetical protein bcere0012_35310 [Bacillus cereus BDRD-ST24]
 gi|228654330|gb|EEL10195.1| hypothetical protein bcere0015_35380 [Bacillus cereus BDRD-Cer4]
 gi|228672064|gb|EEL27355.1| hypothetical protein bcere0018_35340 [Bacillus cereus Rock1-15]
 gi|228702116|gb|EEL54592.1| hypothetical protein bcere0023_37110 [Bacillus cereus Rock4-2]
 gi|228711769|gb|EEL63721.1| hypothetical protein bcere0025_34880 [Bacillus cereus F65185]
 gi|228723750|gb|EEL75105.1| hypothetical protein bcere0027_34860 [Bacillus cereus AH676]
 gi|228799549|gb|EEM46502.1| hypothetical protein bthur0005_35040 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228837000|gb|EEM82341.1| hypothetical protein bthur0011_35560 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 164

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 90/166 (54%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I IS D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKKE-------IQISMDKVANARLAVT 163


>gi|330722349|gb|EGH00206.1| NusA [gamma proteobacterium IMCC2047]
          Length = 150

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 75/125 (60%), Gaps = 8/125 (6%)

Query: 18  DMGLAGDISSVIQPVIE--EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           DMGL    + +++PV+E  E+ F  +++ +++ +   L++++E D G + + DCE +S+ 
Sbjct: 4   DMGL----TELVRPVVEGLELEFWGLEM-VVQGREKTLRVYIESDKG-IAVEDCEAVSRQ 57

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S + DVE+ I G Y LEVSSPG+DRP+   + F ++ G  V  ++  +   ++   G +
Sbjct: 58  LSSLFDVEDPIAGEYTLEVSSPGLDRPLFEAAQFAQYVGETVKIKLRSAFEGRRNFRGAL 117

Query: 136 MGTSE 140
            G  +
Sbjct: 118 SGVED 122


>gi|284108774|ref|ZP_06386439.1| protein of unknown function DUF150 [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829848|gb|EFC34139.1| protein of unknown function DUF150 [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 157

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 83/154 (53%), Gaps = 4/154 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   +  + +P+ + +    +++    +    ++++ VE++ G + ++DCE+  Q++  
Sbjct: 3   GLGSLVQGIAEPIAKALRLEIIEVECHGQGAKTIVRVIVEKE-GGVGIQDCEQFHQSLGR 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDV + +   YRL+VSSPG+DRP+ R+ D+ +  G  +  ++      K  ++G++   
Sbjct: 62  ALDVADPVAHAYRLDVSSPGLDRPLKRRKDYDQAVGRTIRVKVHAPVQGKGTVVGQLAEV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            + G  L+   R  K     ++A+ +D++  A+L
Sbjct: 122 DDQGITLQVPVR--KSRTPRRVALEWDAIAHAKL 153


>gi|322418687|ref|YP_004197910.1| hypothetical protein GM18_1160 [Geobacter sp. M18]
 gi|320125074|gb|ADW12634.1| protein of unknown function DUF150 [Geobacter sp. M18]
          Length = 159

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 66/96 (68%), Gaps = 6/96 (6%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E +++++++F+E++ G +TL DC ++S+ +S ILDVE+ +   Y LEVSSPGI RP+ + 
Sbjct: 33  EGRDMVVRVFLEKE-GGITLDDCADVSRQLSDILDVEDFMPERYTLEVSSPGICRPLKKV 91

Query: 107 SDFLRWNGHVVACE----IVLSSGDKQK-LIGKIMG 137
           +D+ R+ GH+V  +    +   +G+K+K   GK+ G
Sbjct: 92  ADYERFMGHLVKVKTFDTLTDDAGNKRKTFTGKLAG 127


>gi|229086369|ref|ZP_04218546.1| hypothetical protein bcere0022_29560 [Bacillus cereus Rock3-44]
 gi|228696981|gb|EEL49789.1| hypothetical protein bcere0022_29560 [Bacillus cereus Rock3-44]
          Length = 164

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E K+  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I I  D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 163


>gi|188589052|ref|YP_001920614.1| hypothetical protein CLH_1220 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|226696282|sp|B2V4G5|RIMP_CLOBA RecName: Full=Ribosome maturation factor rimP
 gi|188499333|gb|ACD52469.1| conserved hypothetical protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 153

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 2/124 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++P++EE+S+    +  ++E     L+I++++++ +++L DCE++S+ +S I
Sbjct: 6   LLEKVEVLVKPIVEELSYELYYLEYVKENGEYYLRIYIDKEEDSISLNDCEKVSRRVSEI 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ IE  Y LEVSSPG++R + ++  F ++ G  V      S    +K+ G I+  +
Sbjct: 66  LDVEDPIEDSYYLEVSSPGLNRGLYKEEHFKKFIGREVLVRFNGSLEGMKKIQG-ILKEA 124

Query: 140 ETGF 143
           E  F
Sbjct: 125 ENEF 128


>gi|187933637|ref|YP_001885467.1| hypothetical protein CLL_A1269 [Clostridium botulinum B str. Eklund
           17B]
 gi|226695891|sp|B2TJ51|RIMP_CLOBB RecName: Full=Ribosome maturation factor rimP
 gi|187721790|gb|ACD23011.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 153

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 65/94 (69%), Gaps = 1/94 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++P++EE+S+    +  ++E     L+I++++++ +++L DCE++S+ +S ILDVE
Sbjct: 10  VEVLVKPIVEELSYELYYLEYVKENGEYYLRIYIDKEEDSISLNDCEKVSRRVSEILDVE 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + IE  Y LEVSSPG++R + ++  F ++ G  V
Sbjct: 70  DPIEDSYYLEVSSPGLNRGLYKEEHFKKFIGREV 103


>gi|222529040|ref|YP_002572922.1| hypothetical protein Athe_1048 [Caldicellulosiruptor bescii DSM
           6725]
 gi|254799910|sp|B9MR45|RIMP_ANATD RecName: Full=Ribosome maturation factor rimP
 gi|222455887|gb|ACM60149.1| protein of unknown function DUF150 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 151

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ ++ G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGKVVDVFLNQPFLNRTRITGELVEKN 122

Query: 140 ETGFFL--EKEK--RGEKDMNELQIAISF 164
           E    L  +KEK     +++ ++++AI F
Sbjct: 123 EKSLILIVDKEKIVIPIENIKKVKLAIRF 151


>gi|78485465|ref|YP_391390.1| hypothetical protein Tcr_1121 [Thiomicrospira crunogena XCL-2]
 gi|91207998|sp|Q31GK7|RIMP_THICR RecName: Full=Ribosome maturation factor rimP
 gi|78363751|gb|ABB41716.1| conserved hypothetical protein with DUF150 domain [Thiomicrospira
           crunogena XCL-2]
          Length = 151

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 1/129 (0%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I ++++P IE M F+      L   K+  L+I++++D+  +T+ DC ++S+ +S
Sbjct: 1   MTLEDKIENLLRPTIETMGFQFWGCEYLPAGKHSTLRIYIDKDEVGVTVDDCGKVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            I+DVE+ I   Y LEVSSPG+DRP+     +  + G  V          +++  G +  
Sbjct: 61  AIMDVEDPISNAYMLEVSSPGMDRPLFHPEQYKAYEGQEVQVRTSSPVMGRKRFKGVMSQ 120

Query: 138 TSETGFFLE 146
            SE+   +E
Sbjct: 121 VSESDIAVE 129


>gi|292572171|gb|ADE30086.1| hypothetical protein rpr22_CDS533 [Rickettsia prowazekii Rp22]
          Length = 161

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 90/164 (54%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +A  I+++I+  + +M F  V +        ++++ ++  +GN +++ DC  +S+ IS I
Sbjct: 4   IAQQITNIIEESLTDMGFELVLVKFKGVSPKVVEVLIDSLNGNKISIEDCTNVSRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS GI+R +V+  ++ R+ G  V  ++      K    GKI+   
Sbjct: 64  LDVEDLIEEAYSLEVSSSGIERTLVKFENYNRFLGREVKIKLKELLNGKTLYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +L+          E +++I F+ + +A L++T+E+ +  L
Sbjct: 124 NNKIYLK--------CAEQEVSIDFNLIRNANLVLTEEVFKKLL 159


>gi|205354192|ref|YP_002227993.1| hypothetical protein SG3179 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|259586192|sp|B5REN8|RIMP_SALG2 RecName: Full=Ribosome maturation factor rimP
 gi|205273973|emb|CAR38978.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326629313|gb|EGE35656.1| Ribosome maturation factor rimP [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 154

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 12  LTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 71  PISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 121


>gi|150390439|ref|YP_001320488.1| hypothetical protein Amet_2677 [Alkaliphilus metalliredigens QYMF]
 gi|259585692|sp|A6TRL1|RIMP_ALKMQ RecName: Full=Ribosome maturation factor rimP
 gi|149950301|gb|ABR48829.1| protein of unknown function DUF150 [Alkaliphilus metalliredigens
           QYMF]
          Length = 152

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 83/137 (60%), Gaps = 2/137 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I P++E   F  V I   +E  +  L++++++  G +TL DC+++S+ +S  LD  + I
Sbjct: 11  LITPIVEAEQFELVDIEFKKEGPHKYLRVYIDKP-GGITLDDCQKVSEGLSKKLDEADPI 69

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
             +Y LEVSSPG+DRP+ R+ DFL++ G ++  ++  +   ++ + G+++G  +    ++
Sbjct: 70  VENYFLEVSSPGLDRPLKREVDFLKFKGEMIELKLYEAIDGQKTIEGELVGLIDDKIVIK 129

Query: 147 KEKRGEKDMNELQIAIS 163
             +  E +M   ++AI+
Sbjct: 130 ISETEEVEMPREKVAIT 146


>gi|303229567|ref|ZP_07316355.1| conserved hypothetical protein [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303232094|ref|ZP_07318797.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302513200|gb|EFL55239.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302515692|gb|EFL57646.1| conserved hypothetical protein [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 152

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 70/117 (59%), Gaps = 1/117 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +SSV++ VI   +   V +  + E++  L++++++  G + L DC+ +S+ +S  LD ++
Sbjct: 10  VSSVVEGVIAGTNLELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQMVSEKLSAALDEKD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            I  +Y LEVSSPG+DR + +  DF+R+NG  V  ++       ++  G + G ++T
Sbjct: 69  PIAENYLLEVSSPGLDRVLKKDKDFIRYNGRDVDIQLFKPINGSKQYTGVLQGFTDT 125


>gi|154485018|ref|ZP_02027466.1| hypothetical protein EUBVEN_02736 [Eubacterium ventriosum ATCC
           27560]
 gi|149733971|gb|EDM50090.1| hypothetical protein EUBVEN_02736 [Eubacterium ventriosum ATCC
           27560]
          Length = 147

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 78/137 (56%), Gaps = 2/137 (1%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++I P+++E  F  V +  ++E  N  L+ +V+++ G +T+ D E +S+ +S  LD E+ 
Sbjct: 5   ALITPIVDEKGFELVDVEYVKEGSNWYLRAYVDKE-GGITINDLESVSRILSDKLDEEDF 63

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I   Y LEVSSPG+ RP+ +  DF R  G+ +   +  +   +++L+G +   +     +
Sbjct: 64  ISDAYILEVSSPGLGRPLKKDKDFDRNMGNEIEVHLYRAVDRQKQLVGLLKAYNADTITI 123

Query: 146 EKEKRGEKDMNELQIAI 162
           E E   E D++ + +++
Sbjct: 124 ENEDGSETDIDRVNVSL 140


>gi|304316866|ref|YP_003852011.1| hypothetical protein Tthe_1413 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778368|gb|ADL68927.1| protein of unknown function DUF150 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 151

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 81/137 (59%), Gaps = 3/137 (2%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           +++ P IE+ +F  V +   +E  N  L+++++++ G ++L DC+ +S+ +S  LD  + 
Sbjct: 10  NLVAPAIEKNNFELVDVEYKKEGNNWYLRVYIDKE-GGVSLDDCQIISEYLSEKLDEVDP 68

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETGFF 144
           IE  Y LEVSSPGIDRP+  + DF ++ G +V   +      K+K  G+++G  ++    
Sbjct: 69  IENSYILEVSSPGIDRPLKTQRDFDKFKGSLVEVSLYQPIDKKKKYEGELVGLINDKVVI 128

Query: 145 LEKEKRGEKDMNELQIA 161
            +  +R E D+N++ + 
Sbjct: 129 TDNGERKEFDINDISLV 145


>gi|54040273|sp|P67219|RIMP_SALTI RecName: Full=Ribosome maturation factor rimP
 gi|54042668|sp|P67218|RIMP_SALTY RecName: Full=Ribosome maturation factor rimP
 gi|91208382|sp|Q57JH7|RIMP_SALCH RecName: Full=Ribosome maturation factor rimP
 gi|91208383|sp|Q5PLA8|RIMP_SALPA RecName: Full=Ribosome maturation factor rimP
 gi|259586212|sp|A9N734|RIMP_SALPB RecName: Full=Ribosome maturation factor rimP
 gi|259586213|sp|C0PZ56|RIMP_SALPC RecName: Full=Ribosome maturation factor rimP
 gi|259586214|sp|B5BGJ7|RIMP_SALPK RecName: Full=Ribosome maturation factor rimP
 gi|259586216|sp|B5QZW0|RIMP_SALEP RecName: Full=Ribosome maturation factor rimP
 gi|259586218|sp|A9MP34|RIMP_SALAR RecName: Full=Ribosome maturation factor rimP
 gi|323131648|gb|ADX19078.1| Ribosome maturation factor rimP [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 152

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 119


>gi|194445687|ref|YP_002042545.1| hypothetical protein SNSL254_A3546 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|195873562|ref|ZP_02697406.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197248900|ref|YP_002148214.1| hypothetical protein SeAg_B3477 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264321|ref|ZP_03164395.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197301026|ref|ZP_02663047.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204928262|ref|ZP_03219462.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205357196|ref|ZP_02345817.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205357561|ref|ZP_02571247.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205359197|ref|ZP_02668054.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205360600|ref|ZP_02684674.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|259586187|sp|B5F6U0|RIMP_SALA4 RecName: Full=Ribosome maturation factor rimP
 gi|259586193|sp|B4TJ08|RIMP_SALHS RecName: Full=Ribosome maturation factor rimP
 gi|259586194|sp|B4T700|RIMP_SALNS RecName: Full=Ribosome maturation factor rimP
 gi|62129432|gb|AAX67135.1| Hypothetical protein yhbC [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194404350|gb|ACF64572.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194409325|gb|ACF69544.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|195633168|gb|EDX51582.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197212603|gb|ACH50000.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242576|gb|EDY25196.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197289178|gb|EDY28547.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204322584|gb|EDZ07781.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323251|gb|EDZ11090.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205331278|gb|EDZ18042.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205337765|gb|EDZ24529.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205348549|gb|EDZ35180.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 154

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 12  LTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 71  PISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 121


>gi|146297078|ref|YP_001180849.1| hypothetical protein Csac_2073 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|226701152|sp|A4XL73|RIMP_CALS8 RecName: Full=Ribosome maturation factor rimP
 gi|145410654|gb|ABP67658.1| protein of unknown function DUF150 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 151

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 70/117 (59%), Gaps = 2/117 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++P++E+  F  V I   +E K   L++++++  G +T+ DC+ +S+ +S  LD+ 
Sbjct: 8   VEELVKPILEKYGFDLVDIEFKKEGKKHFLRVYIDKP-GGITIDDCQLVSEELSNKLDIV 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     +  KL G+++  +E
Sbjct: 67  DPIPFSYYLEVSSPGVDRPLVNDRDFIRNKGRVVDVFLKQPIMNTTKLTGELVEKNE 123


>gi|15605802|ref|NP_213179.1| hypothetical protein aq_260 [Aquifex aeolicus VF5]
 gi|6647906|sp|O66619|RIMP_AQUAE RecName: Full=Ribosome maturation factor rimP
 gi|2982974|gb|AAC06588.1| hypothetical protein aq_260 [Aquifex aeolicus VF5]
          Length = 158

 Score = 70.9 bits (172), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 20/155 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++PVI  M F+   +    E +  +L+I  +++ G +T++DCEE+S+ +S +LDVE
Sbjct: 12  VKEIVEPVIRGMGFKLFDVEFKPEGRGWVLRIIADKE-GGITIKDCEEISRKVSALLDVE 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK--IMGTSET 141
           +II   Y LE++SPG+ RP+ +   +  + G +V            KLI K  I G  E 
Sbjct: 71  DIIPFSYLLEITSPGLTRPLTKVEHYDFFKGRLV------------KLILKEPIEGKREV 118

Query: 142 GFFLEKEKRGEKDMNELQ----IAISFDSLLSARL 172
             ++E  K G  D+ E +    + I F ++   RL
Sbjct: 119 VGYIEDVKNGIIDIREKEKGKVLHIPFSAIAKGRL 153


>gi|229168556|ref|ZP_04296279.1| hypothetical protein bcere0007_35130 [Bacillus cereus AH621]
 gi|228614962|gb|EEK72064.1| hypothetical protein bcere0007_35130 [Bacillus cereus AH621]
          Length = 164

 Score = 70.9 bits (172), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VEIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMFE 124

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I I  D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 163


>gi|161353583|ref|NP_462201.2| hypothetical protein STM3288 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161486781|ref|NP_806884.2| hypothetical protein t3206 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|161501916|ref|NP_457670.2| hypothetical protein STY3469 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|161936211|ref|YP_152295.2| hypothetical protein SPA3156 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|162139540|ref|YP_218216.2| hypothetical protein SC3229 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194470097|ref|ZP_03076081.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194735644|ref|YP_002116238.1| hypothetical protein SeSA_A3478 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|198245424|ref|YP_002217261.1| hypothetical protein SeD_A3645 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387280|ref|ZP_03213892.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205358508|ref|ZP_02656955.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205359739|ref|ZP_02831643.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|213052983|ref|ZP_03345861.1| hypothetical protein Salmoneentericaenterica_08732 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213425431|ref|ZP_03358181.1| hypothetical protein SentesTyphi_07043 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213581726|ref|ZP_03363552.1| hypothetical protein SentesTyph_11179 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213621933|ref|ZP_03374716.1| hypothetical protein SentesTyp_32176 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213645860|ref|ZP_03375913.1| hypothetical protein SentesTy_00020 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|228879515|ref|YP_001573258.2| hypothetical protein SARI_04336 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|229307088|ref|YP_001590259.2| hypothetical protein SPAB_04100 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|229597265|ref|YP_002047317.2| hypothetical protein SeHA_C3583 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|259586191|sp|B5FI15|RIMP_SALDC RecName: Full=Ribosome maturation factor rimP
 gi|259586195|sp|B4TWE0|RIMP_SALSV RecName: Full=Ribosome maturation factor rimP
 gi|194456461|gb|EDX45300.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711146|gb|ACF90367.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197939940|gb|ACH77273.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604378|gb|EDZ02923.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205333894|gb|EDZ20658.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205343499|gb|EDZ30263.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|267995485|gb|ACY90370.1| hypothetical protein STM14_3971 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|320087735|emb|CBY97499.1| UPF0090 protein yhbC [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|322716286|gb|EFZ07857.1| transcription elongation factor NusA [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|326625039|gb|EGE31384.1| phage shock protein A [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 150

 Score = 70.9 bits (172), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 8   LTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 67  PISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 117


>gi|115372720|ref|ZP_01460026.1| YlxS [Stigmatella aurantiaca DW4/3-1]
 gi|115370201|gb|EAU69130.1| YlxS [Stigmatella aurantiaca DW4/3-1]
          Length = 249

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++++P++       + +  + E+   +L++F+++  G + L +C ++S+A+ P LDVE++
Sbjct: 104 TLLEPIVAGEGLELIDLEFVREREGWVLRLFIDKPGGRVGLDECSQVSRAVDPALDVEDL 163

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIMGTSETGF 143
           +   Y LEVSSPG++RP+ + S + R  G  V  +     GD  ++   G +   +  G 
Sbjct: 164 VPNEYNLEVSSPGVNRPLKKLSHYERVKGQKVKVKTFGPIGDPPRKNFSGTLTEVTAEGI 223

Query: 144 FLEKEKRGE-----KDMNELQIAISF 164
            +E E  G      KD+ +  +   F
Sbjct: 224 AVEVEGAGAFRIPLKDIAKANLEFEF 249


>gi|196247597|ref|ZP_03146299.1| protein of unknown function DUF150 [Geobacillus sp. G11MC16]
 gi|259585816|sp|A4IMD3|RIMP_GEOTN RecName: Full=Ribosome maturation factor rimP
 gi|196212381|gb|EDY07138.1| protein of unknown function DUF150 [Geobacillus sp. G11MC16]
          Length = 157

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 8/152 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++ EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  LD  
Sbjct: 9   VEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGVVSEKLSEKLDEV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG-HVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + I  +Y LEVSSPG +RP+  + DF++  G HV        +G+KQ   G++     T 
Sbjct: 68  DPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYEPIAGEKQ-FEGELTAFDGTT 126

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L  + RG +      +AI ++ + SARL V
Sbjct: 127 VTLSVKDRGRQKT----VAIPYEKVASARLAV 154


>gi|126698904|ref|YP_001087801.1| hypothetical protein CD1306 [Clostridium difficile 630]
 gi|254974852|ref|ZP_05271324.1| hypothetical protein CdifQC_06040 [Clostridium difficile QCD-66c26]
 gi|255092239|ref|ZP_05321717.1| hypothetical protein CdifC_06222 [Clostridium difficile CIP 107932]
 gi|255100325|ref|ZP_05329302.1| hypothetical protein CdifQCD-6_05917 [Clostridium difficile
           QCD-63q42]
 gi|255306263|ref|ZP_05350435.1| hypothetical protein CdifA_06705 [Clostridium difficile ATCC 43255]
 gi|255313979|ref|ZP_05355562.1| hypothetical protein CdifQCD-7_06500 [Clostridium difficile
           QCD-76w55]
 gi|255516659|ref|ZP_05384335.1| hypothetical protein CdifQCD-_06064 [Clostridium difficile
           QCD-97b34]
 gi|255649758|ref|ZP_05396660.1| hypothetical protein CdifQCD_06184 [Clostridium difficile
           QCD-37x79]
 gi|260682914|ref|YP_003214199.1| hypothetical protein CD196_1169 [Clostridium difficile CD196]
 gi|260686512|ref|YP_003217645.1| hypothetical protein CDR20291_1147 [Clostridium difficile R20291]
 gi|306519863|ref|ZP_07406210.1| hypothetical protein CdifQ_07217 [Clostridium difficile QCD-32g58]
 gi|123363595|sp|Q18BH3|RIMP_CLOD6 RecName: Full=Ribosome maturation factor rimP
 gi|115250341|emb|CAJ68163.1| conserved hypothetical protein [Clostridium difficile]
 gi|260209077|emb|CBA62221.1| conserved hypothetical protein [Clostridium difficile CD196]
 gi|260212528|emb|CBE03478.1| conserved hypothetical protein [Clostridium difficile R20291]
          Length = 153

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 74/122 (60%), Gaps = 2/122 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   I  ++  + +E  F  V +  ++E     L++++++++G ++L +CE +S+ +SP
Sbjct: 4   NLEATIEEIVTKITDEHGFEMVDVEYVKEAGEYYLRVYIDKEEG-ISLNECELVSRELSP 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD ++ I+ +Y LEVSSPG+DR + +  DF+R+ G  V  ++       ++  G+++G 
Sbjct: 63  ILDEKDPIKENYFLEVSSPGLDRALKKDRDFVRYQGRDVDLKLYKPLNGCKQFEGELVGL 122

Query: 139 SE 140
           +E
Sbjct: 123 TE 124


>gi|268686951|ref|ZP_06153813.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268627235|gb|EEZ59635.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 149

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 5/119 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           +G + DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S 
Sbjct: 3   IGSSMDIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSR 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  VE+I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G
Sbjct: 60  VFMVEDI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEG 116


>gi|269103409|ref|ZP_06156106.1| UPF0090 domain-containing protein [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163307|gb|EEZ41803.1| UPF0090 domain-containing protein [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 151

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 75/120 (62%), Gaps = 2/120 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +++P +  + +  V +  +   ++  L+IF+++++G + + DC E+S+ +S 
Sbjct: 3   ALETQLTEMLEPSVAALGYELVGLEFIRAGEHSTLRIFIDKENG-INVEDCAEVSRQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I+  
Sbjct: 62  VMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSLVLKMAMGNRRKWKGDIVAV 121


>gi|194099045|ref|YP_002002126.1| hypothetical protein NGK_1501 [Neisseria gonorrhoeae NCCP11945]
 gi|193934335|gb|ACF30159.1| UPF0090 protein [Neisseria gonorrhoeae NCCP11945]
          Length = 205

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 5/119 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           +G + DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S 
Sbjct: 59  IGSSMDIQTILEKTLPGLGYELVDFELAAQGTL--RVFIDKE-GGITVEDCATVSNHLSR 115

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  VE+I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G
Sbjct: 116 VFMVEDI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEG 172


>gi|149375757|ref|ZP_01893525.1| hypothetical protein MDG893_04092 [Marinobacter algicola DG893]
 gi|149359882|gb|EDM48338.1| hypothetical protein MDG893_04092 [Marinobacter algicola DG893]
          Length = 153

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 68/114 (59%), Gaps = 1/114 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++P++E + +    I    +  + LL+IF++  +  + + DCE++S+  S ++DVE
Sbjct: 8   LEELLRPIVEGLGYEFWGIEFRSQGHHSLLRIFIDDAENGIGIEDCEKVSRQASGVMDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + I+  Y LEVSSPG+DRP+ R   +  + GH V  ++ ++   ++K  G I G
Sbjct: 68  DPIQTEYTLEVSSPGMDRPLFRLEQYEAFAGHQVQIKLRMAFEGRRKFQGLIKG 121


>gi|317051741|ref|YP_004112857.1| hypothetical protein Selin_1571 [Desulfurispirillum indicum S5]
 gi|316946825|gb|ADU66301.1| protein of unknown function DUF150 [Desulfurispirillum indicum S5]
          Length = 155

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 81/131 (61%), Gaps = 9/131 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S ++QP+++E++     + L+     +L+++++++ G ++L +CE +S  +  +LDVE+
Sbjct: 10  VSELLQPIVQELALELFDVELINASGWILRVYLDKE-GGVSLDECERVSIELGTLLDVED 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV---ACEIVLSSGDKQKL-IGKIMGTSE 140
           II   Y LEVSSPG++R +  ++DF ++ G +      E++L++    KL IG +   S+
Sbjct: 69  IIGFRYTLEVSSPGVNRKLRHRADFEKYLGRLARIRTSEVLLNT----KLHIGYLADISD 124

Query: 141 TGFFLEKEKRG 151
           T   + ++ RG
Sbjct: 125 TELTIREKDRG 135


>gi|255655318|ref|ZP_05400727.1| hypothetical protein CdifQCD-2_06375 [Clostridium difficile
           QCD-23m63]
 gi|296451303|ref|ZP_06893043.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP08]
 gi|296880345|ref|ZP_06904308.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP07]
 gi|296259909|gb|EFH06764.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP08]
 gi|296428586|gb|EFH14470.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP07]
          Length = 153

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 74/122 (60%), Gaps = 2/122 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   I  ++  + +E  F  V +  ++E     L++++++++G ++L +CE +S+ +SP
Sbjct: 4   NLEATIEEIVTKITDEHGFEMVDVEYVKEAGEYYLRVYIDKEEG-ISLNECELVSRELSP 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD ++ I+ +Y LEVSSPG+DR + +  DF+R+ G  V  ++       ++  G+++G 
Sbjct: 63  ILDEKDPIKENYFLEVSSPGLDRALKKDRDFVRYQGRDVDLKLYKPLNGCKQFEGELVGL 122

Query: 139 SE 140
           +E
Sbjct: 123 TE 124


>gi|317493624|ref|ZP_07952045.1| yhbC protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918567|gb|EFV39905.1| yhbC protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 152

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + F  V I  +   +  L+I+++ D+G + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMISAPVEALGFELVGIEFIRSHHSTLRIYIDSDEG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     ++R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTADHYVRFMGEEVSLVLRMAVQNRRKWQGII 119


>gi|59801638|ref|YP_208350.1| hypothetical protein NGO1284 [Neisseria gonorrhoeae FA 1090]
 gi|254494078|ref|ZP_05107249.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268595171|ref|ZP_06129338.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268597520|ref|ZP_06131687.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268599675|ref|ZP_06133842.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268604050|ref|ZP_06138217.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268682509|ref|ZP_06149371.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684673|ref|ZP_06151535.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|293398727|ref|ZP_06642903.1| hypothetical protein NGNG_02048 [Neisseria gonorrhoeae F62]
 gi|75355764|sp|Q5F799|RIMP_NEIG1 RecName: Full=Ribosome maturation factor rimP
 gi|259585809|sp|B4RMZ1|RIMP_NEIG2 RecName: Full=Ribosome maturation factor rimP
 gi|59718533|gb|AAW89938.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226513118|gb|EEH62463.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548560|gb|EEZ43978.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268551308|gb|EEZ46327.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583806|gb|EEZ48482.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268588181|gb|EEZ52857.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268622793|gb|EEZ55193.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268624957|gb|EEZ57357.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|291610867|gb|EFF39966.1| hypothetical protein NGNG_02048 [Neisseria gonorrhoeae F62]
          Length = 149

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 5/119 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           +G + DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S 
Sbjct: 3   IGSSMDIQTILEKTLPGLGYELVDFELAAQGTL--RVFIDKE-GGITVEDCATVSNHLSR 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  VE+I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G
Sbjct: 60  VFMVEDI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEG 116


>gi|229174483|ref|ZP_04302015.1| hypothetical protein bcere0006_35760 [Bacillus cereus MM3]
 gi|228609043|gb|EEK66333.1| hypothetical protein bcere0006_35760 [Bacillus cereus MM3]
          Length = 164

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I I  D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 163


>gi|138894779|ref|YP_001125232.1| hypothetical protein GTNG_1113 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134266292|gb|ABO66487.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 170

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 8/152 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++ EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  LD  
Sbjct: 22  VEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGVVSEKLSEKLDEV 80

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG-HVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + I  +Y LEVSSPG +RP+  + DF++  G HV        +G+KQ   G++     T 
Sbjct: 81  DPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYEPIAGEKQ-FEGELTAFDGTT 139

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L  + RG +      +AI ++ + SARL V
Sbjct: 140 VTLSVKDRGRQKT----VAIPYEKVASARLAV 167


>gi|261342616|ref|ZP_05970474.1| hypothetical protein ENTCAN_09187 [Enterobacter cancerogenus ATCC
           35316]
 gi|296104884|ref|YP_003615030.1| YhbC-like protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|288315264|gb|EFC54202.1| hypothetical protein ENTCAN_09187 [Enterobacter cancerogenus ATCC
           35316]
 gi|295059343|gb|ADF64081.1| YhbC-like protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 140

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 1/107 (0%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I  
Sbjct: 2   ITAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPITV 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            Y LEVSSPG+DRPM     ++R+ G  VA  + ++  +++K  G I
Sbjct: 61  AYNLEVSSPGLDRPMFTAEHYVRFTGEEVALVLRMAVQNRRKWQGII 107


>gi|120556257|ref|YP_960608.1| hypothetical protein Maqu_3350 [Marinobacter aquaeolei VT8]
 gi|166990772|sp|A1U602|RIMP_MARAV RecName: Full=Ribosome maturation factor rimP
 gi|120326106|gb|ABM20421.1| protein of unknown function DUF150 [Marinobacter aquaeolei VT8]
          Length = 153

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 68/115 (59%), Gaps = 1/115 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++PV+E + +    I       +  L++F++  +  + + DCE++S+ +S ++DVE
Sbjct: 8   LEDILRPVVEGLGYEFWGIEFRSHGHHSKLRVFIDDAENGIAIDDCEKVSRQVSGVMDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           + I+  Y LEVSSPG+DRP+ R   +  + GH V  ++ ++   ++K +G I G 
Sbjct: 68  DPIQTEYTLEVSSPGMDRPLFRLEQYEAFIGHKVQIKLRMAFEGRRKFLGLIKGV 122


>gi|317129166|ref|YP_004095448.1| hypothetical protein Bcell_2460 [Bacillus cellulosilyticus DSM
           2522]
 gi|315474114|gb|ADU30717.1| protein of unknown function DUF150 [Bacillus cellulosilyticus DSM
           2522]
          Length = 154

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 6/158 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +  ++  +++P++++MS   V I   +E KN  L+++++RD G + L DC  +S+ +S
Sbjct: 1   MSIREEVEVLVEPILQQMSLELVDIEYKKEGKNWFLRVYIDRD-GGVDLDDCTAVSEQLS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I+  Y LEVSSPG +RP+  + D +R  G  +          ++   GK+M 
Sbjct: 60  EALDKHDPIDQMYYLEVSSPGAERPLKTEQDIVRAVGKYINVTTYAPIDGEKVFEGKLMH 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            ++    +E + +      EL     +D +  ARL + 
Sbjct: 120 FNDGILSMETKVKTRVKTVEL----PYDKIAKARLAIV 153


>gi|312898334|ref|ZP_07757724.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310620253|gb|EFQ03823.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 153

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 80/145 (55%), Gaps = 6/145 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S  ++ +I       V +  + E++  L++F++++ G + L DC+ +S+ +S  LDV++
Sbjct: 10  VSQEVETIIAGTDLELVDVEYVRERDWYLRVFIDKE-GGVGLEDCQAVSEKLSEFLDVKD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG-- 142
            I   Y LEVSSPG+DR + + +DF+R+    V           + L  +++G  ++G  
Sbjct: 69  PITDKYLLEVSSPGLDRILKKDTDFVRYKDRHVDVHFFTPYKGVKSLTARLVGKDKSGVV 128

Query: 143 -FFLEKEKRG--EKDMNELQIAISF 164
              +++E      KD++++++ I F
Sbjct: 129 HLLIDEEDAAIDSKDISQIRLHIDF 153


>gi|156935696|ref|YP_001439612.1| hypothetical protein ESA_03563 [Cronobacter sakazakii ATCC BAA-894]
 gi|259585769|sp|A7MQE3|RIMP_ENTS8 RecName: Full=Ribosome maturation factor rimP
 gi|156533950|gb|ABU78776.1| hypothetical protein ESA_03563 [Cronobacter sakazakii ATCC BAA-894]
          Length = 160

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+
Sbjct: 18  LTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-ITVDDCADVSHQVSSVLDVED 76

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 77  PITVAYNLEVSSPGLDRPLFTAEHYARYTGEEVTLVLRMAVQNRRKWQGII 127


>gi|217970107|ref|YP_002355341.1| hypothetical protein Tmz1t_1690 [Thauera sp. MZ1T]
 gi|217507434|gb|ACK54445.1| protein of unknown function DUF150 [Thauera sp. MZ1T]
          Length = 144

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 12/153 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  D+  +I+ V+  + +  V I     K  LL++F++ + G +T+ DC  +S  +  + 
Sbjct: 1   MRADVEGLIEQVVTGLGYELVDIEF-SPKGRLLRVFLDIERG-ITVDDCATVSNQLQRVF 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VEN+   + RLEVSSPG+DRP+ + +DF R+ G      + L  G+++  +G I    +
Sbjct: 59  EVENV--DYDRLEVSSPGLDRPLKKLADFERFAGEQAQVRLSLPIGNQRNFVGVIERVQD 116

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               L  EK GE       + + FD +  ARL+
Sbjct: 117 GAVALRTEK-GE-------VLLPFDDIEKARLV 141


>gi|269797843|ref|YP_003311743.1| hypothetical protein Vpar_0782 [Veillonella parvula DSM 2008]
 gi|269094472|gb|ACZ24463.1| protein of unknown function DUF150 [Veillonella parvula DSM 2008]
          Length = 152

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 70/117 (59%), Gaps = 1/117 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ +S +LD ++
Sbjct: 10  VSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEKLSAVLDEKD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            I  +Y LEVSSPG+DR + +  D +R+NG  V  ++  +    ++  G + G ++T
Sbjct: 69  PITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKAINGSKQFTGALQGFTDT 125


>gi|94263058|ref|ZP_01286877.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
 gi|94272102|ref|ZP_01292068.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
 gi|93450238|gb|EAT01519.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
 gi|93456601|gb|EAT06709.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
          Length = 155

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
            D  L+  ++ ++QPV+E+       +    E    +L++ ++ DDG +TL DC  +S+ 
Sbjct: 4   ADKALSARLTELLQPVVEDHGLELADLQFRREPAGWVLRLVIDGDDG-VTLDDCTRISRE 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           +S +L+VE+ IE  + LEVSSPG+DRP+ R+ D+ R  G 
Sbjct: 63  VSHLLEVEDPIEQAFNLEVSSPGLDRPLKREQDYRRCRGR 102


>gi|238760243|ref|ZP_04621388.1| hypothetical protein yaldo0001_39490 [Yersinia aldovae ATCC 35236]
 gi|238701566|gb|EEP94138.1| hypothetical protein yaldo0001_39490 [Yersinia aldovae ATCC 35236]
          Length = 152

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGENVTLVLRMAMQNRRKWQGII 119


>gi|260596200|ref|YP_003208771.1| ribosome maturation protein RimP [Cronobacter turicensis z3032]
 gi|260215377|emb|CBA27399.1| UPF0090 protein yhbC [Cronobacter turicensis z3032]
          Length = 150

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+
Sbjct: 8   LTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            +   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 67  PVTVAYNLEVSSPGLDRPLFTAEHYARYTGEEVTLVLRMAVQNRRKWQGVI 117


>gi|295097659|emb|CBK86749.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 140

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 1/107 (0%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I  
Sbjct: 2   ITAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPITV 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            Y LEVSSPG+DRPM     ++R+ G  VA  + ++  +++K  G I
Sbjct: 61  AYNLEVSSPGLDRPMFTDEHYVRFTGEEVALVLRMAVQNRRKWQGII 107


>gi|251780527|ref|ZP_04823447.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084842|gb|EES50732.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 153

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 65/94 (69%), Gaps = 1/94 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++P++EE+S+    +  ++E     L+I++++++ +++L DCE++S+ +S +LDVE
Sbjct: 10  VEVLVKPIVEELSYELYYLEYVKENGEYYLRIYIDKEEDSISLNDCEKVSRRVSEMLDVE 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + IE  Y LEVSSPG++R + ++  F ++ G  V
Sbjct: 70  DPIEDSYYLEVSSPGLNRGLYKEEHFKKFIGREV 103


>gi|289449993|ref|YP_003474584.1| hypothetical protein HMPREF0868_0246 [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184540|gb|ADC90965.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 155

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A    S+   +I +M +  V +  ++E  +  L+ ++++  G + L DC E+S++I P+
Sbjct: 6   IAAQAESLCAKLINDMGYDLVDVEFVKEGPDRFLRFYIDKR-GGVGLDDCTEVSRSIDPL 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D    I+  Y LEVSSPG+DRP+   SD LR  G  V   +  +    +K +G+I+   
Sbjct: 65  IDENLTIDQAYYLEVSSPGLDRPLKTDSDLLRHQGEKVEVTLYQARDGHKKFVGEIVAVD 124

Query: 140 ETGFFLEKEKRG 151
           +    L  E  G
Sbjct: 125 DGVLKLAVENMG 136


>gi|153997275|ref|ZP_02022375.1| hypothetical protein YPE_3717 [Yersinia pestis CA88-4125]
 gi|229839150|ref|ZP_04459309.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229896639|ref|ZP_04511806.1| conserved protein [Yersinia pestis Pestoides A]
 gi|229899714|ref|ZP_04514855.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229903876|ref|ZP_04518989.1| conserved protein [Yersinia pestis Nepal516]
 gi|238787592|ref|ZP_04631390.1| hypothetical protein yfred0001_21120 [Yersinia frederiksenii ATCC
           33641]
 gi|238793020|ref|ZP_04636649.1| hypothetical protein yinte0001_33150 [Yersinia intermedia ATCC
           29909]
 gi|34223130|sp|Q8ZBC0|RIMP_YERPE RecName: Full=Ribosome maturation factor rimP
 gi|81640534|sp|Q66F62|RIMP_YERPS RecName: Full=Ribosome maturation factor rimP
 gi|51588112|emb|CAH19718.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|115349123|emb|CAL22086.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149288912|gb|EDM38992.1| hypothetical protein YPE_3717 [Yersinia pestis CA88-4125]
 gi|229679646|gb|EEO75749.1| conserved protein [Yersinia pestis Nepal516]
 gi|229687206|gb|EEO79281.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229695516|gb|EEO85563.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700417|gb|EEO88449.1| conserved protein [Yersinia pestis Pestoides A]
 gi|238724379|gb|EEQ16021.1| hypothetical protein yfred0001_21120 [Yersinia frederiksenii ATCC
           33641]
 gi|238727620|gb|EEQ19145.1| hypothetical protein yinte0001_33150 [Yersinia intermedia ATCC
           29909]
 gi|320013701|gb|ADV97272.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 152

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 119


>gi|119898400|ref|YP_933613.1| hypothetical protein azo2109 [Azoarcus sp. BH72]
 gi|259585699|sp|A1K7C1|RIMP_AZOSB RecName: Full=Ribosome maturation factor rimP
 gi|119670813|emb|CAL94726.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 144

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 84/153 (54%), Gaps = 12/153 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   + ++++ V+  + +  V   L   K  LL++F++ + G +T+ DC  +S  ++ + 
Sbjct: 1   MQAGVENLVEQVVSGLGYELVDFEL-SPKGRLLRVFIDIERG-VTVDDCATVSNQLTRVF 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VEN+   + RLEVSSPG+DRP+ + +DF R+ G  +   + L  G+++  +G + G  E
Sbjct: 59  EVENV--DYDRLEVSSPGLDRPLKKLADFERFAGQEIQLRLSLPIGNQRNFVGVLQGVRE 116

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   L  EK GE       +   F+ +  ARL+
Sbjct: 117 SSVVLLTEK-GE-------LLAPFEEIEKARLV 141


>gi|313893703|ref|ZP_07827270.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441717|gb|EFR60142.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 152

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 69/117 (58%), Gaps = 1/117 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ +S +LD ++
Sbjct: 10  VSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEKLSAVLDEKD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            I  +Y LEVSSPG+DR + +  D +R+NG  V  ++       ++  G + G ++T
Sbjct: 69  PITENYLLEVSSPGLDRVLKKDKDLIRYNGRDVDIQLFKPVNGSKQFTGALQGFTDT 125


>gi|288933402|ref|YP_003437461.1| hypothetical protein Kvar_0519 [Klebsiella variicola At-22]
 gi|288888131|gb|ADC56449.1| protein of unknown function DUF150 [Klebsiella variicola At-22]
          Length = 152

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 69/120 (57%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 60  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGII 119


>gi|310823423|ref|YP_003955781.1| hypothetical protein STAUR_6197 [Stigmatella aurantiaca DW4/3-1]
 gi|309396495|gb|ADO73954.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 161

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 3/128 (2%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++++P++       + +  + E+   +L++F+++  G + L +C ++S+A+ P LDVE++
Sbjct: 16  TLLEPIVAGEGLELIDLEFVREREGWVLRLFIDKPGGRVGLDECSQVSRAVDPALDVEDL 75

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIMGTSETGF 143
           +   Y LEVSSPG++RP+ + S + R  G  V  +     GD  ++   G +   +  G 
Sbjct: 76  VPNEYNLEVSSPGVNRPLKKLSHYERVKGQKVKVKTFGPIGDPPRKNFSGTLTEVTAEGI 135

Query: 144 FLEKEKRG 151
            +E E  G
Sbjct: 136 AVEVEGAG 143


>gi|167401220|ref|ZP_02306720.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|259645220|sp|A7FMS4|RIMP_YERP3 RecName: Full=Ribosome maturation factor rimP
 gi|21957404|gb|AAM84274.1|AE013671_1 hypothetical protein y0686 [Yersinia pestis KIM 10]
 gi|45435296|gb|AAS60855.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|152961108|gb|ABS48569.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           31758]
 gi|167049245|gb|EDR60653.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
          Length = 154

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  +S +LDVE+
Sbjct: 12  LTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQVSAVLDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 71  PITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 121


>gi|225027046|ref|ZP_03716238.1| hypothetical protein EUBHAL_01302 [Eubacterium hallii DSM 3353]
 gi|224955510|gb|EEG36719.1| hypothetical protein EUBHAL_01302 [Eubacterium hallii DSM 3353]
          Length = 162

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 6/149 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +      ++ P+IEE  F  V +  + E  N  L+++ +++ G + + DC  +S+A+   
Sbjct: 15  IVAKTEELVTPIIEENHFELVDVEYVREGANWYLRVYADKE-GGINIDDCVLISRALEEK 73

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ I   Y LEVSSPG+ RP+ ++ DF R  G  V C++  +   +++  G +   +
Sbjct: 74  LDAEDFISDAYILEVSSPGLGRPLKKEKDFKRSLGKSVECKLYKAINKQKEFEGILKDFT 133

Query: 140 ETGFFLEKEKR----GEKDMNELQIAISF 164
           E    +E E        KD+  +++AI F
Sbjct: 134 EDTVTIETEGNELVLDRKDIAMIRLAIDF 162


>gi|228902320|ref|ZP_04066477.1| hypothetical protein bthur0014_34980 [Bacillus thuringiensis IBL
           4222]
 gi|228909641|ref|ZP_04073464.1| hypothetical protein bthur0013_37930 [Bacillus thuringiensis IBL
           200]
 gi|228940905|ref|ZP_04103464.1| hypothetical protein bthur0008_35450 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228966762|ref|ZP_04127806.1| hypothetical protein bthur0004_35680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228973834|ref|ZP_04134410.1| hypothetical protein bthur0003_35890 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980423|ref|ZP_04140733.1| hypothetical protein bthur0002_35910 [Bacillus thuringiensis Bt407]
 gi|229098286|ref|ZP_04229233.1| hypothetical protein bcere0020_35200 [Bacillus cereus Rock3-29]
 gi|229104379|ref|ZP_04235048.1| hypothetical protein bcere0019_35270 [Bacillus cereus Rock3-28]
 gi|229117303|ref|ZP_04246681.1| hypothetical protein bcere0017_35830 [Bacillus cereus Rock1-3]
 gi|229162753|ref|ZP_04290710.1| hypothetical protein bcere0009_35230 [Bacillus cereus R309803]
 gi|228620635|gb|EEK77504.1| hypothetical protein bcere0009_35230 [Bacillus cereus R309803]
 gi|228666203|gb|EEL21667.1| hypothetical protein bcere0017_35830 [Bacillus cereus Rock1-3]
 gi|228679077|gb|EEL33285.1| hypothetical protein bcere0019_35270 [Bacillus cereus Rock3-28]
 gi|228685184|gb|EEL39115.1| hypothetical protein bcere0020_35200 [Bacillus cereus Rock3-29]
 gi|228779243|gb|EEM27500.1| hypothetical protein bthur0002_35910 [Bacillus thuringiensis Bt407]
 gi|228785859|gb|EEM33862.1| hypothetical protein bthur0003_35890 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228792861|gb|EEM40419.1| hypothetical protein bthur0004_35680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228818741|gb|EEM64807.1| hypothetical protein bthur0008_35450 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228849930|gb|EEM94761.1| hypothetical protein bthur0013_37930 [Bacillus thuringiensis IBL
           200]
 gi|228857289|gb|EEN01792.1| hypothetical protein bthur0014_34980 [Bacillus thuringiensis IBL
           4222]
          Length = 164

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I I  D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 163


>gi|65321144|ref|ZP_00394103.1| COG0779: Uncharacterized protein conserved in bacteria [Bacillus
           anthracis str. A2012]
          Length = 174

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 16  RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 74

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 75  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 134

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I I  D + +ARL VT
Sbjct: 135 GKMLSYDGTTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 173


>gi|322615293|gb|EFY12214.1| hypothetical protein SEEM315_15045 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618348|gb|EFY15239.1| hypothetical protein SEEM971_03440 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622847|gb|EFY19691.1| hypothetical protein SEEM973_09985 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626831|gb|EFY23628.1| hypothetical protein SEEM974_17064 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631400|gb|EFY28160.1| hypothetical protein SEEM201_11154 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635333|gb|EFY32047.1| hypothetical protein SEEM202_21223 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643468|gb|EFY40031.1| hypothetical protein SEEM954_03710 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647096|gb|EFY43597.1| hypothetical protein SEEM054_06288 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648899|gb|EFY45344.1| hypothetical protein SEEM675_09177 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655091|gb|EFY51402.1| hypothetical protein SEEM965_16526 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657694|gb|EFY53962.1| hypothetical protein SEEM19N_17226 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664190|gb|EFY60388.1| hypothetical protein SEEM801_14392 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667473|gb|EFY63635.1| hypothetical protein SEEM507_15450 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674721|gb|EFY70813.1| hypothetical protein SEEM877_12264 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675646|gb|EFY71719.1| hypothetical protein SEEM867_11084 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682282|gb|EFY78305.1| hypothetical protein SEEM180_00717 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684885|gb|EFY80883.1| hypothetical protein SEEM600_02779 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323191868|gb|EFZ77116.1| hypothetical protein SEEM581_13996 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199027|gb|EFZ84124.1| hypothetical protein SEEM501_06456 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204273|gb|EFZ89282.1| hypothetical protein SEEM460_13042 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207620|gb|EFZ92567.1| hypothetical protein SEEM020_13687 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211327|gb|EFZ96171.1| hypothetical protein SEEM6152_16965 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323214731|gb|EFZ99480.1| hypothetical protein SEEM0077_18874 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221211|gb|EGA05637.1| hypothetical protein SEEM0047_04951 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224048|gb|EGA08341.1| hypothetical protein SEEM0055_21925 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230303|gb|EGA14422.1| hypothetical protein SEEM0052_18579 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233279|gb|EGA17373.1| hypothetical protein SEEM3312_09406 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239316|gb|EGA23366.1| hypothetical protein SEEM5258_06940 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242433|gb|EGA26459.1| hypothetical protein SEEM1156_15792 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246943|gb|EGA30909.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254124|gb|EGA37944.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255241|gb|EGA39018.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262704|gb|EGA46260.1| hypothetical protein SEEM8284_03071 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264014|gb|EGA47522.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269400|gb|EGA52855.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 140

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 60  VAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 107


>gi|108806046|ref|YP_649962.1| hypothetical protein YPA_0048 [Yersinia pestis Antiqua]
 gi|108813402|ref|YP_649169.1| hypothetical protein YPN_3242 [Yersinia pestis Nepal516]
 gi|145600794|ref|YP_001164870.1| hypothetical protein YPDSF_3547 [Yersinia pestis Pestoides F]
 gi|161484876|ref|NP_668023.2| hypothetical protein y0686 [Yersinia pestis KIM 10]
 gi|161511440|ref|NP_991978.2| hypothetical protein YP_0585 [Yersinia pestis biovar Microtus str.
           91001]
 gi|161760591|ref|YP_069021.2| hypothetical protein YPTB0478 [Yersinia pseudotuberculosis IP
           32953]
 gi|162419022|ref|YP_001608284.1| hypothetical protein YpAngola_A3991 [Yersinia pestis Angola]
 gi|166010175|ref|ZP_02231073.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|167420580|ref|ZP_02312333.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423588|ref|ZP_02315341.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170025947|ref|YP_001722452.1| hypothetical protein YPK_3732 [Yersinia pseudotuberculosis YPIII]
 gi|186893839|ref|YP_001870951.1| hypothetical protein YPTS_0508 [Yersinia pseudotuberculosis PB1/+]
 gi|218930512|ref|YP_002348387.1| hypothetical protein YPO3498 [Yersinia pestis CO92]
 gi|229294897|ref|YP_001402552.2| hypothetical protein YpsIP31758_3598 [Yersinia pseudotuberculosis
           IP 31758]
 gi|270489134|ref|ZP_06206208.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294505369|ref|YP_003569431.1| hypothetical protein YPZ3_3260 [Yersinia pestis Z176003]
 gi|122383879|sp|Q1CC05|RIMP_YERPA RecName: Full=Ribosome maturation factor rimP
 gi|122384216|sp|Q1CEL1|RIMP_YERPN RecName: Full=Ribosome maturation factor rimP
 gi|259511439|sp|A4TRI5|RIMP_YERPP RecName: Full=Ribosome maturation factor rimP
 gi|259511440|sp|B1JLY2|RIMP_YERPY RecName: Full=Ribosome maturation factor rimP
 gi|259645221|sp|B2K2Q3|RIMP_YERPB RecName: Full=Ribosome maturation factor rimP
 gi|259645222|sp|A9R5A1|RIMP_YERPG RecName: Full=Ribosome maturation factor rimP
 gi|108777050|gb|ABG19569.1| hypothetical protein YPN_3242 [Yersinia pestis Nepal516]
 gi|108777959|gb|ABG12017.1| hypothetical protein YPA_0048 [Yersinia pestis Antiqua]
 gi|145212490|gb|ABP41897.1| hypothetical protein YPDSF_3547 [Yersinia pestis Pestoides F]
 gi|162351837|gb|ABX85785.1| conserved hypothetical protein [Yersinia pestis Angola]
 gi|165991082|gb|EDR43383.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166961386|gb|EDR57407.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167057758|gb|EDR67504.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169752481|gb|ACA69999.1| protein of unknown function DUF150 [Yersinia pseudotuberculosis
           YPIII]
 gi|186696865|gb|ACC87494.1| protein of unknown function DUF150 [Yersinia pseudotuberculosis
           PB1/+]
 gi|262363435|gb|ACY60156.1| hypothetical protein YPD4_3252 [Yersinia pestis D106004]
 gi|262367190|gb|ACY63747.1| hypothetical protein YPD8_3075 [Yersinia pestis D182038]
 gi|270337638|gb|EFA48415.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294355828|gb|ADE66169.1| hypothetical protein YPZ3_3260 [Yersinia pestis Z176003]
          Length = 150

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  +S +LDVE+
Sbjct: 8   LTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 117


>gi|197364150|ref|YP_002143787.1| hypothetical protein SSPA2946 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|207858538|ref|YP_002245189.1| hypothetical protein SEN3123 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224585086|ref|YP_002638885.1| hypothetical protein SPC_3359 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238910083|ref|ZP_04653920.1| hypothetical protein SentesTe_02955 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825803|ref|ZP_06544971.1| hypothetical protein Salmonellentericaenterica_10351 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25302491|pir||AB0902 conserved hypothetical protein STY3469 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421847|gb|AAL22160.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16504356|emb|CAD07808.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139176|gb|AAO70744.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129477|gb|AAV78983.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|160867493|gb|ABX24116.1| hypothetical protein SARI_04336 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161365658|gb|ABX69426.1| hypothetical protein SPAB_04100 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197095627|emb|CAR61195.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|206710341|emb|CAR34699.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224469614|gb|ACN47444.1| hypothetical protein SPC_3359 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261248454|emb|CBG26291.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|301159838|emb|CBW19357.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914314|dbj|BAJ38288.1| hypothetical protein STMDT12_C33450 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321225972|gb|EFX51026.1| clustered with transcription termination protein NusA [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|332990146|gb|AEF09129.1| hypothetical protein STMUK_3272 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 140

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 60  VAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 107


>gi|256028608|ref|ZP_05442442.1| putative cytoplasmic protein [Fusobacterium sp. D11]
 gi|289766526|ref|ZP_06525904.1| conserved hypothetical protein [Fusobacterium sp. D11]
 gi|289718081|gb|EFD82093.1| conserved hypothetical protein [Fusobacterium sp. D11]
          Length = 156

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 82/148 (55%), Gaps = 6/148 (4%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQA 75
           G+  +   I+ ++ P +EEM+   V +  +++     ++IF+E  +G++++ DC +LS  
Sbjct: 3   GNNQIVEKITEIVNPFVEEMNLSLVDVEYVQDGAYWYIRIFIENLNGDLSIEDCSKLSSK 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ--KLIG 133
           I     +E +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK+  K I 
Sbjct: 63  IED--KIEKLIEHKFFLEVSSPGLERPLKKIEDYIRFTGEKITLHLKHKLDDKKQFKAII 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIA 161
           K +  +   F ++K K  E   NE++ A
Sbjct: 121 KEVNGNNIIFLIDK-KEIEIKFNEIRKA 147


>gi|290511547|ref|ZP_06550916.1| hypothetical protein HMPREF0485_03317 [Klebsiella sp. 1_1_55]
 gi|289776540|gb|EFD84539.1| hypothetical protein HMPREF0485_03317 [Klebsiella sp. 1_1_55]
          Length = 154

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 12  LTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 71  PITVAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGII 121


>gi|282848826|ref|ZP_06258219.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|294791738|ref|ZP_06756886.1| conserved hypothetical protein [Veillonella sp. 6_1_27]
 gi|294793599|ref|ZP_06758736.1| conserved hypothetical protein [Veillonella sp. 3_1_44]
 gi|282581480|gb|EFB86870.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|294455169|gb|EFG23541.1| conserved hypothetical protein [Veillonella sp. 3_1_44]
 gi|294456968|gb|EFG25330.1| conserved hypothetical protein [Veillonella sp. 6_1_27]
          Length = 152

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 69/117 (58%), Gaps = 1/117 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ +S +LD ++
Sbjct: 10  VSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEKLSAVLDEKD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            I  +Y LEVSSPG+DR + +  D +R+NG  V  ++       ++  G + G ++T
Sbjct: 69  PITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKPVNGSKQFTGALQGFTDT 125


>gi|228916454|ref|ZP_04080020.1| hypothetical protein bthur0012_36690 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228928865|ref|ZP_04091897.1| hypothetical protein bthur0010_35570 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228935131|ref|ZP_04097958.1| hypothetical protein bthur0009_35840 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228947536|ref|ZP_04109826.1| hypothetical protein bthur0007_36640 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228986960|ref|ZP_04147086.1| hypothetical protein bthur0001_36350 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229092857|ref|ZP_04223991.1| hypothetical protein bcere0021_36040 [Bacillus cereus Rock3-42]
 gi|229123330|ref|ZP_04252534.1| hypothetical protein bcere0016_36190 [Bacillus cereus 95/8201]
 gi|229140458|ref|ZP_04269013.1| hypothetical protein bcere0013_35570 [Bacillus cereus BDRD-ST26]
 gi|229157393|ref|ZP_04285471.1| hypothetical protein bcere0010_35760 [Bacillus cereus ATCC 4342]
 gi|229186054|ref|ZP_04313224.1| hypothetical protein bcere0004_36010 [Bacillus cereus BGSC 6E1]
 gi|229197927|ref|ZP_04324643.1| hypothetical protein bcere0001_34630 [Bacillus cereus m1293]
 gi|228585645|gb|EEK43747.1| hypothetical protein bcere0001_34630 [Bacillus cereus m1293]
 gi|228597473|gb|EEK55123.1| hypothetical protein bcere0004_36010 [Bacillus cereus BGSC 6E1]
 gi|228626120|gb|EEK82869.1| hypothetical protein bcere0010_35760 [Bacillus cereus ATCC 4342]
 gi|228643019|gb|EEK99295.1| hypothetical protein bcere0013_35570 [Bacillus cereus BDRD-ST26]
 gi|228660106|gb|EEL15742.1| hypothetical protein bcere0016_36190 [Bacillus cereus 95/8201]
 gi|228690479|gb|EEL44262.1| hypothetical protein bcere0021_36040 [Bacillus cereus Rock3-42]
 gi|228772738|gb|EEM21178.1| hypothetical protein bthur0001_36350 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228812056|gb|EEM58387.1| hypothetical protein bthur0007_36640 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228824496|gb|EEM70301.1| hypothetical protein bthur0009_35840 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228830672|gb|EEM76277.1| hypothetical protein bthur0010_35570 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228843033|gb|EEM88115.1| hypothetical protein bthur0012_36690 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 164

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I I  D + +ARL VT
Sbjct: 125 GKMLSYDGTTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 163


>gi|319941975|ref|ZP_08016296.1| ribosome maturation factor rimP [Sutterella wadsworthensis 3_1_45B]
 gi|319804628|gb|EFW01498.1| ribosome maturation factor rimP [Sutterella wadsworthensis 3_1_45B]
          Length = 186

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 10/128 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M  +G +S++++  +E + +  V +  L+   + + I +ERD G ++L DCE +S  ++ 
Sbjct: 1   MNSSGALSALVKKTVEGLGYELVDVERLQRGLVRVTIDIERD-GGISLEDCERVSDQLTH 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV-------LSSGDKQKL 131
           +  VE++   + RLEVSSPG++RP+ R  D+ R+ G +   E+             ++KL
Sbjct: 60  LFTVEDV--SYERLEVSSPGVERPLKRARDWERFTGELAWVELFAPLKAEGFPEAGRRKL 117

Query: 132 IGKIMGTS 139
            G+I+G S
Sbjct: 118 EGRIVGIS 125


>gi|240128558|ref|ZP_04741219.1| hypothetical protein NgonS_08003 [Neisseria gonorrhoeae SK-93-1035]
 gi|317164605|gb|ADV08146.1| hypothetical protein NGTW08_1178 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 143

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G
Sbjct: 59  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEG 110


>gi|118479037|ref|YP_896188.1| hypothetical protein BALH_3445 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118418262|gb|ABK86681.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 174

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 16  RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 74

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 75  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 134

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I I  D + +ARL VT
Sbjct: 135 GKMLSYDGTTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 173


>gi|206577891|ref|YP_002236419.1| hypothetical protein KPK_0544 [Klebsiella pneumoniae 342]
 gi|229269511|ref|YP_001337240.2| hypothetical protein KPN_03578 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259585803|sp|B5XSX2|RIMP_KLEP3 RecName: Full=Ribosome maturation factor rimP
 gi|259585806|sp|A6TEI9|RIMP_KLEP7 RecName: Full=Ribosome maturation factor rimP
 gi|206566949|gb|ACI08725.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
          Length = 150

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 8   LTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGII 117


>gi|75760861|ref|ZP_00740875.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491645|gb|EAO54847.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 174

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 16  RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 74

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 75  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 134

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   GT+ T     K ++ E       I I  D + +ARL VT
Sbjct: 135 GKLLSYDGTTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 173


>gi|239999348|ref|ZP_04719272.1| hypothetical protein Ngon3_07677 [Neisseria gonorrhoeae 35/02]
 gi|240014532|ref|ZP_04721445.1| hypothetical protein NgonD_07784 [Neisseria gonorrhoeae DGI18]
 gi|240016978|ref|ZP_04723518.1| hypothetical protein NgonFA_07392 [Neisseria gonorrhoeae FA6140]
 gi|240081420|ref|ZP_04725963.1| hypothetical protein NgonF_08941 [Neisseria gonorrhoeae FA19]
 gi|240113615|ref|ZP_04728105.1| hypothetical protein NgonM_08610 [Neisseria gonorrhoeae MS11]
 gi|240118337|ref|ZP_04732399.1| hypothetical protein NgonPID_07718 [Neisseria gonorrhoeae PID1]
 gi|240121054|ref|ZP_04734016.1| hypothetical protein NgonPI_04654 [Neisseria gonorrhoeae PID24-1]
 gi|240123885|ref|ZP_04736841.1| hypothetical protein NgonP_08079 [Neisseria gonorrhoeae PID332]
 gi|240126084|ref|ZP_04738970.1| hypothetical protein NgonSK_07689 [Neisseria gonorrhoeae SK-92-679]
          Length = 143

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELAAQGTL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G
Sbjct: 59  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEG 110


>gi|78222793|ref|YP_384540.1| hypothetical protein Gmet_1583 [Geobacter metallireducens GS-15]
 gi|91208011|sp|Q39VA9|RIMP_GEOMG RecName: Full=Ribosome maturation factor rimP
 gi|78194048|gb|ABB31815.1| protein of unknown function DUF150 [Geobacter metallireducens
           GS-15]
          Length = 159

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 53/71 (74%), Gaps = 1/71 (1%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E ++++L++FV++  G +TL DC  +S+  S ILDVE+ I  +Y LEVSSPG++RP+ R+
Sbjct: 33  EGRHMVLRLFVDKA-GGITLDDCALVSREFSEILDVEDFISENYTLEVSSPGLNRPLKRE 91

Query: 107 SDFLRWNGHVV 117
           SD+ R+ G +V
Sbjct: 92  SDYERYRGRLV 102


>gi|161501882|ref|YP_048824.2| hypothetical protein ECA0710 [Pectobacterium atrosepticum SCRI1043]
          Length = 150

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 67/111 (60%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+
Sbjct: 8   LTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++RP+   + +L + G  VA  + ++  +++K +G I
Sbjct: 67  PITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVAVVLRMAVQNRRKWLGVI 117


>gi|91208369|sp|Q6D9A7|RIMP_ERWCT RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 67/111 (60%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+
Sbjct: 10  LTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVED 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++RP+   + +L + G  VA  + ++  +++K +G I
Sbjct: 69  PITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVAVVLRMAVQNRRKWLGVI 119


>gi|312134895|ref|YP_004002233.1| hypothetical protein Calow_0865 [Caldicellulosiruptor owensensis
           OL]
 gi|311774946|gb|ADQ04433.1| protein of unknown function DUF150 [Caldicellulosiruptor owensensis
           OL]
          Length = 151

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 89/152 (58%), Gaps = 12/152 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELSER 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG--DKQKLIGKIMG 137
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G +V  E+ LS    ++ K  G+++ 
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGRLV--EVFLSQPFLNRTKFTGELVE 120

Query: 138 TSETGFFL--EKEKRG---EKDMNELQIAISF 164
            ++    L  +KEK     EK + +++IAI F
Sbjct: 121 KNDKFLVLIMDKEKIDIPIEK-VKKVKIAIRF 151


>gi|329997773|ref|ZP_08302912.1| hypothetical protein HMPREF9538_00552 [Klebsiella sp. MS 92-3]
 gi|150956943|gb|ABR78973.1| hypothetical protein KPN_03578 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|328538907|gb|EGF64968.1| hypothetical protein HMPREF9538_00552 [Klebsiella sp. MS 92-3]
          Length = 140

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 61/103 (59%), Gaps = 1/103 (0%)

Query: 33  IEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRL 92
           +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+ I   Y L
Sbjct: 6   VEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVEDPITVAYNL 64

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           EVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 65  EVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGII 107


>gi|307243344|ref|ZP_07525508.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306493291|gb|EFM65280.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 155

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 86/152 (56%), Gaps = 9/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +   IQP +E   +  V +  ++E  +  L++ ++ ++G + L +CE++S+ I+PI
Sbjct: 5   IAQRVEEKIQPSVEGFGYELVDVEYVKEAGVYYLRVIIDHENG-IGLDECEKVSREINPI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIMG 137
           LD E+ IE +Y LEV SPGIDR + R  +F ++ G  V  ++  +  D   ++   ++ G
Sbjct: 64  LDEEDYIEDNYFLEVCSPGIDRVLKRDKEFSKYAGKTVEVKLYKNDQDLKTKQFEAELRG 123

Query: 138 TSETGFFL-----EKEKRGEKDMNELQIAISF 164
             + G  +      ++K   K++ ++++A+ F
Sbjct: 124 LDQDGMVVVSIGDTEKKFDRKEIAQIRLAVVF 155


>gi|157964684|ref|YP_001499508.1| hypothetical protein RMA_0855 [Rickettsia massiliae MTU5]
 gi|157844460|gb|ABV84961.1| hypothetical protein RMA_0855 [Rickettsia massiliae MTU5]
          Length = 164

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 89/160 (55%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVE 83
           I++VI+  + +M F  V + +      +++I ++  +G  +++ DC + S+ IS ILDVE
Sbjct: 11  ITNVIEESLTDMGFELVLVKVKGVNPKVVEILIDSLNGERISVEDCTKASRTISAILDVE 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+       
Sbjct: 71  DLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAENNKI 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E        E ++ I +D + +A L++T+E+ +  L
Sbjct: 131 YLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLL 162


>gi|126657164|ref|ZP_01728330.1| hypothetical protein CY0110_24586 [Cyanothece sp. CCY0110]
 gi|126621435|gb|EAZ92146.1| hypothetical protein CY0110_24586 [Cyanothece sp. CCY0110]
          Length = 151

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 1/132 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+++EM    V++     K   +L++ +   D + +L DCE++S+A+  +
Sbjct: 5   LIPQIIDLATPIVQEMGLDVVEVVFQTNKRPPVLRVDIRNPDSDTSLNDCEQVSRALEAV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+ G Y LE+SSPGI R +  + DF+ + G  V         DK++  G++ G  
Sbjct: 65  LDETAIMPGAYVLEISSPGISRYLSDERDFVAFKGFEVNVTTNPPYKDKKEWQGRLQGRD 124

Query: 140 ETGFFLEKEKRG 151
           +   +L ++ R 
Sbjct: 125 DKAVYLNRKGRA 136


>gi|237743253|ref|ZP_04573734.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
 gi|229433032|gb|EEO43244.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
          Length = 156

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 4/147 (2%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQA 75
           G+  +   I+ ++ P +EEM+   V +  +++     ++IF+E  +G++++ DC +LS  
Sbjct: 3   GNNQIVEKITEIVNPFVEEMNLSLVDVEYVQDGAYWYIRIFIENLNGDLSIEDCSKLSSK 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I     +E +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I
Sbjct: 63  IED--KIEKLIEHKFFLEVSSPGLERPLKKIEDYIRFTGEKITLHLKHKLDDKKQFKAII 120

Query: 136 MGTSETG-FFLEKEKRGEKDMNELQIA 161
              +     FL   K  E   NE++ A
Sbjct: 121 KEVNGNNIIFLIDNKEIEIKFNEIRKA 147


>gi|190575264|ref|YP_001973109.1| hypothetical protein Smlt3391 [Stenotrophomonas maltophilia K279a]
 gi|226703805|sp|B2FN92|RIMP_STRMK RecName: Full=Ribosome maturation factor rimP
 gi|190013186|emb|CAQ46819.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 196

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 20/162 (12%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A DI++++ P +  +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L   ++++L G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFNLEQFARHQGESAKVTLKLPQDNRRRLQGRI 124

Query: 136 MGTSETG----FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             T E      F ++K           ++ +S D++  AR++
Sbjct: 125 EATDEAAGTITFIVDK----------TEVVVSADNIDKARIM 156


>gi|56419794|ref|YP_147112.1| hypothetical protein GK1259 [Geobacillus kaustophilus HTA426]
 gi|81347603|sp|Q5L0J2|RIMP_GEOKA RecName: Full=Ribosome maturation factor rimP
 gi|56379636|dbj|BAD75544.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 157

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P+++EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  LD  
Sbjct: 9   VEQLVTPILDEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGAVSEKLSEKLDEV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++     T  
Sbjct: 68  DPIPHNYFLEVSSPGAERPLKKAKDFAKAIGKNVYIKTYEPIEGEKQFEGELTAFDGTTV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            L  + RG +      +AI ++ + SARL V
Sbjct: 128 TLLVKDRGRQKT----VAIPYEKVASARLAV 154


>gi|261419459|ref|YP_003253141.1| hypothetical protein GYMC61_2043 [Geobacillus sp. Y412MC61]
 gi|319766274|ref|YP_004131775.1| hypothetical protein GYMC52_1166 [Geobacillus sp. Y412MC52]
 gi|261375916|gb|ACX78659.1| protein of unknown function DUF150 [Geobacillus sp. Y412MC61]
 gi|317111140|gb|ADU93632.1| protein of unknown function DUF150 [Geobacillus sp. Y412MC52]
          Length = 157

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P+++EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  LD  
Sbjct: 9   VEQLVTPILDEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGAVSEKLSEKLDEV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++     T  
Sbjct: 68  DPIPYNYFLEVSSPGAERPLKKAKDFAKAIGKNVYIKTYEPIEGEKQFEGELTAFDGTTV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            L  + RG +      +AI ++ + SARL V
Sbjct: 128 TLLVKDRGRQKT----VAIPYEKVASARLAV 154


>gi|259586220|sp|A8F225|RIMP_RICM5 RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 89/160 (55%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVE 83
           I++VI+  + +M F  V + +      +++I ++  +G  +++ DC + S+ IS ILDVE
Sbjct: 8   ITNVIEESLTDMGFELVLVKVKGVNPKVVEILIDSLNGERISVEDCTKASRTISAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+       
Sbjct: 68  DLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAENNKI 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E        E ++ I +D + +A L++T+E+ +  L
Sbjct: 128 YLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLL 159


>gi|332306995|ref|YP_004434846.1| hypothetical protein Glaag_2637 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174324|gb|AEE23578.1| protein of unknown function DUF150 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 152

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 69/121 (57%), Gaps = 2/121 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++   +E + F  V I  +   K+  ++++++  DG +T+  C E+S  +S +
Sbjct: 4   LEQKLTEMLTAPVEALGFEMVGIEFVRAGKHSTMRVYIDHPDG-ITVDHCAEVSHQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP+ +   ++   G VV   + +  GD++   GK++  +
Sbjct: 63  LDVEDPINTEYNLEVSSPGMERPLFKLQHYIDSVGEVVTLRLKMPMGDRRNFKGKLLSEA 122

Query: 140 E 140
           +
Sbjct: 123 D 123


>gi|255524232|ref|ZP_05391191.1| protein of unknown function DUF150 [Clostridium carboxidivorans P7]
 gi|255512057|gb|EET88338.1| protein of unknown function DUF150 [Clostridium carboxidivorans P7]
          Length = 154

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 77/118 (65%), Gaps = 1/118 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +++++++P++ E+++    + L+ E K+  L+I++++++  ++L+DCE++S+A+S +
Sbjct: 6   LIDELTNLVKPIVTELNYDLYYLELVREGKDNYLRIYIDKENEGISLQDCEKVSRAVSEM 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LDV++ I+  Y LEVSSPGI+R +       ++ G+ V   I      K+K  G+++ 
Sbjct: 66  LDVKDPIKEGYYLEVSSPGIERILHTDEHLQKYTGNDVVVNISGLLNGKKKYEGQLVN 123


>gi|260495124|ref|ZP_05815253.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
 gi|260197567|gb|EEW95085.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
          Length = 156

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 4/145 (2%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQA 75
           G+  +   I+ ++ P +EEM+   V +  +++     ++IF+E  +G++++ DC +LS  
Sbjct: 3   GNNQIVEKITEIVNPFVEEMNLSLVDVEYVQDGAYWYIRIFIENLNGDLSIEDCSKLSSK 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I     +E +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I
Sbjct: 63  IED--KIEKLIEHKFFLEVSSPGLERPLKKIEDYIRFTGEKITLHLKHKLDDKKQFKAII 120

Query: 136 MGTS-ETGFFLEKEKRGEKDMNELQ 159
              + +   FL  +K  E   NE++
Sbjct: 121 KEVNGDNIIFLIDKKEIEIKFNEIR 145


>gi|188532502|ref|YP_001906299.1| YhbC-like protein [Erwinia tasmaniensis Et1/99]
 gi|188027544|emb|CAO95391.1| YhbC-like protein [Erwinia tasmaniensis Et1/99]
          Length = 192

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 50  LTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVED 108

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 109 PITVAYNLEVSSPGLDRPMFTAEHYARFTGEEVSLVLRMAVQNRRKWQGII 159


>gi|297530566|ref|YP_003671841.1| hypothetical protein GC56T3_2294 [Geobacillus sp. C56-T3]
 gi|297253818|gb|ADI27264.1| protein of unknown function DUF150 [Geobacillus sp. C56-T3]
          Length = 157

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P+++EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  LD  
Sbjct: 9   VEQLVTPILDEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGAVSEKLSEKLDEV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++     T  
Sbjct: 68  DPIPYNYFLEVSSPGAERPLKKAKDFAKAIGKNVYIKTYEPIEGERQFEGELTAFDGTTV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            L  + RG +      +AI ++ + SARL V
Sbjct: 128 TLLVKDRGRQKT----VAIPYEKVASARLAV 154


>gi|296185353|ref|ZP_06853763.1| hypothetical protein CLCAR_0776 [Clostridium carboxidivorans P7]
 gi|296050187|gb|EFG89611.1| hypothetical protein CLCAR_0776 [Clostridium carboxidivorans P7]
          Length = 155

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 77/118 (65%), Gaps = 1/118 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +++++++P++ E+++    + L+ E K+  L+I++++++  ++L+DCE++S+A+S +
Sbjct: 7   LIDELTNLVKPIVTELNYDLYYLELVREGKDNYLRIYIDKENEGISLQDCEKVSRAVSEM 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LDV++ I+  Y LEVSSPGI+R +       ++ G+ V   I      K+K  G+++ 
Sbjct: 67  LDVKDPIKEGYYLEVSSPGIERILHTDEHLQKYTGNDVVVNISGLLNGKKKYEGQLVN 124


>gi|268601717|ref|ZP_06135884.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|291043425|ref|ZP_06569146.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|268585848|gb|EEZ50524.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|291012661|gb|EFE04646.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 149

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 5/119 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           +G + DI ++++  +  + +      L  +  L  ++F++++ G +T+ DC  +S  +S 
Sbjct: 3   IGSSMDIQTILEKTLPGLGYELADFELAAQGTL--RVFIDKE-GGITVEDCATVSNHLSR 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  VE+I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G
Sbjct: 60  VFMVEDI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEG 116


>gi|237736657|ref|ZP_04567138.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420519|gb|EEO35566.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
          Length = 160

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 3/122 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  ++ PV+ EM    V I  +++     ++I+VE  +G +TL +C  +S  I    DV+
Sbjct: 14  IEKIVTPVVNEMGLSLVDIEYMQDGGYWYVRIYVENLNGEITLEECAAISGKIDE--DVD 71

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +IE  + LEVSSPGI+RP+ +  DF+R+ G  +   +     DK+   G I    +   
Sbjct: 72  KLIEQRFFLEVSSPGIERPLKKIEDFIRFKGEKIKVSLKHKINDKKSFEGIITECKDNII 131

Query: 144 FL 145
           FL
Sbjct: 132 FL 133


>gi|89895267|ref|YP_518754.1| hypothetical protein DSY2521 [Desulfitobacterium hafniense Y51]
 gi|122482374|sp|Q24UI2|RIMP_DESHY RecName: Full=Ribosome maturation factor rimP
 gi|89334715|dbj|BAE84310.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 152

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++I PVI E     V +  ++E  +  L+I+++++ G + + DC  +S  +S +LD  
Sbjct: 9   VEAIIAPVITEQGLELVDVEYVKEGAHWYLRIYIDKE-GGVDIDDCTNVSHLVSEVLDKH 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG++RP+ +  DF R+ G +V      +    ++  G ++G  E   
Sbjct: 68  DPIAQAYMLEVSSPGLERPLKKDEDFERFTGKLVRVLTKEAYQGYKEFTGYLVGLIEDDI 127

Query: 144 FLEKEK 149
            LE EK
Sbjct: 128 VLEYEK 133


>gi|282861438|ref|ZP_06270503.1| protein of unknown function DUF150 [Streptomyces sp. ACTE]
 gi|282564096|gb|EFB69633.1| protein of unknown function DUF150 [Streptomyces sp. ACTE]
          Length = 165

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 11/151 (7%)

Query: 25  ISSVIQPVI--EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +  +++P++  +E+    +++S    + +L ++ V+ DDG + L  C ELS+ IS  LD 
Sbjct: 9   LRGLLEPLVSAKELDLEEIEVSRAGRRRVL-RVIVDSDDG-VELDTCAELSRTISETLDA 66

Query: 83  ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + + EG Y LEVSSPG DRP+     ++R  G +      L+  D  +L+ +I+G  + 
Sbjct: 67  TDAMGEGEYVLEVSSPGADRPLTEHRHYVRATGRLAK----LNLADGGELVARILGVDDE 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G  LE    G K        ++FD +  AR+
Sbjct: 123 GLDLEVP--GVKGRKPTARRVAFDEIAKARV 151


>gi|188996514|ref|YP_001930765.1| protein of unknown function DUF150 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|259645122|sp|B2V8D8|RIMP_SULSY RecName: Full=Ribosome maturation factor rimP
 gi|188931581|gb|ACD66211.1| protein of unknown function DUF150 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 147

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 9/154 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   +  ++ P++EE  F+ V I  +  K  +L+I++   +G  ++ DCE +S+ I  
Sbjct: 1   MKVEEKVKELLLPILEERDFKLVDIEFIPSKRPILRIYIYNPEGT-SIDDCEWVSKRIGA 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE++I+  Y LEVSSPG+DR      ++  + G  V  +      +K+   G ++G 
Sbjct: 60  LLDVEDLIDKAYILEVSSPGLDRKFKNIEEYDIFKGRDVVVKTKEPINEKKVFKGTLLG- 118

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 LE EK   K+ NE  + I F+++   +L
Sbjct: 119 ------LEDEKVKIKE-NEETVEIPFENVSQTKL 145


>gi|327441014|dbj|BAK17379.1| uncharacterized protein [Solibacillus silvestris StLB046]
          Length = 161

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 82/151 (54%), Gaps = 5/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  ++ P++EE+    V I  ++E ++  L+I+V+  +G + +  C ++S+ +S  LD  
Sbjct: 8   IEELVTPIVEELDLELVDIEFVKEGRDWFLRIYVDTPEGGIDILQCAQVSERLSEKLDEN 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + IE +Y LEVSSPG +RP+ ++ DF +  G  +  +      D ++  G +   ++   
Sbjct: 68  DPIEQNYYLEVSSPGAERPLKKQQDFEKAIGKYIYVKTYEPVKDLKEFYGYLRAYTDE-- 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           FLE E R +    ++ + I  + +  ARL +
Sbjct: 126 FLEMEFRIK--TRKVTVQIEKEKIAQARLAI 154


>gi|229061420|ref|ZP_04198765.1| hypothetical protein bcere0026_35060 [Bacillus cereus AH603]
 gi|229134624|ref|ZP_04263434.1| hypothetical protein bcere0014_35330 [Bacillus cereus BDRD-ST196]
 gi|228648885|gb|EEL04910.1| hypothetical protein bcere0014_35330 [Bacillus cereus BDRD-ST196]
 gi|228717843|gb|EEL69491.1| hypothetical protein bcere0026_35060 [Bacillus cereus AH603]
          Length = 164

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 88/166 (53%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VEIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMFE 124

Query: 133 GKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++   G + T     K ++ E       I I  D + +ARL VT
Sbjct: 125 GKLLSYDGNTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 163


>gi|172036757|ref|YP_001803258.1| hypothetical protein cce_1842 [Cyanothece sp. ATCC 51142]
 gi|259585745|sp|B1WZP0|RIMP_CYAA5 RecName: Full=Ribosome maturation factor rimP
 gi|171698211|gb|ACB51192.1| DUF150-containing protein [Cyanothece sp. ATCC 51142]
          Length = 151

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 1/132 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P++EEM    V++     K   +L++ +     + +L DCE++S+A+  +
Sbjct: 5   LIPQIIDLATPIVEEMGLDVVEVVFQTNKRPPVLRVDIRNPASDTSLNDCEQVSRALEAV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+ G Y LE+SSPGI R +  + DF+ + G  V         DK++  G++ G  
Sbjct: 65  LDETAIMPGAYVLEISSPGISRYLNSERDFIAFKGFEVNIATNPPYKDKKEWRGRLQGRD 124

Query: 140 ETGFFLEKEKRG 151
           E   +L ++ R 
Sbjct: 125 EKAVYLNRKGRA 136


>gi|121535259|ref|ZP_01667073.1| protein of unknown function DUF150 [Thermosinus carboxydivorans
           Nor1]
 gi|121306144|gb|EAX47072.1| protein of unknown function DUF150 [Thermosinus carboxydivorans
           Nor1]
          Length = 152

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 9/148 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++Q +I + +   V +  ++E+N  L++F+++  G + + DC+ +S+ +   LD  +
Sbjct: 10  VERLVQDIITDTNMELVDVEYVKERNWYLRVFLDKP-GGIEVEDCQWVSEQLEVKLDELD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I+  Y LEVSSPG+DRP+ +  DF+R  G  V           + ++G + G SET   
Sbjct: 69  PIKESYYLEVSSPGLDRPLKKDRDFIRHIGEKVEVHTFAPLNGSKLVVGTLTGISETDIH 128

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARL 172
           L        D+N   +++  D     +L
Sbjct: 129 L--------DVNGTALSVPRDKTAQVKL 148


>gi|301063518|ref|ZP_07204050.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300442457|gb|EFK06690.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 157

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 64/101 (63%), Gaps = 2/101 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +I ++++PV++EM    V +  +  +   +L+I+ +R  G +TL DC  +S+ I  +
Sbjct: 5   LLKEIEALVEPVLDEMGIELVDLEYVSGQGRQVLRIYADRPTG-ITLDDCAMVSREIGHL 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           LDV ++++  Y LEVSSPG++RP+ R+ DFLR  G  +  +
Sbjct: 64  LDVSDLLKHQYVLEVSSPGLNRPLKREKDFLRVVGQRIKVQ 104


>gi|228992545|ref|ZP_04152472.1| hypothetical protein bpmyx0001_32850 [Bacillus pseudomycoides DSM
           12442]
 gi|228998593|ref|ZP_04158180.1| hypothetical protein bmyco0003_31540 [Bacillus mycoides Rock3-17]
 gi|229006093|ref|ZP_04163781.1| hypothetical protein bmyco0002_30140 [Bacillus mycoides Rock1-4]
 gi|228755169|gb|EEM04526.1| hypothetical protein bmyco0002_30140 [Bacillus mycoides Rock1-4]
 gi|228761061|gb|EEM10020.1| hypothetical protein bmyco0003_31540 [Bacillus mycoides Rock3-17]
 gi|228767179|gb|EEM15815.1| hypothetical protein bpmyx0001_32850 [Bacillus pseudomycoides DSM
           12442]
          Length = 164

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 12/168 (7%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCE 70
           E R+F D  +   + ++ QP++EE++   V +  ++E K+  L++ ++ + G + + +C 
Sbjct: 4   ERRLFMDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVSIDSETG-VDIEECG 62

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++ 
Sbjct: 63  AVSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKM 122

Query: 131 LIGKIM---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             GK++   GT+ T     K ++ E       I I  D + +ARL VT
Sbjct: 123 FEGKLLSYDGTTITLLLTIKTRKKE-------IQIPMDKVANARLAVT 163


>gi|15640661|ref|NP_230290.1| hypothetical protein VC0641 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587845|ref|ZP_01677602.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121728393|ref|ZP_01681421.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673580|ref|YP_001216135.1| hypothetical protein VC0395_A0172 [Vibrio cholerae O395]
 gi|153215845|ref|ZP_01950177.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153801997|ref|ZP_01956583.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153818682|ref|ZP_01971349.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822534|ref|ZP_01975201.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153826540|ref|ZP_01979207.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153829155|ref|ZP_01981822.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227080822|ref|YP_002809373.1| hypothetical protein VCM66_0599 [Vibrio cholerae M66-2]
 gi|229505737|ref|ZP_04395247.1| clustered with transcription termination protein NusA [Vibrio
           cholerae BX 330286]
 gi|229509230|ref|ZP_04398715.1| clustered with transcription termination protein NusA [Vibrio
           cholerae B33]
 gi|229512903|ref|ZP_04402370.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TMA 21]
 gi|229519561|ref|ZP_04409004.1| clustered with transcription termination protein NusA [Vibrio
           cholerae RC9]
 gi|229520932|ref|ZP_04410354.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TM 11079-80]
 gi|229530446|ref|ZP_04419834.1| clustered with transcription termination protein NusA [Vibrio
           cholerae 12129(1)]
 gi|229608848|ref|YP_002879496.1| hypothetical protein VCD_003770 [Vibrio cholerae MJ-1236]
 gi|254292207|ref|ZP_04962975.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254850875|ref|ZP_05240225.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744142|ref|ZP_05418095.1| UPF0090 domain-containing protein [Vibrio cholera CIRS 101]
 gi|262156118|ref|ZP_06029237.1| UPF0090 domain-containing protein [Vibrio cholerae INDRE 91/1]
 gi|262169940|ref|ZP_06037630.1| UPF0090 domain-containing protein [Vibrio cholerae RC27]
 gi|262189772|ref|ZP_06048123.1| UPF0090 domain-containing protein [Vibrio cholerae CT 5369-93]
 gi|298500757|ref|ZP_07010560.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|34223077|sp|Q9KU82|RIMP_VIBCH RecName: Full=Ribosome maturation factor rimP
 gi|172047699|sp|A5F924|RIMP_VIBC3 RecName: Full=Ribosome maturation factor rimP
 gi|254806528|sp|C3LSP6|RIMP_VIBCM RecName: Full=Ribosome maturation factor rimP
 gi|9655077|gb|AAF93807.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547881|gb|EAX57965.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121629327|gb|EAX61759.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124114562|gb|EAY33382.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124122456|gb|EAY41199.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126510762|gb|EAZ73356.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519952|gb|EAZ77175.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315463|gb|ABQ20002.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148875344|gb|EDL73479.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149739720|gb|EDM53927.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150421888|gb|EDN13867.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227008710|gb|ACP04922.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227012466|gb|ACP08676.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229332219|gb|EEN97707.1| clustered with transcription termination protein NusA [Vibrio
           cholerae 12129(1)]
 gi|229342165|gb|EEO07161.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TM 11079-80]
 gi|229344250|gb|EEO09225.1| clustered with transcription termination protein NusA [Vibrio
           cholerae RC9]
 gi|229350152|gb|EEO15105.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TMA 21]
 gi|229353802|gb|EEO18738.1| clustered with transcription termination protein NusA [Vibrio
           cholerae B33]
 gi|229357960|gb|EEO22877.1| clustered with transcription termination protein NusA [Vibrio
           cholerae BX 330286]
 gi|229371503|gb|ACQ61926.1| clustered with transcription termination protein NusA [Vibrio
           cholerae MJ-1236]
 gi|254846580|gb|EET24994.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738082|gb|EET93474.1| UPF0090 domain-containing protein [Vibrio cholera CIRS 101]
 gi|262021674|gb|EEY40385.1| UPF0090 domain-containing protein [Vibrio cholerae RC27]
 gi|262030154|gb|EEY48799.1| UPF0090 domain-containing protein [Vibrio cholerae INDRE 91/1]
 gi|262034349|gb|EEY52738.1| UPF0090 domain-containing protein [Vibrio cholerae CT 5369-93]
 gi|297540538|gb|EFH76596.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327483443|gb|AEA77850.1| hypothetical protein VCLMA_A0562 [Vibrio cholerae LMA3894-4]
          Length = 151

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G +T+ DC E+S+ +S +LDVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHENG-ITVEDCAEVSRQVSAVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 96  IGHEVSIVLKMAVGNRRKWKGVI 118


>gi|49610183|emb|CAG73625.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 140

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 1/107 (0%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+ I  
Sbjct: 2   ISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVEDPITV 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            Y LEVSSPG++RP+   + +L + G  VA  + ++  +++K +G I
Sbjct: 61  AYNLEVSSPGLERPLFTAAHYLHFVGEEVAVVLRMAVQNRRKWLGVI 107


>gi|259585819|sp|B2VGS4|RIMP_ERWT9 RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYARFTGEEVSLVLRMAVQNRRKWQGII 119


>gi|238755154|ref|ZP_04616500.1| hypothetical protein yruck0001_25670 [Yersinia ruckeri ATCC 29473]
 gi|238706601|gb|EEP98972.1| hypothetical protein yruck0001_25670 [Yersinia ruckeri ATCC 29473]
          Length = 152

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYARYLGETVILVLRMAMQNRRKWQGII 119


>gi|304310505|ref|YP_003810103.1| Protein of unknown function DUF150 [gamma proteobacterium HdN1]
 gi|301796238|emb|CBL44446.1| Protein of unknown function DUF150 [gamma proteobacterium HdN1]
          Length = 154

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L++F++ ++G +T+ DCE +S  +S +LDVE+ + G Y LEVSSPG+DRP+     
Sbjct: 35  KHSVLRLFIDSENG-VTIDDCERVSHQVSAVLDVEDPVSGEYHLEVSSPGMDRPLFGAEQ 93

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             R+    +   + ++   K+  +GK++  SE
Sbjct: 94  LGRYIHCEIKVRLKMAVDGKRNFVGKLLAVSE 125


>gi|149189796|ref|ZP_01868077.1| hypothetical protein VSAK1_11003 [Vibrio shilonii AK1]
 gi|148836445|gb|EDL53401.1| hypothetical protein VSAK1_11003 [Vibrio shilonii AK1]
          Length = 151

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 73/117 (62%), Gaps = 2/117 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   ++ +++  +E + +  V +  +   ++  L+I+++ +DG +T+  C E+S  +S 
Sbjct: 3   GLERQLTELLEAPVEALGYELVGLEFIRAGEHSTLRIYIDHEDG-ITVDACAEVSHQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I
Sbjct: 62  VMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGTI 118


>gi|288817342|ref|YP_003431689.1| hypothetical protein HTH_0021 [Hydrogenobacter thermophilus TK-6]
 gi|288786741|dbj|BAI68488.1| hypothetical protein HTH_0021 [Hydrogenobacter thermophilus TK-6]
 gi|308750949|gb|ADO44432.1| protein of unknown function DUF150 [Hydrogenobacter thermophilus
           TK-6]
          Length = 157

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  + +P+I+ + F+   +    E+  +L++ +++D G +T+ DCEE+S+ +S +LDVE+
Sbjct: 12  VRQLAEPIIKNLGFKLFDVEFKPERGWVLRVILDKD-GGITVNDCEEVSKRLSALLDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           II   Y LEVSSPG+ R + +   +  + G ++   +  +   K++L G I+   E
Sbjct: 71  IIPTSYILEVSSPGLTRELTKPEHYEFFKGRLIRLVLREALEGKRELKGYIVDVKE 126


>gi|221134837|ref|ZP_03561140.1| hypothetical protein GHTCC_07897 [Glaciecola sp. HTCC2999]
          Length = 165

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++ P  E + F  V +  +   K+ +L++F++  DG +++  C ++SQ  S I
Sbjct: 17  LEKKLTEMLTPAAESLGFEMVGVEFVRAGKHSILRVFIDHPDG-ISVDHCADVSQQASAI 75

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+ + + +    G +VA  + +   +++   G ++   
Sbjct: 76  LDVEDPINTEYNLEVSSPGMDRPLFKTAHYEAIVGEMVAVRLRMPMNERRNFKGTLLSCE 135

Query: 140 ETGFFLE 146
                +E
Sbjct: 136 NDNIVVE 142


>gi|226946309|ref|YP_002801382.1| hypothetical protein Avin_42840 [Azotobacter vinelandii DJ]
 gi|259585700|sp|C1DFL1|RIMP_AZOVD RecName: Full=Ribosome maturation factor rimP
 gi|226721236|gb|ACO80407.1| Conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 145

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + +    I  L + ++ LL+++++  DG + + DCE++S+ IS +LDVE
Sbjct: 1   MQALLAPVVEALGYECWGIEFLSQGRHSLLRVYIDHADG-ILIDDCEKVSRQISGVLDVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I   Y LEVSSPG+DRP+     F+R  G  V
Sbjct: 60  DPISSEYTLEVSSPGMDRPLFTLEQFVRCAGEQV 93


>gi|229525294|ref|ZP_04414699.1| clustered with transcription termination protein NusA [Vibrio
           cholerae bv. albensis VL426]
 gi|229338875|gb|EEO03892.1| clustered with transcription termination protein NusA [Vibrio
           cholerae bv. albensis VL426]
          Length = 151

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G +T+ DC E+S+ +S +LDVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHENG-ITVEDCAEVSRQVSAVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 96  IGHEVSIVLKMAVGNRRKWKGII 118


>gi|300113655|ref|YP_003760230.1| hypothetical protein Nwat_0966 [Nitrosococcus watsonii C-113]
 gi|299539592|gb|ADJ27909.1| protein of unknown function DUF150 [Nitrosococcus watsonii C-113]
          Length = 151

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 5/102 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE--KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           IS ++ PV+  + +  V +  L    K +LL+I+++   G +T+ DCE  S  IS +LDV
Sbjct: 7   ISKLVGPVVAALGYELVGVERLSSVGKGVLLRIYIDAPSG-VTVNDCERTSHQISALLDV 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           E  +   Y LE+SSPG+DRP+  +  F R+ G  V   I LS
Sbjct: 66  EEPMASAYTLEISSPGLDRPLFTEEHFKRFTG--VEASITLS 105


>gi|331007795|ref|ZP_08330908.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC1989]
 gi|330418394|gb|EGG92947.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC1989]
          Length = 163

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 12/137 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVER-------DD----GNMTLRDCEEL 72
           ++++I+PV+E +  +   +  L++ +   L+I++E+       DD      + L DCE++
Sbjct: 8   LTALIEPVVESLGCQLWGLEYLVQGRQATLRIYIEKAADSESSDDTKKESGVGLHDCEKV 67

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S +LDVE+ I  HY LEVSSPG+DRP+   + +    G  V+ ++     D++  I
Sbjct: 68  SRQVSSVLDVEDPISSHYTLEVSSPGMDRPLFLLAHYHSSVGEKVSIKLSRKFDDRKNFI 127

Query: 133 GKIMGTSETGFFLEKEK 149
           G I G  +    L  E+
Sbjct: 128 GVIAGVEDDEVILRVEE 144


>gi|240116050|ref|ZP_04730112.1| hypothetical protein NgonPID1_07356 [Neisseria gonorrhoeae PID18]
 gi|260440136|ref|ZP_05793952.1| hypothetical protein NgonDG_03444 [Neisseria gonorrhoeae DGI2]
          Length = 143

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +      L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELADFELAAQGTL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G
Sbjct: 59  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEG 110


>gi|254302279|ref|ZP_04969637.1| hypothetical protein FNP_2331 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322471|gb|EDK87721.1| hypothetical protein FNP_2331 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 156

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 4/139 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ +I P IEEM    V +  +++     ++IF+E  +G++ + DC +LS  I     VE
Sbjct: 11  ITKIINPFIEEMGLSLVDVEYVQDGGYWYVRIFIENLNGDLNIEDCSKLSSKIED--KVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS-ETG 142
            +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I   + +  
Sbjct: 69  ELIEHKFFLEVSSPGLERPLKKLEDYIRFTGEKITLHLKHKLDDKKQFKAIIKEVNGDNI 128

Query: 143 FFLEKEKRGEKDMNELQIA 161
            FL  +K  E   NE++ A
Sbjct: 129 IFLIDKKEIEIKFNEIRKA 147


>gi|288940249|ref|YP_003442489.1| hypothetical protein Alvin_0500 [Allochromatium vinosum DSM 180]
 gi|288895621|gb|ADC61457.1| protein of unknown function DUF150 [Allochromatium vinosum DSM 180]
          Length = 151

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)

Query: 32  VIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           V+E + +  V +   ++     L+++++ + G +TL DC  +S  +S +LDVE+ I   Y
Sbjct: 15  VVEPLGYELVGVEYFQKGGGATLRVYIDHERG-ITLDDCTAVSHQLSGVLDVEDPISDQY 73

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            LEVSSPG+DRP+V    F R+ G  V   +      ++KL G ++G    G  L  ++R
Sbjct: 74  DLEVSSPGLDRPLVFPEHFERFAGSRVRIRLSEKIEGRRKLEGVLLGVVPGGVALRADER 133

Query: 151 GEKDMNELQIAISFDSLLSARLI 173
                      I   S+ SARLI
Sbjct: 134 --------DWEIPLTSIDSARLI 148


>gi|238750124|ref|ZP_04611627.1| hypothetical protein yrohd0001_7050 [Yersinia rohdei ATCC 43380]
 gi|238761766|ref|ZP_04622740.1| hypothetical protein ykris0001_12910 [Yersinia kristensenii ATCC
           33638]
 gi|332160077|ref|YP_004296654.1| hypothetical protein YE105_C0453 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|167012934|sp|A1JIW7|RIMP_YERE8 RecName: Full=Ribosome maturation factor rimP
 gi|122087772|emb|CAL10558.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238699880|gb|EEP92623.1| hypothetical protein ykris0001_12910 [Yersinia kristensenii ATCC
           33638]
 gi|238711668|gb|EEQ03883.1| hypothetical protein yrohd0001_7050 [Yersinia rohdei ATCC 43380]
 gi|325664307|gb|ADZ40951.1| hypothetical protein YE105_C0453 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 152

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG++RPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLERPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 119


>gi|29654725|ref|NP_820417.1| hypothetical cytosolic protein [Coxiella burnetii RSA 493]
 gi|161830413|ref|YP_001597278.1| hypothetical protein COXBURSA331_A1602 [Coxiella burnetii RSA 331]
 gi|34223106|sp|Q83BR9|RIMP_COXBU RecName: Full=Ribosome maturation factor rimP
 gi|189038961|sp|A9N8V8|RIMP_COXBR RecName: Full=Ribosome maturation factor rimP
 gi|29541993|gb|AAO90931.1| hypothetical cytosolic protein [Coxiella burnetii RSA 493]
 gi|161762280|gb|ABX77922.1| conserved hypothetical protein [Coxiella burnetii RSA 331]
          Length = 153

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V   L       +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATTILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGN 97


>gi|169342738|ref|ZP_02863778.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
 gi|169299244|gb|EDS81314.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
          Length = 170

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 1/129 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+ ++  P+++E  +    I  ++E N   L++++E+ +  ++LRDCE +S+A+S +
Sbjct: 22  LVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSRALSDM 81

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E+ I+  Y LEVSSPG++R +     F R+ G  V      S   ++ + G +    
Sbjct: 82  LDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEVFVGFKSSLSGRKNVKGILKDVQ 141

Query: 140 ETGFFLEKE 148
           E    +E E
Sbjct: 142 ENEIIVECE 150


>gi|109898013|ref|YP_661268.1| hypothetical protein Patl_1693 [Pseudoalteromonas atlantica T6c]
 gi|122972050|sp|Q15V74|RIMP_PSEA6 RecName: Full=Ribosome maturation factor rimP
 gi|109700294|gb|ABG40214.1| protein of unknown function DUF150 [Pseudoalteromonas atlantica
           T6c]
          Length = 152

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 69/121 (57%), Gaps = 2/121 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++   +E + F  V I  +   K+  ++++++  DG +++  C E+S  +S +
Sbjct: 4   LEQKLTEMLTAPVEALGFEMVGIEFVRAGKHSTMRVYIDHPDG-ISVDHCAEVSHQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP+ +   ++   G VV   + +  GD++   GK++  +
Sbjct: 63  LDVEDPINTEYNLEVSSPGMERPLFKLQHYIESVGEVVTLRLKMPMGDRRNFKGKLLSEA 122

Query: 140 E 140
           +
Sbjct: 123 D 123


>gi|256846937|ref|ZP_05552391.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|294784278|ref|ZP_06749573.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
 gi|256717735|gb|EEU31294.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|294488144|gb|EFG35495.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
          Length = 156

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 4/139 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I     VE
Sbjct: 11  ITKIVNPFIEEMNLSLVDVEYVQDGGYWYIRIFIENLNGDLNIEDCSKLSSKIED--KVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS-ETG 142
            +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I   + +  
Sbjct: 69  GLIEHKFFLEVSSPGLERPLKKIEDYVRFTGEKITLHLKHKLDDKKQFKAIIKEVNGDNI 128

Query: 143 FFLEKEKRGEKDMNELQIA 161
            FL  +K  E   NE++ A
Sbjct: 129 IFLIDKKEIEIKFNEIRKA 147


>gi|220934177|ref|YP_002513076.1| protein of unknown function DUF150 [Thioalkalivibrio sp. HL-EbGR7]
 gi|259645128|sp|B8GP00|RIMP_THISH RecName: Full=Ribosome maturation factor rimP
 gi|219995487|gb|ACL72089.1| protein of unknown function DUF150 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 154

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 71/127 (55%), Gaps = 2/127 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++++P++  M ++   +   + + + LL++F++ + G +TL DC E+S+ +S ++DVE
Sbjct: 3   LKALLEPLVTRMGYQLWGMEFRVAKHSALLRLFIDSEQG-ITLDDCTEVSRQVSALMDVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+  Y LEVSSPG+DRP+     + R+ G  V          ++   G I+   E   
Sbjct: 62  DPIQVPYTLEVSSPGVDRPLFEAGQYARYVGEQVRVRTQWPIDGQRNFAGAIVSADEDSV 121

Query: 144 FLEKEKR 150
            L+ + R
Sbjct: 122 TLDVDGR 128


>gi|212212196|ref|YP_002303132.1| hypothetical protein CbuG_0575 [Coxiella burnetii CbuG_Q212]
 gi|226707750|sp|B6IZ59|RIMP_COXB2 RecName: Full=Ribosome maturation factor rimP
 gi|212010606|gb|ACJ17987.1| hypothetical cytosolic protein [Coxiella burnetii CbuG_Q212]
          Length = 153

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V   L       +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATTILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGN 97


>gi|259585813|sp|Q2SML5|RIMP_HAHCH RecName: Full=Ribosome maturation factor rimP
          Length = 150

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M    D+  +++PV+E M      +  + + K  LL+I+++++ G + + DCE++S+ IS
Sbjct: 1   MARKDDLYQLLKPVVEGMGCDFWGMDYIAQGKRSLLRIYIDKESG-VLVDDCEKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            ILDVE+ I+G Y LEVSSPG DRP+     +  + G ++   +      ++K  G
Sbjct: 60  AILDVEDPIKGEYTLEVSSPGWDRPLFNVEQYKAYIGSIIEVRLQAPFNGRRKFKG 115


>gi|153207258|ref|ZP_01946022.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165918794|ref|ZP_02218880.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
 gi|212218227|ref|YP_002305014.1| hypothetical protein CbuK_0601 [Coxiella burnetii CbuK_Q154]
 gi|226707776|sp|B6J6A9|RIMP_COXB1 RecName: Full=Ribosome maturation factor rimP
 gi|120576746|gb|EAX33370.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165917518|gb|EDR36122.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
 gi|212012489|gb|ACJ19869.1| hypothetical cytosolic protein [Coxiella burnetii CbuK_Q154]
          Length = 153

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V   L       +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATTILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGN 97


>gi|254038336|ref|ZP_04872394.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|293449506|ref|ZP_06663927.1| hypothetical protein ECCG_02538 [Escherichia coli B088]
 gi|226839960|gb|EEH71981.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|291322596|gb|EFE62025.1| hypothetical protein ECCG_02538 [Escherichia coli B088]
          Length = 163

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 21  LTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 79

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 80  PITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 130


>gi|91208368|sp|Q3SKW9|RIMP_THIDA RecName: Full=Ribosome maturation factor rimP
          Length = 142

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 73/115 (63%), Gaps = 7/115 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           D+ + ++PV+  + +   ++ +LE     LL+IF+++  G +T+ DC  +S  ++ +  V
Sbjct: 3   DLPARLEPVLAGLGY---ELVMLERAGRGLLRIFIDKP-GGVTIDDCVAVSNHLTHLFTV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           ENI   + RLEVSSPG+DRP+V+  D+ R+ G  V  ++ +   ++++L G+++G
Sbjct: 59  ENI--DYDRLEVSSPGLDRPLVKPQDYARFAGEQVTLKLRVPMDNRRRLSGQLLG 111


>gi|284048696|ref|YP_003399035.1| protein of unknown function DUF150 [Acidaminococcus fermentans DSM
           20731]
 gi|283952917|gb|ADB47720.1| protein of unknown function DUF150 [Acidaminococcus fermentans DSM
           20731]
          Length = 153

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +  P++EE     V +  + E++  L++F+++  G + + DC  +S A++  LD E+
Sbjct: 10  VTDLAAPIVEEAGLELVDVEYVRERDWFLRVFIDKA-GGIDIDDCSAVSNALAKKLDEED 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I+  Y LEVSSPGIDRP+ +  D     G  V          K++L   +         
Sbjct: 69  FIKEKYYLEVSSPGIDRPLKKDKDLEAHYGQKVDLAFFAPYEGKKQLTAVLKSHDAEKLV 128

Query: 145 LEKEKR 150
           LE  K+
Sbjct: 129 LEDAKK 134


>gi|191172206|ref|ZP_03033749.1| conserved hypothetical protein [Escherichia coli F11]
 gi|194433780|ref|ZP_03066055.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|227887893|ref|ZP_04005698.1| UPF0090 protein yhbC [Escherichia coli 83972]
 gi|238902274|ref|YP_002928070.1| hypothetical protein BWG_2874 [Escherichia coli BW2952]
 gi|291284546|ref|YP_003501364.1| hypothetical protein G2583_3895 [Escherichia coli O55:H7 str.
           CB9615]
 gi|331659459|ref|ZP_08360401.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331664784|ref|ZP_08365689.1| putative cytoplasmic protein [Escherichia coli TA143]
 gi|331669999|ref|ZP_08370844.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331684819|ref|ZP_08385411.1| putative cytoplasmic protein [Escherichia coli H299]
 gi|67476527|sp|P0A8A9|RIMP_ECOL6 RecName: Full=Ribosome maturation factor rimP
 gi|67476528|sp|P0A8B0|RIMP_ECO57 RecName: Full=Ribosome maturation factor rimP
 gi|67476531|sp|P0A8B1|RIMP_SHIFL RecName: Full=Ribosome maturation factor rimP
 gi|91208385|sp|Q32BG3|RIMP_SHIDS RecName: Full=Ribosome maturation factor rimP
 gi|91208386|sp|Q3YX71|RIMP_SHISS RecName: Full=Ribosome maturation factor rimP
 gi|166979883|sp|A1AG75|RIMP_ECOK1 RecName: Full=Ribosome maturation factor rimP
 gi|259585759|sp|C4ZSR1|RIMP_ECOBW RecName: Full=Ribosome maturation factor rimP
 gi|259585820|sp|B6I1P5|RIMP_ECOSE RecName: Full=Ribosome maturation factor rimP
 gi|259585821|sp|B1LFS2|RIMP_ECOSM RecName: Full=Ribosome maturation factor rimP
 gi|259585822|sp|Q1R6G7|RIMP_ECOUT RecName: Full=Ribosome maturation factor rimP
 gi|259585823|sp|B5YS60|RIMP_ECO5E RecName: Full=Ribosome maturation factor rimP
 gi|259585825|sp|B1IQV1|RIMP_ECOLC RecName: Full=Ribosome maturation factor rimP
 gi|259585826|sp|B7UJ65|RIMP_ECO27 RecName: Full=Ribosome maturation factor rimP
 gi|12517781|gb|AAG58306.1|AE005545_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|606110|gb|AAA57973.1| gtg start; differences from database entry [Escherichia coli str.
           K-12 substr. MG1655]
 gi|13363524|dbj|BAB37474.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|30042769|gb|AAP18492.1| hypothetical protein S3428 [Shigella flexneri 2a str. 2457T]
 gi|56383831|gb|AAN44678.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|73857184|gb|AAZ89891.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81242632|gb|ABB63342.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|115514590|gb|ABJ02665.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|190907516|gb|EDV67112.1| conserved hypothetical protein [Escherichia coli F11]
 gi|194418043|gb|EDX34137.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|209758318|gb|ACI77471.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758320|gb|ACI77472.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758322|gb|ACI77473.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758324|gb|ACI77474.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758326|gb|ACI77475.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|222034889|emb|CAP77632.1| UPF0090 protein yhbC [Escherichia coli LF82]
 gi|227835289|gb|EEJ45755.1| UPF0090 protein yhbC [Escherichia coli 83972]
 gi|238860383|gb|ACR62381.1| conserved protein [Escherichia coli BW2952]
 gi|281602554|gb|ADA75538.1| hypothetical protein SFxv_3524 [Shigella flexneri 2002017]
 gi|290764419|gb|ADD58380.1| hypothetical protein G2583_3895 [Escherichia coli O55:H7 str.
           CB9615]
 gi|323936134|gb|EGB32428.1| yhbC protein [Escherichia coli E1520]
 gi|323941728|gb|EGB37907.1| yhbC [Escherichia coli E482]
 gi|323946974|gb|EGB42990.1| yhbC protein [Escherichia coli H120]
 gi|323951310|gb|EGB47185.1| yhbC [Escherichia coli H252]
 gi|323957681|gb|EGB53395.1| yhbC [Escherichia coli H263]
 gi|323961058|gb|EGB56673.1| yhbC [Escherichia coli H489]
 gi|323966352|gb|EGB61786.1| yhbC [Escherichia coli M863]
 gi|323970265|gb|EGB65536.1| yhbC [Escherichia coli TA007]
 gi|323979111|gb|EGB74189.1| yhbC [Escherichia coli TW10509]
 gi|324115224|gb|EGC09188.1| yhbC [Escherichia fergusonii B253]
 gi|324119537|gb|EGC13419.1| yhbC [Escherichia coli E1167]
 gi|325498753|gb|EGC96612.1| hypothetical protein ECD227_2850 [Escherichia fergusonii ECD227]
 gi|331054041|gb|EGI26070.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331058032|gb|EGI30014.1| putative cytoplasmic protein [Escherichia coli TA143]
 gi|331062912|gb|EGI34826.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331078434|gb|EGI49640.1| putative cytoplasmic protein [Escherichia coli H299]
          Length = 152

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 119


>gi|33152525|ref|NP_873878.1| hypothetical protein HD1463 [Haemophilus ducreyi 35000HP]
 gi|51316788|sp|Q7VLI0|RIMP_HAEDU RecName: Full=Ribosome maturation factor rimP
 gi|33148748|gb|AAP96267.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 154

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +I   IE M +  V +        L ++++++++ G +T+ DC ++S+ +S I DVE
Sbjct: 8   LTVLISDTIESMGYELVGVECQHAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAIFDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+        
Sbjct: 67  DPISDKYNLEVSSPGLDRPLFTLAHYARFVGREMVIHLRIPMFDRRKWQGKLTKVDGDLI 126

Query: 144 FLEKEKRGE 152
            LE E  GE
Sbjct: 127 SLEIENNGE 135


>gi|229576801|ref|YP_001004802.2| hypothetical protein YE0432 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318607363|emb|CBY28861.1| clustered with transcription termination protein NusA [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|330862030|emb|CBX72197.1| UPF0090 protein YE0432 [Yersinia enterocolitica W22703]
          Length = 150

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  +S +LDVE+
Sbjct: 8   LTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++RPM     + R+ G  V   + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLERPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 117


>gi|226940849|ref|YP_002795923.1| hypothetical protein LHK_01930 [Laribacter hongkongensis HLHK9]
 gi|254800662|sp|C1D8X4|RIMP_LARHH RecName: Full=Ribosome maturation factor rimP
 gi|226715776|gb|ACO74914.1| Uncharacterized protein conserved in bacteria [Laribacter
           hongkongensis HLHK9]
          Length = 141

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 83/149 (55%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+ ++++  +  + +  V   L      L+++F++   G + L DC ++S  ++ +  VE
Sbjct: 2   DVRTLLETTLSGLGYELVDFEL--GHGGLMRVFIDAPAG-IALDDCVKVSNHLTRLFTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ R++D+ R+ G  V  +  L  G+++K  G ++G +    
Sbjct: 59  NI--DYDRLEVSSPGLDRPLTREADYARFAGERVRIKTRLPIGERKKFAGTLVGLA---- 112

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
               + + E D++  ++AI   S+  ARL
Sbjct: 113 ----DGQVELDIDGERVAIPLASIDKARL 137


>gi|262274885|ref|ZP_06052696.1| UPF0090 domain-containing protein [Grimontia hollisae CIP 101886]
 gi|262221448|gb|EEY72762.1| UPF0090 domain-containing protein [Grimontia hollisae CIP 101886]
          Length = 151

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 74/118 (62%), Gaps = 2/118 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   + ++++  ++ + +  V +  +   ++  L+I+++ ++G +T+ DC E+S+ +S 
Sbjct: 3   GLEKQLLALLEAPVKALDYELVGLEFVRAGQHSTLRIYIDHENG-ITVEDCAEVSRQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           ++DVE+ I   Y LEVSSPG++RP+ +   + R+ GH V   + ++  +++K  G+I+
Sbjct: 62  VMDVEDPITVAYNLEVSSPGLERPLFKAEHYQRFVGHEVTIVLKMAMQNRRKWKGEIL 119


>gi|259585827|sp|A8AQ61|RIMP_CITK8 RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYARFLGEEVTLVLRMAVQNRRKWQGVI 119


>gi|225572727|ref|ZP_03781482.1| hypothetical protein RUMHYD_00916 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039900|gb|EEG50146.1| hypothetical protein RUMHYD_00916 [Blautia hydrogenotrophica DSM
           10507]
          Length = 155

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 75/136 (55%), Gaps = 2/136 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I P++E   F  V +  ++E  N  L+++++++ G +T+ DCE +S+A S +LD  + I
Sbjct: 14  MILPLVEAQRFELVDVEYVKEAGNWYLRVYIDKE-GGITVDDCELISRAFSDLLDEADFI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           E  Y LEVSSPG+ RP+ ++ D+ R  G  +          +++  G ++        +E
Sbjct: 73  EDSYILEVSSPGLGRPLKKEKDYARSMGKELEIRTYRPIDKQKEFYGILLAYDNNSVTIE 132

Query: 147 KEKRGEKDMNELQIAI 162
           ++ +  +   + +IA+
Sbjct: 133 EQDKTRRTFEKKEIAL 148


>gi|253686984|ref|YP_003016174.1| hypothetical protein PC1_0583 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753562|gb|ACT11638.1| protein of unknown function DUF150 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 191

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+
Sbjct: 49  LTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVED 107

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I
Sbjct: 108 PITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVI 158


>gi|290454910|emb|CBJ57168.1| YhbC-like protein [Pectobacterium carotovorum]
          Length = 152

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+
Sbjct: 10  LTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVED 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I
Sbjct: 69  PITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVI 119


>gi|227112573|ref|ZP_03826229.1| hypothetical protein PcarbP_06402 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227327825|ref|ZP_03831849.1| hypothetical protein PcarcW_11031 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 150

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+
Sbjct: 8   LTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I
Sbjct: 67  PITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVI 117


>gi|325290364|ref|YP_004266545.1| Ribosome maturation factor rimP [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965765|gb|ADY56544.1| Ribosome maturation factor rimP [Syntrophobotulus glycolicus DSM
           8271]
          Length = 152

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++P+ EE+    V +  ++E  +  L++++++D G + + DC  +S  +S ILD +
Sbjct: 9   VWQIVEPITEELKLELVDVEYVKEGAHWYLRVYIDKD-GGVDIDDCASVSHQLSNILDSK 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           N+I   Y LEVSSPGI+RP+ ++ D+ ++ G +V
Sbjct: 68  NLIPQAYMLEVSSPGIERPLSKREDYDKYIGKLV 101


>gi|27362892|gb|AAN86998.1| YhbC-like protein [Pectobacterium carotovorum subsp. carotovorum]
          Length = 191

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+
Sbjct: 49  LTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVED 107

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I
Sbjct: 108 PITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVI 158


>gi|323162864|gb|EFZ48699.1| hypothetical protein ECE128010_0824 [Escherichia coli E128010]
          Length = 150

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 8   LTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKCQGVI 117


>gi|308189111|ref|YP_003933242.1| UPF0090 protein yhbC [Pantoea vagans C9-1]
 gi|308059621|gb|ADO11793.1| UPF0090 protein yhbC [Pantoea vagans C9-1]
          Length = 150

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 1/115 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + +  V I  +  +  +L+I+++ +DG + + DC ++S  +S ++
Sbjct: 4   LEQKLTELVSAPVEALGYELVGIEFVRSRTSILRIYIDSEDG-INVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I
Sbjct: 63  DVEDPITVPYNLEVSSPGLDRPLFTAEHYTRFMGEEVSLVLRMAVQNRRKWQGTI 117


>gi|18310672|ref|NP_562606.1| hypothetical protein CPE1690 [Clostridium perfringens str. 13]
 gi|110799296|ref|YP_696377.1| hypothetical protein CPF_1944 [Clostridium perfringens ATCC 13124]
 gi|168211422|ref|ZP_02637047.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|168214477|ref|ZP_02640102.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
 gi|168216977|ref|ZP_02642602.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
 gi|182626379|ref|ZP_02954133.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|34223128|sp|Q8XJR4|RIMP_CLOPE RecName: Full=Ribosome maturation factor rimP
 gi|122958819|sp|Q0TPR3|RIMP_CLOP1 RecName: Full=Ribosome maturation factor rimP
 gi|18145353|dbj|BAB81396.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|110673943|gb|ABG82930.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
 gi|170710586|gb|EDT22768.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|170714055|gb|EDT26237.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
 gi|177908330|gb|EDT70878.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|182380875|gb|EDT78354.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
          Length = 154

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 1/129 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+ ++  P+++E  +    I  ++E N   L++++E+ +  ++LRDCE +S+A+S +
Sbjct: 6   LVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSRALSDM 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E+ I+  Y LEVSSPG++R +     F R+ G  V      S   ++ + G +    
Sbjct: 66  LDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEVFVGFKSSLSGRKNVKGILKDVQ 125

Query: 140 ETGFFLEKE 148
           E    +E E
Sbjct: 126 ENEIIVECE 134


>gi|71901434|ref|ZP_00683524.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
 gi|71728805|gb|EAO30946.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
          Length = 216

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    LL     +L+++++     + +  +++ DCE +S+ +S
Sbjct: 24  EIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 83

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 84  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 143

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 144 VEQVGGFVVLL------VNGVELAVDFNNIDKARIV 173


>gi|323141192|ref|ZP_08076093.1| hypothetical protein HMPREF9443_00865 [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414335|gb|EFY05153.1| hypothetical protein HMPREF9443_00865 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 187

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I++++ P++++     V +  + EK+  L+IF+++  G + + DC+ +S+ ++ ILD E+
Sbjct: 39  ITAMVDPLLQDTGLTLVDVEYVREKDWYLRIFLDKP-GGVEIDDCQMVSEKLTEILDAED 97

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDF 109
            I   Y LEVSSPGIDRP+ +  DF
Sbjct: 98  PIPDKYFLEVSSPGIDRPLKKDKDF 122


>gi|91212592|ref|YP_542578.1| hypothetical protein UTI89_C3601 [Escherichia coli UTI89]
 gi|170680823|ref|YP_001745444.1| hypothetical protein EcSMS35_3466 [Escherichia coli SMS-3-5]
 gi|187775784|ref|ZP_02798170.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188024835|ref|ZP_02774257.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189010333|ref|ZP_02806320.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189401946|ref|ZP_02779158.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189403296|ref|ZP_02794595.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189404085|ref|ZP_02787144.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189404788|ref|ZP_02811062.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189405548|ref|ZP_02822778.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|191168030|ref|ZP_03029830.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|193062091|ref|ZP_03043187.1| conserved hypothetical protein [Escherichia coli E22]
 gi|193067407|ref|ZP_03048375.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194430231|ref|ZP_03062729.1| conserved hypothetical protein [Escherichia coli B171]
 gi|194438776|ref|ZP_03070862.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|208808473|ref|ZP_03250810.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812353|ref|ZP_03253682.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820794|ref|ZP_03261114.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400717|ref|YP_002272641.1| hypothetical protein ECH74115_4491 [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327331|ref|ZP_03443414.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|237706077|ref|ZP_04536558.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|293406781|ref|ZP_06650707.1| hypothetical protein ECGG_02091 [Escherichia coli FVEC1412]
 gi|298382522|ref|ZP_06992119.1| hypothetical protein ECFG_02283 [Escherichia coli FVEC1302]
 gi|331643870|ref|ZP_08345001.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331648971|ref|ZP_08350059.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331654776|ref|ZP_08355776.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331674708|ref|ZP_08375467.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|331679251|ref|ZP_08379923.1| putative cytoplasmic protein [Escherichia coli H591]
 gi|332279999|ref|ZP_08392412.1| conserved hypothetical protein [Shigella sp. D9]
 gi|26110182|gb|AAN82368.1|AE016767_128 Hypothetical protein yhbC [Escherichia coli CFT073]
 gi|91074166|gb|ABE09047.1| conserved hypothetical protein [Escherichia coli UTI89]
 gi|170518541|gb|ACB16719.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
 gi|187770840|gb|EDU34684.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016402|gb|EDU54524.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001090|gb|EDU70076.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358736|gb|EDU77155.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361416|gb|EDU79835.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189367607|gb|EDU86023.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374130|gb|EDU92546.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189379725|gb|EDU98141.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|190901899|gb|EDV61648.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|192932311|gb|EDV84909.1| conserved hypothetical protein [Escherichia coli E22]
 gi|192959364|gb|EDV89799.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194411732|gb|EDX28056.1| conserved hypothetical protein [Escherichia coli B171]
 gi|194422248|gb|EDX38249.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|208728274|gb|EDZ77875.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733630|gb|EDZ82317.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740917|gb|EDZ88599.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209162117|gb|ACI39550.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217319698|gb|EEC28123.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|226899117|gb|EEH85376.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|291426787|gb|EFE99819.1| hypothetical protein ECGG_02091 [Escherichia coli FVEC1412]
 gi|298277662|gb|EFI19178.1| hypothetical protein ECFG_02283 [Escherichia coli FVEC1302]
 gi|323376934|gb|ADX49202.1| protein of unknown function DUF150 [Escherichia coli KO11]
 gi|331037341|gb|EGI09565.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331042718|gb|EGI14860.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331048158|gb|EGI20235.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331068147|gb|EGI39543.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|331073316|gb|EGI44639.1| putative cytoplasmic protein [Escherichia coli H591]
 gi|332102351|gb|EGJ05697.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 154

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 12  LTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 71  PITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 121


>gi|28198120|ref|NP_778434.1| hypothetical protein PD0192 [Xylella fastidiosa Temecula1]
 gi|28056180|gb|AAO28083.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
          Length = 216

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    LL     +L+++++     + +  +++ DCE +S+ +S
Sbjct: 24  EIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 83

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 84  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 143

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 144 VEQVGGFVVLL------VNGVELAVDFNNIDKARIV 173


>gi|148244224|ref|YP_001218918.1| hypothetical protein COSY_0057 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166919105|sp|A5CXX4|RIMP_VESOH RecName: Full=Ribosome maturation factor rimP
 gi|146326051|dbj|BAF61194.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 153

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 2/117 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ +I+PVIE M +  + I  +   K  +L+IF++ +  ++++ DCE +S+ +S I D+E
Sbjct: 8   ITHLIKPVIEGMGYELLGIEYVASGKYSILRIFIDTNK-SISVNDCEIVSRQLSSIFDIE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             I G Y LEVSSPGI+RP+  K  +  + G  V   +      +    G I   SE
Sbjct: 67  EPISGQYNLEVSSPGIERPLFHKGHYQCFLGFNVKLHMFRPISGQSNFFGVIGSVSE 123


>gi|67923758|ref|ZP_00517222.1| Protein of unknown function DUF150 [Crocosphaera watsonii WH 8501]
 gi|67854385|gb|EAM49680.1| Protein of unknown function DUF150 [Crocosphaera watsonii WH 8501]
          Length = 151

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 1/132 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+ +EM    V +     K   +L++ +    G+ +L DCE++S+A+  I
Sbjct: 5   LIPQIIDLATPIAQEMGLEIVDVVFQTNKRPPVLRVDIRNTIGDTSLNDCEKVSRALESI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+ G Y LE+SSPGI R +  + DF+ + G  V         DK++  G++ G  
Sbjct: 65  LDERAIMPGAYVLEISSPGISRYLSSERDFIAFKGFEVKVTTNPPYMDKKEWQGRLQGRD 124

Query: 140 ETGFFLEKEKRG 151
           E   +L ++ R 
Sbjct: 125 EKAVYLNRKGRA 136


>gi|299534744|ref|ZP_07048074.1| hypothetical protein BFZC1_01897 [Lysinibacillus fusiformis ZC1]
 gi|298729832|gb|EFI70377.1| hypothetical protein BFZC1_01897 [Lysinibacillus fusiformis ZC1]
          Length = 158

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 81/151 (53%), Gaps = 5/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  + +P+++E++   V I  ++E +N  L+++V+  +G + +  C ++S+ +S +LD +
Sbjct: 8   IEELAKPIVDELNLELVDIEFVKEGRNWFLRVYVDTPEGGIDIDQCAQVSERLSLLLDEK 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ + +DF++  G  +  +      D ++  G +    E   
Sbjct: 68  DPITQNYYLEVSSPGAERPLKKDTDFVKAVGKFIYVKTYEPIKDMKEFQGYLTSYDEHTL 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E   +  K    + + I  + +  ARL +
Sbjct: 128 VMEVRIKTRK----ITVTIEQEKIALARLAI 154


>gi|229593531|ref|YP_001456060.2| hypothetical protein CKO_04571 [Citrobacter koseri ATCC BAA-895]
          Length = 150

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 8   LTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLDRPMFTAEHYARFLGEEVTLVLRMAVQNRRKWQGVI 117


>gi|89109935|ref|AP_003715.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|110643411|ref|YP_671141.1| hypothetical protein ECP_3258 [Escherichia coli 536]
 gi|110807039|ref|YP_690559.1| hypothetical protein SFV_3200 [Shigella flexneri 5 str. 8401]
 gi|157159426|ref|YP_001464647.1| hypothetical protein EcE24377A_3655 [Escherichia coli E24377A]
 gi|157162655|ref|YP_001459973.1| hypothetical protein EcHS_A3362 [Escherichia coli HS]
 gi|161367518|ref|NP_289746.2| hypothetical protein Z4531 [Escherichia coli O157:H7 EDL933]
 gi|161485816|ref|NP_708971.3| hypothetical protein SF3211 [Shigella flexneri 2a str. 301]
 gi|161486109|ref|NP_755794.2| hypothetical protein c3927 [Escherichia coli CFT073]
 gi|161486428|ref|NP_838681.2| hypothetical protein S3428 [Shigella flexneri 2a str. 2457T]
 gi|161950037|ref|YP_404833.2| hypothetical protein SDY_3349 [Shigella dysenteriae Sd197]
 gi|161986442|ref|YP_312126.2| hypothetical protein SSON_3316 [Shigella sonnei Ss046]
 gi|162139721|ref|NP_312078.3| hypothetical protein ECs4051 [Escherichia coli O157:H7 str. Sakai]
 gi|170082707|ref|YP_001732027.1| hypothetical protein ECDH10B_3344 [Escherichia coli str. K-12
           substr. DH10B]
 gi|187733192|ref|YP_001881913.1| hypothetical protein SbBS512_E3601 [Shigella boydii CDC 3083-94]
 gi|188492035|ref|ZP_02999305.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|195938390|ref|ZP_03083772.1| hypothetical protein EscherichcoliO157_18476 [Escherichia coli
           O157:H7 str. EC4024]
 gi|218550455|ref|YP_002384246.1| hypothetical protein EFER_3149 [Escherichia fergusonii ATCC 35469]
 gi|218555742|ref|YP_002388655.1| hypothetical protein ECIAI1_3320 [Escherichia coli IAI1]
 gi|218560242|ref|YP_002393155.1| hypothetical protein ECS88_3554 [Escherichia coli S88]
 gi|218691462|ref|YP_002399674.1| hypothetical protein ECED1_3830 [Escherichia coli ED1a]
 gi|218696877|ref|YP_002404544.1| hypothetical protein EC55989_3590 [Escherichia coli 55989]
 gi|218701941|ref|YP_002409570.1| hypothetical protein ECIAI39_3667 [Escherichia coli IAI39]
 gi|218706792|ref|YP_002414311.1| hypothetical protein ECUMN_3652 [Escherichia coli UMN026]
 gi|226524751|ref|NP_417639.6| ribosome maturation factor for 30S subunits [Escherichia coli str.
           K-12 substr. MG1655]
 gi|229597230|ref|YP_001723532.2| hypothetical protein EcolC_0528 [Escherichia coli ATCC 8739]
 gi|229775958|ref|YP_858789.2| hypothetical protein APECO1_3260 [Escherichia coli APEC O1]
 gi|254163114|ref|YP_003046222.1| hypothetical protein ECB_03037 [Escherichia coli B str. REL606]
 gi|254795121|ref|YP_003079958.1| hypothetical protein ECSP_4145 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018910|ref|ZP_05432775.1| hypothetical protein ShiD9_08333 [Shigella sp. D9]
 gi|256024254|ref|ZP_05438119.1| hypothetical protein E4_12823 [Escherichia sp. 4_1_40B]
 gi|307313123|ref|ZP_07592749.1| protein of unknown function DUF150 [Escherichia coli W]
 gi|312968491|ref|ZP_07782700.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|123342478|sp|Q0T0B1|RIMP_SHIF8 RecName: Full=Ribosome maturation factor rimP
 gi|123343572|sp|Q0TCT9|RIMP_ECOL5 RecName: Full=Ribosome maturation factor rimP
 gi|259585755|sp|A7ZS68|RIMP_ECO24 RecName: Full=Ribosome maturation factor rimP
 gi|259585756|sp|B7NKN9|RIMP_ECO7I RecName: Full=Ribosome maturation factor rimP
 gi|259585757|sp|B7N0V5|RIMP_ECO81 RecName: Full=Ribosome maturation factor rimP
 gi|259585758|sp|B7M078|RIMP_ECO8A RecName: Full=Ribosome maturation factor rimP
 gi|259585760|sp|B1XGY2|RIMP_ECODH RecName: Full=Ribosome maturation factor rimP
 gi|259585761|sp|A8A4Y6|RIMP_ECOHS RecName: Full=Ribosome maturation factor rimP
 gi|259585764|sp|B7MB91|RIMP_ECO45 RecName: Full=Ribosome maturation factor rimP
 gi|259585765|sp|B7LHN5|RIMP_ECO55 RecName: Full=Ribosome maturation factor rimP
 gi|259585766|sp|B7NDF6|RIMP_ECOLU RecName: Full=Ribosome maturation factor rimP
 gi|259585770|sp|B7LR39|RIMP_ESCF3 RecName: Full=Ribosome maturation factor rimP
 gi|259586197|sp|B2U205|RIMP_SHIB3 RecName: Full=Ribosome maturation factor rimP
 gi|269849638|sp|P0A8A8|RIMP_ECOLI RecName: Full=Ribosome maturation factor rimP
 gi|85675966|dbj|BAE77216.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|110345003|gb|ABG71240.1| putative cytoplasmic protein [Escherichia coli 536]
 gi|110616587|gb|ABF05254.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|157068335|gb|ABV07590.1| conserved hypothetical protein [Escherichia coli HS]
 gi|157081456|gb|ABV21164.1| conserved hypothetical protein [Escherichia coli E24377A]
 gi|169890542|gb|ACB04249.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187430184|gb|ACD09458.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
 gi|188487234|gb|EDU62337.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|218353609|emb|CAU99801.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218357996|emb|CAQ90642.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
 gi|218362510|emb|CAR00134.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|218367011|emb|CAR04782.1| conserved hypothetical protein [Escherichia coli S88]
 gi|218371927|emb|CAR19783.1| conserved hypothetical protein [Escherichia coli IAI39]
 gi|218429026|emb|CAR09973.2| conserved hypothetical protein [Escherichia coli ED1a]
 gi|218433889|emb|CAR14806.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|226510978|gb|AAC76204.4| ribosome maturation factor for 30S subunits [Escherichia coli str.
           K-12 substr. MG1655]
 gi|242378715|emb|CAQ33505.1| ribosome maturation protein [Escherichia coli BL21(DE3)]
 gi|253975015|gb|ACT40686.1| hypothetical protein ECB_03037 [Escherichia coli B str. REL606]
 gi|253979171|gb|ACT44841.1| hypothetical protein ECD_03037 [Escherichia coli BL21(DE3)]
 gi|254594521|gb|ACT73882.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|294489705|gb|ADE88461.1| conserved hypothetical protein [Escherichia coli IHE3034]
 gi|306907034|gb|EFN37542.1| protein of unknown function DUF150 [Escherichia coli W]
 gi|307555266|gb|ADN48041.1| putative cytoplasmic protein [Escherichia coli ABU 83972]
 gi|309703598|emb|CBJ02938.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
 gi|312286709|gb|EFR14620.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|313648588|gb|EFS13030.1| hypothetical protein SF2457T_3054 [Shigella flexneri 2a str. 2457T]
 gi|315137758|dbj|BAJ44917.1| conserved protein [Escherichia coli DH1]
 gi|315617253|gb|EFU97862.1| conserved hypothetical protein [Escherichia coli 3431]
 gi|320181446|gb|EFW56364.1| hypothetical protein SGB_01316 [Shigella boydii ATCC 9905]
 gi|320194656|gb|EFW69286.1| hypothetical protein EcoM_03098 [Escherichia coli WV_060327]
 gi|323165128|gb|EFZ50918.1| hypothetical protein SS53G_4591 [Shigella sonnei 53G]
 gi|323189207|gb|EFZ74491.1| hypothetical protein ECRN5871_2808 [Escherichia coli RN587/1]
 gi|327255186|gb|EGE66786.1| hypothetical protein ECSTEC7V_5219 [Escherichia coli STEC_7v]
 gi|332086098|gb|EGI91260.1| hypothetical protein SB521682_3815 [Shigella boydii 5216-82]
 gi|332752330|gb|EGJ82720.1| hypothetical protein SF434370_3403 [Shigella flexneri 4343-70]
 gi|332752857|gb|EGJ83242.1| hypothetical protein SFK671_3816 [Shigella flexneri K-671]
 gi|333014971|gb|EGK34315.1| hypothetical protein SFK227_3827 [Shigella flexneri K-227]
          Length = 150

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 8   LTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 117


>gi|219669698|ref|YP_002460133.1| hypothetical protein Dhaf_3680 [Desulfitobacterium hafniense DCB-2]
 gi|254800077|sp|B8FR10|RIMP_DESHD RecName: Full=Ribosome maturation factor rimP
 gi|219539958|gb|ACL21697.1| protein of unknown function DUF150 [Desulfitobacterium hafniense
           DCB-2]
          Length = 152

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++I PVI E     V +  ++E  +  L+I+++++ G + + DC  +S  +S +LD  
Sbjct: 9   VEAIIAPVITEQGLELVDVEYVKEGAHWYLRIYIDKE-GGVDIDDCTNVSHLVSEVLDKH 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG++RP+ +  DF R+ G +V           ++  G ++G  E   
Sbjct: 68  DPIAQAYMLEVSSPGLERPLKKDEDFERFTGKLVRVLTKEVYQGYKEFTGYLVGLIEDDI 127

Query: 144 FLEKEK 149
            LE EK
Sbjct: 128 VLEYEK 133


>gi|77165587|ref|YP_344112.1| hypothetical protein Noc_2122 [Nitrosococcus oceani ATCC 19707]
 gi|254434762|ref|ZP_05048270.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
 gi|91208399|sp|Q3J9B4|RIMP_NITOC RecName: Full=Ribosome maturation factor rimP
 gi|76883901|gb|ABA58582.1| Protein of unknown function DUF150 [Nitrosococcus oceani ATCC
           19707]
 gi|207091095|gb|EDZ68366.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
          Length = 151

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 5/102 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE--KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           IS +++PV+  + +  V +  L    K  LL+I+++   G +T+ DCE  S  IS +LDV
Sbjct: 7   ISELVEPVVAALGYELVGVERLSSVGKGALLRIYIDTPSG-ITIDDCERASHQISALLDV 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           E ++   Y LE+SSPG++RP+  +  F R+ G  V   I LS
Sbjct: 66  EELMASAYTLEISSPGLNRPLFTEEHFKRFTG--VEASITLS 105


>gi|30021906|ref|NP_833537.1| hypothetical protein BC3815 [Bacillus cereus ATCC 14579]
 gi|206972652|ref|ZP_03233593.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218235854|ref|YP_002368618.1| hypothetical protein BCB4264_A3915 [Bacillus cereus B4264]
 gi|296504312|ref|YP_003666012.1| hypothetical protein BMB171_C3482 [Bacillus thuringiensis BMB171]
 gi|34222809|sp|Q812X5|RIMP_BACCR RecName: Full=Ribosome maturation factor rimP
 gi|226706108|sp|B7HDU0|RIMP_BACC4 RecName: Full=Ribosome maturation factor rimP
 gi|29897462|gb|AAP10738.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
 gi|206732409|gb|EDZ49590.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218163811|gb|ACK63803.1| conserved hypothetical protein [Bacillus cereus B4264]
 gi|296325364|gb|ADH08292.1| hypothetical protein BMB171_C3482 [Bacillus thuringiensis BMB171]
          Length = 156

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 85/155 (54%), Gaps = 12/155 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +S+ +S  LD E
Sbjct: 9   VEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAVSERLSEALDKE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM---GTSE 140
           + I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++   GT+ 
Sbjct: 68  DPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKLLSYDGTTI 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           T     K ++ E       I IS D + +ARL VT
Sbjct: 128 TLLLTIKTRKKE-------IQISMDKVANARLAVT 155


>gi|74316717|ref|YP_314457.1| hypothetical protein Tbd_0699 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056212|gb|AAZ96652.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 161

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 73/115 (63%), Gaps = 7/115 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           D+ + ++PV+  + +   ++ +LE     LL+IF+++  G +T+ DC  +S  ++ +  V
Sbjct: 22  DLPARLEPVLAGLGY---ELVMLERAGRGLLRIFIDKP-GGVTIDDCVAVSNHLTHLFTV 77

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           ENI   + RLEVSSPG+DRP+V+  D+ R+ G  V  ++ +   ++++L G+++G
Sbjct: 78  ENI--DYDRLEVSSPGLDRPLVKPQDYARFAGEQVTLKLRVPMDNRRRLSGQLLG 130


>gi|259586209|sp|A3QGU7|RIMP_SHELP RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 9/125 (7%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L+++++ ++G + + DC ++S+ IS +LDVE+ I   Y LEVSSPG+DRP+     
Sbjct: 33  KHSVLRVYIDNENG-IFIDDCADVSRQISAVLDVEDPISTEYTLEVSSPGVDRPLFTAEQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           + R+ G  V  ++ +     + L G + G       L        D NEL IA+  D++ 
Sbjct: 92  YARYLGETVKVQLTMPVAGSRNLKGTVAGVEGQMLTL------TVDGNELIIAL--DNIR 143

Query: 169 SARLI 173
              LI
Sbjct: 144 KGNLI 148


>gi|242240751|ref|YP_002988932.1| hypothetical protein Dd703_3348 [Dickeya dadantii Ech703]
 gi|242132808|gb|ACS87110.1| protein of unknown function DUF150 [Dickeya dadantii Ech703]
          Length = 140

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 64/108 (59%), Gaps = 1/108 (0%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S ++DVE+ I 
Sbjct: 1   MISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVMDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VAYNLEVSSPGVDRPLFTAEHYERFTGEEVSLVLRMAVQNRRKWQGII 107


>gi|284925431|gb|ADC27783.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 140

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE+ + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVESPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K   KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELVK----ITTNEKEKFEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135

Query: 172 LIV 174
             V
Sbjct: 136 TFV 138


>gi|83644099|ref|YP_432534.1| hypothetical protein HCH_01237 [Hahella chejuensis KCTC 2396]
 gi|83632142|gb|ABC28109.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 173

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 4/122 (3%)

Query: 15  IFGDMGLA--GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEE 71
           + GD  LA   D+  +++PV+E M      +  + + K  LL+I+++++ G + + DCE+
Sbjct: 18  LIGDNLLARKDDLYQLLKPVVEGMGCDFWGMDYIAQGKRSLLRIYIDKESG-VLVDDCEK 76

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ IS ILDVE+ I+G Y LEVSSPG DRP+     +  + G ++   +      ++K 
Sbjct: 77  VSRQISAILDVEDPIKGEYTLEVSSPGWDRPLFNVEQYKAYIGSIIEVRLQAPFNGRRKF 136

Query: 132 IG 133
            G
Sbjct: 137 KG 138


>gi|304396346|ref|ZP_07378227.1| protein of unknown function DUF150 [Pantoea sp. aB]
 gi|304355855|gb|EFM20221.1| protein of unknown function DUF150 [Pantoea sp. aB]
          Length = 143

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + +  V I  +  +  +L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 1   MTELVSAPVEALGYELVGIEFVRSRTSILRIYIDSEDG-INVDDCADVSHQVSAVMDVED 59

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  PITVPYNLEVSSPGLDRPLFTAEHYTRFMGEEVSLVLRMAVQNRRKWQGTI 110


>gi|259907040|ref|YP_002647396.1| YhbC-like protein [Erwinia pyrifoliae Ep1/96]
 gi|292900767|ref|YP_003540136.1| hypothetical protein EAM_3073 [Erwinia amylovora ATCC 49946]
 gi|224962662|emb|CAX54117.1| YhbC-like protein [Erwinia pyrifoliae Ep1/96]
 gi|291200615|emb|CBJ47747.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|310766252|gb|ADP11202.1| YhbC-like protein [Erwinia sp. Ejp617]
          Length = 152

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYDRFTGEEVSLVLRMAVQNRRKWQGII 119


>gi|154706898|ref|YP_001423971.1| hypothetical protein CBUD_0561 [Coxiella burnetii Dugway 5J108-111]
 gi|189040247|sp|A9KBL9|RIMP_COXBN RecName: Full=Ribosome maturation factor rimP
 gi|154356184|gb|ABS77646.1| hypothetical cytosolic protein [Coxiella burnetii Dugway 5J108-111]
          Length = 153

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V   L       +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATRILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGN 97


>gi|297580767|ref|ZP_06942693.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535183|gb|EFH74018.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 151

 Score = 67.4 bits (163), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G +T+ DC E+S+ +S +LDVE+ I   Y LEVSSPG+++P+ + + + ++
Sbjct: 37  LRIFIDHENG-ITVEDCAEVSRQVSAVLDVEDPISVVYNLEVSSPGLEKPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 96  IGHEVSIVLKMAVGNRRKWKGVI 118


>gi|127513757|ref|YP_001094954.1| hypothetical protein Shew_2829 [Shewanella loihica PV-4]
 gi|126639052|gb|ABO24695.1| protein of unknown function DUF150 [Shewanella loihica PV-4]
          Length = 161

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 9/125 (7%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L+++++ ++G + + DC ++S+ IS +LDVE+ I   Y LEVSSPG+DRP+     
Sbjct: 43  KHSVLRVYIDNENG-IFIDDCADVSRQISAVLDVEDPISTEYTLEVSSPGVDRPLFTAEQ 101

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           + R+ G  V  ++ +     + L G + G       L        D NEL IA+  D++ 
Sbjct: 102 YARYLGETVKVQLTMPVAGSRNLKGTVAGVEGQMLTL------TVDGNELIIAL--DNIR 153

Query: 169 SARLI 173
              LI
Sbjct: 154 KGNLI 158


>gi|315123740|ref|YP_004065744.1| YlxS [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315017462|gb|ADT65555.1| YlxS [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 140

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + R   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSRIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K   KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELVK----ITTNEKEKFEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135

Query: 172 LIV 174
             +
Sbjct: 136 TFI 138


>gi|182680748|ref|YP_001828908.1| hypothetical protein XfasM23_0177 [Xylella fastidiosa M23]
 gi|226695961|sp|B2I724|RIMP_XYLF2 RecName: Full=Ribosome maturation factor rimP
 gi|259016318|sp|Q87EV6|RIMP_XYLFT RecName: Full=Ribosome maturation factor rimP
 gi|182630858|gb|ACB91634.1| protein of unknown function DUF150 [Xylella fastidiosa M23]
          Length = 199

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    LL     +L+++++     + +  +++ DCE +S+ +S
Sbjct: 7   EIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 67  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 127 VEQVGGFVVLL------VNGVELAVDFNNIDKARIV 156


>gi|237808992|ref|YP_002893432.1| hypothetical protein Tola_2248 [Tolumonas auensis DSM 9187]
 gi|259645129|sp|C4L8X6|RIMP_TOLAT RecName: Full=Ribosome maturation factor rimP
 gi|237501253|gb|ACQ93846.1| protein of unknown function DUF150 [Tolumonas auensis DSM 9187]
          Length = 152

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+  L+++++  +G +++ DC E S  +S +LDVE+ I   Y LEVSSPG+DRP+++   
Sbjct: 33  KHSTLRVYIDHANG-ISVDDCAEASHQVSALLDVEDPITTEYYLEVSSPGMDRPLLKPEH 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           F R+ G V    + ++  +++K  G I
Sbjct: 92  FARYIGQVATVTLRMAVNNRRKYKGTI 118


>gi|57237145|ref|YP_178157.1| hypothetical protein CJE0133 [Campylobacter jejuni RM1221]
 gi|218561819|ref|YP_002343598.1| hypothetical protein Cj0138 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|34223082|sp|Q9PIY9|RIMP_CAMJE RecName: Full=Ribosome maturation factor rimP
 gi|81354202|sp|Q5HX28|RIMP_CAMJR RecName: Full=Ribosome maturation factor rimP
 gi|57165949|gb|AAW34728.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
 gi|112359525|emb|CAL34309.1| conserved hypothetical protein Cj0138 [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315057578|gb|ADT71907.1| hypothetical protein CJS3_0137 [Campylobacter jejuni subsp. jejuni
           S3]
 gi|315926922|gb|EFV06284.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 140

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE+ + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVESPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K   KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELVK----ITTNEKEKFEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135

Query: 172 LIV 174
             V
Sbjct: 136 TFV 138


>gi|238019443|ref|ZP_04599869.1| hypothetical protein VEIDISOL_01312 [Veillonella dispar ATCC 17748]
 gi|237864142|gb|EEP65432.1| hypothetical protein VEIDISOL_01312 [Veillonella dispar ATCC 17748]
          Length = 170

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 69/117 (58%), Gaps = 1/117 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ +S +LD ++
Sbjct: 28  VSSVVEGIIAGTEMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEKLSAVLDEKD 86

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            I  +Y LEVSSPG+DR + +  D +R+NG  V  ++       ++  G + G ++T
Sbjct: 87  PITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKPINGSKQFTGVLEGFTDT 143


>gi|271499172|ref|YP_003332197.1| hypothetical protein Dd586_0598 [Dickeya dadantii Ech586]
 gi|270342727|gb|ACZ75492.1| protein of unknown function DUF150 [Dickeya dadantii Ech586]
          Length = 152

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTEMISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+   + +  + G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPISVAYNLEVSSPGLDRPLFTAAHYAHFVGEEVSLVLRMAVQNRRKWQGII 119


>gi|15892741|ref|NP_360455.1| hypothetical protein RC0818 [Rickettsia conorii str. Malish 7]
 gi|34222951|sp|Q92HF3|RIMP_RICCN RecName: Full=Ribosome maturation factor rimP
 gi|15619918|gb|AAL03356.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 161

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 87/160 (54%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVE 83
           I++VI+  + +M F  V +        +++I ++  +   +++ DC + S+ IS ILDVE
Sbjct: 8   IANVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNSEKISVEDCTKASRTISAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+       
Sbjct: 68  DLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAENNKI 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E        E ++ I +D + +A L++T+E+ +  L
Sbjct: 128 YLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLL 159


>gi|307579212|gb|ADN63181.1| hypothetical protein XFLM_06240 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 176

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 86/156 (55%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    LL     +L+++++     + +  +++ DCE +S+ +S
Sbjct: 7   EIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 67  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 127 VEQVGGFVVLL------VNGVELAVDFNNIDKARIV 156


>gi|304437179|ref|ZP_07397140.1| protein of hypothetical function DUF150 [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369841|gb|EFM23505.1| protein of hypothetical function DUF150 [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 163

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 10/122 (8%)

Query: 25  ISSVIQPVIEEM---------SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           +S+ I+  +EEM         +   V +  ++E++  L++++++  G + + DC+ LS+ 
Sbjct: 15  MSAKIEERVEEMVRGLLTDSPAIELVDVEYVKERDYYLRVYIDKA-GGIDIDDCQRLSER 73

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  ILD E++I   Y LEVSSPG+DR + ++ DF+R +G VV   +      K++  G +
Sbjct: 74  LEEILDREDVIPDAYTLEVSSPGLDRVLRKERDFVREHGRVVDVTLYAPFEGKKQWTGTL 133

Query: 136 MG 137
            G
Sbjct: 134 AG 135


>gi|52785643|ref|YP_091472.1| hypothetical protein BLi01884 [Bacillus licheniformis ATCC 14580]
 gi|52348145|gb|AAU40779.1| YlxS [Bacillus licheniformis ATCC 14580]
          Length = 166

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 64/94 (68%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S ++QP+++ +    V I  ++E ++  L++F++ DDG + + +C ++S+A+S  LD  
Sbjct: 18  VSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDDG-VDIEECAKVSEALSEKLDEA 76

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I+ +Y LEVSSPG +RP+ +++DF++  G  V
Sbjct: 77  DPIKQNYFLEVSSPGAERPLKKEADFMKALGKNV 110


>gi|157828687|ref|YP_001494929.1| hypothetical protein A1G_04605 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933406|ref|YP_001650195.1| ribosome maturation protein RimP [Rickettsia rickettsii str. Iowa]
 gi|167012960|sp|A8GSP6|RIMP_RICRS RecName: Full=Ribosome maturation factor rimP
 gi|189040651|sp|B0BY63|RIMP_RICRO RecName: Full=Ribosome maturation factor rimP
 gi|157801168|gb|ABV76421.1| hypothetical protein A1G_04605 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908493|gb|ABY72789.1| hypothetical cytosolic protein [Rickettsia rickettsii str. Iowa]
          Length = 161

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 87/160 (54%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVE 83
           I++VI+  + +M F  V +        +++I ++  +   +++ DC + S+ IS ILDVE
Sbjct: 8   ITNVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNSEKVSVEDCTKASRTISAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+       
Sbjct: 68  DLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAENNKI 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E        E ++ I +D + +A L++T+E+ +  L
Sbjct: 128 YLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLL 159


>gi|152976183|ref|YP_001375700.1| hypothetical protein Bcer98_2469 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189039695|sp|A7GRE7|RIMP_BACCN RecName: Full=Ribosome maturation factor rimP
 gi|152024935|gb|ABS22705.1| protein of unknown function DUF150 [Bacillus cytotoxicus NVH
           391-98]
          Length = 156

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 85/155 (54%), Gaps = 12/155 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++ QP++EE++   V +  ++E K+  L++F++ + G + + +C  +S+ +S  LD E
Sbjct: 9   VEALAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSETG-VDIEECGAVSERLSEALDKE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM---GTSE 140
           + I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++   GT+ 
Sbjct: 68  DPIPHLYFLDVSSPGAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLLSYDGTTI 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           T     K ++ E       I I  D + +ARL VT
Sbjct: 128 TLLLTIKTRKKE-------IQIPMDKVANARLAVT 155


>gi|328885405|emb|CCA58644.1| conserved hypothetical protein [Streptomyces venezuelae ATCC 10712]
          Length = 168

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 3/96 (3%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFL 110
           LL+I V+ D+G + L  C ELS+AIS  LD  + + EG Y LEVSSPG DRP+ +   ++
Sbjct: 37  LLRIVVDSDEG-VELDACAELSRAISEKLDETDAMGEGEYVLEVSSPGADRPLTQHRHYV 95

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           R  G +V  ++  S G  ++L+ +I+   E G  LE
Sbjct: 96  RATGRLVKLQLS-SDGAAEELVARIVAVDEDGLDLE 130


>gi|110801637|ref|YP_698977.1| hypothetical protein CPR_1662 [Clostridium perfringens SM101]
 gi|123341718|sp|Q0SSD0|RIMP_CLOPS RecName: Full=Ribosome maturation factor rimP
 gi|110682138|gb|ABG85508.1| conserved hypothetical protein [Clostridium perfringens SM101]
          Length = 154

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 1/129 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+ ++  P+++E  +    I  ++E N   L++++E+ +  ++LRDCE +S+A+S +
Sbjct: 6   LVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSRALSDM 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E+ I+  Y LEVSSPG++R +     F R+ G  +      S   ++ + G +    
Sbjct: 66  LDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEIFVGFKSSLSGRKNVKGILKDVQ 125

Query: 140 ETGFFLEKE 148
           E    +E E
Sbjct: 126 ENEIIVECE 134


>gi|307129383|ref|YP_003881399.1| hypothetical protein Dda3937_02343 [Dickeya dadantii 3937]
 gi|306526912|gb|ADM96842.1| conserved protein [Dickeya dadantii 3937]
          Length = 150

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 68/115 (59%), Gaps = 1/115 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           DVE+ I   Y LEVSSPG++RP+   + + R+ G  V+  + ++  +++K  G I
Sbjct: 63  DVEDPISVAYNLEVSSPGLERPLFTAAHYERFAGEEVSLVLRMAVQNRRKWQGII 117


>gi|229824766|ref|ZP_04450835.1| hypothetical protein GCWU000182_00115 [Abiotrophia defectiva ATCC
           49176]
 gi|229791095|gb|EEP27209.1| hypothetical protein GCWU000182_00115 [Abiotrophia defectiva ATCC
           49176]
          Length = 155

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 7/144 (4%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++I P+I + ++  V +  + E  N  L+ +V+++ G  ++ DCE++S+  S +LD E+ 
Sbjct: 13  ALILPIINKNNYELVDVEFVREGSNWFLRAYVDKE-GGFSVNDCEKVSREFSDLLDKEDF 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG----TSET 141
           IE  Y LE+SSPG+ RP+ +  DF R  G  V  ++  +  ++++  G +      T   
Sbjct: 72  IEESYILEISSPGLGRPLKKDKDFERSIGEEVEVKLYKAFEEQKEFSGTLEAYDAQTVTI 131

Query: 142 GFFLEKEKRGE-KDMNELQIAISF 164
           GF    EK  E K++  +++AI F
Sbjct: 132 GFEDNTEKTFERKNIALIRLAIDF 155


>gi|292486835|ref|YP_003529705.1| hypothetical protein EAMY_0347 [Erwinia amylovora CFBP1430]
 gi|283476836|emb|CAY72674.1| UPF0090 protein yhbC [Erwinia pyrifoliae DSM 12163]
 gi|291552252|emb|CBA19289.1| UPF0090 protein yhbC [Erwinia amylovora CFBP1430]
 gi|312170903|emb|CBX79162.1| UPF0090 protein yhbC [Erwinia amylovora ATCC BAA-2158]
          Length = 150

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 8   LTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLDRPMFTAEHYDRFTGEEVSLVLRMAVQNRRKWQGII 117


>gi|302389799|ref|YP_003825620.1| protein of unknown function DUF150 [Thermosediminibacter oceani DSM
           16646]
 gi|302200427|gb|ADL07997.1| protein of unknown function DUF150 [Thermosediminibacter oceani DSM
           16646]
          Length = 162

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 64/106 (60%), Gaps = 2/106 (1%)

Query: 32  VIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           VI +  F  V +  ++E  +  L+ ++++  G +TL DC+E+S+ IS  LD+E+ I   Y
Sbjct: 17  VIHDRGFELVDVEFVQEAGSWYLRYYIDKP-GGITLDDCQEVSEEISRRLDIEDPIPHSY 75

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LEVSSPG++RP+ ++ DFL++ G  V  ++      K+   G ++
Sbjct: 76  ILEVSSPGVERPLKKEKDFLKYIGSEVEIKVFEPIAGKKAFTGTLI 121


>gi|251791037|ref|YP_003005758.1| hypothetical protein Dd1591_3467 [Dickeya zeae Ech1591]
 gi|247539658|gb|ACT08279.1| protein of unknown function DUF150 [Dickeya zeae Ech1591]
          Length = 154

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+
Sbjct: 12  LTEMISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+   + +  + G  V+  + ++  +++K  G I
Sbjct: 71  PISVAYNLEVSSPGLDRPLFTAAHYAHFVGEEVSLVLRMAVQNRRKWQGII 121


>gi|52080266|ref|YP_079057.1| hypothetical protein BL01228 [Bacillus licheniformis ATCC 14580]
 gi|319645954|ref|ZP_08000184.1| hypothetical protein HMPREF1012_01218 [Bacillus sp. BT1B_CT2]
 gi|91208394|sp|Q65JI5|RIMP_BACLD RecName: Full=Ribosome maturation factor rimP
 gi|52003477|gb|AAU23419.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
 gi|317391704|gb|EFV72501.1| hypothetical protein HMPREF1012_01218 [Bacillus sp. BT1B_CT2]
          Length = 157

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 64/94 (68%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S ++QP+++ +    V I  ++E ++  L++F++ DDG + + +C ++S+A+S  LD  
Sbjct: 9   VSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDDG-VDIEECAKVSEALSEKLDEA 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I+ +Y LEVSSPG +RP+ +++DF++  G  V
Sbjct: 68  DPIKQNYFLEVSSPGAERPLKKEADFMKALGKNV 101


>gi|259585768|sp|A4WEY5|RIMP_ENT38 RecName: Full=Ribosome maturation factor rimP
 gi|145320118|gb|ABP62265.1| protein of unknown function DUF150 [Enterobacter sp. 638]
          Length = 160

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 18  LTEMIKAPVEALGYELVGIEFIRSRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 76

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+ RPM     +  + G  VA  + ++  +++K  G I
Sbjct: 77  PITVAYNLEVSSPGLHRPMFTAEHYTHYIGEEVAVVLRMAVQNRRKWQGVI 127


>gi|78358200|ref|YP_389649.1| hypothetical protein Dde_3160 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|91208345|sp|Q30WJ2|RIMP_DESDG RecName: Full=Ribosome maturation factor rimP
 gi|78220605|gb|ABB39954.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 173

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 8/151 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I PVI         +  ++    +L+I+++  DG +T+  C  +S+ I   L+VE+II 
Sbjct: 15  IITPVIRSFDLELWGMDFIQGGKAVLRIYIDGPDG-VTIDQCATVSRHIGLALEVEDIIA 73

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-----GDKQKLIGKIMGTSETG 142
           G Y LEVSSPG++RP+   +    + GH    E+VL +       ++K  G +       
Sbjct: 74  GAYNLEVSSPGLERPLFSAAQLAAYKGH--KAELVLRAPCAQFPGRKKFTGVVGNVEGEN 131

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           F L+ +     D  + +++  +D +  ARLI
Sbjct: 132 FTLQIDPLKGGDNLQEELSAHWDDVKKARLI 162


>gi|91208384|sp|Q31W49|RIMP_SHIBS RecName: Full=Ribosome maturation factor rimP
 gi|81247001|gb|ABB67709.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 152

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ +I   +E + F  V I  +      L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 119


>gi|53729158|ref|ZP_00133985.2| COG0779: Uncharacterized protein conserved in bacteria
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208119|ref|YP_001053344.1| hypothetical protein APL_0637 [Actinobacillus pleuropneumoniae L20]
 gi|165976049|ref|YP_001651642.1| hypothetical protein APJL_0628 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|190149947|ref|YP_001968472.1| hypothetical protein APP7_0678 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307249836|ref|ZP_07531812.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307261094|ref|ZP_07542773.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307263275|ref|ZP_07544893.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|167016737|sp|A3N003|RIMP_ACTP2 RecName: Full=Ribosome maturation factor rimP
 gi|226707976|sp|B0BNR3|RIMP_ACTPJ RecName: Full=Ribosome maturation factor rimP
 gi|226708014|sp|B3H161|RIMP_ACTP7 RecName: Full=Ribosome maturation factor rimP
 gi|126096911|gb|ABN73739.1| hypothetical protein APL_0637 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|165876150|gb|ABY69198.1| hypothetical protein APJL_0628 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189915078|gb|ACE61330.1| hypothetical protein APP7_0678 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306858138|gb|EFM90218.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306869226|gb|EFN01024.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871337|gb|EFN03063.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 153

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 2/116 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE M F  V I        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEELVSDTIESMGFELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKL 118


>gi|229577503|ref|YP_001178316.2| hypothetical protein Ent638_3607 [Enterobacter sp. 638]
          Length = 150

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I+  +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMIKAPVEALGYELVGIEFIRSRTSTLRIYIDSEDG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           DVE+ I   Y LEVSSPG+ RPM     +  + G  VA  + ++  +++K  G I
Sbjct: 63  DVEDPITVAYNLEVSSPGLHRPMFTAEHYTHYIGEEVAVVLRMAVQNRRKWQGVI 117


>gi|326565083|gb|EGE15276.1| hypothetical protein E9M_00058 [Moraxella catarrhalis 46P47B1]
 gi|326567251|gb|EGE17371.1| hypothetical protein E9O_01044 [Moraxella catarrhalis 12P80B1]
          Length = 165

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 18/165 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDG-NMTLRDCEELSQA 75
            +++ +I P ++        I  + + +  LL+I++E     R  G ++T+ DC  ++  
Sbjct: 8   AELTELIAPAVDACGVDLWGIEFMPQGRKSLLRIYIESLPENRAAGEHVTIEDCSAVNHQ 67

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV--LSSGD--KQKL 131
           +S +LDV + I G Y LEVSSPG DRP+  +     + G  +   ++  + SGD  ++K+
Sbjct: 68  VSGVLDVHDPIAGEYVLEVSSPGFDRPLFTREQVAAYVGETINLRLIHAIGSGDTKRRKV 127

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +G++    E    +  E       ++L+  I+FDS+  A L+  D
Sbjct: 128 VGRLTCVGEDSMTVITE-------DKLEFNIAFDSVDKAHLVYED 165


>gi|311277857|ref|YP_003940088.1| hypothetical protein Entcl_0527 [Enterobacter cloacae SCF1]
 gi|308747052|gb|ADO46804.1| protein of unknown function DUF150 [Enterobacter cloacae SCF1]
          Length = 150

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 8   LTEMLTAPVEALGFELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGII 117


>gi|166030877|ref|ZP_02233706.1| hypothetical protein DORFOR_00557 [Dorea formicigenerans ATCC
           27755]
 gi|166029144|gb|EDR47901.1| hypothetical protein DORFOR_00557 [Dorea formicigenerans ATCC
           27755]
          Length = 157

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 64/107 (59%), Gaps = 2/107 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P++EE+ F  V +  ++E ++  L+ ++++  G +T+ DCE +S+ +S ILD ++ I
Sbjct: 14  ILNPIMEELEFELVDVEYVKEGSMWYLRAYIDKP-GGITVNDCEAVSRRLSDILDEKDFI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           E  Y LEVSSPG+ RP+ ++ D+ R  G  V          K++  G
Sbjct: 73  EDSYVLEVSSPGLGRPLKKEKDYKRNLGKEVEIRTYRMVDKKKEFTG 119


>gi|165936752|ref|ZP_02225319.1| protein YhbC [Yersinia pestis biovar Orientalis str. IP275]
 gi|165915401|gb|EDR34011.1| protein YhbC [Yersinia pestis biovar Orientalis str. IP275]
          Length = 134

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 34  EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLE 93
           E + +  V I  +  +   L+I+++ DDG +T+  C ++S  +S +LDVE+ I   Y LE
Sbjct: 1   EALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQVSAVLDVEDPITVAYNLE 59

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           VSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 101


>gi|71276364|ref|ZP_00652641.1| Protein of unknown function DUF150 [Xylella fastidiosa Dixon]
 gi|71898653|ref|ZP_00680823.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
 gi|170729431|ref|YP_001774864.1| hypothetical protein Xfasm12_0201 [Xylella fastidiosa M12]
 gi|71162826|gb|EAO12551.1| Protein of unknown function DUF150 [Xylella fastidiosa Dixon]
 gi|71731600|gb|EAO33661.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
 gi|167964224|gb|ACA11234.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 215

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 6/118 (5%)

Query: 56  FVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           F  + +  +++ DCE +S+ +S  LD+E  I G+Y LEVSSPG+DR +     F R + H
Sbjct: 61  FAMQPECMVSIDDCERVSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNH 120

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +V   + L     ++L GKI+   + G F+         +N +++A+ F+++  AR++
Sbjct: 121 LVKVGLKLQQHGSRRLQGKIVRVEQVGGFVVLL------VNGVELAVDFNNIDKARIV 172


>gi|330447379|ref|ZP_08311028.1| ribosome maturation protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491570|dbj|GAA05525.1| ribosome maturation protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 151

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 73/120 (60%), Gaps = 2/120 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +++P +  + +  V +  +   ++  L++F++ ++G + + DC E+S+ IS 
Sbjct: 3   ALETQLTEMLEPSVLALGYELVGLEFIRAGEHSTLRVFIDHENG-INVDDCAEVSRQISA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH  +  + ++ G+++K  G I+  
Sbjct: 62  VMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFVGHEASIVLKMAMGNRRKWKGDIVAV 121


>gi|304439998|ref|ZP_07399891.1| protein of hypothetical function DUF150 [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371490|gb|EFM25103.1| protein of hypothetical function DUF150 [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 154

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G+   ++ +   V EE  +  V+++  +   + L+ +F+ ++DG ++L DC+ +S+AI  
Sbjct: 6   GILSKLNEISTKVAEERGYEIVEVAYKKATPHSLVSVFIYKEDG-ISLDDCDTMSRAIEE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
            LD E+IIE  Y LEVSSPG+DRP+  + D  R  G +V  ++
Sbjct: 65  ELDKEDIIEESYYLEVSSPGLDRPIKTQDDLRRNKGKLVEAKL 107


>gi|157085946|gb|ABV15624.1| hypothetical protein CKO_04571 [Citrobacter koseri ATCC BAA-895]
          Length = 140

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYARFLGEEVTLVLRMAVQNRRKWQGVI 107


>gi|254507524|ref|ZP_05119658.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
 gi|219549594|gb|EED26585.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
          Length = 151

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G + + DC E+S+ +S ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHENG-INVEDCAEVSRQVSAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 96  IGHEVSIVLKMAVGNRRKWKGVI 118


>gi|78044682|ref|YP_360590.1| hypothetical protein CHY_1770 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|91208344|sp|Q3AB94|RIMP_CARHZ RecName: Full=Ribosome maturation factor rimP
 gi|77996797|gb|ABB15696.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 154

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 19  MGLAGDISSVIQPVIE----EMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELS 73
           MG    I   + P+ E    E++   V +  ++E     L+I++++D+G + L DC+  S
Sbjct: 1   MGRNKGIEQKVWPLAERVGGELNLEVVDVEFVKEAGRYFLRIYIDKDEG-VDLDDCQNFS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + I  ILD E+ I   Y LEVSSPGI+RP+ + +DF ++ G     +   +   +++  G
Sbjct: 60  ERIGVILDEEDPIPQSYYLEVSSPGIERPLKKLADFEKFAGREAQIKTFAAIEGQKQFKG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIA---ISFD 165
           K++G  +    ++  K GE  +   QIA   ++FD
Sbjct: 120 KLLGVRDGQVVIDAGK-GEVQIPLEQIAKANLTFD 153


>gi|150016082|ref|YP_001308336.1| hypothetical protein Cbei_1198 [Clostridium beijerinckii NCIMB
           8052]
 gi|189038629|sp|A6LSQ0|RIMP_CLOB8 RecName: Full=Ribosome maturation factor rimP
 gi|149902547|gb|ABR33380.1| protein of unknown function DUF150 [Clostridium beijerinckii NCIMB
           8052]
          Length = 152

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 11/149 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  +++P++ E+S     +  ++E     L+I+++++ G ++L DCE +S+ +S ILDVE
Sbjct: 10  IEELVRPIVSELSCELYYVEYVKENGEFYLRIYIDKE-GRVSLNDCEAVSRRVSEILDVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+  Y LEVSSPG++R + ++  F ++ G  V   +  S    + + G +   SE   
Sbjct: 69  DPIKEAYYLEVSSPGLNRGLYKEEHFKKYIGSEVLIRLTSSLNGVKSVKGLLRDVSEDSI 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +E          E +I I  D + +A L
Sbjct: 129 LVE---------GETEIQIPRDKIKAANL 148


>gi|323495467|ref|ZP_08100542.1| ribosome maturation protein RimP [Vibrio sinaloensis DSM 21326]
 gi|323319464|gb|EGA72400.1| ribosome maturation protein RimP [Vibrio sinaloensis DSM 21326]
          Length = 140

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G + + DC E+S+ +S ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 26  LRIFIDHENG-INVEDCAEVSRQVSAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQF 84

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 85  IGHEVSIVLKMAVGNRRKWKGVI 107


>gi|260775411|ref|ZP_05884308.1| UPF0090 domain-containing protein [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608592|gb|EEX34757.1| UPF0090 domain-containing protein [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 151

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G +++ DC E+S+ +S ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHENG-ISVDDCAEVSRQVSAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 96  IGHEVSIVLKMAVGNRRKWKGVI 118


>gi|86153804|ref|ZP_01072007.1| YlxS [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842765|gb|EAQ59977.1| YlxS [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 140

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K   KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELVK----ITTNEKEKFEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135

Query: 172 LIV 174
             V
Sbjct: 136 TFV 138


>gi|259016317|sp|B0U1Q6|RIMP_XYLFM RecName: Full=Ribosome maturation factor rimP
          Length = 199

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 67/118 (56%), Gaps = 6/118 (5%)

Query: 56  FVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           F  + +  +++ DCE +S+ +S  LD+E  I G+Y LEVSSPG+DR +     F R + H
Sbjct: 45  FAMQPECMVSIDDCERVSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNH 104

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +V   + L     ++L GKI+   + G F+         +N +++A+ F+++  AR++
Sbjct: 105 LVKVGLKLQQHGSRRLQGKIVRVEQVGGFVVLL------VNGVELAVDFNNIDKARIV 156


>gi|292492784|ref|YP_003528223.1| hypothetical protein Nhal_2769 [Nitrosococcus halophilus Nc4]
 gi|291581379|gb|ADE15836.1| protein of unknown function DUF150 [Nitrosococcus halophilus Nc4]
          Length = 150

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 66/114 (57%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           IS +++PV+  + +  V +  L   K +LL+I+++   G +T+ DCE +S  +S +LDVE
Sbjct: 7   ISKLVEPVVTALGYELVGVERLSIGKGVLLRIYIDTPLG-VTVDDCERVSHQVSALLDVE 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +   Y LE+SSPG+DRP+  +  F R+ G  V+  +      +++  G + G
Sbjct: 66  EPMASPYTLEISSPGLDRPLFTEEHFKRFAGAEVSITLSEPLNGRRRFKGLLRG 119


>gi|209920647|ref|YP_002294731.1| hypothetical protein ECSE_3456 [Escherichia coli SE11]
 gi|215488488|ref|YP_002330919.1| hypothetical protein E2348C_3451 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|253771994|ref|YP_003034825.1| hypothetical protein ECBD_0570 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|260845985|ref|YP_003223763.1| hypothetical protein ECO103_3919 [Escherichia coli O103:H2 str.
           12009]
 gi|260857299|ref|YP_003231190.1| hypothetical protein ECO26_4276 [Escherichia coli O26:H11 str.
           11368]
 gi|260869922|ref|YP_003236324.1| hypothetical protein ECO111_3994 [Escherichia coli O111:H- str.
           11128]
 gi|261228182|ref|ZP_05942463.1| hypothetical protein EscherichiacoliO157_26753 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255038|ref|ZP_05947571.1| hypothetical protein EscherichiacoliO157EcO_04328 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|297519523|ref|ZP_06937909.1| hypothetical protein EcolOP_17907 [Escherichia coli OP50]
 gi|300817578|ref|ZP_07097794.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300823867|ref|ZP_07103991.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300897934|ref|ZP_07116313.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300904356|ref|ZP_07122209.1| hypothetical protein HMPREF9536_02438 [Escherichia coli MS 84-1]
 gi|300918925|ref|ZP_07135484.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300926091|ref|ZP_07141909.1| hypothetical protein HMPREF9548_04117 [Escherichia coli MS 182-1]
 gi|300929860|ref|ZP_07145306.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300938080|ref|ZP_07152858.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300948820|ref|ZP_07162888.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300955756|ref|ZP_07168101.1| hypothetical protein HMPREF9547_01616 [Escherichia coli MS 175-1]
 gi|300977837|ref|ZP_07174077.1| hypothetical protein HMPREF9553_01175 [Escherichia coli MS 200-1]
 gi|300990770|ref|ZP_07179342.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301022025|ref|ZP_07185968.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|301025985|ref|ZP_07189467.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|301047987|ref|ZP_07195029.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|301301774|ref|ZP_07207908.1| hypothetical protein HMPREF9347_00334 [Escherichia coli MS 124-1]
 gi|301326407|ref|ZP_07219761.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|301644881|ref|ZP_07244853.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|306816486|ref|ZP_07450618.1| hypothetical protein ECNC101_07709 [Escherichia coli NC101]
 gi|307139857|ref|ZP_07499213.1| hypothetical protein EcolH7_17218 [Escherichia coli H736]
 gi|309785497|ref|ZP_07680128.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|309793748|ref|ZP_07688174.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|312972557|ref|ZP_07786730.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|42143|emb|CAA25199.1| unnamed protein product [Escherichia coli]
 gi|169753506|gb|ACA76205.1| protein of unknown function DUF150 [Escherichia coli ATCC 8739]
 gi|209913906|dbj|BAG78980.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|215266560|emb|CAS10999.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|253323038|gb|ACT27640.1| protein of unknown function DUF150 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|257755948|dbj|BAI27450.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257761132|dbj|BAI32629.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|257766278|dbj|BAI37773.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|260447801|gb|ACX38223.1| protein of unknown function DUF150 [Escherichia coli DH1]
 gi|281180214|dbj|BAI56544.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|284923194|emb|CBG36288.1| conserved hypothetical protein [Escherichia coli 042]
 gi|299879880|gb|EFI88091.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|300300130|gb|EFJ56515.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300308214|gb|EFJ62734.1| hypothetical protein HMPREF9553_01175 [Escherichia coli MS 200-1]
 gi|300317389|gb|EFJ67173.1| hypothetical protein HMPREF9547_01616 [Escherichia coli MS 175-1]
 gi|300358364|gb|EFJ74234.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300397740|gb|EFJ81278.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300403707|gb|EFJ87245.1| hypothetical protein HMPREF9536_02438 [Escherichia coli MS 84-1]
 gi|300407078|gb|EFJ90616.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|300413951|gb|EFJ97261.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300417856|gb|EFK01167.1| hypothetical protein HMPREF9548_04117 [Escherichia coli MS 182-1]
 gi|300451709|gb|EFK15329.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300456940|gb|EFK20433.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300462222|gb|EFK25715.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300523635|gb|EFK44704.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300529876|gb|EFK50938.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300842755|gb|EFK70515.1| hypothetical protein HMPREF9347_00334 [Escherichia coli MS 124-1]
 gi|300846896|gb|EFK74656.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|301076826|gb|EFK91632.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|305850051|gb|EFM50510.1| hypothetical protein ECNC101_07709 [Escherichia coli NC101]
 gi|307625229|gb|ADN69533.1| hypothetical protein UM146_00520 [Escherichia coli UM146]
 gi|308122705|gb|EFO59967.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|308926617|gb|EFP72093.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|310332499|gb|EFP99712.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|312947729|gb|ADR28556.1| hypothetical protein NRG857_15730 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315062478|gb|ADT76805.1| conserved hypothetical protein [Escherichia coli W]
 gi|315257096|gb|EFU37064.1| 15 kDa protein [Escherichia coli MS 85-1]
 gi|315288928|gb|EFU48326.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|315294915|gb|EFU54254.1| conserved hypothetical protein [Escherichia coli MS 153-1]
 gi|315297878|gb|EFU57148.1| conserved hypothetical protein [Escherichia coli MS 16-3]
 gi|320175534|gb|EFW50630.1| hypothetical protein SDB_01982 [Shigella dysenteriae CDC 74-1112]
 gi|320189524|gb|EFW64183.1| hypothetical protein ECoD_04531 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320202084|gb|EFW76659.1| hypothetical protein ECoL_00712 [Escherichia coli EC4100B]
 gi|320640242|gb|EFX09814.1| ribosome maturation protein RimP [Escherichia coli O157:H7 str.
           G5101]
 gi|320645539|gb|EFX14548.1| ribosome maturation protein RimP [Escherichia coli O157:H- str.
           493-89]
 gi|320650849|gb|EFX19306.1| ribosome maturation protein RimP [Escherichia coli O157:H- str. H
           2687]
 gi|320656230|gb|EFX24142.1| ribosome maturation protein RimP [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661920|gb|EFX29328.1| ribosome maturation protein RimP [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666755|gb|EFX33734.1| ribosome maturation protein RimP [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323154384|gb|EFZ40585.1| hypothetical protein ECEPECA14_3686 [Escherichia coli EPECa14]
 gi|323173569|gb|EFZ59198.1| hypothetical protein ECLT68_1886 [Escherichia coli LT-68]
 gi|323178883|gb|EFZ64459.1| hypothetical protein ECOK1180_2616 [Escherichia coli 1180]
 gi|323183125|gb|EFZ68523.1| hypothetical protein ECOK1357_3540 [Escherichia coli 1357]
 gi|324008769|gb|EGB77988.1| hypothetical protein HMPREF9532_01528 [Escherichia coli MS 57-2]
 gi|324012104|gb|EGB81323.1| hypothetical protein HMPREF9533_03857 [Escherichia coli MS 60-1]
 gi|324018306|gb|EGB87525.1| hypothetical protein HMPREF9542_03022 [Escherichia coli MS 117-3]
 gi|326337872|gb|EGD61706.1| hypothetical protein ECF_05498 [Escherichia coli O157:H7 str. 1125]
 gi|326347441|gb|EGD71166.1| hypothetical protein ECoA_00752 [Escherichia coli O157:H7 str.
           1044]
 gi|330909226|gb|EGH37740.1| clustered with transcription termination protein NusA [Escherichia
           coli AA86]
 gi|332086489|gb|EGI91636.1| hypothetical protein SD15574_3713 [Shigella dysenteriae 155-74]
 gi|332345127|gb|AEE58461.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|332754726|gb|EGJ85092.1| hypothetical protein SF274771_3795 [Shigella flexneri 2747-71]
 gi|332765167|gb|EGJ95394.1| ribosome maturation protein [Shigella flexneri 2930-71]
 gi|332998812|gb|EGK18408.1| hypothetical protein SFVA6_4094 [Shigella flexneri VA-6]
 gi|332999249|gb|EGK18835.1| hypothetical protein SFK272_3978 [Shigella flexneri K-272]
 gi|333000398|gb|EGK19981.1| hypothetical protein SFK218_4200 [Shigella flexneri K-218]
 gi|333014539|gb|EGK33886.1| hypothetical protein SFK304_4023 [Shigella flexneri K-304]
          Length = 140

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 1/107 (0%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I  
Sbjct: 2   ITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPITV 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 61  AYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 107


>gi|259586205|sp|Q2NW25|RIMP_SODGM RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V I  +  +   L+I++  D+G +T+ DC ++S  +S +LDVE+
Sbjct: 10  LTEMITAPVEALGFELVGIEFIRGRQSTLRIYINSDEG-ITVDDCADVSHQVSAVLDVED 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+   + + ++ G  V+  + ++  +++K  G I
Sbjct: 69  PISVAYSLEVSSPGLDRPLFTAAHYRQFIGSDVSVVLRIAVQNRRKWQGII 119


>gi|161984849|ref|YP_409537.2| hypothetical protein SBO_3212 [Shigella boydii Sb227]
          Length = 150

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V I  +      L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 8   LTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 117


>gi|258620311|ref|ZP_05715349.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258624682|ref|ZP_05719616.1| UPF0090 protein [Vibrio mimicus VM603]
 gi|262163945|ref|ZP_06031684.1| UPF0090 domain-containing protein [Vibrio mimicus VM223]
 gi|262172283|ref|ZP_06039961.1| UPF0090 domain-containing protein [Vibrio mimicus MB-451]
 gi|258582969|gb|EEW07784.1| UPF0090 protein [Vibrio mimicus VM603]
 gi|258587190|gb|EEW11901.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|261893359|gb|EEY39345.1| UPF0090 domain-containing protein [Vibrio mimicus MB-451]
 gi|262027473|gb|EEY46139.1| UPF0090 domain-containing protein [Vibrio mimicus VM223]
          Length = 151

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G +T+ DC E+S+ +S +LDVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHENG-ITVEDCAEVSRQVSAVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++  +++K  G I
Sbjct: 96  IGHEVSIVLKMAVANRRKWKGII 118


>gi|253991504|ref|YP_003042860.1| hypothetical protein PAU_04031 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638382|emb|CAR67004.1| Conserved Hypothetical Protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782954|emb|CAQ86119.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 152

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 72/120 (60%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++++I   +E + F  V +  +  +   L+I+++ ++G +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDSENG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LE+SSPG++RP+     + R+ G  V+  + L+  +++K +G I
Sbjct: 60  VSAVLDVEDPISVLYNLEISSPGLERPLFTAEHYQRFIGEEVSLVLRLAMQNRRKWLGVI 119


>gi|237730090|ref|ZP_04560571.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908696|gb|EEH94614.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 163

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 21  LTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVED 79

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     ++R+ G  V   + ++  +++K  G I
Sbjct: 80  PITVAYNLEVSSPGLDRPLFTAEHYVRFLGEEVTLVLRMAVQNRRKWQGVI 130


>gi|323491075|ref|ZP_08096267.1| ribosome maturation protein RimP [Vibrio brasiliensis LMG 20546]
 gi|323314739|gb|EGA67811.1| ribosome maturation protein RimP [Vibrio brasiliensis LMG 20546]
          Length = 151

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G + + DC E+S+ +S ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHENG-INVEDCAEVSRQVSAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 96  IGHEVSIVLKMAVGNRRKWKGII 118


>gi|261212248|ref|ZP_05926534.1| UPF0090 domain-containing protein [Vibrio sp. RC341]
 gi|260838856|gb|EEX65507.1| UPF0090 domain-containing protein [Vibrio sp. RC341]
          Length = 151

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 58/85 (68%), Gaps = 1/85 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G +T+ DC E+S+ +S +LDVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHENG-ITVEDCAEVSRQVSAVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMG 137
            GH V+  + ++  +++K  G I  
Sbjct: 96  IGHEVSIVLKMAVANRRKWKGFIQA 120


>gi|162382799|ref|YP_454055.2| hypothetical protein SG0375 [Sodalis glossinidius str. 'morsitans']
          Length = 150

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V I  +  +   L+I++  D+G +T+ DC ++S  +S +LDVE+
Sbjct: 8   LTEMITAPVEALGFELVGIEFIRGRQSTLRIYINSDEG-ITVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+   + + ++ G  V+  + ++  +++K  G I
Sbjct: 67  PISVAYSLEVSSPGLDRPLFTAAHYRQFIGSDVSVVLRIAVQNRRKWQGII 117


>gi|157414451|ref|YP_001481707.1| hypothetical protein C8J_0131 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|205425409|sp|A8FJU3|RIMP_CAMJ8 RecName: Full=Ribosome maturation factor rimP
 gi|157385415|gb|ABV51730.1| hypothetical protein C8J_0131 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|315931533|gb|EFV10500.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 140

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K   KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELVK----ITTNEKEKFEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135

Query: 172 LIV 174
             V
Sbjct: 136 TFV 138


>gi|126664887|ref|ZP_01735871.1| hypothetical protein MELB17_03575 [Marinobacter sp. ELB17]
 gi|126631213|gb|EBA01827.1| hypothetical protein MELB17_03575 [Marinobacter sp. ELB17]
          Length = 153

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 67/114 (58%), Gaps = 1/114 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++PV+E + +    I      +  LL++F++  +  + + DCE++S+ +S ++DVE
Sbjct: 8   LEDILRPVVEGLGYEYWGIEFRARGHESLLRLFIDDVEKGIGIEDCEKVSRQVSSVMDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + I+  Y LEVSSPG+DRP+   + +  + GH V   + ++   ++K  G + G
Sbjct: 68  DPIQSEYTLEVSSPGMDRPLFELAQYQAFVGHKVQIRLRMAFEGRRKFQGLLNG 121


>gi|148270199|ref|YP_001244659.1| hypothetical protein Tpet_1066 [Thermotoga petrophila RKU-1]
 gi|166977875|sp|A5ILL0|RIMP_THEP1 RecName: Full=Ribosome maturation factor rimP
 gi|147735743|gb|ABQ47083.1| protein of unknown function DUF150 [Thermotoga petrophila RKU-1]
          Length = 150

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 4/104 (3%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E +  +L+I ++   G +++RDCE  S+ I   LD E++IE  Y LEVSSPG+DRP+   
Sbjct: 33  ESRGWVLRIIIDNPVGYVSVRDCELFSREIERFLDREDLIEHSYTLEVSSPGLDRPLRGP 92

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            D++R+ G +      + + D +  IG+I    +    +  EKR
Sbjct: 93  KDYVRFTGKLAK----IVTKDGKTFIGRIESFVDGTITISDEKR 132


>gi|148926309|ref|ZP_01809993.1| hypothetical protein Cj8486_0133 [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145844701|gb|EDK21806.1| hypothetical protein Cj8486_0133 [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 140

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K+  KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELVK----ITTNEKEKIEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135

Query: 172 LIV 174
             +
Sbjct: 136 TFI 138


>gi|34581536|ref|ZP_00143016.1| hypothetical protein [Rickettsia sibirica 246]
 gi|229586875|ref|YP_002845376.1| hypothetical protein RAF_ORF0746 [Rickettsia africae ESF-5]
 gi|259586186|sp|C3PNX3|RIMP_RICAE RecName: Full=Ribosome maturation factor rimP
 gi|28262921|gb|EAA26425.1| unknown [Rickettsia sibirica 246]
 gi|228021925|gb|ACP53633.1| Unknown [Rickettsia africae ESF-5]
          Length = 161

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 9/160 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVE 83
           I++VI+  + +M F  V +        +++I ++  +   +++ DC + S+ IS ILDVE
Sbjct: 8   IANVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNSEKISVEDCTKASRTISAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++IE  Y LEV+S G++RP+V+  ++ R+    V   +      K +  GKI+       
Sbjct: 68  DLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKITLKELLNGKTRYQGKIIKAENNKI 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +L+ E        E ++ I +D + +A L++T+E+ +  L
Sbjct: 128 YLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLL 159


>gi|262401661|ref|ZP_06078227.1| UPF0090 domain-containing protein [Vibrio sp. RC586]
 gi|262352078|gb|EEZ01208.1| UPF0090 domain-containing protein [Vibrio sp. RC586]
          Length = 151

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G +T+ DC E+S+ +S +LDVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHENG-ITVEDCAEVSRQVSAVLDVEDPISVVYNLEVSSPGLERPLFKPAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++  +++K  G I
Sbjct: 96  IGHEVSIVLKMAVANRRKWKGII 118


>gi|283955583|ref|ZP_06373077.1| hypothetical protein C1336_000030016 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792926|gb|EFC31701.1| hypothetical protein C1336_000030016 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 140

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K   KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELVK----ITANEKEKFEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135

Query: 172 LIV 174
             V
Sbjct: 136 TFV 138


>gi|229019011|ref|ZP_04175853.1| hypothetical protein bcere0030_35250 [Bacillus cereus AH1273]
 gi|229025257|ref|ZP_04181677.1| hypothetical protein bcere0029_35590 [Bacillus cereus AH1272]
 gi|228736010|gb|EEL86585.1| hypothetical protein bcere0029_35590 [Bacillus cereus AH1272]
 gi|228742339|gb|EEL92497.1| hypothetical protein bcere0030_35250 [Bacillus cereus AH1273]
          Length = 156

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 12/155 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +S+ +S  LD E
Sbjct: 9   VEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VDIEECGAVSERLSEALDKE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM---GTSE 140
           + I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++   GT+ 
Sbjct: 68  DPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKLLSYDGTTI 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           T     K ++ E       I I  D + +ARL VT
Sbjct: 128 TLLLTIKTRKKE-------IQIPMDKVANARLAVT 155


>gi|15599940|ref|NP_253434.1| hypothetical protein PA4746 [Pseudomonas aeruginosa PAO1]
 gi|107103845|ref|ZP_01367763.1| hypothetical protein PaerPA_01004916 [Pseudomonas aeruginosa PACS2]
 gi|116052893|ref|YP_793210.1| hypothetical protein PA14_62780 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152986446|ref|YP_001350788.1| hypothetical protein PSPA7_5464 [Pseudomonas aeruginosa PA7]
 gi|218893841|ref|YP_002442710.1| hypothetical protein PLES_51311 [Pseudomonas aeruginosa LESB58]
 gi|254238518|ref|ZP_04931841.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254244352|ref|ZP_04937674.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296391573|ref|ZP_06881048.1| hypothetical protein PaerPAb_25623 [Pseudomonas aeruginosa PAb1]
 gi|313109727|ref|ZP_07795667.1| hypothetical protein PA39016_002040024 [Pseudomonas aeruginosa
           39016]
 gi|34223065|sp|Q9HV53|RIMP_PSEAE RecName: Full=Ribosome maturation factor rimP
 gi|122257096|sp|Q02FS6|RIMP_PSEAB RecName: Full=Ribosome maturation factor rimP
 gi|167013034|sp|A6VCK3|RIMP_PSEA7 RecName: Full=Ribosome maturation factor rimP
 gi|226707668|sp|B7V1F8|RIMP_PSEA8 RecName: Full=Ribosome maturation factor rimP
 gi|9951008|gb|AAG08132.1|AE004888_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115588114|gb|ABJ14129.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170449|gb|EAZ55960.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126197730|gb|EAZ61793.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|150961604|gb|ABR83629.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
 gi|218774069|emb|CAW29885.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
 gi|310882169|gb|EFQ40763.1| hypothetical protein PA39016_002040024 [Pseudomonas aeruginosa
           39016]
          Length = 152

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 2/117 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + +    +  + + ++ +L+++++R +G + + DCE +S+ +S ILDVE
Sbjct: 8   LQALLAPVVEALGYECWGVEFISQGRHSVLRVYIDRPEG-ILIDDCEAVSRQVSGILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           + I G Y LEVSSPG+DRP+     F +  G  V   +      ++   G + G  E
Sbjct: 67  DPISGEYTLEVSSPGMDRPLFTLEQFAKHAGEQVKIRLRSPYEGRRNYQGILRGVEE 123


>gi|331090929|ref|ZP_08339771.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405151|gb|EGG84687.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 155

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%)

Query: 31  PVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P++EE  F  V +  ++E     L+ ++++  G + + DCE +S+A S ILD ++ IE  
Sbjct: 17  PIVEEHGFELVDVEYVKEGGTWYLRAYIDKP-GGIAVDDCEVVSRAFSDILDEKDYIEDT 75

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++ +G + G  +    +E E 
Sbjct: 76  YIFEVSSPGLGRPLKKEKDFARSMGEEVEVRTYRAIDRQKEFVGILKGYDKNTVTIEMED 135

Query: 150 RGEKDMNELQIAI 162
             E+      IA+
Sbjct: 136 GSERIFERNDIAL 148


>gi|73662812|ref|YP_301593.1| hypothetical protein SSP1503 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582354|sp|Q49X50|RIMP_STAS1 RecName: Full=Ribosome maturation factor rimP
 gi|72495327|dbj|BAE18648.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 155

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 8/149 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++IQPV+ +++F  V++   +E K+  L++ ++++ G + L DC   S+ IS ++D E
Sbjct: 8   VETIIQPVLNDLNFELVEVEFTKEGKDHFLRVSIDKE-GGVDLNDCALASEKISEVMDAE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+  Y L+V+SPG +RP+ ++ DF       V   +       ++ +G +    ET  
Sbjct: 67  DPIQEMYYLDVASPGAERPIKKEKDFQNAITKPVFVSLYAPIEGSKEWLGILQSVDETNI 126

Query: 144 FLE-KEKRGEKDMNELQIAISFDSLLSAR 171
            +E KEK   K     QI I  + +  AR
Sbjct: 127 VMEVKEKAKTK-----QIEIPRNKIAKAR 150


>gi|148825865|ref|YP_001290618.1| hypothetical protein CGSHiEE_04150 [Haemophilus influenzae PittEE]
 gi|229846822|ref|ZP_04466929.1| hypothetical protein CGSHi7P49H1_02333 [Haemophilus influenzae
           7P49H1]
 gi|167012908|sp|A5UBT4|RIMP_HAEIE RecName: Full=Ribosome maturation factor rimP
 gi|148716025|gb|ABQ98235.1| hypothetical protein CGSHiEE_04150 [Haemophilus influenzae PittEE]
 gi|229810311|gb|EEP46030.1| hypothetical protein CGSHi7P49H1_02333 [Haemophilus influenzae
           7P49H1]
 gi|309973010|gb|ADO96211.1| 30S ribosomal maturation protein RimP [Haemophilus influenzae
           R2846]
          Length = 151

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F+++D G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 35  MTVRLFIDKD-GGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLPQFE 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +A  + +   +++K  GK+
Sbjct: 94  RYIGQDIAVHLRIPVMERRKWQGKL 118


>gi|167746759|ref|ZP_02418886.1| hypothetical protein ANACAC_01471 [Anaerostipes caccae DSM 14662]
 gi|167653719|gb|EDR97848.1| hypothetical protein ANACAC_01471 [Anaerostipes caccae DSM 14662]
          Length = 171

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 3/126 (2%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNM 64
           F   + +  + G   +      ++ P+I+E  F  V +  ++E  N  L+I+ ++D G +
Sbjct: 9   FAQKRRQGNLAGKAEIEQKTEELVTPIIDENHFELVDVEYVKEGANWYLRIYADKD-GGI 67

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           ++ DC  +S+A+   LD ++ I+  Y LEVSSPG+ RP+ ++ D+ R  G  V  ++   
Sbjct: 68  SIDDCVLISRALEAKLDADDFIKDAYILEVSSPGLGRPLKKEKDYQRSIGQSVDIKL-YK 126

Query: 125 SGDKQK 130
           + DKQK
Sbjct: 127 AIDKQK 132


>gi|90581551|ref|ZP_01237344.1| hypothetical protein VAS14_07344 [Vibrio angustum S14]
 gi|90437313|gb|EAS62511.1| hypothetical protein VAS14_07344 [Vibrio angustum S14]
          Length = 151

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 72/120 (60%), Gaps = 2/120 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +++P +  + +  V +  +   ++  L++F++ ++G + + DC E+S+ IS 
Sbjct: 3   ALETQLTEMLEPSVLALGYELVGLEFIRAGEHSTLRVFIDHENG-INVDDCAEVSRQISA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH     + ++ G+++K  G I+  
Sbjct: 62  VMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEANIVLKMAMGNRRKWKGDIVAV 121


>gi|289423156|ref|ZP_06424971.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
 gi|289156487|gb|EFD05137.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
          Length = 154

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 65/99 (65%), Gaps = 2/99 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISP 78
            +A  +  ++QP+ +   F  V +  ++E  +  L++ ++ +DG + L +CE++S+ ++P
Sbjct: 4   NIAQQVEKLVQPIADLYGFELVDVEYVKEAGIYYLRVIIDSEDG-IGLDECEKVSRDLNP 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           ILD +++IE +Y LEV SPGIDR + R  ++ +++G +V
Sbjct: 63  ILDEKDMIEENYLLEVCSPGIDRILKRDHEYEKYSGKLV 101


>gi|160932905|ref|ZP_02080294.1| hypothetical protein CLOLEP_01746 [Clostridium leptum DSM 753]
 gi|156867979|gb|EDO61351.1| hypothetical protein CLOLEP_01746 [Clostridium leptum DSM 753]
          Length = 167

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 6/128 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +  + +P++++       +  L+E     L+++++R +G +T+ DCE +S+AI  
Sbjct: 9   GTVEAVWDLCEPIVKDFGLELWDVRYLKEGAQWYLRVYIDRQEG-VTIEDCENVSRAIDE 67

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV--LSSGDKQKLIGKIM 136
            LD  + ++  Y LEV SPG++R +VR   F R+ G  V  +++  L SG+++     ++
Sbjct: 68  PLDRLDPVDQSYCLEVCSPGLERELVRPEHFQRFEGWPVMVKLIRPLDSGERE--FNGVL 125

Query: 137 GTSETGFF 144
           GT E G F
Sbjct: 126 GTYENGVF 133


>gi|30995436|ref|NP_439434.2| hypothetical protein HI1282 [Haemophilus influenzae Rd KW20]
 gi|145633249|ref|ZP_01788980.1| hypothetical protein CGSHi3655_03431 [Haemophilus influenzae 3655]
 gi|145634373|ref|ZP_01790083.1| hypothetical protein CGSHiAA_06269 [Haemophilus influenzae PittAA]
 gi|148827022|ref|YP_001291775.1| hypothetical protein CGSHiGG_01570 [Haemophilus influenzae PittGG]
 gi|229845093|ref|ZP_04465228.1| hypothetical protein CGSHi6P18H1_00035 [Haemophilus influenzae
           6P18H1]
 gi|260581404|ref|ZP_05849218.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|260582502|ref|ZP_05850293.1| conserved hypothetical protein [Haemophilus influenzae NT127]
 gi|329123361|ref|ZP_08251926.1| YhbC family protein [Haemophilus aegyptius ATCC 11116]
 gi|34223728|sp|P45138|RIMP_HAEIN RecName: Full=Ribosome maturation factor rimP
 gi|166979796|sp|A5UF36|RIMP_HAEIG RecName: Full=Ribosome maturation factor rimP
 gi|144986095|gb|EDJ92685.1| hypothetical protein CGSHi3655_03431 [Haemophilus influenzae 3655]
 gi|145268353|gb|EDK08347.1| hypothetical protein CGSHiAA_06269 [Haemophilus influenzae PittAA]
 gi|148718264|gb|ABQ99391.1| hypothetical protein CGSHiGG_01570 [Haemophilus influenzae PittGG]
 gi|229811929|gb|EEP47623.1| hypothetical protein CGSHi6P18H1_00035 [Haemophilus influenzae
           6P18H1]
 gi|260091946|gb|EEW75895.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|260094482|gb|EEW78379.1| conserved hypothetical protein [Haemophilus influenzae NT127]
 gi|327471361|gb|EGF16813.1| YhbC family protein [Haemophilus aegyptius ATCC 11116]
          Length = 151

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F+++D G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 35  MTVRLFIDKD-GGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLPQFE 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +A  + +   +++K  GK+
Sbjct: 94  RYIGQDIAVHLRIPVMERRKWQGKL 118


>gi|145637798|ref|ZP_01793447.1| hypothetical protein CGSHiHH_01594 [Haemophilus influenzae PittHH]
 gi|145268991|gb|EDK08945.1| hypothetical protein CGSHiHH_01594 [Haemophilus influenzae PittHH]
          Length = 151

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F+++D G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 35  MTVRLFIDKD-GGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLPQFE 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +A  + +   +++K  GK+
Sbjct: 94  RYIGQDIAVHLRIPVMERRKWQGKL 118


>gi|153876665|ref|ZP_02003868.1| Protein of unknown function DUF150 [Beggiatoa sp. PS]
 gi|152066871|gb|EDN66132.1| Protein of unknown function DUF150 [Beggiatoa sp. PS]
          Length = 144

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +  ++ P+I  + +  V +  L   + LL+++++   G + L DCE +S  +S +L
Sbjct: 2   LDNQLQQLLAPIIIGLGYELVGVERLS--STLLRVYIDHPKG-INLSDCERVSYQVSGVL 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           DV+N I+G Y LEVSSPG DRP+     F R+ GH V   +
Sbjct: 59  DVQNPIKGRYTLEVSSPGWDRPLFTLEHFKRFVGHKVKVSL 99


>gi|332295449|ref|YP_004437372.1| Ribosome maturation factor rimP [Thermodesulfobium narugense DSM
           14796]
 gi|332178552|gb|AEE14241.1| Ribosome maturation factor rimP [Thermodesulfobium narugense DSM
           14796]
          Length = 159

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 9/145 (6%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++++ V+ ++ F    +   ++ K  +L++F++  +  ++L DCE +S+ +S ILD  ++
Sbjct: 12  NIVEKVLLDIGFELYDLEYFKQGKRWILRVFIDNLEKPISLDDCELVSKKLSAILDYYDL 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I   + LEVSSPGI+R + + SDF R+ G  +   ++    +   +IG + G    G ++
Sbjct: 72  IPESFYLEVSSPGIERKLKKDSDFTRFKGEEII--VIFQKPNISPIIGILEGIDSDGNYI 129

Query: 146 ------EKEKRGEKDMNELQIAISF 164
                  KEK    D+ E++I   F
Sbjct: 130 IVNTGKSKEKINRNDVKEVRIHFRF 154


>gi|296113982|ref|YP_003627920.1| hypothetical protein MCR_1770 [Moraxella catarrhalis RH4]
 gi|295921676|gb|ADG62027.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
 gi|326559306|gb|EGE09733.1| hypothetical protein E9G_09360 [Moraxella catarrhalis 7169]
 gi|326564318|gb|EGE14548.1| hypothetical protein E9K_04722 [Moraxella catarrhalis 103P14B1]
 gi|326568243|gb|EGE18325.1| hypothetical protein E9U_09405 [Moraxella catarrhalis BC8]
 gi|326569944|gb|EGE19991.1| hypothetical protein E9Q_01306 [Moraxella catarrhalis BC1]
 gi|326570022|gb|EGE20068.1| hypothetical protein E9S_06263 [Moraxella catarrhalis BC7]
 gi|326573672|gb|EGE23630.1| hypothetical protein EA1_08342 [Moraxella catarrhalis O35E]
 gi|326574705|gb|EGE24641.1| hypothetical protein E9Y_05110 [Moraxella catarrhalis 101P30B1]
          Length = 165

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 18/165 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDG-NMTLRDCEELSQA 75
            +++ +I P +         I  + + +  LL+I++E     R  G ++T+ DC  ++  
Sbjct: 8   AELTELIAPAVAACGVDLWGIEFMPQGRKSLLRIYIESLPENRAAGEHVTIEDCSAVNHQ 67

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV--LSSGD--KQKL 131
           +S +LDV + I G Y LEVSSPG DRP+  +     + G  +   ++  + SGD  ++K+
Sbjct: 68  VSGVLDVHDPIAGEYVLEVSSPGFDRPLFTREQVAAYVGETINLRLIHAIGSGDTKRRKV 127

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +G++    E    +  E       ++L+  I+FDS+  A L+  D
Sbjct: 128 VGRLTCVGEDSMTVITE-------DKLEFNIAFDSVDKAHLVYED 165


>gi|261253852|ref|ZP_05946425.1| UPF0090 domain-containing protein [Vibrio orientalis CIP 102891]
 gi|260937243|gb|EEX93232.1| UPF0090 domain-containing protein [Vibrio orientalis CIP 102891]
          Length = 151

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++ ++G + + DC E+S+ +S ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHENG-INVDDCAEVSRQVSAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 96  IGHEVSIVLKMAVGNRRKWKGVI 118


>gi|170765477|ref|ZP_02900288.1| conserved hypothetical protein [Escherichia albertii TW07627]
 gi|170124623|gb|EDS93554.1| conserved hypothetical protein [Escherichia albertii TW07627]
          Length = 150

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 8   LTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 66

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G      + ++  +++K  G I
Sbjct: 67  PITVAYNLEVSSPGLDRPLFTAEHYARFVGEEATLVLRMAVQNRRKWQGVI 117


>gi|254721997|ref|ZP_05183786.1| hypothetical protein BantA1_05952 [Bacillus anthracis str. A1055]
          Length = 156

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 12/155 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +S+ +S  LD E
Sbjct: 9   VEAFAQPIVEELNLEFVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAVSERLSEALDKE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM---GTSE 140
           + I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++   GT+ 
Sbjct: 68  DPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKMLSYDGTTI 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           T     K ++ E       I I  D + +ARL VT
Sbjct: 128 TLLLTIKTRKKE-------IQIPMDKVANARLAVT 155


>gi|85712988|ref|ZP_01044026.1| Alpha-hemolysin-like protein, hlyA family protein [Idiomarina
           baltica OS145]
 gi|85693157|gb|EAQ31117.1| Alpha-hemolysin-like protein, hlyA family protein [Idiomarina
           baltica OS145]
          Length = 167

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 67/114 (58%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S +++P +E + F    I  +   K   L+I++++++G +++ DC ++S  +S +LDVE
Sbjct: 23  LSDMLRPAVEALGFELWGIEFVRAGKFSTLRIYIDKEEG-ISVDDCADVSYQVSSVLDVE 81

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + I   Y LEVSSPG++RP    +    + G  VA E+ ++  +K+K    + G
Sbjct: 82  DPINTEYNLEVSSPGMERPFFSIAQMQPYIGETVAFELTVAKQNKRKFQAVLEG 135


>gi|326572880|gb|EGE22865.1| hypothetical protein E9W_08250 [Moraxella catarrhalis CO72]
          Length = 165

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 18/165 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDG-NMTLRDCEELSQA 75
            +++ +I P +         I  + + +  LL+I++E     R  G ++T+ DC  ++  
Sbjct: 8   AELTELITPAVAACGVDLWGIEFMPQGRKSLLRIYIESLPENRAAGEHVTIEDCSAVNHQ 67

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV--LSSGD--KQKL 131
           +S +LDV + I G Y LEVSSPG DRP+  +     + G  +   ++  + SGD  ++K+
Sbjct: 68  VSGVLDVHDPIAGEYVLEVSSPGFDRPLFTREQVAAYVGETINLRLIHAIGSGDTKRRKV 127

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +G++    E    +  E       ++L+  I+FDS+  A L+  D
Sbjct: 128 VGRLTCVGEDSMTVITE-------DKLEFNIAFDSVDKAHLVYED 165


>gi|227357077|ref|ZP_03841447.1| YhbC family protein [Proteus mirabilis ATCC 29906]
 gi|227162769|gb|EEI47732.1| YhbC family protein [Proteus mirabilis ATCC 29906]
          Length = 170

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 75/129 (58%), Gaps = 5/129 (3%)

Query: 11  YEPRIF----GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           Y+P  +    G   L   +++++   +E + F  V +  +  +   L+I+++ ++G +T+
Sbjct: 10  YKPFFYALGVGLSTLEQKLTAMVSAPVEALGFEFVGLEFIRGRVSTLRIYIDSEEG-ITV 68

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DC ++S  +S +LDVE+ I+  Y LE+SSPG++RP+   + + ++ G  VA  + ++  
Sbjct: 69  DDCADVSHQVSAVLDVEDPIQTFYNLEISSPGLERPLFTTTHYEQFIGEEVAVVLRIAMQ 128

Query: 127 DKQKLIGKI 135
           +++K  G I
Sbjct: 129 NRRKWQGII 137


>gi|145630837|ref|ZP_01786615.1| hypothetical protein CGSHi22421_10572 [Haemophilus influenzae
           R3021]
 gi|144983719|gb|EDJ91179.1| hypothetical protein CGSHi22421_10572 [Haemophilus influenzae
           R3021]
          Length = 151

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F+++D G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 35  ITVRLFIDKD-GGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLPQFE 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +A  + +   +++K  GK+
Sbjct: 94  RYIGQDIAVHLRIPVMERRKWQGKL 118


>gi|319896983|ref|YP_004135178.1| hypothetical protein HIBPF06790 [Haemophilus influenzae F3031]
 gi|317432487|emb|CBY80844.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 141

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F+++D G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 25  MTVRLFIDKD-GGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLPQFE 83

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +A  + +   +++K  GK+
Sbjct: 84  RYIGQDIAVHLRIPVMERRKWQGKL 108


>gi|270265057|ref|ZP_06193320.1| putative cytoplasmic protein [Serratia odorifera 4Rx13]
 gi|270040991|gb|EFA14092.1| putative cytoplasmic protein [Serratia odorifera 4Rx13]
          Length = 150

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           DVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 63  DVEEPITVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGII 117


>gi|332290218|ref|YP_004421070.1| hypothetical protein UMN179_02160 [Gallibacterium anatis UMN179]
 gi|330433114|gb|AEC18173.1| hypothetical protein UMN179_02160 [Gallibacterium anatis UMN179]
          Length = 153

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 68/113 (60%), Gaps = 2/113 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++QP +E+M F  + I      +   +++++++++G +T+ DC ++S+ +  ILDVE
Sbjct: 8   LQDLLQPTVEDMGFELLGIECTRAGRYSTVRLYIDKENG-VTIDDCSDVSREVGAILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           + I   Y LEVSSPG+DRP+   + + R+ G  V   + ++   ++K  G ++
Sbjct: 67  DPISDKYNLEVSSPGLDRPLFTLAHYQRFVGEEVVIHLRIAMSGRRKWQGDLI 119


>gi|218898969|ref|YP_002447380.1| hypothetical protein BCG9842_B1329 [Bacillus cereus G9842]
 gi|226695927|sp|B7IUH5|RIMP_BACC2 RecName: Full=Ribosome maturation factor rimP
 gi|218540973|gb|ACK93367.1| conserved hypothetical protein [Bacillus cereus G9842]
 gi|326941583|gb|AEA17479.1| hypothetical protein CT43_CH3814 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 156

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 12/155 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +S+ +S  LD E
Sbjct: 9   VEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAVSERLSEALDKE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM---GTSE 140
           + I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++   GT+ 
Sbjct: 68  DPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKLLSYDGTTI 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           T     K ++ E       I I  D + +ARL VT
Sbjct: 128 TLLLTIKTRKKE-------IQIPMDKVANARLAVT 155


>gi|291616008|ref|YP_003518750.1| YhbC [Pantoea ananatis LMG 20103]
 gi|291151038|gb|ADD75622.1| YhbC [Pantoea ananatis LMG 20103]
 gi|327396259|dbj|BAK13681.1| hypothetical UPF0090 protein YhbC [Pantoea ananatis AJ13355]
          Length = 154

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 12  LTELVSAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I
Sbjct: 71  PITVPYHLEVSSPGLDRPLFTAEHYARFTGDEVSLVLRMAVQNRRKWQGII 121


>gi|121613126|ref|YP_999862.1| hypothetical protein CJJ81176_0173 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167004833|ref|ZP_02270591.1| hypothetical protein Cjejjejuni_00785 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|166980215|sp|A1VXM1|RIMP_CAMJJ RecName: Full=Ribosome maturation factor rimP
 gi|87250144|gb|EAQ73102.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 140

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K   KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELVK----ITTNEKEKFEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135

Query: 172 LIV 174
             +
Sbjct: 136 TFI 138


>gi|319776226|ref|YP_004138714.1| hypothetical protein HICON_18130 [Haemophilus influenzae F3047]
 gi|1574740|gb|AAC22931.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|317450817|emb|CBY87039.1| conserved hypothetical protein [Haemophilus influenzae F3047]
          Length = 141

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F+++D G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 25  MTVRLFIDKD-GGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLPQFE 83

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +A  + +   +++K  GK+
Sbjct: 84  RYIGQDIAVHLRIPVMERRKWQGKL 108


>gi|169827164|ref|YP_001697322.1| hypothetical protein Bsph_1594 [Lysinibacillus sphaericus C3-41]
 gi|226734725|sp|B1HR01|RIMP_LYSSC RecName: Full=Ribosome maturation factor rimP
 gi|168991652|gb|ACA39192.1| UPF0090 protein [Lysinibacillus sphaericus C3-41]
          Length = 156

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 5/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  + +P+++E++   V I  ++E +N  L+++V+  +G + +  C ++S+ +S +LD +
Sbjct: 8   IEELAKPIVDELNLELVDIEFVKEGRNWFLRVYVDTPEGGIDIDQCAQVSERLSLLLDEK 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ + +DF +  G  +  +      D ++  G +    E   
Sbjct: 68  DPITQNYYLEVSSPGAERPLKKDADFEKAIGKFIYVKTYKPIKDMKEFQGYLTSYEEHTL 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E   +  K    + + I  + +  ARL +
Sbjct: 128 VMEVRIKTRK----ITVTIEQEKIALARLAI 154


>gi|19705319|ref|NP_602814.1| putative cytoplasmic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|34223125|sp|Q8RHJ4|RIMP_FUSNN RecName: Full=Ribosome maturation factor rimP
 gi|19713290|gb|AAL94113.1| Hypothetical cytosolic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 156

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 78/141 (55%), Gaps = 8/141 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I     VE
Sbjct: 11  ITRIVNPFIEEMNLSLVDVEYVQDGGYWYVRIFIENLNGDLNIEDCSKLSSKIED--KVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK---LIGKIMGTSE 140
            +IE  + LEVSSPG++RP+ +  D+ R+ G  +   +     DK++   +I ++ G  +
Sbjct: 69  ELIEHKFFLEVSSPGLERPLKKLEDYTRFIGEKITLHLKHKLDDKKQFKTIIKEVNG--D 126

Query: 141 TGFFLEKEKRGEKDMNELQIA 161
              FL  +K  E   NE++ A
Sbjct: 127 NIIFLMDKKEVEIKFNEIRKA 147


>gi|254521461|ref|ZP_05133516.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
 gi|219719052|gb|EED37577.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
          Length = 196

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 20/162 (12%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A DI++++ P +  +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +DVE+ I G+Y LEVSSPG+DRP+     F R  G +    + L   ++++L G+I
Sbjct: 65  VSAQMDVEDPISGNYTLEVSSPGVDRPLFNLEQFGRHLGEMAKVTLKLPQDNRRRLQGRI 124

Query: 136 MGTSETG----FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             T E      F ++K           ++ +S D++  AR++
Sbjct: 125 EATDEAADTITFVVDK----------TEVIVSADNIDKARIM 156


>gi|154506275|ref|ZP_02043013.1| hypothetical protein RUMGNA_03817 [Ruminococcus gnavus ATCC 29149]
 gi|153793414|gb|EDN75834.1| hypothetical protein RUMGNA_03817 [Ruminococcus gnavus ATCC 29149]
          Length = 155

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 2/107 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P++ E  F  V +  ++E  N  L+ ++++  G +T+ DCE +S+  S ILD ++ I
Sbjct: 14  LLEPIVAEQGFELVDVEYVKEAGNWYLRAYIDKP-GGITVDDCEVVSRRFSDILDEKDYI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           E  Y  EVSSPG+ RP+ ++ DF+R  G  V      +   +++ +G
Sbjct: 73  EDSYIFEVSSPGLGRPLKKEKDFIRSVGQEVEIRTYRAINRQKEFVG 119


>gi|237757009|ref|ZP_04585464.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237690827|gb|EEP59980.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 147

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 9/154 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   +  ++ P++EE  F+ V I  +  K  +L+I++   +G  ++ DCE +S+ I  
Sbjct: 1   MKVEEKVKELLLPILEERDFKLVDIEFIPSKRPILRIYIYNPEGT-SIDDCEWVSKRIGA 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE++I+  Y LEVSSPG+DR      ++  + G  V  +      +K+   G ++G 
Sbjct: 60  LLDVEDLIDKAYILEVSSPGLDRKFKNIEEYDIFKGRDVVIKTKEPINEKKVFKGTLLG- 118

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 LE EK   K+ NE  + I  +++   +L
Sbjct: 119 ------LEDEKVKIKE-NEETVEIPLENVSQTKL 145


>gi|320540175|ref|ZP_08039830.1| putative conserved protein [Serratia symbiotica str. Tucson]
 gi|320029841|gb|EFW11865.1| putative conserved protein [Serratia symbiotica str. Tucson]
          Length = 156

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 1/103 (0%)

Query: 33  IEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRL 92
           +E + F  V I  +  +   L+I+++ ++G + + DC ++S  +S +LDVE  I   Y L
Sbjct: 22  VEALGFEFVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQVSAVLDVEEPIAVAYNL 80

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           EVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 81  EVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGII 123


>gi|257452236|ref|ZP_05617535.1| putative cytoplasmic protein [Fusobacterium sp. 3_1_5R]
 gi|317058779|ref|ZP_07923264.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
 gi|313684455|gb|EFS21290.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
          Length = 153

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 9/140 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  ++ P  EE+    V +  +++     ++++VE+ +G++ L DC  LS  I   +D  
Sbjct: 8   IEKIVIPAAEELGLSLVDVEYMQDGGYWYVRVYVEKLEGDVNLEDCASLSGKIEDAVD-- 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +I+  + LEVSSPGI+RP+ ++SDF+R+ G  +   +     +K+ + G +        
Sbjct: 66  QLIDKKFFLEVSSPGIERPLKKESDFIRFTGEKIFVALKHKLNEKRNIEGILRAYENQSL 125

Query: 144 FLEKEKRGEKDMNELQIAIS 163
            L      E D  ELQI  S
Sbjct: 126 LL------EVDGEELQIPFS 139


>gi|153952308|ref|YP_001397397.1| hypothetical protein JJD26997_0151 [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|166979754|sp|A7H1L7|RIMP_CAMJD RecName: Full=Ribosome maturation factor rimP
 gi|152939754|gb|ABS44495.1| protein Tmden_0678 [Campylobacter jejuni subsp. doylei 269.97]
          Length = 140

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 11/120 (9%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K+  KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELVK----ITTNEKEKIEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135


>gi|259586207|sp|A8G905|RIMP_SERP5 RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++ ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEEPITVAYNLEVSSPGLDRPMFTAEHYTRFLGDEVSLVLRMAVQNRRKWQGII 119


>gi|30263820|ref|NP_846197.1| hypothetical protein BA_3954 [Bacillus anthracis str. Ames]
 gi|42782905|ref|NP_980152.1| hypothetical protein BCE_3855 [Bacillus cereus ATCC 10987]
 gi|47529244|ref|YP_020593.1| hypothetical protein GBAA_3954 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47569094|ref|ZP_00239783.1| YlxS-like protein [Bacillus cereus G9241]
 gi|49186667|ref|YP_029919.1| hypothetical protein BAS3668 [Bacillus anthracis str. Sterne]
 gi|49478391|ref|YP_037878.1| hypothetical protein BT9727_3558 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52141671|ref|YP_085158.1| hypothetical protein BCZK3576 [Bacillus cereus E33L]
 gi|165872607|ref|ZP_02217238.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167635806|ref|ZP_02394115.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167639838|ref|ZP_02398107.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170687819|ref|ZP_02879033.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170706785|ref|ZP_02897243.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177652089|ref|ZP_02934635.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190568460|ref|ZP_03021367.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|196036915|ref|ZP_03104299.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196042165|ref|ZP_03109448.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196044678|ref|ZP_03111913.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|206978439|ref|ZP_03239306.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217961237|ref|YP_002339805.1| hypothetical protein BCAH187_A3864 [Bacillus cereus AH187]
 gi|218904945|ref|YP_002452779.1| hypothetical protein BCAH820_3829 [Bacillus cereus AH820]
 gi|222097261|ref|YP_002531318.1| hypothetical protein BCQ_3601 [Bacillus cereus Q1]
 gi|225865796|ref|YP_002751174.1| hypothetical protein BCA_3913 [Bacillus cereus 03BB102]
 gi|227813275|ref|YP_002813284.1| hypothetical protein BAMEG_0677 [Bacillus anthracis str. CDC 684]
 gi|229603147|ref|YP_002868055.1| hypothetical protein BAA_3978 [Bacillus anthracis str. A0248]
 gi|254683476|ref|ZP_05147336.1| hypothetical protein BantC_06445 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254735855|ref|ZP_05193561.1| hypothetical protein BantWNA_11921 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254739619|ref|ZP_05197313.1| hypothetical protein BantKB_01112 [Bacillus anthracis str. Kruger
           B]
 gi|254756008|ref|ZP_05208039.1| hypothetical protein BantV_26379 [Bacillus anthracis str. Vollum]
 gi|254759331|ref|ZP_05211356.1| hypothetical protein BantA9_13571 [Bacillus anthracis str.
           Australia 94]
 gi|301055307|ref|YP_003793518.1| nus operon associated protein [Bacillus anthracis CI]
 gi|34222814|sp|Q81WL9|RIMP_BACAN RecName: Full=Ribosome maturation factor rimP
 gi|51316695|sp|Q732Q5|RIMP_BACC1 RecName: Full=Ribosome maturation factor rimP
 gi|81395111|sp|Q6HEZ8|RIMP_BACHK RecName: Full=Ribosome maturation factor rimP
 gi|81686585|sp|Q636K9|RIMP_BACCZ RecName: Full=Ribosome maturation factor rimP
 gi|226706060|sp|B7JJ95|RIMP_BACC0 RecName: Full=Ribosome maturation factor rimP
 gi|226706064|sp|B7HLF0|RIMP_BACC7 RecName: Full=Ribosome maturation factor rimP
 gi|254765081|sp|B9IVA5|RIMP_BACCQ RecName: Full=Ribosome maturation factor rimP
 gi|254803820|sp|C1EP39|RIMP_BACC3 RecName: Full=Ribosome maturation factor rimP
 gi|254803830|sp|C3P5L9|RIMP_BACAA RecName: Full=Ribosome maturation factor rimP
 gi|254806572|sp|C3L7B0|RIMP_BACAC RecName: Full=Ribosome maturation factor rimP
 gi|259585701|sp|A0RHI8|RIMP_BACAH RecName: Full=Ribosome maturation factor rimP
 gi|30258464|gb|AAP27683.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|42738832|gb|AAS42760.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
 gi|47504392|gb|AAT33068.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47554256|gb|EAL12618.1| YlxS-like protein [Bacillus cereus G9241]
 gi|49180594|gb|AAT55970.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|49329947|gb|AAT60593.1| conserved hypothetical protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51975140|gb|AAU16690.1| conserved hypothetical protein [Bacillus cereus E33L]
 gi|164711639|gb|EDR17185.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167512239|gb|EDR87616.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167528763|gb|EDR91521.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170128203|gb|EDS97072.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170668135|gb|EDT18884.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172082458|gb|EDT67523.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190560464|gb|EDV14442.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|195990470|gb|EDX54454.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196024713|gb|EDX63385.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|196027017|gb|EDX65641.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|206743354|gb|EDZ54794.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217067014|gb|ACJ81264.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|218536944|gb|ACK89342.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|221241319|gb|ACM14029.1| conserved hypothetical protein [Bacillus cereus Q1]
 gi|225790678|gb|ACO30895.1| conserved hypothetical protein [Bacillus cereus 03BB102]
 gi|227005285|gb|ACP15028.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
 gi|229267555|gb|ACQ49192.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
 gi|300377476|gb|ADK06380.1| protein associated with nus operon [Bacillus cereus biovar
           anthracis str. CI]
 gi|324327711|gb|ADY22971.1| ribosome maturation protein RimP [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 156

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 12/155 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +S+ +S  LD E
Sbjct: 9   VEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAVSERLSEALDKE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM---GTSE 140
           + I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++   GT+ 
Sbjct: 68  DPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKMLSYDGTTI 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           T     K ++ E       I I  D + +ARL VT
Sbjct: 128 TLLLTIKTRKKE-------IQIPMDKVANARLAVT 155


>gi|294788743|ref|ZP_06753984.1| 15 kDa protein [Simonsiella muelleri ATCC 29453]
 gi|294483225|gb|EFG30911.1| 15 kDa protein [Simonsiella muelleri ATCC 29453]
          Length = 145

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 65/112 (58%), Gaps = 5/112 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +++   +  + +  V   L  +  L  ++F++ + G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILDTTLPGLGYELVDFELTAQGTL--RVFIDTE-GGITVEDCANVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           N+   +  LE+SSPG+DRP+ + SDF+R++G +V  +  L    ++  IGKI
Sbjct: 59  NV--DYKNLEISSPGLDRPLKKASDFVRFSGSLVKIKTRLPIDGQKNFIGKI 108


>gi|261820126|ref|YP_003258232.1| hypothetical protein Pecwa_0806 [Pectobacterium wasabiae WPP163]
 gi|261604139|gb|ACX86625.1| protein of unknown function DUF150 [Pectobacterium wasabiae WPP163]
          Length = 140

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 1/107 (0%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+ I  
Sbjct: 2   ISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVEDPITV 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            Y LEVSSPG++RP+     +L + G  V   + ++  +++K +G I
Sbjct: 61  AYNLEVSSPGLERPLFTAEHYLHFIGEEVTVVLRMAVQNRRKWLGVI 107


>gi|291536068|emb|CBL09180.1| Uncharacterized protein conserved in bacteria [Roseburia
           intestinalis M50/1]
 gi|291538563|emb|CBL11674.1| Uncharacterized protein conserved in bacteria [Roseburia
           intestinalis XB6B4]
          Length = 155

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 74/136 (54%), Gaps = 2/136 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I P+++ M+F  V +  ++E     L+ +++++ G +T+ DCE +++ ++ ILD E+ +
Sbjct: 14  LITPILDRMNFELVDVEYVKEGGTWYLRAYIDKE-GGITVNDCEAVAREMNEILDREDFV 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           E  Y  EVSSPG+ RP+ ++ D++R  G  V      +   +++  G +    E    ++
Sbjct: 73  EDSYVFEVSSPGLGRPLKKEKDYIRSMGKEVEIRTYRAINREKEFYGILSAYDENTVTIK 132

Query: 147 KEKRGEKDMNELQIAI 162
            E   E    +  IA+
Sbjct: 133 TEDGTEMTFEKSDIAL 148


>gi|283788202|ref|YP_003368067.1| hypothetical protein ROD_46621 [Citrobacter rodentium ICC168]
 gi|282951656|emb|CBG91356.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
          Length = 154

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 12  LTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I
Sbjct: 71  PITVAYNLEVSSPGLDRPLFTAEHYARFLGEEVSLVLRMAVQNRRKWQGVI 121


>gi|170717518|ref|YP_001784610.1| hypothetical protein HSM_1288 [Haemophilus somnus 2336]
 gi|226695902|sp|B0UU11|RIMP_HAES2 RecName: Full=Ribosome maturation factor rimP
 gi|168825647|gb|ACA31018.1| protein of unknown function DUF150 [Haemophilus somnus 2336]
          Length = 153

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 65/116 (56%), Gaps = 1/116 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++QP +E++      I          +++++++ DG +T+ DC ++S+ +S +
Sbjct: 4   LEDKLQELLQPSVEDLGCELWGIECQRSGRFFTVRLYIDKKDGGVTVDDCADVSRQVSAV 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LDVE+ I   Y LEVSSPG++RP+     F  + G  ++  + +   D++K  GK+
Sbjct: 64  LDVEDPIADKYNLEVSSPGLNRPLFTLKQFENYIGQDISVHLRVPMFDRRKWQGKL 119


>gi|260887248|ref|ZP_05898511.1| putative cytoplasmic protein [Selenomonas sputigena ATCC 35185]
 gi|330838994|ref|YP_004413574.1| Ribosome maturation factor rimP [Selenomonas sputigena ATCC 35185]
 gi|260863310|gb|EEX77810.1| putative cytoplasmic protein [Selenomonas sputigena ATCC 35185]
 gi|329746758|gb|AEC00115.1| Ribosome maturation factor rimP [Selenomonas sputigena ATCC 35185]
          Length = 150

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + +++Q ++++ +   V +  ++E++  L+++++++ G + + DC+ +S+ +  ILD ++
Sbjct: 9   VEAIVQEIVQDSNLEVVDVEYVKERDWYLRVYLDKE-GGIEIDDCQRVSETLEQILDEKD 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           ++   Y LEVSSPG+DR + +  DF R  G  V          K+  +G + G
Sbjct: 68  LLTEAYILEVSSPGLDRVLKKARDFEREQGKAVDVTFYAPVDGKKTWVGTLTG 120


>gi|320186659|gb|EFW61383.1| hypothetical protein SGF_01107 [Shigella flexneri CDC 796-83]
 gi|332090719|gb|EGI95813.1| hypothetical protein SB359474_3714 [Shigella boydii 3594-74]
          Length = 140

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 1/107 (0%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           I   +E + F  V I  +      L+I+++ +DG + + DC ++S  +S +LDVE+ I  
Sbjct: 2   ITAPVEALGFELVGIEFIRGHTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPITV 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 61  AYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 107


>gi|293393155|ref|ZP_06637470.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291424301|gb|EFE97515.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 187

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  +S +L
Sbjct: 41  LEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQVSAVL 99

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           DVE+ +   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 100 DVEDPVTVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGII 154


>gi|84778873|dbj|BAE73650.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 140

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 1/103 (0%)

Query: 33  IEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRL 92
           +E + F  V I  +  +   L+I++  D+G +T+ DC ++S  +S +LDVE+ I   Y L
Sbjct: 6   VEALGFELVGIEFIRGRQSTLRIYINSDEG-ITVDDCADVSHQVSAVLDVEDPISVAYSL 64

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           EVSSPG+DRP+   + + ++ G  V+  + ++  +++K  G I
Sbjct: 65  EVSSPGLDRPLFTAAHYRQFIGSDVSVVLRIAVQNRRKWQGII 107


>gi|325267088|ref|ZP_08133757.1| protein of hypothetical function DUF150 [Kingella denitrificans
           ATCC 33394]
 gi|324981441|gb|EGC17084.1| protein of hypothetical function DUF150 [Kingella denitrificans
           ATCC 33394]
          Length = 145

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 67/112 (59%), Gaps = 5/112 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +  M +  V + L  +   +L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DLQQILETTLPGMGYELVDVELTAQG--ILRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           ++   H  LE+SSPG+DRP+ + +DF+R+ G +V  +  L    ++  IG+I
Sbjct: 59  DVDYKH--LEISSPGLDRPLKKAADFVRFTGSMVKLKTRLPVDGQKNFIGRI 108


>gi|261867878|ref|YP_003255800.1| hypothetical protein D11S_1199 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413210|gb|ACX82581.1| protein YhbC [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 151

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 57/87 (65%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           + L +++F++++ G +T+ DC ++S+ +S +LDVE+ I   Y LEVSSPG+DRP+   + 
Sbjct: 33  RYLTVRLFIDKE-GGVTVEDCADVSRQVSAVLDVEDPIADKYNLEVSSPGLDRPLFTLAQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + R+ G  +   + +   D++K  G++
Sbjct: 92  YARYVGQEILVHLRIPVADRRKWQGEL 118


>gi|145298042|ref|YP_001140883.1| hypothetical protein ASA_1008 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166919114|sp|A4SJR3|RIMP_AERS4 RecName: Full=Ribosome maturation factor rimP
 gi|142850814|gb|ABO89135.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 152

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L++F++ ++G +T+ +C E+S  +  I+DVE+ I   Y LEVSSPG+DRP+ + + F ++
Sbjct: 37  LRVFIDGENG-VTVENCAEVSHQVGAIMDVEDPITEEYFLEVSSPGLDRPLFKVAQFEKY 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            G   A ++ +++ +++K  G I
Sbjct: 96  VGQEAAVQLRMATNNRRKFKGVI 118


>gi|291327116|ref|ZP_06127048.2| hypothetical protein PROVRETT_09231 [Providencia rettgeri DSM 1131]
 gi|291311612|gb|EFE52065.1| hypothetical protein PROVRETT_09231 [Providencia rettgeri DSM 1131]
          Length = 171

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 67/111 (60%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V +  +  +   L++F++ ++G +T+ DC ++S  +S +LDVE+
Sbjct: 29  LTEMISAPVEALGFEFVGLEFVRGRTSTLRVFIDSEEG-ITVDDCADVSHQVSAVLDVED 87

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LE+SSPG++RP+   + + R+ G  VA  + ++  +++K  G I
Sbjct: 88  PISVIYNLEISSPGLERPLFTIAHYERFMGEEVALTLRIAMQNRRKWQGII 138


>gi|315634095|ref|ZP_07889384.1| YhbC family protein [Aggregatibacter segnis ATCC 33393]
 gi|315477345|gb|EFU68088.1| YhbC family protein [Aggregatibacter segnis ATCC 33393]
          Length = 151

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 57/87 (65%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           + L +++F++++ G +T+ DC ++S+ +S +LDVE+ I   Y LEVSSPG+DRP+   + 
Sbjct: 33  RYLTVRLFIDKE-GGVTVDDCADVSRQVSAVLDVEDPIADKYNLEVSSPGLDRPLFTLAQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + R+ G  +   + +   D++K  G++
Sbjct: 92  YTRYVGQEIVVHLRIPVADRRKWQGEL 118


>gi|163752375|ref|ZP_02159570.1| hypothetical protein KT99_00518 [Shewanella benthica KT99]
 gi|161327747|gb|EDP98934.1| hypothetical protein KT99_00518 [Shewanella benthica KT99]
          Length = 151

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 7/114 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L+++++ D+G + + DC E S+ IS +LDVE+ I   + LEVSSPG+DRP+     
Sbjct: 33  KHSILRVYIDNDNG-IFIEDCAETSRQISAVLDVEDPISTEFTLEVSSPGVDRPLFSAEQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
           +  +    V  ++ +  G  + L G ++G       L        D NEL IA+
Sbjct: 92  YGSYIDETVKIQLTMPVGGSRNLKGTVIGVEGQTLTL------SVDGNELIIAL 139


>gi|237742965|ref|ZP_04573446.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
 gi|229430613|gb|EEO40825.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
          Length = 156

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 4/139 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I     VE
Sbjct: 11  ITKIVNPFIEEMNLSLVDVEYVQDGGYWYIRIFIENLNGDLNIEDCSKLSSKIED--KVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS-ETG 142
            +IE  + LEVSSPG++RP+ +  D++R+ G  +   +      K++    I   + +  
Sbjct: 69  GLIEHKFFLEVSSPGLERPLKKIEDYVRFKGEKITLHLKHKLNYKKQFKAVIKEVNGDNI 128

Query: 143 FFLEKEKRGEKDMNELQIA 161
            FL  +K  E   NE++ A
Sbjct: 129 IFLIDKKEIEIKFNEIRKA 147


>gi|238924308|ref|YP_002937824.1| hypothetical protein EUBREC_1947 [Eubacterium rectale ATCC 33656]
 gi|259585772|sp|C4ZBF8|RIMP_EUBR3 RecName: Full=Ribosome maturation factor rimP
 gi|238875983|gb|ACR75690.1| protein of unknown function DUF150 [Eubacterium rectale ATCC 33656]
 gi|291525078|emb|CBK90665.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
           DSM 17629]
 gi|291529173|emb|CBK94759.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
           M104/1]
          Length = 155

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 73/137 (53%), Gaps = 2/137 (1%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           S IQP+++ M+F  V +  ++E  +  L+ +++++ G +T+ DCE +++ ++ ILD E+ 
Sbjct: 13  SFIQPILDSMNFELVDVEYVKEGGMNYLRAYIDKE-GGITVDDCEVVARQMNEILDREDY 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I   Y  EVSSPG+ RP+ ++ D++R     +      +    ++  G +    +    +
Sbjct: 72  IPDSYTFEVSSPGLGRPLKKEKDYVRNMNKEIEIRTYRAINKSKEFYGLLKAYDKDTVTI 131

Query: 146 EKEKRGEKDMNELQIAI 162
             E   E   N+  IA+
Sbjct: 132 TDEDGNETTFNKSDIAL 148


>gi|229593539|ref|YP_001476723.2| hypothetical protein Spro_0487 [Serratia proteamaculans 568]
          Length = 150

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           DVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 63  DVEEPITVAYNLEVSSPGLDRPMFTAEHYTRFLGDEVSLVLRMAVQNRRKWQGII 117


>gi|28899232|ref|NP_798837.1| hypothetical protein VP2458 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838301|ref|ZP_01990968.1| protein YhbC [Vibrio parahaemolyticus AQ3810]
 gi|260362205|ref|ZP_05775189.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|260879073|ref|ZP_05891428.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|260897744|ref|ZP_05906240.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|260900800|ref|ZP_05909195.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|34223108|sp|Q87M00|RIMP_VIBPA RecName: Full=Ribosome maturation factor rimP
 gi|28807456|dbj|BAC60721.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748290|gb|EDM59149.1| protein YhbC [Vibrio parahaemolyticus AQ3810]
 gi|308088965|gb|EFO38660.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|308089555|gb|EFO39250.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|308108208|gb|EFO45748.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|308111471|gb|EFO49011.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|328474232|gb|EGF45037.1| ribosome maturation protein RimP [Vibrio parahaemolyticus 10329]
          Length = 151

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   ++ +++  +E   +  V +  +    +  L+I+++ ++G + + DC E+S  +S 
Sbjct: 3   GLERQLTEMLEAPVEASGYELVGLEFIRAGAHSTLRIYIDHENG-INVDDCAEVSHQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G 
Sbjct: 62  VLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHGV 121


>gi|86149726|ref|ZP_01067956.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|205356511|ref|ZP_03223275.1| hypothetical protein Cj8421_0138 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|85839994|gb|EAQ57253.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|205345698|gb|EDZ32337.1| hypothetical protein Cj8421_0138 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 140

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC +LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCAKLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +      +++ +K+K+  KI+   +    LE  +  EK        I+F+ +  AR
Sbjct: 86  SIGELAK----ITTNEKEKIEAKIIAVDDENITLENLENKEK------TTINFNDIKKAR 135

Query: 172 LIV 174
             +
Sbjct: 136 TFI 138


>gi|262393380|ref|YP_003285234.1| hypothetical protein VEA_002607 [Vibrio sp. Ex25]
 gi|262336974|gb|ACY50769.1| UPF0090 domain-containing protein [Vibrio sp. Ex25]
          Length = 151

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   ++ +++  +E   +  V +  +    +  L+I+++ ++G + + DC E+S  +S 
Sbjct: 3   GLERQLTEMLEAPVEASGYELVGLEFIRAGAHSTLRIYIDHENG-INVDDCAEVSHQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G 
Sbjct: 62  VLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHGV 121


>gi|197287228|ref|YP_002153100.1| hypothetical protein PMI3416 [Proteus mirabilis HI4320]
 gi|226703818|sp|B4F2B7|RIMP_PROMH RecName: Full=Ribosome maturation factor rimP
 gi|194684715|emb|CAR46695.1| conserved hypothetical protein [Proteus mirabilis HI4320]
          Length = 152

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 73/120 (60%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     +++++   +E + F  V +  +  +   L+I+++ ++G +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMVSAPVEALGFEFVGLEFIRGRVSTLRIYIDSEEG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I+  Y LE+SSPG++RP+   + + ++ G  VA  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPIQTFYNLEISSPGLERPLFTTTHYEQFIGEEVAVVLRIAMQNRRKWQGII 119


>gi|86151421|ref|ZP_01069636.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85841768|gb|EAQ59015.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 140

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K   KI+   +    LE  +  EK        I+F+ +  A+
Sbjct: 86  SIGELVK----ITTNEKEKFEAKIIAVDDENITLENLENKEK------TTINFNDIKKAK 135

Query: 172 LIV 174
             V
Sbjct: 136 TFV 138


>gi|54307813|ref|YP_128833.1| hypothetical protein PBPRA0610 [Photobacterium profundum SS9]
 gi|90412483|ref|ZP_01220486.1| hypothetical protein P3TCK_13963 [Photobacterium profundum 3TCK]
 gi|51316622|sp|Q6LUJ4|RIMP_PHOPR RecName: Full=Ribosome maturation factor rimP
 gi|46912236|emb|CAG19031.1| conserved hypothetical protein [Photobacterium profundum SS9]
 gi|90326520|gb|EAS42926.1| hypothetical protein P3TCK_13963 [Photobacterium profundum 3TCK]
          Length = 151

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 56/86 (65%), Gaps = 1/86 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L++FV+ ++G + + DC E S+ IS ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRVFVDHENG-INVEDCAEASRQISAVMDVEDPITVAYHLEVSSPGLERPLFKAAHYQQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGT 138
            GH V   + ++  +++K  G I+  
Sbjct: 96  VGHEVNLVLKMAMNNRRKWKGDIVAV 121


>gi|238916822|ref|YP_002930339.1| hypothetical protein EUBELI_00890 [Eubacterium eligens ATCC 27750]
 gi|259585771|sp|C4Z5N3|RIMP_EUBE2 RecName: Full=Ribosome maturation factor rimP
 gi|238872182|gb|ACR71892.1| hypothetical protein EUBELI_00890 [Eubacterium eligens ATCC 27750]
          Length = 156

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 65/106 (61%), Gaps = 3/106 (2%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + +IQPV+E        +  ++E  +  L+++++++ G +T+ DC+ +S+A + ILD EN
Sbjct: 12  TELIQPVVEANGVELFDVDYVKEGSDWYLRVYIDKE-GGVTIDDCQNVSRAFNEILDREN 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            I+  Y  EVSSPG+ RP+ ++ D+ +  G ++  ++  S  DK K
Sbjct: 71  YIDDQYIFEVSSPGLTRPLKKEKDYEKSIGRMIEIKL-FSPVDKSK 115


>gi|296328567|ref|ZP_06871086.1| probable cytoplasmic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154376|gb|EFG95175.1| probable cytoplasmic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 156

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 78/141 (55%), Gaps = 8/141 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I     +E
Sbjct: 11  ITRIVNPFIEEMNLSLVDVEYVQDGGYWYVRIFIENLNGDLNIEDCSKLSSKIED--KIE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK---LIGKIMGTSE 140
            +IE  + LEVSSPG++RP+ +  D+ R+ G  +   +     DK++   +I ++ G  +
Sbjct: 69  ELIEHKFFLEVSSPGLERPLKKLEDYTRFIGEKITLHLKHKLDDKKQFKTIIKEVNG--D 126

Query: 141 TGFFLEKEKRGEKDMNELQIA 161
              FL  +K  E   NE++ A
Sbjct: 127 NIIFLMDKKEVEIKFNEIRKA 147


>gi|238896677|ref|YP_002921422.1| hypothetical protein KP1_4889 [Klebsiella pneumoniae NTUH-K2044]
 gi|238549004|dbj|BAH65355.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 154

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 12  LTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVED 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSS G+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 71  PITVAYNLEVSSLGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGII 121


>gi|226329685|ref|ZP_03805203.1| hypothetical protein PROPEN_03595 [Proteus penneri ATCC 35198]
 gi|225202871|gb|EEG85225.1| hypothetical protein PROPEN_03595 [Proteus penneri ATCC 35198]
          Length = 152

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 72/120 (60%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     +++++   +E + F  V +  +  +   L+I+++ +DG +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMVSAPVEALGFEFVGLEFIRGRESTLRIYIDSEDG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I+  Y LE+SSPG++RP+   + + ++ G   A  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPIQTVYNLEISSPGLERPLFTATHYEQFIGEEAAIVLRIAMQNRRKWQGII 119


>gi|51316751|sp|Q7MYY5|RIMP_PHOLL RecName: Full=Ribosome maturation factor rimP
 gi|36787788|emb|CAE16903.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 152

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 72/120 (60%), Gaps = 4/120 (3%)

Query: 19  MGLAG---DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           MGL+     ++++I   +E + F  V +  +  +   L+I+++ ++G +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDSENG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LE+SSPG++RP+     + R+ G  V+  + ++  +++K +G I
Sbjct: 60  VSAVLDVEDPISVLYNLEISSPGLERPLFTTEHYQRFIGEEVSLVLRIAMQNRRKWLGII 119


>gi|160892798|ref|ZP_02073588.1| hypothetical protein CLOL250_00329 [Clostridium sp. L2-50]
 gi|156865839|gb|EDO59270.1| hypothetical protein CLOL250_00329 [Clostridium sp. L2-50]
          Length = 142

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 82/143 (57%), Gaps = 7/143 (4%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P+IE  +   V +  ++E  +  L+I+ +++ G +T+ DCE +++A+S +LD ++ I
Sbjct: 1   MVLPIIEANNLELVDVEYVKEGSDYYLRIYADKE-GGITIGDCEIVNRAMSDLLDADDFI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL- 145
           +  Y LEVSSPG+ RP+ +++DF R  G +V  +      + +   G++    E    + 
Sbjct: 60  KDAYILEVSSPGLTRPLKKENDFKRSIGKIVEIKTYTKIDNCKDFEGELTAYDEETVTIL 119

Query: 146 ---EKE-KRGEKDMNELQIAISF 164
              EKE K   KD++ +++A  +
Sbjct: 120 TEDEKELKIARKDISMIRLAFVY 142


>gi|257465969|ref|ZP_05630280.1| putative cytoplasmic protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917125|ref|ZP_07913365.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691000|gb|EFS27835.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 153

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 9/140 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  ++ P  EE+    V +  +++     ++++VE+ +G++ L DC  LS  I   +D  
Sbjct: 8   IEKIVIPAAEELGLSLVDVEYMQDGGYWYVRVYVEKLEGDVNLEDCASLSGKIEDAVD-- 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +I+  + LEVSSPGI+RP+ ++SDF+R+ G  +   +     +K+ + G +        
Sbjct: 66  QLIDKKFFLEVSSPGIERPLKKESDFIRFTGEKIFVALKHKLNEKRNIEGILRAYENQTL 125

Query: 144 FLEKEKRGEKDMNELQIAIS 163
            L      E D  ELQI  S
Sbjct: 126 LL------EVDGEELQIPFS 139


>gi|223042073|ref|ZP_03612249.1| hypothetical protein AM202_0665 [Actinobacillus minor 202]
 gi|240949225|ref|ZP_04753569.1| hypothetical protein AM305_09786 [Actinobacillus minor NM305]
 gi|223017148|gb|EEF15584.1| hypothetical protein AM202_0665 [Actinobacillus minor 202]
 gi|240296341|gb|EER46985.1| hypothetical protein AM305_09786 [Actinobacillus minor NM305]
          Length = 153

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 2/112 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ + Q  IE M    V I        L ++++++++ G +T+ DC ++S+ +S ILDVE
Sbjct: 8   LTELTQDTIEAMGCELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+
Sbjct: 67  DPIADKYNLEVSSPGLDRPLFTLAHYERFVGREITIHLRIPMFDRRKWQGKL 118


>gi|188026374|ref|ZP_02961857.2| hypothetical protein PROSTU_03929 [Providencia stuartii ATCC 25827]
 gi|188020155|gb|EDU58195.1| hypothetical protein PROSTU_03929 [Providencia stuartii ATCC 25827]
          Length = 171

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 67/111 (60%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + F  V +  +  +   L++F++ ++G +T+ DC ++S  +S +LDVE+
Sbjct: 29  LTEMISAPVEALGFEFVGLEFVRARTSTLRVFIDSEEG-ITVDDCADVSHQVSAVLDVED 87

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LE+SSPG++RP+   + + R+ G  VA  + ++  ++++  G I
Sbjct: 88  PISVVYNLEISSPGLERPLFTVAHYERFVGEEVALTLRIAMQNRRRWQGII 138


>gi|113460962|ref|YP_719029.1| hypothetical protein HS_0819 [Haemophilus somnus 129PT]
 gi|122945308|sp|Q0I3P7|RIMP_HAES1 RecName: Full=Ribosome maturation factor rimP
 gi|112823005|gb|ABI25094.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 153

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 65/116 (56%), Gaps = 1/116 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++QP +E++      I          +++++++ DG +T+ DC ++S+ +S +
Sbjct: 4   LEDKLQELLQPSVEDLGCELWGIECQRSGRFFTVRLYIDKKDGGVTVDDCADVSRQVSAV 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LDVE+ I   Y LEVSSPG++RP+     F  + G  ++  + +   D++K  GK+
Sbjct: 64  LDVEDPIADKYNLEVSSPGLNRPLFTLKQFENYIGQDISVHLRVPMLDRRKWQGKL 119


>gi|308272454|emb|CBX29058.1| Ribosome maturation factor rimP [uncultured Desulfobacterium sp.]
          Length = 194

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +++++V++  G +TL+DC  +S  +S ILD+    +  Y LEVSSPG +RP+ +  DF R
Sbjct: 74  VIRLYVDKQ-GGVTLKDCAWVSHQLSDILDINLDTDWPYSLEVSSPGANRPLGKPEDFKR 132

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           + G+      ++    ++   G ++G ++ GF   K       +N+  +AIS+  +  AR
Sbjct: 133 FKGNTATVRTIVPVEGQKNFKGVLLGFND-GFVKLK-------INDKMVAISYKEIAKAR 184

Query: 172 LI 173
           L 
Sbjct: 185 LF 186


>gi|157320498|gb|ABV39595.1| protein of unknown function DUF150 [Serratia proteamaculans 568]
          Length = 140

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 1/103 (0%)

Query: 33  IEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRL 92
           +E + F  V I  +  +   L+I+++ ++G + + DC ++S  +S +LDVE  I   Y L
Sbjct: 6   VEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQVSAVLDVEEPITVAYNL 64

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           EVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 65  EVSSPGLDRPMFTAEHYTRFLGDEVSLVLRMAVQNRRKWQGII 107


>gi|283836284|ref|ZP_06356025.1| hypothetical protein CIT292_10732 [Citrobacter youngae ATCC 29220]
 gi|291067647|gb|EFE05756.1| hypothetical protein CIT292_10732 [Citrobacter youngae ATCC 29220]
          Length = 140

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 1/107 (0%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+ I  
Sbjct: 2   ITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVEDPITV 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            Y LEVSSPG+DRP+     ++R+ G  V   + ++  +++K  G I
Sbjct: 61  AYNLEVSSPGLDRPLFTAEHYVRFLGEEVTLVLRMAVQNRRKWQGVI 107


>gi|226313024|ref|YP_002772918.1| hypothetical protein BBR47_34370 [Brevibacillus brevis NBRC 100599]
 gi|254801675|sp|C0ZF55|RIMP_BREBN RecName: Full=Ribosome maturation factor rimP
 gi|226095972|dbj|BAH44414.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 152

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           + G ++ +I P++EE+    V I   +E  N  L++F++ + GN+ + DC  +S+ +S  
Sbjct: 4   VTGIVTELITPIVEEVGLELVDIEYKKEGSNWFLRVFIDNETGNIDIDDCRLVSEKLSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           LD  + I   Y LEVSSPG +RP+ +  DF +  G  V
Sbjct: 64  LDEVDPIPTAYFLEVSSPGAERPLRKDKDFTKAVGRNV 101


>gi|157692342|ref|YP_001486804.1| hypothetical protein BPUM_1562 [Bacillus pumilus SAFR-032]
 gi|194014514|ref|ZP_03053131.1| protein YlxS (P15A) [Bacillus pumilus ATCC 7061]
 gi|166979791|sp|A8FDC7|RIMP_BACP2 RecName: Full=Ribosome maturation factor rimP
 gi|157681100|gb|ABV62244.1| hypothetical protein BPUM_1562 [Bacillus pumilus SAFR-032]
 gi|194013540|gb|EDW23105.1| protein YlxS (P15A) [Bacillus pumilus ATCC 7061]
          Length = 157

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 85/153 (55%), Gaps = 8/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S ++QP+++ +    V +  ++E +N  L++F++ D G + + +C ++S+A+S  LD  
Sbjct: 9   VSEMVQPILDGLQLELVDVEFVKEGQNWFLRVFIDSDKG-VDIEECAKVSEALSEKLDEA 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETG 142
           + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +       ++   G++     E  
Sbjct: 68  DPISQNYFLEVSSPGAERPLKKKADFEKALGKNVFMKTYEPIDGEKAFEGELTSFDGEIA 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               K K  +K++N     I ++ + +ARL V+
Sbjct: 128 TVTVKIKTRKKEIN-----IPYEKIANARLAVS 155


>gi|282600045|ref|ZP_05972807.2| hypothetical protein PROVRUST_06459 [Providencia rustigianii DSM
           4541]
 gi|282566854|gb|EFB72389.1| hypothetical protein PROVRUST_06459 [Providencia rustigianii DSM
           4541]
          Length = 185

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 67/111 (60%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + F  V +  +  +   L+IF++ ++G +T+ DC ++S  +S +LDVE+
Sbjct: 43  LTEMVSAPVEALGFEFVGLEFVRGRTSTLRIFIDSEEG-ITVDDCADVSHQVSAVLDVED 101

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++RP+   + + R+ G  VA  + ++  ++++  G I
Sbjct: 102 PISVIYNLEVSSPGMERPLFTIAHYERFMGEEVALTLRIAMQNRRRWQGII 152


>gi|119774096|ref|YP_926836.1| hypothetical protein Sama_0959 [Shewanella amazonensis SB2B]
 gi|166919003|sp|A1S460|RIMP_SHEAM RecName: Full=Ribosome maturation factor rimP
 gi|119766596|gb|ABL99166.1| protein of unknown function DUF150 [Shewanella amazonensis SB2B]
          Length = 151

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 65/112 (58%), Gaps = 2/112 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ P +E   +    I  ++  K+ +L+++++ + G +++ DC + S+ IS ILDVE
Sbjct: 8   LAEMLTPAVEAAGYVVWGIEYVQAGKHSILRVYIDSEQG-ISVDDCADASRQISAILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + I   Y LEVSSPG+DRP+   + + R+ G  V  ++ +     + L G I
Sbjct: 67  DPISNEYTLEVSSPGLDRPLFNAAQYARYVGEDVKVQLTMPVEGSRNLKGVI 118


>gi|237739229|ref|ZP_04569710.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|229422837|gb|EEO37884.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
          Length = 156

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ ++ P +EEM+   V +  L++     +++F+E  +G++++ DC +LS  I     VE
Sbjct: 11  ITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRVFIENLNGDLSIEDCSKLSSKIED--KVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            +IE  + LEVSSPG++R + +  D++R+ G  +   +     DK++ 
Sbjct: 69  ELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKLNDKKQF 116


>gi|160940463|ref|ZP_02087808.1| hypothetical protein CLOBOL_05353 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437043|gb|EDP14810.1| hypothetical protein CLOBOL_05353 [Clostridium bolteae ATCC
           BAA-613]
          Length = 155

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 2/133 (1%)

Query: 31  PVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P++EE  F  V +  ++E     L+ +++++ G + + DCE +S+A+S  LD E+ I+  
Sbjct: 17  PLMEEHGFELVDVEYVKEAGTWYLRAYIDKE-GGIAVDDCEVISRALSDWLDKEDFIDDS 75

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G +    E    L  E 
Sbjct: 76  YILEVSSPGLGRPLKKERDFVRSMGKDVDVRLYRQLNKQKEFTGALSAYDENTVTLTMED 135

Query: 150 RGEKDMNELQIAI 162
             +    +  IA+
Sbjct: 136 GSQMVFEKADIAL 148


>gi|117927004|ref|YP_867621.1| hypothetical protein Mmc1_3730 [Magnetococcus sp. MC-1]
 gi|189040289|sp|A0LE22|RIMP_MAGSM RecName: Full=Ribosome maturation factor rimP
 gi|117610760|gb|ABK46215.1| protein of unknown function DUF150 [Magnetococcus sp. MC-1]
          Length = 185

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 8/110 (7%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           +++L +C  +S+ IS +LDV ++I   Y LEVSSPGI+RP+++  DF R+ G +V     
Sbjct: 76  HISLDECGSISRQISSLLDVHDVIPNAYHLEVSSPGIERPLIKDGDFTRFAGKLVEIRTY 135

Query: 123 ----LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIA---ISFD 165
                 SG ++K  G ++G  E    +  E  GE  +   Q+A   ++FD
Sbjct: 136 QPMDTESGPRKKFRGTLLGLQE-AMVVVAEANGEVRIPWEQVAKAHLTFD 184


>gi|254361244|ref|ZP_04977387.1| hypothetical protein MHA_0829 [Mannheimia haemolytica PHL213]
 gi|153092740|gb|EDN73783.1| hypothetical protein MHA_0829 [Mannheimia haemolytica PHL213]
          Length = 153

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 2/104 (1%)

Query: 33  IEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           IE + F  V I        L ++++++++ G +T+ DC ++S+ +S I DVE+ I   Y 
Sbjct: 16  IEALGFELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAIFDVEDPIADKYN 74

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LEVSSPG+DRP+   + + R+ G  V   + +   D++K  GKI
Sbjct: 75  LEVSSPGLDRPLFTVAHYERFIGQDVVIHLRIPMFDRRKWQGKI 118


>gi|332976857|gb|EGK13682.1| protein of hypothetical function DUF150 [Desmospora sp. 8437]
          Length = 170

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 9/151 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++QP++ E           +E KN +L+++++R DG + L DC  +S+ +  +LD E
Sbjct: 26  VEEMVQPILAEEGLELYDTEYTKEGKNWILRVYIDRPDGKVDLDDCGRVSERLGEVLDRE 85

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + + G Y LEVSSPG +RP+ + + F    G  +          ++K  G +   S    
Sbjct: 86  DPLTGQYFLEVSSPGAERPLKKPAHFEAAVGKRIFLNTFEPVDGRKKFEGVLTRYSPESL 145

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E         +E  + I  + +  ARL++
Sbjct: 146 TVE--------TDEGAVEIPTEKVAKARLVL 168


>gi|269966858|ref|ZP_06180931.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269828525|gb|EEZ82786.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 151

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 57/86 (66%), Gaps = 1/86 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+I+++ ++G + + DC E+S  +S +LDVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIYIDHENG-INVDDCAEVSHQVSAVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGT 138
            GH V+  + ++  +++K  G I G 
Sbjct: 96  IGHEVSIVLKMAVANRRKWKGIIHGV 121


>gi|27365055|ref|NP_760583.1| ribosome maturation protein RimP [Vibrio vulnificus CMCP6]
 gi|37680894|ref|NP_935503.1| hypothetical protein VV2710 [Vibrio vulnificus YJ016]
 gi|320155439|ref|YP_004187818.1| clustered with transcription termination protein NusA [Vibrio
           vulnificus MO6-24/O]
 gi|34223112|sp|Q8DBW2|RIMP_VIBVU RecName: Full=Ribosome maturation factor rimP
 gi|51316954|sp|Q7MI07|RIMP_VIBVY RecName: Full=Ribosome maturation factor rimP
 gi|27361201|gb|AAO10110.1| clustered with transcription termination protein NusA [Vibrio
           vulnificus CMCP6]
 gi|37199643|dbj|BAC95474.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
 gi|319930751|gb|ADV85615.1| clustered with transcription termination protein NusA [Vibrio
           vulnificus MO6-24/O]
          Length = 151

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+I+++ ++G +T+ DC E+S  +S +LDVE+ I   Y LEVSSPG+DRP+ + + + ++
Sbjct: 37  LRIYIDHENG-ITVEDCAEVSHQVSAVLDVEDPISVAYSLEVSSPGLDRPLFKPAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            G  V   + ++  +++K  G+I
Sbjct: 96  IGQEVNVVLKMAVANRRKWKGEI 118


>gi|91228265|ref|ZP_01262201.1| hypothetical protein V12G01_21798 [Vibrio alginolyticus 12G01]
 gi|91188142|gb|EAS74444.1| hypothetical protein V12G01_21798 [Vibrio alginolyticus 12G01]
          Length = 141

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 57/86 (66%), Gaps = 1/86 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+I+++ ++G + + DC E+S  +S +LDVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 27  LRIYIDHENG-INVDDCAEVSHQVSAVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQF 85

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGT 138
            GH V+  + ++  +++K  G I G 
Sbjct: 86  IGHEVSIVLKMAVANRRKWKGIIHGV 111


>gi|225023297|ref|ZP_03712489.1| hypothetical protein EIKCOROL_00150 [Eikenella corrodens ATCC
           23834]
 gi|224943942|gb|EEG25151.1| hypothetical protein EIKCOROL_00150 [Eikenella corrodens ATCC
           23834]
          Length = 141

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 68/112 (60%), Gaps = 5/112 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +V++  +  + +  V   L  + +L  ++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQAVLEKTLPGLGYELVDFELTAQGDL--RVFIDKPEG-ITVEDCATVSNHLSRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           ++   + RLE+SSPG+DRP+ + +DF+R++G +V  +  L    ++  IG I
Sbjct: 59  DV--DYKRLEISSPGLDRPLKKAADFIRFSGSLVKLKTRLPVEGQKNFIGHI 108


>gi|294783787|ref|ZP_06749111.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480665|gb|EFG28442.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
          Length = 156

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 3/108 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ ++ P +EEM+   V +  L++     ++IF+E  +G +++ DC +LS  I     VE
Sbjct: 11  ITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRIFIENLNGELSIEDCSKLSSKIED--KVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            +IE  + LEVSSPG++R + +  D++R+ G  +   +     DK++ 
Sbjct: 69  ELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKLNDKKQF 116


>gi|161579560|ref|NP_931695.2| hypothetical protein plu4531 [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 150

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++++I   +E + F  V +  +  +   L+I+++ ++G +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDSENG-ITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           DVE+ I   Y LE+SSPG++RP+     + R+ G  V+  + ++  +++K +G I
Sbjct: 63  DVEDPISVLYNLEISSPGLERPLFTTEHYQRFIGEEVSLVLRIAMQNRRKWLGII 117


>gi|163941554|ref|YP_001646438.1| hypothetical protein BcerKBAB4_3639 [Bacillus weihenstephanensis
           KBAB4]
 gi|226705817|sp|A9VT54|RIMP_BACWK RecName: Full=Ribosome maturation factor rimP
 gi|163863751|gb|ABY44810.1| protein of unknown function DUF150 [Bacillus weihenstephanensis
           KBAB4]
          Length = 156

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 12/155 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +S+ +S  LD E
Sbjct: 9   VEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VEIEECGAVSERLSEALDKE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM---GTSE 140
           + I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++   G + 
Sbjct: 68  DPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMFEGKLLSYDGNTI 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           T     K ++ E       I I  D + +ARL VT
Sbjct: 128 TLLLTIKTRKKE-------IQIPMDKVANARLAVT 155


>gi|261492532|ref|ZP_05989085.1| hypothetical protein COK_0954 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261496807|ref|ZP_05993181.1| hypothetical protein COI_2524 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261307554|gb|EEY08883.1| hypothetical protein COI_2524 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311691|gb|EEY12841.1| hypothetical protein COK_0954 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 153

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 2/104 (1%)

Query: 33  IEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           IE + F  V I        L ++++++++ G +T+ DC ++S+ +S I DVE+ I   Y 
Sbjct: 16  IEALGFELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAIFDVEDPIADKYN 74

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LEVSSPG+DRP+   + + R+ G  V   + +   D++K  GKI
Sbjct: 75  LEVSSPGLDRPLFTVAHYERFIGQDVVIHLRIPMFDRRKWQGKI 118


>gi|332981611|ref|YP_004463052.1| hypothetical protein Mahau_1032 [Mahella australiensis 50-1 BON]
 gi|332699289|gb|AEE96230.1| protein of unknown function DUF150 [Mahella australiensis 50-1 BON]
          Length = 154

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 2/118 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +  ++ P++E+  F  V I   +E     L+IF+++ DG +T+ DCE +S+ +S  
Sbjct: 6   VADTVRQLVMPILEDNGFELVDIEFKKEGAEQYLRIFIDKPDG-ITIDDCELVSRHLSDK 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD  + I   Y LEVSSPGIDRP+  + DF R  G  V  ++   S   +   G ++G
Sbjct: 65  LDEIDPIPQAYILEVSSPGIDRPLKTQRDFERSMGKQVEIKLYKQSMGHKTYKGTLVG 122


>gi|210612464|ref|ZP_03289322.1| hypothetical protein CLONEX_01523 [Clostridium nexile DSM 1787]
 gi|210151572|gb|EEA82579.1| hypothetical protein CLONEX_01523 [Clostridium nexile DSM 1787]
          Length = 169

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%)

Query: 31  PVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P++E   F  V +  ++E  N  L+ ++++  G +++ DCE +S+A S ILD ++ IE  
Sbjct: 31  PIVESNGFELVDVEYVKEGGNWYLRAYIDKP-GGISVDDCEVVSRAFSDILDEKDYIEDT 89

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++ IG +    +    +E E 
Sbjct: 90  YIFEVSSPGLGRPLKKEKDFARSIGEEVEIRTYRAIDRQKEFIGILKEYDQDTVTIEYED 149

Query: 150 RGEKDMNELQIAI 162
              K     +IA+
Sbjct: 150 ETTKTFERSEIAL 162


>gi|325981568|ref|YP_004293970.1| hypothetical protein NAL212_0881 [Nitrosomonas sp. AL212]
 gi|325531087|gb|ADZ25808.1| protein of unknown function DUF150 [Nitrosomonas sp. AL212]
          Length = 155

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 56/84 (66%), Gaps = 3/84 (3%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           N LL+IFV++ +G + + DC  +S  +S +L VENI  G  RLEVSSPG+DRP+ R++DF
Sbjct: 40  NKLLRIFVDKAEG-ICIDDCVTISNHLSRLLAVENIDYG--RLEVSSPGLDRPLRREADF 96

Query: 110 LRWNGHVVACEIVLSSGDKQKLIG 133
           +R+ G  +  ++ +    ++  +G
Sbjct: 97  IRFRGETIKLKLRIPLEGQKNFVG 120


>gi|119470820|ref|ZP_01613431.1| hypothetical protein ATW7_05756 [Alteromonadales bacterium TW-7]
 gi|119446047|gb|EAW27326.1| hypothetical protein ATW7_05756 [Alteromonadales bacterium TW-7]
          Length = 151

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+ +++ P +E + F    +  ++  ++  L++++  +DG +++ +C + S+ IS I
Sbjct: 4   LEQDLVTMLTPAVEMLGFELHGLEFVQAGRHSTLRVYIAHEDG-ISVDNCADASRQISAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+ ++  + +  G  V     L    ++   G ++  S
Sbjct: 63  LDVEDPITNEYDLEVSSPGVDRPLFKQDHYEQAQGEEVRVRTKLPQDGRRNFKGDLIAVS 122


>gi|89072573|ref|ZP_01159145.1| hypothetical protein SKA34_18649 [Photobacterium sp. SKA34]
 gi|89051677|gb|EAR57130.1| hypothetical protein SKA34_18649 [Photobacterium sp. SKA34]
          Length = 151

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 71/120 (59%), Gaps = 2/120 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +++P +  + F  V +  +   ++  L++F++ ++G + +  C E+S+ IS 
Sbjct: 3   ALETQLTEMLEPSVLALGFELVGLEFIRAGEHSTLRVFIDHENG-INVDGCAEVSRQISA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH     + ++ G+++K  G I+  
Sbjct: 62  VMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEANIVLKMAMGNRRKWKGDIVAV 121


>gi|212709947|ref|ZP_03318075.1| hypothetical protein PROVALCAL_00997 [Providencia alcalifaciens DSM
           30120]
 gi|212687459|gb|EEB46987.1| hypothetical protein PROVALCAL_00997 [Providencia alcalifaciens DSM
           30120]
          Length = 183

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 67/111 (60%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + F  V +  +  +   L+IF++ ++G +T+ DC ++S  +S +LDVE+
Sbjct: 41  LTEMVSAPVEALGFEFVGLEFVRGRTSTLRIFIDSEEG-ITVDDCADVSHQVSAVLDVED 99

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LE+SSPG++RP+   + + R+ G  VA  + ++  ++++  G I
Sbjct: 100 PISVIYNLEISSPGMERPLFTIAHYERFMGEEVALSLRIAMQNRRRWQGII 150


>gi|225374839|ref|ZP_03752060.1| hypothetical protein ROSEINA2194_00460 [Roseburia inulinivorans DSM
           16841]
 gi|225213300|gb|EEG95654.1| hypothetical protein ROSEINA2194_00460 [Roseburia inulinivorans DSM
           16841]
          Length = 162

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 58/88 (65%), Gaps = 2/88 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I P+++  +F  V +  ++E     L+++++++ G +T  DC ++S+ ++ ILD E+ +
Sbjct: 21  LITPILDRRNFELVDVEYVKEGSTWYLRVYIDKE-GGITSDDCADVSREMNEILDREDYV 79

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           EG Y  EVSSPG+ RP+ ++ D++R  G
Sbjct: 80  EGSYTFEVSSPGLGRPLKKEKDYIRSMG 107


>gi|317046739|ref|YP_004114387.1| hypothetical protein Pat9b_0506 [Pantoea sp. At-9b]
 gi|316948356|gb|ADU67831.1| protein of unknown function DUF150 [Pantoea sp. At-9b]
          Length = 202

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ ++G + + DC ++S  +S ++DVE+
Sbjct: 60  LTELISAPVEALGYELVGIEFIRGRTSTLRIYIDSEEG-INVDDCADVSHQVSAVMDVED 118

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 119 PITVAYNLEVSSPGLDRPLFTAEHYARFAGEEVGLVLRMAVQNRRKWQGII 169


>gi|171463769|ref|YP_001797882.1| protein of unknown function DUF150 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|226696205|sp|B1XV91|RIMP_POLNS RecName: Full=Ribosome maturation factor rimP
 gi|171193307|gb|ACB44268.1| protein of unknown function DUF150 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 163

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 6/112 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELSQAISPILDVENI 85
           VI   +E + +  V+I    E   LL++ +E  D    +T+ DCE++S  +S  L VENI
Sbjct: 6   VISAELENLGYSLVEIE--REAGGLLRVTIENPDYERLITVLDCEKVSHQLSYTLPVENI 63

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
              + RLE+SSPG+DRP+   +DF R+ G  V  ++ +++G+++   G++ G
Sbjct: 64  --PYERLEISSPGLDRPVKSAADFQRFAGMEVDLKLRVAAGNRKNFRGELQG 113


>gi|119944577|ref|YP_942257.1| hypothetical protein Ping_0815 [Psychromonas ingrahamii 37]
 gi|167016814|sp|A1ST43|RIMP_PSYIN RecName: Full=Ribosome maturation factor rimP
 gi|119863181|gb|ABM02658.1| hypothetical protein DUF150 [Psychromonas ingrahamii 37]
          Length = 153

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ P +E++ +  V +  +   K+  L++++++D+G + + DC  +S+ +S I+DVE
Sbjct: 8   LTEMLAPSVEDLGYELVGVEYIRAGKHSTLRVYIDQDEG-ILVDDCAAVSRQVSAIMDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG++RP+ +   +  + G  V  ++ +   ++++  G I+   +   
Sbjct: 67  DPITNEYSLEVSSPGMNRPLFKAEHYQIFAGEEVKIQLRMPIQNRRRWKGVIVSAEDEII 126

Query: 144 FLEKEKRGEK----DMNELQIAISFDS 166
            L  E R E+    ++ +  I   FD+
Sbjct: 127 CLNIEGREERFSLSNIQKANIVPKFDN 153


>gi|308173622|ref|YP_003920327.1| RNA-binding protein [Bacillus amyloliquefaciens DSM 7]
 gi|307606486|emb|CBI42857.1| putative RNA-binding protein [Bacillus amyloliquefaciens DSM 7]
 gi|328553446|gb|AEB23938.1| ribosome maturation protein RimP [Bacillus amyloliquefaciens TA208]
 gi|328911763|gb|AEB63359.1| putative RNA-binding protein [Bacillus amyloliquefaciens LL3]
          Length = 156

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + QP+++++    V I  ++E +N  L++F++ D+G + + +C ++S+A+S  LD  
Sbjct: 9   VQEMAQPILDDLQLELVDIEFVKEGQNWFLRVFIDSDNG-VDIEECAKVSEALSEKLDEA 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I  +Y LEVSSPG +RP+ +K+DF +  G  V
Sbjct: 68  DPITQNYFLEVSSPGAERPLKKKADFEKSLGKNV 101


>gi|302342323|ref|YP_003806852.1| hypothetical protein Deba_0888 [Desulfarculus baarsii DSM 2075]
 gi|301638936|gb|ADK84258.1| protein of unknown function DUF150 [Desulfarculus baarsii DSM 2075]
          Length = 161

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 5/127 (3%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I+PV+       V++    E    +L++FV+R  G +TL DC  +S+ +S +LDVE+ I
Sbjct: 19  LIEPVVRSEGLVLVELQWRPENAGQVLRLFVDRPAGGVTLDDCSLISRQVSDLLDVEDPI 78

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK---QKLIGKIMGTSETGF 143
            G YRLEVSSPG++R +    +++ + G  +A  ++   G+K   + L G+++G      
Sbjct: 79  GGAYRLEVSSPGLERRLKSAREYVIFAGR-MAKLVIRDDGEKSGNRVLHGRLLGLQGDDV 137

Query: 144 FLEKEKR 150
            +E + R
Sbjct: 138 LIEIDGR 144


>gi|15644523|ref|NP_229575.1| hypothetical protein TM1778 [Thermotoga maritima MSB8]
 gi|34223165|sp|Q9X299|RIMP_THEMA RecName: Full=Ribosome maturation factor rimP
 gi|4982356|gb|AAD36841.1|AE001815_15 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 150

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 4/104 (3%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E +  +L+I ++   G +++RDCE  S+ +   LD E+ IE  Y LEVSSPG+DRP+   
Sbjct: 33  ESRGWVLRIIIDNPVGYVSVRDCELFSREMERFLDREDFIEHSYTLEVSSPGLDRPLRGP 92

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            D++R+ G +      + + D +  IG+I    +    +  EKR
Sbjct: 93  RDYVRFTGKLAK----IVTKDGKTFIGRIESFVDGTITISDEKR 132


>gi|261392136|emb|CAX49636.1| conserved hypothetical protein [Neisseria meningitidis 8013]
          Length = 149

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 5/119 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           +G + DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S 
Sbjct: 3   IGSSMDIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSR 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  VE+I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 60  VFMVEDI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEG 116


>gi|291562552|emb|CBL41368.1| Uncharacterized protein conserved in bacteria [butyrate-producing
           bacterium SS3/4]
          Length = 155

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 2/139 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   + P++EE +F  V +  ++E     L+ +++++ G  T+ DCE +S+ +S  LD E
Sbjct: 11  VEKFLIPIMEENNFELVDVEYVKEAGTWYLRAYIDKE-GGFTVDDCEMVSRRLSDWLDKE 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+  Y LEVSSPG+ RP+ ++ DF R  G  V  ++  +   ++   G +        
Sbjct: 70  DFIDDSYILEVSSPGLGRPLKKEKDFKRSLGEAVDIKLYRAIERQKDFSGILTAYDADTV 129

Query: 144 FLEKEKRGEKDMNELQIAI 162
            +  E   E   N   IA+
Sbjct: 130 TIRYEDGSENTFNRKDIAL 148


>gi|52425501|ref|YP_088638.1| hypothetical protein MS1446 [Mannheimia succiniciproducens MBEL55E]
 gi|81386924|sp|Q65SK7|RIMP_MANSM RecName: Full=Ribosome maturation factor rimP
 gi|52307553|gb|AAU38053.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 151

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + ++++++++ G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 35  MTVRLYIDKE-GGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLEQFQ 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  ++  + +   D++K  GK+
Sbjct: 94  RYVGQEISVHLRIPMLDRRKWQGKL 118


>gi|68250160|ref|YP_249272.1| hypothetical protein NTHI1846 [Haemophilus influenzae 86-028NP]
 gi|145629345|ref|ZP_01785144.1| hypothetical protein CGSHi22121_11095 [Haemophilus influenzae
           22.1-21]
 gi|145641319|ref|ZP_01796898.1| hypothetical protein CGSHiR3021_04472 [Haemophilus influenzae
           R3021]
 gi|81335416|sp|Q4QK35|RIMP_HAEI8 RecName: Full=Ribosome maturation factor rimP
 gi|68058359|gb|AAX88612.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|144978848|gb|EDJ88571.1| hypothetical protein CGSHi22121_11095 [Haemophilus influenzae
           22.1-21]
 gi|145273862|gb|EDK13729.1| hypothetical protein CGSHiR3021_04472 [Haemophilus influenzae
           22.4-21]
 gi|301170016|emb|CBW29620.1| conserved protein [Haemophilus influenzae 10810]
          Length = 151

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F++++ G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 35  MTVRLFIDKE-GGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLPQFE 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +A  + +   +++K  GK+
Sbjct: 94  RYIGQDIAVHLRIPVMERRKWQGKL 118


>gi|317471573|ref|ZP_07930919.1| hypothetical protein HMPREF1011_01267 [Anaerostipes sp. 3_2_56FAA]
 gi|316900952|gb|EFV22920.1| hypothetical protein HMPREF1011_01267 [Anaerostipes sp. 3_2_56FAA]
          Length = 154

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 3/104 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P+I+E  F  V +  ++E  N  L+I+ +++ G +++ DC  +S+A+   LD ++ I
Sbjct: 14  LVTPIIDENHFELVDVEYVKEGANWYLRIYADKE-GGISIDDCVLISRALEAKLDADDFI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           +  Y LEVSSPG+ RP+ ++ DF R  G  V  ++   + DKQK
Sbjct: 73  KDAYILEVSSPGLGRPLKKEKDFQRSIGQSVDIKL-YKAIDKQK 115


>gi|242278480|ref|YP_002990609.1| hypothetical protein Desal_1005 [Desulfovibrio salexigens DSM 2638]
 gi|259585762|sp|C6C0D6|RIMP_DESAD RecName: Full=Ribosome maturation factor rimP
 gi|242121374|gb|ACS79070.1| protein of unknown function DUF150 [Desulfovibrio salexigens DSM
           2638]
          Length = 155

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 7/153 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           LA  +S  ++P IE M      + +       + I+++ ++G +++  C E+S+ +  +L
Sbjct: 6   LAKKVSQFVEPTIESMGLTLWGVEVTSANRPAVIIYIDSENG-VSIDQCAEVSRDVGLML 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VE +I+  Y LEVSSPG++R   +      + G  +   +V S   ++K  G +  T E
Sbjct: 65  EVEEVIDSAYVLEVSSPGLERKFFKPEQMSAYVGKKIDIALVFSLEGRKKFKGLLQETDE 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            G  L+ E +      E  I I +D +  A+LI
Sbjct: 125 EGLLLKLEDQ------EDPIKIEWDRIKKAKLI 151


>gi|307747095|gb|ADN90365.1| UPF0090 protein [Campylobacter jejuni subsp. jejuni M1]
          Length = 140

 Score = 64.3 bits (155), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I+V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +
Sbjct: 27  IYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V     +++ +K+K   KI+   +    LE  +  EK        I+F  +  A+
Sbjct: 86  SIGELVK----ITTNEKEKFEAKIIAVDDENITLENLENKEK------TTINFSDIRKAK 135

Query: 172 LIV 174
             V
Sbjct: 136 TFV 138


>gi|294634513|ref|ZP_06713048.1| hypothetical protein EDWATA_00308 [Edwardsiella tarda ATCC 23685]
 gi|291092027|gb|EFE24588.1| hypothetical protein EDWATA_00308 [Edwardsiella tarda ATCC 23685]
          Length = 140

 Score = 64.3 bits (155), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  ++  L+I+++ ++G +T+ DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRHSTLRIYIDSEEG-ITVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             Y LEVSSPG+DRP+     + R+    V   + ++  +++K  G I
Sbjct: 60  VAYNLEVSSPGMDRPLFTAEHYTRFLNEEVTLVLRMAMQNRRKWQGVI 107


>gi|298369369|ref|ZP_06980687.1| hypothetical protein HMPREF9016_01039 [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298283372|gb|EFI24859.1| hypothetical protein HMPREF9016_01039 [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 157

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 17/151 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +++   +  + +  V   L  + +L  +IF++++ G +T+ DC  +S  +S +  VE
Sbjct: 16  DIQNILDKTLPGLGYELVDFELTAQGDL--RIFIDKE-GGITVEDCATVSNHLSRVFTVE 72

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 73  DI--DYKRLEISSPGLDRPLKKAADFVRFAGRQAKIKTRLPIDGQKNFIGRI-------- 122

Query: 144 FLEKEKRGEKDM--NELQIAISFDSLLSARL 172
             E  K G   +  +   + I FD++  ARL
Sbjct: 123 --ENCKNGTVSISFDGKSVDIEFDNIDKARL 151


>gi|71281315|ref|YP_268926.1| hypothetical protein CPS_2201 [Colwellia psychrerythraea 34H]
 gi|91208404|sp|Q482U1|RIMP_COLP3 RecName: Full=Ribosome maturation factor rimP
 gi|71147055|gb|AAZ27528.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 151

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 2/123 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++P +EE       I  +    N +L++F++ ++G + + DC E+S+ +  ILDVE
Sbjct: 8   LTDLLRPAVEETGKTLHGIEYISAGNNSVLRLFIDHENG-INVDDCAEVSRQVGAILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+   + F    G  +  +I +    ++K  G ++       
Sbjct: 67  DPISSEYSLEVSSPGVDRPLFELAHFQEVIGETINVKISMPLNGRRKFKGPLVAIENDTL 126

Query: 144 FLE 146
            +E
Sbjct: 127 IVE 129


>gi|170288838|ref|YP_001739076.1| hypothetical protein TRQ2_1046 [Thermotoga sp. RQ2]
 gi|281412458|ref|YP_003346537.1| protein of unknown function DUF150 [Thermotoga naphthophila RKU-10]
 gi|226734063|sp|B1LAP5|RIMP_THESQ RecName: Full=Ribosome maturation factor rimP
 gi|170176341|gb|ACB09393.1| protein of unknown function DUF150 [Thermotoga sp. RQ2]
 gi|281373561|gb|ADA67123.1| protein of unknown function DUF150 [Thermotoga naphthophila RKU-10]
          Length = 150

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E +  +L+I ++   G +++RDCE  S+ +   LD E++IE  Y LEVSSPG+DRP+   
Sbjct: 33  ESRGWILRIIIDNPMGYVSVRDCELFSREMERFLDREDLIEHSYTLEVSSPGLDRPLRGP 92

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            D++R+ G +      + + D +  IG+I
Sbjct: 93  RDYVRFTGKLAK----IVTKDGKTFIGRI 117


>gi|15677490|ref|NP_274646.1| hypothetical protein NMB1641 [Neisseria meningitidis MC58]
 gi|218768663|ref|YP_002343175.1| hypothetical protein NMA1895 [Neisseria meningitidis Z2491]
 gi|304386890|ref|ZP_07369152.1| protein of hypothetical function DUF150 [Neisseria meningitidis
           ATCC 13091]
 gi|54040272|sp|P67217|RIMP_NEIMB RecName: Full=Ribosome maturation factor rimP
 gi|54042665|sp|P67216|RIMP_NEIMA RecName: Full=Ribosome maturation factor rimP
 gi|7226891|gb|AAF41990.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|121052671|emb|CAM09012.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
 gi|304339049|gb|EFM05141.1| protein of hypothetical function DUF150 [Neisseria meningitidis
           ATCC 13091]
          Length = 149

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 5/119 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           +G + DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S 
Sbjct: 3   IGSSMDIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKESG-ITVEDCATVSNHLSR 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  VE+I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 60  VFMVEDI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEG 116


>gi|322514416|ref|ZP_08067459.1| hypothetical protein HMPREF0027_1211 [Actinobacillus ureae ATCC
           25976]
 gi|322119664|gb|EFX91722.1| hypothetical protein HMPREF0027_1211 [Actinobacillus ureae ATCC
           25976]
          Length = 153

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           L ++++++++ G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     + 
Sbjct: 35  LTVRLYIDKE-GGVTIDDCSDVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLVHYQ 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  V   + +   D++K  GK+
Sbjct: 94  RFIGQEVVIHLCIPMFDRRKWQGKL 118


>gi|262066536|ref|ZP_06026148.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291379770|gb|EFE87288.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 156

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ ++ P +EEM+   V +  L++     +++F+E  +G +++ DC +LS  I     VE
Sbjct: 11  ITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRVFIENLNGELSIEDCSKLSSKIED--RVE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            +IE  + LEVSSPG++R + +  D++R+ G  +   +     DK++ 
Sbjct: 69  ELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKMNDKKQF 116


>gi|329295929|ref|ZP_08253265.1| hypothetical protein Pstas_03447 [Plautia stali symbiont]
          Length = 150

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ ++G + + DC ++S  +S ++
Sbjct: 4   LEQKLTELISAPVEALGYELVGIEFIRGRTSTLRIYIDSEEG-INVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           DVE+ I   Y LEVSSPG DRP+     + R+ G  V+  + ++  +++K  G I
Sbjct: 63  DVEDPITVAYNLEVSSPGFDRPLFTAEHYARFAGEEVSLVLRMAVQNRRKWQGII 117


>gi|269123543|ref|YP_003306120.1| hypothetical protein Smon_0773 [Streptobacillus moniliformis DSM
           12112]
 gi|268314869|gb|ACZ01243.1| protein of unknown function DUF150 [Streptobacillus moniliformis
           DSM 12112]
          Length = 164

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 12/164 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   IQP + E S     I  + E     L+I+VE  +GN +L DC  LS  I  I+D  
Sbjct: 8   IEKEIQPYLNENSLELADIEYVREGGYNFLRIYVESKNGNTSLDDCVMLSTKIDNIVD-- 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +I+  + LEVS+PG++R + ++ DF+R+ G  ++ +   +  +K+   G ++G  E G 
Sbjct: 66  ELIDDKFYLEVSTPGLERKLKKEKDFIRFTGKKISVKTKSNVENKKSFEGILLGF-ENGK 124

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI--VTDELLRASLNN 185
            L K+     D+ E  + I  + +  A+L+  ++D++ +  + N
Sbjct: 125 ILIKD-----DIIE-NVEIPLEKIKVAKLVFNLSDKIFKEDVEN 162


>gi|218133588|ref|ZP_03462392.1| hypothetical protein BACPEC_01457 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990963|gb|EEC56969.1| hypothetical protein BACPEC_01457 [Bacteroides pectinophilus ATCC
           43243]
          Length = 155

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 61/95 (64%), Gaps = 2/95 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I P+I+   F  V +  ++E  +  L++++++D G +T+ DCE++S+A + ILD E+ I
Sbjct: 14  LITPLIDAEGFELVDVEYVKEGADWYLRVYIDKD-GGITVNDCEKISRAFNEILDREDYI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           +  Y  EVSSPG+ RP+ +  D+ R  G ++  ++
Sbjct: 73  DDAYIFEVSSPGLLRPLKKDKDYQRNLGKLLEVKL 107


>gi|307245493|ref|ZP_07527580.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254447|ref|ZP_07536284.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258906|ref|ZP_07540637.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853552|gb|EFM85770.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862588|gb|EFM94545.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866930|gb|EFM98787.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 153

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           L ++++++++ G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+   + + 
Sbjct: 35  LTVRLYIDKE-GGVTIDDCSDVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLAHYQ 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +   + +   D++K  GK+
Sbjct: 94  RFIGQEIVIHLRIPMFDRRKWQGKL 118


>gi|302039406|ref|YP_003799728.1| hypothetical protein NIDE4135 [Candidatus Nitrospira defluvii]
 gi|300607470|emb|CBK43803.1| conserved protein of unknown function DUF150 [Candidatus Nitrospira
           defluvii]
          Length = 159

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 6/148 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  +  P+++      V+ + + +    ++++F+++  G +TL DCE+  +++SP LDV 
Sbjct: 11  IQEIAAPILQSHGLELVEAVCVGQGPRTVIRVFIDKP-GGITLTDCEQAHRSLSPALDVI 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +     Y LE+SSPG+DRP+    D+ R  G  V  ++      + +L+G ++   + G 
Sbjct: 70  DPFPHAYTLEISSPGLDRPLRSVQDYRRLIGKPVTLKLREPIQAQWRLVGAVVEVDDRGV 129

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSAR 171
            L  +++   +     I + FD +  AR
Sbjct: 130 TLGIQQKKTTET----IRVEFDQIALAR 153


>gi|330504829|ref|YP_004381698.1| hypothetical protein MDS_3915 [Pseudomonas mendocina NK-01]
 gi|328919115|gb|AEB59946.1| hypothetical protein MDS_3915 [Pseudomonas mendocina NK-01]
          Length = 152

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 61/98 (62%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PVIE + ++   I  L + ++ LL++++++ DG + + DCE +S+ +S +LDVE
Sbjct: 8   LQALLAPVIEALGYQCWGIEFLSQGRHSLLRVYIDKADG-ILIDDCEIVSRQLSGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG+DRP+     F    G  V  ++
Sbjct: 67  DPISSEYTLEVSSPGMDRPLFTLEQFAAHVGEQVKIKL 104


>gi|303249648|ref|ZP_07335853.1| hypothetical protein APP6_1055 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303253713|ref|ZP_07339850.1| hypothetical protein APP2_0900 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247607|ref|ZP_07529650.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307252188|ref|ZP_07534086.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256658|ref|ZP_07538437.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302647438|gb|EFL77657.1| hypothetical protein APP2_0900 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302651460|gb|EFL81611.1| hypothetical protein APP6_1055 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306855877|gb|EFM88037.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860332|gb|EFM92347.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306864706|gb|EFM96610.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 153

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           L ++++++++ G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     + 
Sbjct: 35  LTVRLYIDKE-GGVTIDDCSDVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLKHYQ 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  V   + +   D++K  GK+
Sbjct: 94  RFIGQEVVIHLRIPMFDRRKWQGKL 118


>gi|319637702|ref|ZP_07992468.1| hypothetical protein HMPREF0604_00091 [Neisseria mucosa C102]
 gi|317400857|gb|EFV81512.1| hypothetical protein HMPREF0604_00091 [Neisseria mucosa C102]
          Length = 143

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 65/112 (58%), Gaps = 5/112 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  + +L  +IF++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDKTLPGLGYELVDFELTAQGDL--RIFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I
Sbjct: 59  DI--DYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRI 108


>gi|332799220|ref|YP_004460719.1| Ribosome maturation factor rimP [Tepidanaerobacter sp. Re1]
 gi|332696955|gb|AEE91412.1| Ribosome maturation factor rimP [Tepidanaerobacter sp. Re1]
          Length = 157

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 2/103 (1%)

Query: 32  VIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
            +E   F  + +  ++E  N  L+ ++++  G +T+ DC+ +S  +  +LD+ ++I   Y
Sbjct: 17  AVEAAGFELIDMEFVKESGNWYLRYYIDKP-GGITIDDCQTVSVEVGRLLDIADLIPCSY 75

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            LEVSSPG++RP+    DFLR+ G  V  +     GDK+   G
Sbjct: 76  ILEVSSPGLERPIKTDKDFLRYIGSFVEIKTFEKIGDKKVFTG 118


>gi|146308625|ref|YP_001189090.1| hypothetical protein Pmen_3610 [Pseudomonas mendocina ymp]
 gi|166990870|sp|A4XYE2|RIMP_PSEMY RecName: Full=Ribosome maturation factor rimP
 gi|145576826|gb|ABP86358.1| protein of unknown function DUF150 [Pseudomonas mendocina ymp]
          Length = 152

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 61/98 (62%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PVIE + ++   I  L + ++ LL++++++ DG + + DCE +S+ +S +LDVE
Sbjct: 8   LQALLAPVIEALGYQCWGIEFLSQGRHSLLRVYIDKADG-ILIDDCEIVSRQLSGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG+DRP+     F    G  V  ++
Sbjct: 67  DPISSEYTLEVSSPGMDRPLFTLEQFAAHVGEQVKIKL 104


>gi|328953956|ref|YP_004371290.1| Ribosome maturation factor rimP [Desulfobacca acetoxidans DSM
           11109]
 gi|328454280|gb|AEB10109.1| Ribosome maturation factor rimP [Desulfobacca acetoxidans DSM
           11109]
          Length = 153

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 66/118 (55%), Gaps = 2/118 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           + G ++ +I PV++      V+   +   +  +L++F+++  G ++L DC  LS  +  +
Sbjct: 6   VTGRVTELILPVLQAHDVELVETEFVRAGRRYILRLFLDKP-GGISLEDCAYLSNLLGEL 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +DV ++I   Y LEVSSPG+ RP+ +  DF R+ G +V   +    G +    G+++G
Sbjct: 65  IDVHDVIRHAYILEVSSPGLTRPIKKIEDFSRYAGRLVRITVRGGVGKRSLYRGELLG 122


>gi|251792721|ref|YP_003007447.1| hypothetical protein NT05HA_0985 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534114|gb|ACS97360.1| protein YhbC [Aggregatibacter aphrophilus NJ8700]
          Length = 151

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 56/87 (64%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           + L +++F++++ G +T+ DC  +S+ +S +LDVE+ I   Y LEVSSPG+DRP+   + 
Sbjct: 33  RYLTVRLFIDKE-GGVTVEDCAYVSRQVSAVLDVEDPIADKYNLEVSSPGLDRPLFTLNQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           F R+ G  +   + +   D++K  G++
Sbjct: 92  FERYLGQEILLHLRIPVADRRKWQGQL 118


>gi|84624710|ref|YP_452082.1| hypothetical protein XOO_3053 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|161898973|ref|YP_201860.2| hypothetical protein XOO3221 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|91208349|sp|Q5GXU6|RIMP_XANOR RecName: Full=Ribosome maturation factor rimP
 gi|91208413|sp|Q2P0W9|RIMP_XANOM RecName: Full=Ribosome maturation factor rimP
 gi|259645271|sp|B2SVK5|RIMP_XANOP RecName: Full=Ribosome maturation factor rimP
 gi|84368650|dbj|BAE69808.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 196

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 82/159 (51%), Gaps = 14/159 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P ++ +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVDSLGVELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I GHY LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGHYTLEVSSPGVDRPLFTLEQFARHAGESTKIVLKLAQDGRRRFQGEI 124

Query: 136 MGT-SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   +E G  +         ++   + I FD++  AR++
Sbjct: 125 LRIDAEAGAVVFA-------IDGKDVQIGFDNIDKARIL 156


>gi|325915553|ref|ZP_08177864.1| hypothetical protein XVE_1758 [Xanthomonas vesicatoria ATCC 35937]
 gi|325538269|gb|EGD09954.1| hypothetical protein XVE_1758 [Xanthomonas vesicatoria ATCC 35937]
          Length = 196

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 12/158 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHAGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           + T      +     G+       + I FD++  AR++
Sbjct: 125 LRTETEADAVVFSVDGK------DVQIGFDNIDKARIL 156


>gi|295396944|ref|ZP_06807066.1| protein of hypothetical function DUF150 [Aerococcus viridans ATCC
           11563]
 gi|294974797|gb|EFG50502.1| protein of hypothetical function DUF150 [Aerococcus viridans ATCC
           11563]
          Length = 179

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)

Query: 4   THFLH-SKYEPR-IFGDMGLAGD-ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER 59
            HF H +K + R   G+M    D +  ++QP+IE++ F    I  ++E K+  L+I+V++
Sbjct: 5   AHFFHGNKVKIRKARGNMAKVTDQMQEIVQPIIEDLGFILFDIEFVKEGKSWFLRIYVDK 64

Query: 60  DDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             G + + DC  +S+ IS  +D    + I   Y LEVSSPG +RP+    D     G  V
Sbjct: 65  PGGGIAIEDCVTVSEHISEAVDQLETDPIPQAYYLEVSSPGAERPLKNDDDVQAAIGEWV 124

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEK 153
                 +   ++ + G+++  S+  + +E + +  K
Sbjct: 125 FLSFYQAIDGQKNIQGRLLSVSDDAYEVETKDKTRK 160


>gi|166364177|ref|YP_001656450.1| YhbC family protein [Microcystis aeruginosa NIES-843]
 gi|226734161|sp|B0JU70|RIMP_MICAN RecName: Full=Ribosome maturation factor rimP
 gi|166086550|dbj|BAG01258.1| YhbC family protein [Microcystis aeruginosa NIES-843]
          Length = 156

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 9/143 (6%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P+ E +    V I     K   +L++ +    G+  L DCE++S+A+   LD + I+ G 
Sbjct: 15  PIAENLGLEVVDIVFQTNKRPPVLRVDIRNLAGDTGLEDCEQMSRALETALDSQEILPGA 74

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LE+SSPGI R +  + +F  + G  V      S G  Q+  GK+ G  E   +L ++ 
Sbjct: 75  YVLEISSPGISRQLSSEREFQSFKGFPVIVTGQDSQGKPQEWRGKLQGRDEQSIYLNQKG 134

Query: 150 RGEKDMNELQIAISFDSLLSARL 172
           R         + I   +++S RL
Sbjct: 135 RS--------LTIDRTTVISVRL 149


>gi|84387287|ref|ZP_00990308.1| hypothetical protein V12B01_22696 [Vibrio splendidus 12B01]
 gi|86148619|ref|ZP_01066902.1| hypothetical protein MED222_21704 [Vibrio sp. MED222]
 gi|218710447|ref|YP_002418068.1| hypothetical protein VS_2484 [Vibrio splendidus LGP32]
 gi|254765031|sp|B7VJH9|RIMP_VIBSL RecName: Full=Ribosome maturation factor rimP
 gi|84377934|gb|EAP94796.1| hypothetical protein V12B01_22696 [Vibrio splendidus 12B01]
 gi|85833610|gb|EAQ51785.1| hypothetical protein MED222_21704 [Vibrio sp. MED222]
 gi|218323466|emb|CAV19643.1| conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 151

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 55/83 (66%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+I+++  +G + + DC E+S  +S ++DVE+ I   Y LEVSSPG++RP+ +   + ++
Sbjct: 37  LRIYIDSPNG-INVDDCSEVSHQVSAVMDVEDPISVAYNLEVSSPGLERPLFKAEHYQQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 96  IGHEVSIVLKMAVGNRRKWKGDI 118


>gi|319937396|ref|ZP_08011803.1| hypothetical protein HMPREF9488_02638 [Coprobacillus sp. 29_1]
 gi|319807762|gb|EFW04355.1| hypothetical protein HMPREF9488_02638 [Coprobacillus sp. 29_1]
          Length = 153

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+S+IQP+++        I  + EKN   L+IF+E++DG++ +  C  +S+ IS  LD E
Sbjct: 5   ITSLIQPILDNHDVYLDDIEYVSEKNEWYLRIFIEKNDGHLDMDTCVAVSEDISLKLDEE 64

Query: 84  NIIEGHYRLEVSSPGIDRPM 103
           +II   Y LEVSSPG ++P+
Sbjct: 65  DIITNEYYLEVSSPGAEKPL 84


>gi|296315230|ref|ZP_06865171.1| hypothetical protein NEIPOLOT_02434 [Neisseria polysaccharea ATCC
           43768]
 gi|296837868|gb|EFH21806.1| hypothetical protein NEIPOLOT_02434 [Neisseria polysaccharea ATCC
           43768]
          Length = 143

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPIDGQKNFIGKIEG 110


>gi|294500901|ref|YP_003564601.1| hypothetical protein BMQ_4155 [Bacillus megaterium QM B1551]
 gi|294350838|gb|ADE71167.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 156

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 60/94 (63%), Gaps = 3/94 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++EEM+   V+I  ++E K+  L++F++ D+G + + DC  +S+ +S  +D  
Sbjct: 9   VEEMVSPILEEMNLELVEIEYVKEGKDWFLRVFIDSDNG-VDIEDCGAVSEKLSEKMDAV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG-HV 116
           + I  +Y LEVSSPG +RP+ +  DF R  G HV
Sbjct: 68  DPIPHNYFLEVSSPGAERPLKKDKDFERAIGKHV 101


>gi|253997781|ref|YP_003049844.1| hypothetical protein Msip34_0068 [Methylovorus sp. SIP3-4]
 gi|313199845|ref|YP_004038503.1| hypothetical protein MPQ_0074 [Methylovorus sp. MP688]
 gi|253984460|gb|ACT49317.1| protein of unknown function DUF150 [Methylovorus sp. SIP3-4]
 gi|312439161|gb|ADQ83267.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 145

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 74/125 (59%), Gaps = 3/125 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+ S+++  + ++ +  V + +   +  L+++F+++ +G + + DC  +S  +  +L VE
Sbjct: 3   DLYSLLEKSVSQLGYELVDVEI-SNRGKLIRLFIDKPEG-INIDDCVLVSNQLGNVLAVE 60

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N I+ + RLEVSSPG+DR + + +DF+R+ G     ++ +   +++  IG + G  +   
Sbjct: 61  NDID-YDRLEVSSPGLDRVLKKDADFIRFTGERAQVKLRIPVDNRKNFIGILQGIEQDNL 119

Query: 144 FLEKE 148
            +E+E
Sbjct: 120 LIEQE 124


>gi|197335158|ref|YP_002155239.1| protein VV1_1694 [Vibrio fischeri MJ11]
 gi|226707621|sp|B5FA77|RIMP_VIBFM RecName: Full=Ribosome maturation factor rimP
 gi|197316648|gb|ACH66095.1| protein VV1_1694 [Vibrio fischeri MJ11]
          Length = 151

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L++F++ ++G + + DC E S+ IS ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRVFIDHENG-IFVEDCAEASRQISAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKIM 136
            GH V+  + +   +++K  G I+
Sbjct: 96  VGHEVSLVLKMPMNNRRKWKGDIL 119


>gi|59711091|ref|YP_203867.1| hypothetical protein VF_0484 [Vibrio fischeri ES114]
 gi|75354545|sp|Q5E7L7|RIMP_VIBF1 RecName: Full=Ribosome maturation factor rimP
 gi|59479192|gb|AAW84979.1| YhbC-like protein [Vibrio fischeri ES114]
          Length = 151

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L++F++ ++G + + DC E S+ IS ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRVFIDHENG-IFVEDCAEASRQISAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKIM 136
            GH V+  + +   +++K  G I+
Sbjct: 96  VGHEVSLVLKMPMNNRRKWKGDIL 119


>gi|260654722|ref|ZP_05860210.1| hypothetical protein GCWU000246_00656 [Jonquetella anthropi E3_33
           E1]
 gi|260630437|gb|EEX48631.1| hypothetical protein GCWU000246_00656 [Jonquetella anthropi E3_33
           E1]
          Length = 173

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 8/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L G+++++++PV+ E+ +R   + L E  ++ +++F++  +G +T  DCE +S+AI P+L
Sbjct: 8   LRGELTALLKPVVVELGYRWEGLQLEEIGSMTVRVFIDGPNG-VTADDCEVVSKAIDPLL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +        Y LEVSSPG++R +    D+ R+ G              ++L G +    E
Sbjct: 67  EGAMADSNRYYLEVSSPGLERFLFELDDYRRFIGETARIRFHGEGSHIKRLTGVVEAVDE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            G       R      E   AI F+ ++   L+
Sbjct: 127 EG-------RVTIHTEEETAAIPFEDIVEGSLV 152


>gi|209694188|ref|YP_002262116.1| hypothetical protein VSAL_I0596 [Aliivibrio salmonicida LFI1238]
 gi|226707769|sp|B6ENE0|RIMP_ALISL RecName: Full=Ribosome maturation factor rimP
 gi|208008139|emb|CAQ78281.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 151

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L++F++ ++G + + DC E S+ IS ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRVFIDHENG-IFVEDCAEASRQISAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKIM 136
            GH V+  + +   +++K  G I+
Sbjct: 96  VGHEVSLVLKMPMNNRRKWKGDIL 119


>gi|289665187|ref|ZP_06486768.1| hypothetical protein XcampvN_19489 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667365|ref|ZP_06488440.1| hypothetical protein XcampmN_02313 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 196

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 14/159 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHAGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MGT-SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   +E G  +        D  E+QI   FD++  AR++
Sbjct: 125 LRIDAEAGAVVFA-----VDGKEVQIG--FDNIDKARIL 156


>gi|330830890|ref|YP_004393842.1| ribosome maturation factor rimP [Aeromonas veronii B565]
 gi|328806026|gb|AEB51225.1| Ribosome maturation factor rimP [Aeromonas veronii B565]
          Length = 145

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 56/87 (64%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+  L+++++ + G +T+ +C E+S  +  I+DVE+ I   Y LEVSSPG+DRP+ + + 
Sbjct: 26  KHSTLRVYIDGEQG-VTVENCAEVSHQVGAIMDVEDPITEEYYLEVSSPGLDRPLFKVAH 84

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           F ++ G   A  + +++ +++K  G I
Sbjct: 85  FEKYVGQEAAVTLRMATNNRRKFKGVI 111


>gi|152978791|ref|YP_001344420.1| hypothetical protein Asuc_1119 [Actinobacillus succinogenes 130Z]
 gi|171704316|sp|A6VND8|RIMP_ACTSZ RecName: Full=Ribosome maturation factor rimP
 gi|150840514|gb|ABR74485.1| protein of unknown function DUF150 [Actinobacillus succinogenes
           130Z]
          Length = 151

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F++++ G +++ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+   S + 
Sbjct: 35  MTVRLFIDKE-GGVSVDDCADVSRQVSAILDVEDPITDKYNLEVSSPGLDRPLFTLSQYE 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +   + +   D++K  GK+
Sbjct: 94  RFIGEDITIHLRIPVSDRRKWQGKL 118


>gi|325578297|ref|ZP_08148432.1| YhbC family protein [Haemophilus parainfluenzae ATCC 33392]
 gi|301156200|emb|CBW15671.1| conserved protein [Haemophilus parainfluenzae T3T1]
 gi|325160033|gb|EGC72162.1| YhbC family protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 151

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F++++ G + + DC ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 35  MTVRLFIDKE-GGVGVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLEQFQ 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +A  + +   D++K  GK+
Sbjct: 94  RYVGEDIAVHLRIPVLDRRKWQGKL 118


>gi|88797621|ref|ZP_01113210.1| hypothetical protein MED297_10726 [Reinekea sp. MED297]
 gi|88779793|gb|EAR10979.1| hypothetical protein MED297_10726 [Reinekea sp. MED297]
          Length = 155

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 72/127 (56%), Gaps = 2/127 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +++ +I+PV+  M F    +  +   N   L+I+++ +DG + +  C ++S+ +S +LDV
Sbjct: 10  ELTDLIEPVVIGMGFLLWGVEYIPSGNYSTLRIYIDHEDG-IQVDQCADVSRQVSAVLDV 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I  +Y LEVSSPG+DRP+     +  + G  V  ++  +   ++K  G ++G  +  
Sbjct: 69  EDPISSNYTLEVSSPGMDRPLFTLEQYAAYIGEWVDIKLRYAFEGRRKFKGVLVGIEDGD 128

Query: 143 FFLEKEK 149
             ++ +K
Sbjct: 129 VIVQVDK 135


>gi|269120927|ref|YP_003309104.1| hypothetical protein Sterm_2319 [Sebaldella termitidis ATCC 33386]
 gi|268614805|gb|ACZ09173.1| protein of unknown function DUF150 [Sebaldella termitidis ATCC
           33386]
          Length = 157

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 3/114 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I   I   ++EM+     +  + E     L+I++ER DG  ++ DC   S+ I P+  +
Sbjct: 7   EIEKTIASYLDEMNLELADLEYVPEGGYNYLRIYIERVDGVTSIEDCVSFSEKIDPL--I 64

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           E+ I+  + LEVS+PGI+R + ++ DFLR+ G  +   +     DK+ L G ++
Sbjct: 65  EDFIKDKFFLEVSTPGIERRLRKEKDFLRFKGKKIRLALKSKVNDKKVLTGDLV 118


>gi|239944686|ref|ZP_04696623.1| hypothetical protein SrosN15_27072 [Streptomyces roseosporus NRRL
           15998]
 gi|239991149|ref|ZP_04711813.1| hypothetical protein SrosN1_27849 [Streptomyces roseosporus NRRL
           11379]
 gi|291448147|ref|ZP_06587537.1| UPF0090 protein [Streptomyces roseosporus NRRL 15998]
 gi|291351094|gb|EFE77998.1| UPF0090 protein [Streptomyces roseosporus NRRL 15998]
          Length = 167

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 9/151 (5%)

Query: 25  ISSVIQPVI--EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +  +++P++  +E+    +++S    + +L ++ V+ D+G + L  C ELS+AIS  LD 
Sbjct: 9   LRGLLEPLVSAQELDLEEIEVSRAGRRGVL-RVIVDSDEG-VELDACAELSRAISQKLDE 66

Query: 83  ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + + EG Y LEVSSPG DRP+     ++R  G +      L+     +L+ +I+   E 
Sbjct: 67  TDAMGEGEYVLEVSSPGADRPLTEHRHYVRATGRL--ARFHLTGDGSGELVARILAVDED 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G  LE    G K        ++FD +  AR+
Sbjct: 125 GLDLEVP--GVKGRKPTARRLAFDEIAKARV 153


>gi|225075065|ref|ZP_03718264.1| hypothetical protein NEIFLAOT_00064 [Neisseria flavescens
           NRL30031/H210]
 gi|224953549|gb|EEG34758.1| hypothetical protein NEIFLAOT_00064 [Neisseria flavescens
           NRL30031/H210]
          Length = 143

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 65/112 (58%), Gaps = 5/112 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  + +L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDKTLPGLGYELVDFELTAQGDL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I
Sbjct: 59  DI--DYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRI 108


>gi|148976709|ref|ZP_01813396.1| hypothetical protein VSWAT3_19956 [Vibrionales bacterium SWAT-3]
 gi|145964060|gb|EDK29318.1| hypothetical protein VSWAT3_19956 [Vibrionales bacterium SWAT-3]
          Length = 151

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 55/83 (66%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+I+++  +G + + DC E+S  +S ++DVE+ I   Y LEVSSPG++RP+ +   + ++
Sbjct: 37  LRIYIDSPNG-INVDDCAEVSHQVSAVMDVEDPISVAYNLEVSSPGLERPLFKAEHYQQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++ G+++K  G I
Sbjct: 96  IGHEVSIVLKMAVGNRRKWKGDI 118


>gi|289578390|ref|YP_003477017.1| hypothetical protein Thit_1191 [Thermoanaerobacter italicus Ab9]
 gi|297544666|ref|YP_003676968.1| hypothetical protein Tmath_1242 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528103|gb|ADD02455.1| protein of unknown function DUF150 [Thermoanaerobacter italicus
           Ab9]
 gi|296842441|gb|ADH60957.1| protein of unknown function DUF150 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 151

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 76/138 (55%), Gaps = 3/138 (2%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
             ++ P++E+ +F  V +   +E  N  L+++++++ G +TL DC+ +S+ +S  LD  +
Sbjct: 9   KDLVTPILEKNNFELVDVEYKKEGNNWYLRVYIDKE-GGITLDDCQLVSEYLSDRLDEVD 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETGF 143
            IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++  T +   
Sbjct: 68  PIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYSPIDKRKKFEGELIEFTGDKII 127

Query: 144 FLEKEKRGEKDMNELQIA 161
            L   +R E DM  + + 
Sbjct: 128 ILYNGERKEFDMKNVSLV 145


>gi|212634072|ref|YP_002310597.1| hypothetical protein swp_1216 [Shewanella piezotolerans WP3]
 gi|212555556|gb|ACJ28010.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 141

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L+++++ + G + + DC E S+ +S ++DVE+ I   Y LEVSSPG+DRP+     
Sbjct: 23  KHSILRLYIDNEKG-IFIEDCAETSRQVSAVMDVEDPISTEYTLEVSSPGVDRPLFTAEQ 81

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           +  + G  V  ++ +     + L G ++G       L        D NEL IA+  D++ 
Sbjct: 82  YQLYIGETVKVQVTMPVAGSRNLKGTVIGIEGQMLTL------SVDGNELIIAL--DNIR 133

Query: 169 SARLI 173
              LI
Sbjct: 134 KGNLI 138


>gi|168184628|ref|ZP_02619292.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|237795858|ref|YP_002863410.1| hypothetical protein CLJ_B2647 [Clostridium botulinum Ba4 str. 657]
 gi|259585740|sp|C3L0C0|RIMP_CLOB6 RecName: Full=Ribosome maturation factor rimP
 gi|182672272|gb|EDT84233.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|229262492|gb|ACQ53525.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
          Length = 153

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 72/122 (59%), Gaps = 2/122 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++   I+P++E +++    I  ++E K   L+I+++ ++G ++L  CE++S+A+S +
Sbjct: 6   LIENLKKQIEPIVEGLNYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAVSEL 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +  S   K+K  G+++  +
Sbjct: 65  LDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSSIDKKKKYEGELVDFN 124

Query: 140 ET 141
           E 
Sbjct: 125 EN 126


>gi|293390260|ref|ZP_06634594.1| protein YhbC [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950794|gb|EFE00913.1| protein YhbC [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 151

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 57/88 (64%), Gaps = 1/88 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           + L +++F++++ G +T+ DC ++S+ +S +LDVE+ I   Y LEVSSPG+DRP+   + 
Sbjct: 33  RYLTVRLFIDKE-GGVTVEDCADVSRQVSAVLDVEDPIADKYNLEVSSPGLDRPLFTLAQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             R+ G  +   + +   D++K  G+++
Sbjct: 92  CARYVGQEILVHLRIPVADRRKWQGELV 119


>gi|241760269|ref|ZP_04758364.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|261379746|ref|ZP_05984319.1| hypothetical protein NEISUBOT_03607 [Neisseria subflava NJ9703]
 gi|241319147|gb|EER55625.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|284797424|gb|EFC52771.1| hypothetical protein NEISUBOT_03607 [Neisseria subflava NJ9703]
          Length = 143

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 65/112 (58%), Gaps = 5/112 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  + +L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDKTLPGLGYELVDFELTAQGDL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I
Sbjct: 59  DI--DYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRI 108


>gi|170719905|ref|YP_001747593.1| hypothetical protein PputW619_0719 [Pseudomonas putida W619]
 gi|259586190|sp|B1J268|RIMP_PSEPW RecName: Full=Ribosome maturation factor rimP
 gi|169757908|gb|ACA71224.1| protein of unknown function DUF150 [Pseudomonas putida W619]
          Length = 169

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 60/98 (61%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + ++   I  + + K+ +L+I+++++ G + + DCE +S+  S ILDVE
Sbjct: 25  LQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE-GGILVEDCEAVSRQASAILDVE 83

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG+DRP+     F    G  V  ++
Sbjct: 84  DPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKL 121


>gi|313667983|ref|YP_004048267.1| hypothetical protein NLA_6440 [Neisseria lactamica ST-640]
 gi|309378388|emb|CBX22989.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313005445|emb|CBN86880.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 143

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEG 110


>gi|308389760|gb|ADO32080.1| hypothetical protein NMBB_1873 [Neisseria meningitidis alpha710]
 gi|325134693|gb|EGC57332.1| hypothetical protein NMBM13399_0599 [Neisseria meningitidis M13399]
 gi|325198740|gb|ADY94196.1| conserved hypothetical protein [Neisseria meningitidis G2136]
          Length = 143

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEG 110


>gi|261400894|ref|ZP_05987019.1| hypothetical protein NEILACOT_04263 [Neisseria lactamica ATCC
           23970]
 gi|269209253|gb|EEZ75708.1| hypothetical protein NEILACOT_04263 [Neisseria lactamica ATCC
           23970]
          Length = 143

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEG 110


>gi|159027909|emb|CAO89716.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 156

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+  +  P+ E +    V I     K   +L++ +    G+  L DCE++S+++   
Sbjct: 5   LIPDLLHLATPIAENLGLEVVDIVFQTNKRPPVLRVDIRNLAGDTGLEDCEQMSRSLETA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD + I+ G Y LE+SSPGI R +  + +F  + G  V      S G  Q+  GK+ G  
Sbjct: 65  LDSQEILPGAYVLEISSPGISRQLSSEREFHSFKGFPVIVTGQDSQGKPQEWRGKLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L ++ R         + I   +++S RL
Sbjct: 125 EQSIYLNQKGRS--------LTIDRTTVISVRL 149


>gi|121635281|ref|YP_975526.1| hypothetical protein NMC1555 [Neisseria meningitidis FAM18]
 gi|259585799|sp|A1KV49|RIMP_NEIMF RecName: Full=Ribosome maturation factor rimP
 gi|120866987|emb|CAM10750.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
 gi|325128689|gb|EGC51555.1| hypothetical protein NMXN1568_0547 [Neisseria meningitidis N1568]
 gi|325132775|gb|EGC55457.1| hypothetical protein NMBM6190_0488 [Neisseria meningitidis M6190]
 gi|325136709|gb|EGC59309.1| hypothetical protein NMBM0579_0602 [Neisseria meningitidis M0579]
 gi|325138661|gb|EGC61217.1| hypothetical protein NMBES14902_0645 [Neisseria meningitidis
           ES14902]
 gi|325205640|gb|ADZ01093.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
          Length = 143

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEG 110


>gi|296330874|ref|ZP_06873349.1| hypothetical protein BSU6633_07236 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674392|ref|YP_003866064.1| hypothetical protein BSUW23_08545 [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151879|gb|EFG92753.1| hypothetical protein BSU6633_07236 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412636|gb|ADM37755.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 156

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + QP+++ +    V I  ++E ++  L++F++ DDG + + +C ++S+A+S  LD  
Sbjct: 9   VQEMAQPIVDSLQLELVDIEFVKEGQSWFLRVFIDSDDG-VDIEECAKVSEALSEKLDEA 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I  +Y LEVSSPG +RP+ +K+DF +  G  V
Sbjct: 68  DPISQNYFLEVSSPGAERPLKKKADFEKSLGKNV 101


>gi|259586210|sp|B8CKH1|RIMP_SHEPW RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L+++++ + G + + DC E S+ +S ++DVE+ I   Y LEVSSPG+DRP+     
Sbjct: 33  KHSILRLYIDNEKG-IFIEDCAETSRQVSAVMDVEDPISTEYTLEVSSPGVDRPLFTAEQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           +  + G  V  ++ +     + L G ++G       L        D NEL IA+  D++ 
Sbjct: 92  YQLYIGETVKVQVTMPVAGSRNLKGTVIGIEGQMLTL------SVDGNELIIAL--DNIR 143

Query: 169 SARLI 173
              LI
Sbjct: 144 KGNLI 148


>gi|16078722|ref|NP_389541.1| hypothetical protein BSU16590 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221309537|ref|ZP_03591384.1| hypothetical protein Bsubs1_09141 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313861|ref|ZP_03595666.1| hypothetical protein BsubsN3_09072 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318784|ref|ZP_03600078.1| hypothetical protein BsubsJ_09001 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323056|ref|ZP_03604350.1| hypothetical protein BsubsS_09112 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321315426|ref|YP_004207713.1| ribosome maturation protein RimP [Bacillus subtilis BSn5]
 gi|418459|sp|P32726|RIMP_BACSU RecName: Full=Ribosome maturation factor rimP; AltName: Full=P15A
 gi|49315|emb|CAA79230.1| ORF1 [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634031|emb|CAB13532.1| putative RNA-binding protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|291484214|dbj|BAI85289.1| hypothetical protein BSNT_02698 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320021700|gb|ADV96686.1| ribosome maturation protein RimP [Bacillus subtilis BSn5]
          Length = 156

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + QP+++ +    V I  ++E ++  L++F++ DDG + + +C ++S+A+S  LD  
Sbjct: 9   VQEMAQPIVDSLQLELVDIEFVKEGQSWFLRVFIDSDDG-VDIEECAKVSEALSEKLDEA 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I  +Y LEVSSPG +RP+ +K+DF +  G  V
Sbjct: 68  DPISQNYFLEVSSPGAERPLKKKADFEKSLGKNV 101


>gi|331084711|ref|ZP_08333799.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410805|gb|EGG90227.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 155

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 2/136 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I P++E   F  V +  ++E  N  L+ ++++  G + + DCE +S+A S ILD E+ I
Sbjct: 14  LILPIVEGNGFELVDVEYVKEGSNWYLRAYIDKP-GGIAVDDCEVVSRAFSEILDREDYI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           E  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++  G +    +    +E
Sbjct: 73  EDTYIFEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRAIDRQKEFTGILKSYDKDTVTIE 132

Query: 147 KEKRGEKDMNELQIAI 162
            E    K     +IA+
Sbjct: 133 YEDGEPKTFERSEIAL 148


>gi|161870485|ref|YP_001599657.1| hypothetical protein NMCC_1541 [Neisseria meningitidis 053442]
 gi|259585798|sp|A9M1D3|RIMP_NEIM0 RecName: Full=Ribosome maturation factor rimP
 gi|161596038|gb|ABX73698.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 143

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEG 110


>gi|21243418|ref|NP_643000.1| hypothetical protein XAC2689 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|34223124|sp|Q8PJ53|RIMP_XANAC RecName: Full=Ribosome maturation factor rimP
 gi|21108969|gb|AAM37536.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 196

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 12/158 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +        +     G+       + I +D++  AR++
Sbjct: 125 LRIDAEAAAVVFAVDGK------DVQIGYDNIDKARIV 156


>gi|282857787|ref|ZP_06266996.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
 gi|282584457|gb|EFB89816.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
          Length = 165

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILD-V 82
           IS  ++ ++E + +  V    ++E  + +L+++++RD G + L DCE  ++ I  +LD  
Sbjct: 6   ISGQLKTLVESLGYEFVGAETVKEAGSQILRVYIDRD-GGVGLDDCERSAKEIGALLDTA 64

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
            +  E HY LEVSSPG++RP+ +  D+ R+ G  V
Sbjct: 65  ADAFEDHYLLEVSSPGLERPLFKAEDYARFAGRPV 99


>gi|325661696|ref|ZP_08150319.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471949|gb|EGC75164.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 174

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 2/136 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I P++E   F  V +  ++E  N  L+ ++++  G + + DCE +S+A S ILD E+ I
Sbjct: 33  LILPIVEGNGFELVDVEYVKEGSNWYLRAYIDKP-GGIAVDDCEVVSRAFSEILDREDYI 91

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           E  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++  G +    +    +E
Sbjct: 92  EDTYIFEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRAIDRQKEFTGILKSYDKDTVTIE 151

Query: 147 KEKRGEKDMNELQIAI 162
            E    K     +IA+
Sbjct: 152 YEDGEPKTFERSEIAL 167


>gi|294142062|ref|YP_003558040.1| hypothetical protein SVI_3291 [Shewanella violacea DSS12]
 gi|293328531|dbj|BAJ03262.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 151

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 1/89 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+  L+++++ D G + + DC E S+ IS +LDVE+ I   Y LEVSSPG+DRP+     
Sbjct: 33  KHSTLRVYIDNDKG-IFIEDCAETSRQISAVLDVEDPISTEYTLEVSSPGVDRPLFSSEQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  +    V  ++ +     + L G ++G
Sbjct: 92  YASYIDETVKIQLTMPVAGSRNLKGTVIG 120


>gi|259586211|sp|A8FYS2|RIMP_SHESH RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L+++++ + G + + DC E S+ +S +LDVE+ I   Y LEVSSPG+DRP+ +   
Sbjct: 33  KHSILRVYIDNEKG-IFIEDCAETSRQVSAVLDVEDPISTEYTLEVSSPGVDRPLFKAEQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  +    V  ++ +     + L G I G
Sbjct: 92  YAAYIDETVKIQLTMPVAGSRNLKGTITG 120


>gi|289805472|ref|ZP_06536101.1| hypothetical protein Salmonellaentericaenterica_13917 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 86

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNG 114
             Y LEVSSPG+DRPM     +  + G
Sbjct: 60  VAYNLEVSSPGLDRPMFTADHYASFRG 86


>gi|224419195|ref|ZP_03657201.1| hypothetical protein HcanM9_07971 [Helicobacter canadensis MIT
           98-5491]
 gi|253828125|ref|ZP_04871010.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313142699|ref|ZP_07804892.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253511531|gb|EES90190.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131730|gb|EFR49347.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 143

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 6/129 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M ++ D+ + IQ ++E    +   I  L+E  N +L+IFV +   +++L DC+E+S A+S
Sbjct: 1   MLISQDLQTKIQKLVESFDCKLYDIVTLKENDNQILRIFVTKK-SSVSLDDCQEISLALS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDVE      Y LEVSSPGI+R +  K  +    G ++     + +  K++  GK++ 
Sbjct: 60  PLLDVEIPESKSYFLEVSSPGIERTLKTKEHYCDAIGELLK----VKTFAKEEFKGKLLA 115

Query: 138 TSETGFFLE 146
            +     LE
Sbjct: 116 VNSDNLELE 124


>gi|83748668|ref|ZP_00945685.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551]
 gi|207743365|ref|YP_002259757.1| hypothetical protein RSIPO_01539 [Ralstonia solanacearum IPO1609]
 gi|83724630|gb|EAP71791.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551]
 gi|206594762|emb|CAQ61689.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 162

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 7/120 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN
Sbjct: 3   LTDLIEKTLTAMGYELVEVE--RAPAGLLRVYIDQAETGIVIEDCEKVSHQLTRVFEVEN 60

Query: 85  IIEGHY-RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETG 142
           +   HY RLEVSSPG+DRP+   +DF R+ G  V   + L    ++   G +   T E G
Sbjct: 61  V---HYERLEVSSPGLDRPLRTLTDFTRFAGQEVKVTLRLPVDGQKNFTGIVQAPTGEPG 117


>gi|313888257|ref|ZP_07821928.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845660|gb|EFR33050.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 153

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 12/128 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +I  + + V EE+ +  V I      K+ LL IF+ + +G + L DC ++S+++   
Sbjct: 6   LKKEIYPLAEEVAEELGYEIVDIEFQNGSKHDLLSIFIYKKEG-IDLNDCTDMSRSLEKK 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I++  Y LE+SSPG+DRP+  K D+ R  G+ V            KL   I G  
Sbjct: 65  LDNLEILKNPYYLEISSPGLDRPLKTKDDYRRNIGNEVDV----------KLYAPIDGKK 114

Query: 140 ETGFFLEK 147
           E  F L+K
Sbjct: 115 EFSFVLDK 122


>gi|20807844|ref|NP_623015.1| hypothetical protein TTE1397 [Thermoanaerobacter tengcongensis MB4]
 gi|34222922|sp|Q8RA33|RIMP_THETN RecName: Full=Ribosome maturation factor rimP
 gi|20516406|gb|AAM24619.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 151

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 66/112 (58%), Gaps = 2/112 (1%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
             ++ P++EE +F  V +   +E K+  L+++++++ G +TL DC+ +S+ +S  LD  +
Sbjct: 9   KELVMPILEENNFELVDVEYKKEGKHWYLRVYIDKE-GGITLDDCQLVSEYLSDRLDEVD 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            I+  Y LEVSSPG+DRP+    DF R  G  V   +      ++K  G+++
Sbjct: 68  PIDHSYILEVSSPGLDRPLKTPRDFKRNLGKEVEVSLYQPIDKRKKFTGELL 119


>gi|253580824|ref|ZP_04858087.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847894|gb|EES75861.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 154

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 2/91 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P++E   F  V +  ++E  N  L+ ++++  G +T+ DCE +S+A S  LD  + I
Sbjct: 14  LLAPIVELNGFELVDVEYVKEAGNWYLRGYIDKP-GGITVNDCETVSRAFSDKLDENDFI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           E  Y +E+SSPG+DRP+ +  DF R  G +V
Sbjct: 73  EDSYIMEISSPGLDRPLKKDKDFERNMGKLV 103


>gi|167035705|ref|YP_001670936.1| hypothetical protein PputGB1_4714 [Pseudomonas putida GB-1]
 gi|189040210|sp|B0KHY0|RIMP_PSEPG RecName: Full=Ribosome maturation factor rimP
 gi|166862193|gb|ABZ00601.1| protein of unknown function DUF150 [Pseudomonas putida GB-1]
          Length = 152

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 60/98 (61%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + ++   I  + + K+ +L+I+++++ G + + DCE +S+  S ILDVE
Sbjct: 8   LQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE-GGILVEDCEAVSRQASAILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG+DRP+     F    G  V  ++
Sbjct: 67  DPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKL 104


>gi|17231320|ref|NP_487868.1| hypothetical protein alr3828 [Nostoc sp. PCC 7120]
 gi|34222944|sp|Q8YQJ5|RIMP_ANASP RecName: Full=Ribosome maturation factor rimP
 gi|17132962|dbj|BAB75527.1| alr3828 [Nostoc sp. PCC 7120]
          Length = 153

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I+ +  PV E++    V I     ++  +L+I +     +  L DCE +S+A+   
Sbjct: 5   LVPPITDLAIPVAEQLGLEVVGIVFHTNQRPPVLRIDIRNPQQDTGLDDCERMSRALEAA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R +V   +F+ + G  V         ++Q+ IG+++   
Sbjct: 65  LDATEIIPDAYVLEVSSPGISRQLVTDREFISFKGFPVIVSTSPPHEEQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKR 150
           ET  ++ ++ R
Sbjct: 125 ETKVYINQKGR 135


>gi|119504357|ref|ZP_01626437.1| hypothetical protein MGP2080_00755 [marine gamma proteobacterium
           HTCC2080]
 gi|119459865|gb|EAW40960.1| hypothetical protein MGP2080_00755 [marine gamma proteobacterium
           HTCC2080]
          Length = 166

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S ++ P +E + F    + LL   +   L++F+E D G +++ DC ++S+ +  +LDVE
Sbjct: 8   LSELLTPTVESLGFELWGLELLSPNRRPTLRLFIEGDTG-VSVDDCAKVSRHVGGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + I G Y LEVSSPGIDR + +   +  + G  +  ++      +++  G +MG
Sbjct: 67  DPISGDYTLEVSSPGIDRLLFKVDQYGLYIGEPIEVKLRFPFEGRRRFRGWLMG 120


>gi|325276163|ref|ZP_08141968.1| ribosome maturation protein RimP [Pseudomonas sp. TJI-51]
 gi|324098700|gb|EGB96741.1| ribosome maturation protein RimP [Pseudomonas sp. TJI-51]
          Length = 152

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 60/98 (61%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + ++   I  + + K+ +L+I+++++ G + + DCE +S+  S ILDVE
Sbjct: 8   LQALLAPVVEGLGYQCWGIEFVSQGKHSVLRIYIDKE-GGILVDDCEAVSRQASAILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG+DRP+     F    G  V  ++
Sbjct: 67  DPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKL 104


>gi|302537259|ref|ZP_07289601.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302446154|gb|EFL17970.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 170

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 7/127 (5%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           K  +L+I V+ D+G + L +C ELS+ IS  LD  +++ E  Y LEVSSPG DRP+  + 
Sbjct: 34  KRRMLRIIVDSDEG-VDLDECAELSREISDRLDESDVMGEDEYNLEVSSPGADRPLSERR 92

Query: 108 DFLRWNGHVVACEIVLSSGDK--QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
            ++R  G +V  ++  + G+K   +LI +I+G  + G  LE    G K        I+F 
Sbjct: 93  HYVRATGRLVKFQLS-AEGEKGAGELIARILGVDDEGMDLEVP--GVKGRKATARRIAFT 149

Query: 166 SLLSARL 172
            +  AR+
Sbjct: 150 DVAKARV 156


>gi|316984983|gb|EFV63937.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|319410894|emb|CBY91288.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
 gi|325130690|gb|EGC53430.1| hypothetical protein NMBOX9930304_0543 [Neisseria meningitidis
           OX99.30304]
 gi|325140714|gb|EGC63228.1| hypothetical protein NMBCU385_0550 [Neisseria meningitidis CU385]
 gi|325144893|gb|EGC67180.1| hypothetical protein NMBM01240013_0663 [Neisseria meningitidis
           M01-240013]
 gi|325199765|gb|ADY95220.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325204602|gb|ADZ00056.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
          Length = 143

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKESG-ITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEG 110


>gi|261364308|ref|ZP_05977191.1| hypothetical protein NEIMUCOT_04406 [Neisseria mucosa ATCC 25996]
 gi|288567561|gb|EFC89121.1| hypothetical protein NEIMUCOT_04406 [Neisseria mucosa ATCC 25996]
          Length = 143

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPVDGQKNFIGRIEG 110


>gi|194366590|ref|YP_002029200.1| hypothetical protein Smal_2817 [Stenotrophomonas maltophilia
           R551-3]
 gi|226701526|sp|B4SQS2|RIMP_STRM5 RecName: Full=Ribosome maturation factor rimP
 gi|194349394|gb|ACF52517.1| protein of unknown function DUF150 [Stenotrophomonas maltophilia
           R551-3]
          Length = 196

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 20/162 (12%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A DI++++ P +  +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +DVE+ I G+Y LEVSSPG+DRP+     F R  G      + L   ++++L G+I
Sbjct: 65  VSAQMDVEDPISGNYTLEVSSPGVDRPLFNLEQFGRHLGESAKVTLKLPQDNRRRLQGRI 124

Query: 136 MGTSETG----FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               E      F ++K           ++ +S D++  AR++
Sbjct: 125 EAIDEAAGAITFIVDK----------AEVVVSADNIDKARIM 156


>gi|225848028|ref|YP_002728191.1| hypothetical protein SULAZ_0194 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|259645121|sp|C1DXS9|RIMP_SULAA RecName: Full=Ribosome maturation factor rimP
 gi|225644280|gb|ACN99330.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 147

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 1/119 (0%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  ++ P++E+   + V I  +  K  +L+I++   +G  ++ DCE +SQ I  
Sbjct: 1   MKLEEKVKELLSPILEDRGLKLVDIEYITGKRPVLRIYIYNPEGT-SIDDCEYVSQRIGS 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           ILDVE++I+  Y LEVSSPG+DR      ++  + G  V  +      DK+   G + G
Sbjct: 60  ILDVEDLIKTSYTLEVSSPGLDRKFKNIEEYNIFKGKDVVVKTKEPIEDKKIFKGILEG 118


>gi|157376523|ref|YP_001475123.1| hypothetical protein Ssed_3391 [Shewanella sediminis HAW-EB3]
 gi|157318897|gb|ABV37995.1| protein of unknown function DUF150 [Shewanella sediminis HAW-EB3]
          Length = 172

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L+++++ + G + + DC E S+ +S +LDVE+ I   Y LEVSSPG+DRP+ +   
Sbjct: 54  KHSILRVYIDNEKG-IFIEDCAETSRQVSAVLDVEDPISTEYTLEVSSPGVDRPLFKAEQ 112

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  +    V  ++ +     + L G I G
Sbjct: 113 YAAYIDETVKIQLTMPVAGSRNLKGTITG 141


>gi|255066626|ref|ZP_05318481.1| hypothetical protein NEISICOT_01636 [Neisseria sicca ATCC 29256]
 gi|255049210|gb|EET44674.1| hypothetical protein NEISICOT_01636 [Neisseria sicca ATCC 29256]
          Length = 189

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 48  DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSRVFMVE 104

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I G
Sbjct: 105 DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPVDGQKNFIGRIEG 156


>gi|254805396|ref|YP_003083617.1| hypothetical protein NMO_1459 [Neisseria meningitidis alpha14]
 gi|254668938|emb|CBA07181.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
 gi|254669625|emb|CBA03670.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
 gi|325201700|gb|ADY97154.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
 gi|325208564|gb|ADZ04016.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
          Length = 143

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKESG-ITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEG 110


>gi|325921397|ref|ZP_08183254.1| hypothetical protein XGA_2246 [Xanthomonas gardneri ATCC 19865]
 gi|325548155|gb|EGD19152.1| hypothetical protein XGA_2246 [Xanthomonas gardneri ATCC 19865]
          Length = 196

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 6/121 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  GKI
Sbjct: 65  VSAQLDVEDPITGNYTLEVSSPGVDRPLFTLEQFARHVGESAKIVLKLAQDGRRRFQGKI 124

Query: 136 M 136
           +
Sbjct: 125 L 125


>gi|319787429|ref|YP_004146904.1| hypothetical protein Psesu_1831 [Pseudoxanthomonas suwonensis 11-1]
 gi|317465941|gb|ADV27673.1| protein of unknown function DUF150 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 192

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 17/165 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV--------ERDDGNMTLRDCEELSQ 74
           +I  ++ P +E +    + +  L       L++++        E     +T+ DCE +S+
Sbjct: 7   EIVQLLAPTVESLGLELLGVEYLPAPGGATLRLYIDVPAAGEGEEPARTVTIEDCEAVSR 66

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LDV + I G+Y LEVSSPG+DRP+     F+R+ G      + L    +++L G 
Sbjct: 67  EVSAQLDVADPISGNYTLEVSSPGMDRPLFAAEHFIRFLGQQAKVGLKLPQDGRRRLQGT 126

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           I+  ++              ++  +  ++ D++  ARL+   E L
Sbjct: 127 ILRVADGQVAF--------GLDNAEFVVALDNIDKARLVPDWEAL 163


>gi|167756907|ref|ZP_02429034.1| hypothetical protein CLORAM_02456 [Clostridium ramosum DSM 1402]
 gi|167703082|gb|EDS17661.1| hypothetical protein CLORAM_02456 [Clostridium ramosum DSM 1402]
          Length = 155

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I ++I+P++E        I  L+E     L+IFVE+++G++ +  C  +S+AIS
Sbjct: 1   MELLDTIKTLIKPILENNDVYLDDIEYLQENGEWYLRIFVEKNEGSLDMDTCVAVSEAIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPM 103
             +D E+ I+G Y LEVSSPG+++P+
Sbjct: 61  LKMDEEDPIKGEYYLEVSSPGVEKPL 86


>gi|104780026|ref|YP_606524.1| hypothetical protein PSEEN0793 [Pseudomonas entomophila L48]
 gi|259586182|sp|Q1IF45|RIMP_PSEE4 RecName: Full=Ribosome maturation factor rimP
 gi|95109013|emb|CAK13709.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 169

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 60/98 (61%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + ++   I  + + K+ +L+I+++++ G + + DCE +S+  S ILDVE
Sbjct: 25  LQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE-GGILVDDCEAVSRQASAILDVE 83

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG+DRP+     F    G  V  ++
Sbjct: 84  DPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKL 121


>gi|315658445|ref|ZP_07911317.1| protein of hypothetical function DUF150 [Staphylococcus lugdunensis
           M23590]
 gi|315496774|gb|EFU85097.1| protein of hypothetical function DUF150 [Staphylococcus lugdunensis
           M23590]
          Length = 155

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 86/152 (56%), Gaps = 6/152 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++ ++IQPV+E +++  V++  ++E K+  L++ ++++ G + L DC   S+ IS +
Sbjct: 4   ITEEVETLIQPVLEALNYELVEVEFVKEGKDHFLRVSIDKE-GGVDLNDCTLASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I+  Y L+V+SPG +RP+ ++ D+ R     +   +     + ++ +G ++  +
Sbjct: 63  MDEHDPIKEMYYLDVASPGAERPIKKEQDYQRAIQQPIFVSLYAPIENNKEWLGILVEVT 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                +E +++ +K     QI+I  + +  AR
Sbjct: 123 AETITMEVKEKAKKK----QISIPRNKIAKAR 150


>gi|312885215|ref|ZP_07744894.1| hypothetical protein VIBC2010_19055 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367155|gb|EFP94728.1| hypothetical protein VIBC2010_19055 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 151

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++  +G + + DC E+S+ +S ++DVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIFIDHANG-INVEDCAEVSRQVSAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++  +++K  G I
Sbjct: 96  IGHEVSLVLKMAMNNRRKWKGII 118


>gi|229013000|ref|ZP_04170165.1| hypothetical protein bmyco0001_34380 [Bacillus mycoides DSM 2048]
 gi|228748254|gb|EEL98114.1| hypothetical protein bmyco0001_34380 [Bacillus mycoides DSM 2048]
          Length = 173

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 71/124 (57%), Gaps = 2/124 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E ++  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VEIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMFE 124

Query: 133 GKIM 136
           GK++
Sbjct: 125 GKLL 128


>gi|297584077|ref|YP_003699857.1| hypothetical protein Bsel_1784 [Bacillus selenitireducens MLS10]
 gi|297142534|gb|ADH99291.1| protein of unknown function DUF150 [Bacillus selenitireducens
           MLS10]
          Length = 156

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  + +P++ E     V I  ++E KN  L++F++  +G + L  C  +S+ +S 
Sbjct: 4   AITDKVEKLAEPIVSEAGLELVDIEFVKEGKNWFLRVFIDGPEG-VDLDHCSTVSERLSE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + IE  Y LEVSSPG +RP+ +  D  +  G  V         D++   GK++G 
Sbjct: 63  KLDQSDPIEQAYYLEVSSPGAERPLKKAEDITKAIGKNVHVATYAPIEDEKVFEGKLIGF 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              G  L  E++ +  ++  Q+ I +D +  ARL V
Sbjct: 123 D--GETLTVEQKIKTRVS--QVEIPYDKVSKARLAV 154


>gi|94310971|ref|YP_584181.1| hypothetical protein Rmet_2033 [Cupriavidus metallidurans CH34]
 gi|166980260|sp|Q1LLR4|RIMP_RALME RecName: Full=Ribosome maturation factor rimP
 gi|93354823|gb|ABF08912.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 162

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 55/82 (67%), Gaps = 2/82 (2%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++++++ +  + + DCE++S+ ++ +L VEN+   + RLEVSSPG+DRP+ + +DF+R
Sbjct: 28  LLRVYIDQPETGIVIEDCEKVSRQLTHVLTVENV--DYERLEVSSPGLDRPLKKLADFVR 85

Query: 112 WNGHVVACEIVLSSGDKQKLIG 133
           + G  V   + L    ++  +G
Sbjct: 86  FAGAEVRVTLRLPVNGQKNFVG 107


>gi|261379109|ref|ZP_05983682.1| hypothetical protein NEICINOT_05033 [Neisseria cinerea ATCC 14685]
 gi|269144429|gb|EEZ70847.1| hypothetical protein NEICINOT_05033 [Neisseria cinerea ATCC 14685]
          Length = 143

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPIDGQKNFIGKIEG 110


>gi|237734615|ref|ZP_04565096.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229382435|gb|EEO32526.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 167

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I ++I+P++E        I  L+E     L+IFVE+++G++ +  C  +S+AIS
Sbjct: 13  MELLDTIKTLIKPILENNDVYLDDIEYLQENGEWYLRIFVEKNEGSLDMDTCVAVSEAIS 72

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPM 103
             +D E+ I+G Y LEVSSPG+++P+
Sbjct: 73  LKMDEEDPIKGEYYLEVSSPGVEKPL 98


>gi|117919477|ref|YP_868669.1| hypothetical protein Shewana3_1028 [Shewanella sp. ANA-3]
 gi|166919124|sp|A0KTZ4|RIMP_SHESA RecName: Full=Ribosome maturation factor rimP
 gi|117611809|gb|ABK47263.1| protein of unknown function DUF150 [Shewanella sp. ANA-3]
          Length = 151

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 65/112 (58%), Gaps = 2/112 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++  +E + F+   I  ++  K+ +L++F++ ++G + + DC  +S+ +S +LDVE
Sbjct: 8   LADMLKVPVEALGFQLWGIEYVQAGKHSILRVFIDGENG-INIEDCANVSRQVSAVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I
Sbjct: 67  DPISTEYTLEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGSRNLKGAI 118


>gi|24372785|ref|NP_716827.1| hypothetical protein SO_1202 [Shewanella oneidensis MR-1]
 gi|34222878|sp|Q8EHL7|RIMP_SHEON RecName: Full=Ribosome maturation factor rimP
 gi|24346870|gb|AAN54272.1|AE015564_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 151

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 2/104 (1%)

Query: 33  IEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           +E + F+   I  ++  K+ +L++F++ ++G + + DC  +S+ +S +LDVE+ I   Y 
Sbjct: 16  VEALGFQLWGIEYVQAGKHSILRVFIDGENG-INIEDCANVSRQVSAVLDVEDPISTEYT 74

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LEVSSPG+DRP+     +  + G  V  ++ +     + L G I
Sbjct: 75  LEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGSRNLKGAI 118


>gi|113969368|ref|YP_733161.1| hypothetical protein Shewmr4_1024 [Shewanella sp. MR-4]
 gi|114046595|ref|YP_737145.1| hypothetical protein Shewmr7_1089 [Shewanella sp. MR-7]
 gi|123029878|sp|Q0HLG3|RIMP_SHESM RecName: Full=Ribosome maturation factor rimP
 gi|123030836|sp|Q0HXR7|RIMP_SHESR RecName: Full=Ribosome maturation factor rimP
 gi|113884052|gb|ABI38104.1| protein of unknown function DUF150 [Shewanella sp. MR-4]
 gi|113888037|gb|ABI42088.1| protein of unknown function DUF150 [Shewanella sp. MR-7]
          Length = 151

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 2/104 (1%)

Query: 33  IEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           +E + F+   I  ++  K+ +L++F++ ++G + + DC  +S+ +S +LDVE+ I   Y 
Sbjct: 16  VEALGFQLWGIEYVQAGKHSILRVFIDGENG-INIEDCANVSRQVSAVLDVEDPISTEYT 74

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LEVSSPG+DRP+     +  + G  V  ++ +     + L G I
Sbjct: 75  LEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGSRNLKGAI 118


>gi|331082959|ref|ZP_08332079.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330399954|gb|EGG79612.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 154

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 58/88 (65%), Gaps = 2/88 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P++ E +F  V +  ++E  N  L+ ++++ +G +T+ DCE +S+A S  LD E+ I
Sbjct: 14  LLEPIVAEHNFELVDVEYVKEGSNFYLRAYIDKPEG-ITVDDCEIVSRAFSQKLDEEDFI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           +  Y +EVSSPG+ RP+ ++ D+ R  G
Sbjct: 73  DEAYIMEVSSPGLGRPLKKEKDYKRSMG 100


>gi|26991397|ref|NP_746822.1| hypothetical protein PP_4714 [Pseudomonas putida KT2440]
 gi|148549781|ref|YP_001269883.1| hypothetical protein Pput_4579 [Pseudomonas putida F1]
 gi|259586189|sp|A5W989|RIMP_PSEP1 RecName: Full=Ribosome maturation factor rimP
 gi|24986466|gb|AAN70286.1|AE016669_4 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|148513839|gb|ABQ80699.1| protein of unknown function DUF150 [Pseudomonas putida F1]
 gi|313500622|gb|ADR61988.1| Ribosome maturation factor rimP [Pseudomonas putida BIRD-1]
          Length = 169

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 60/98 (61%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + ++   I  + + K+ +L+I+++++ G + + DCE +S+  S ILDVE
Sbjct: 25  LQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE-GGILVDDCEAVSRQASAILDVE 83

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG+DRP+     F    G  V  ++
Sbjct: 84  DPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKL 121


>gi|227499046|ref|ZP_03929183.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904495|gb|EEH90413.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 153

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S +  P+ E      V +  + E++  L+++++++ G + + DC  +S  +  +LD ++
Sbjct: 10  VSELALPICEACGVELVDVEYVRERDWYLRVYIDKE-GGIDIDDCTAVSGDLEKVLDEKD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           +I+  Y LEVSSPGIDRP+ + SD++   G
Sbjct: 69  VIKEQYYLEVSSPGIDRPLKKDSDYVDHYG 98


>gi|297191725|ref|ZP_06909123.1| UPF0090 protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721419|gb|EDY65327.1| UPF0090 protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 165

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 11/151 (7%)

Query: 25  ISSVIQPVIE--EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +  +++P++   E+    +++S    + +L +I V+ D+G + L  C ELS+AIS  LD 
Sbjct: 9   LRGLLEPLVSAAELDLEEIEVSRAGRRRML-RITVDSDEG-VELDACAELSRAISEKLDE 66

Query: 83  ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + + EG Y LEVSSPG DRP+     F+R  G +V  ++    GD   L+ +++   + 
Sbjct: 67  TDAMGEGEYVLEVSSPGADRPLSEHRHFVRATGRLVKLQLK-EGGD---LVARLLTVDDE 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G  LE    G K        ++FD ++ AR+
Sbjct: 123 GLDLEVP--GVKGRKPTARRVAFDDIVKARV 151


>gi|295706247|ref|YP_003599322.1| hypothetical protein BMD_4142 [Bacillus megaterium DSM 319]
 gi|294803906|gb|ADF40972.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 156

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 3/94 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++EEM+   V+I  ++E K+  L++F++ D G + + DC  +S+ +S  +D  
Sbjct: 9   VEEMVSPILEEMNLELVEIEYVKEGKDWFLRVFIDSDTG-VDIEDCGAVSEKLSEKMDAV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG-HV 116
           + I  +Y LEVSSPG +RP+ +  DF R  G HV
Sbjct: 68  DPIPHNYFLEVSSPGAERPLKKDKDFERAIGKHV 101


>gi|260771816|ref|ZP_05880734.1| UPF0090 domain-containing protein [Vibrio metschnikovii CIP 69.14]
 gi|260613108|gb|EEX38309.1| UPF0090 domain-containing protein [Vibrio metschnikovii CIP 69.14]
          Length = 151

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+I+++ ++G +T+  C E+S  +S +LDVE+ I   Y LEVSSPG++RP+ + + + ++
Sbjct: 37  LRIYIDHENG-ITVDACAEVSHQVSAVLDVEDPITVAYNLEVSSPGLERPLFKAAHYEQF 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            GH V+  + ++  +++K  G I
Sbjct: 96  IGHEVSIVLKMAVANRRKWKGII 118


>gi|160943265|ref|ZP_02090501.1| hypothetical protein FAEPRAM212_00751 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445504|gb|EDP22507.1| hypothetical protein FAEPRAM212_00751 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105167|emb|CBL02711.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
           prausnitzii SL3/3]
          Length = 161

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++++P +E M  R   +   +E  +  L+I ++RD G M    C E+S A+ PILD  
Sbjct: 13  VEALVRPTVEGMGLRLWDVVFEKEGPDWYLRILIDRD-GTMDTDTCAEVSHALDPILDEA 71

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK-QKLIGKIMGTSETG 142
           + I+  Y LEV SPG+ R + R   +    G  V  +++  + D  ++L G + G   + 
Sbjct: 72  DPIDQSYYLEVGSPGLGRKLTRPEHYEALKGQKVRAKLIRPNADGVRELSGILTGREGST 131

Query: 143 FFLEKE 148
             LE E
Sbjct: 132 VTLETE 137


>gi|297569837|ref|YP_003691181.1| protein of unknown function DUF150 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925752|gb|ADH86562.1| protein of unknown function DUF150 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 155

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 85/165 (51%), Gaps = 22/165 (13%)

Query: 17  GDMGLAGDISSVIQPVI-------EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDC 69
           G+  L   +  +++PV+        E+ FR       E    +L++ ++ DDG + L DC
Sbjct: 4   GESALIQRLHELLEPVVLDHGLELAELQFRR------EAPGWVLRLIIDADDG-VGLDDC 56

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
             +S+ +S +L+VE+ IE  + LEVSSPG+DRP+ R+ D++R  G +           + 
Sbjct: 57  TRVSREVSHLLEVEDPIEQAFTLEVSSPGLDRPLRRERDYVRCRGKMAKIVCTRQIEGQN 116

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +IG++   ++    +      E D   +++ ++  ++  ARL+V
Sbjct: 117 VVIGRLGEVADGAVTV------ETDAGPVKVPLA--AVRRARLVV 153


>gi|78048395|ref|YP_364570.1| hypothetical protein XCV2839 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325924689|ref|ZP_08186127.1| hypothetical protein XPE_0035 [Xanthomonas perforans 91-118]
 gi|91208411|sp|Q3BRP3|RIMP_XANC5 RecName: Full=Ribosome maturation factor rimP
 gi|78036825|emb|CAJ24518.1| YhbC family protein [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|325544895|gb|EGD16240.1| hypothetical protein XPE_0035 [Xanthomonas perforans 91-118]
          Length = 196

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 18/161 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 M---GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +     +E   F    K          + I +D++  AR++
Sbjct: 125 LRIDAEAEAVVFAVDGK---------DVQIGYDNIDKARIV 156


>gi|89095216|ref|ZP_01168139.1| YhbC-like protein [Oceanospirillum sp. MED92]
 gi|89080513|gb|EAR59762.1| YhbC-like protein [Oceanospirillum sp. MED92]
          Length = 151

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 65/112 (58%), Gaps = 2/112 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I+P +  + F    I  L + K+  L+++++ ++G + + DC ++S  +S I+DVE+ I
Sbjct: 11  LIEPSVSALGFELWGIEFLSQGKHSTLRVYIDSENG-INVDDCAKVSHQVSGIMDVEDPI 69

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            G+Y LEVSSPG++RP+     F  + G  +   + ++   ++K  G + G 
Sbjct: 70  AGNYTLEVSSPGMERPLFTLEQFAAYAGSEIQIRLRVAFEGRRKFKGVLNGV 121


>gi|313896717|ref|ZP_07830265.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312974634|gb|EFR40101.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 149

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 31  PVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           PV  E+    V +  + E++  L+++++++ G + + DC  LS+ +  ILD E+ I   Y
Sbjct: 18  PVQPELEL--VDVEYVRERDWYLRVYIDKE-GGIDIEDCRTLSERLEEILDREDFIADAY 74

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            LEVSSPG+DR + +  DF R +G  V   +      K+ L G++ G       L+ + R
Sbjct: 75  ILEVSSPGLDRVLRKARDFEREHGKRVDVALYAPLDGKKNLTGELTGYDGNVLILDDDVR 134


>gi|310658998|ref|YP_003936719.1| hypothetical protein CLOST_1694 [Clostridium sticklandii DSM 519]
 gi|308825776|emb|CBH21814.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 152

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 5/124 (4%)

Query: 21  LAGDISSVIQPVIEEM---SFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAI 76
           +A  +  +I+ ++ +M    F  V +  ++E +L  L+I++++  G M+L DC+  S  I
Sbjct: 1   MASKLELLIEGIVSDMITDPFELVDVEYVKEGSLKYLRIYIDKQ-GKMSLDDCQHFSHLI 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IE +Y LE+SSPG+DR + ++ DF+R  G  V  ++  +    ++  G ++
Sbjct: 60  SEKLDELDPIEENYMLEISSPGLDRHLKKEKDFIREKGKEVELKLFKAIDGVKEFEGTLV 119

Query: 137 GTSE 140
           G SE
Sbjct: 120 GLSE 123


>gi|312869023|ref|ZP_07729200.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
 gi|311095449|gb|EFQ53716.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
          Length = 157

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 14/156 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-V 82
           ++ ++ P+++E  F    I  ++E K+  L++++++D G +TL DC  +S  +S  LD V
Sbjct: 8   VTDLVTPILDEHHFYLYDIEFVKEGKSWYLRVYIDKD-GGITLDDCATVSDQLSEALDNV 66

Query: 83  E-NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE- 140
           E + I   Y LEVSSPG +RP+  ++D+ R   H +   +      K+   G +M  S+ 
Sbjct: 67  EPDPIPQAYFLEVSSPGAERPLKNEADYQRAVNHYIHVSLYQQIAGKKVYEGTLMELSDK 126

Query: 141 --TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             T  F++K +         Q+ I    +  ARL +
Sbjct: 127 EMTLDFMDKTRHR-------QVVIDRSKVAKARLAI 155


>gi|157962880|ref|YP_001502914.1| hypothetical protein Spea_3062 [Shewanella pealeana ATCC 700345]
 gi|189039813|sp|A8H742|RIMP_SHEPA RecName: Full=Ribosome maturation factor rimP
 gi|157847880|gb|ABV88379.1| protein of unknown function DUF150 [Shewanella pealeana ATCC
           700345]
          Length = 151

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L+++++ + G + + DC E S+ +S ++DVE+ I   Y LEVSSPG+DRP+     
Sbjct: 33  KHSILRLYIDNEKG-IFIEDCAEASRQVSAVMDVEDPISTEYTLEVSSPGVDRPLFTAEQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  + G  V  ++ +     + L G + G
Sbjct: 92  YQAYIGETVKVQLTMPVAGSRNLKGTVTG 120


>gi|294624664|ref|ZP_06703334.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666763|ref|ZP_06731997.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292601020|gb|EFF45087.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603424|gb|EFF46841.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 196

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 6/121 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 M 136
           +
Sbjct: 125 L 125


>gi|34222833|sp|Q88DV5|RIMP_PSEPK RecName: Full=Ribosome maturation factor rimP
          Length = 158

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 60/98 (61%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + ++   I  + + K+ +L+I+++++ G + + DCE +S+  S ILDVE
Sbjct: 14  LQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE-GGILVDDCEAVSRQASAILDVE 72

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG+DRP+     F    G  V  ++
Sbjct: 73  DPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKL 110


>gi|242309141|ref|ZP_04808296.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239524182|gb|EEQ64048.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 143

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 6/129 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M ++ ++ + IQ ++E    +   I+ L+E +N +L+I + +   +++L DC+E+S A+S
Sbjct: 1   MLISQELQAKIQKLVESFGCKIYDITTLKENENQILRISITKK-PSVSLDDCQEVSLALS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDVE      Y LEVSSPGI+RP+  K  F    G ++  + +     KQ   GK++ 
Sbjct: 60  PLLDVEIPNFEKYYLEVSSPGIERPLKTKEHFEDAIGELIKIKTI----SKQDFKGKLIA 115

Query: 138 TSETGFFLE 146
             +    LE
Sbjct: 116 IDDESLKLE 124


>gi|120597898|ref|YP_962472.1| hypothetical protein Sputw3181_1068 [Shewanella sp. W3-18-1]
 gi|146293930|ref|YP_001184354.1| hypothetical protein Sputcn32_2836 [Shewanella putrefaciens CN-32]
 gi|166977876|sp|A1RGX3|RIMP_SHESW RecName: Full=Ribosome maturation factor rimP
 gi|166988527|sp|A4Y9C2|RIMP_SHEPC RecName: Full=Ribosome maturation factor rimP
 gi|120557991|gb|ABM23918.1| protein of unknown function DUF150 [Shewanella sp. W3-18-1]
 gi|145565620|gb|ABP76555.1| protein of unknown function DUF150 [Shewanella putrefaciens CN-32]
 gi|319427307|gb|ADV55381.1| protein of unknown function DUF150 [Shewanella putrefaciens 200]
          Length = 151

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 2/104 (1%)

Query: 33  IEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           +E + F+   I  ++  K+ +L++F++ ++G + + DC   S+ +S +LDVE+ I   Y 
Sbjct: 16  VEALGFQLWGIEYVQAGKHSILRVFIDGENG-INIEDCANTSRQVSAVLDVEDPISTEYT 74

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LEVSSPG+DRP+     +  + G  V  ++ +     + L G I
Sbjct: 75  LEVSSPGVDRPLFTAEQYAAYVGEDVKVQLTMPVAGSRNLKGAI 118


>gi|34558305|ref|NP_908120.1| hypothetical protein WS2018 [Wolinella succinogenes DSM 1740]
 gi|51316745|sp|Q7MQU0|RIMP_WOLSU RecName: Full=Ribosome maturation factor rimP
 gi|34484024|emb|CAE11020.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 142

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 5/105 (4%)

Query: 45  LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMV 104
           L E +  +L++++ ++ G ++L DC  +S  ISP+LDVE+ + G Y LEVSSPGI+RP+ 
Sbjct: 27  LKENERSILRLYITKEVG-VSLDDCAMVSDLISPLLDVEDPLAGEYFLEVSSPGIERPLK 85

Query: 105 RKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           R + +    G +      +   DK ++ G+I    ET   L+ E+
Sbjct: 86  RPAHYQHALGELAR----IKFADKNEIEGEIEAADETSVKLKGEE 126


>gi|117618499|ref|YP_857796.1| 15 kDa protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117559906|gb|ABK36854.1| 15 kDa protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 175

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 56/87 (64%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+  L+++++ + G +++ +C E+S  +  I+DVE+ I   Y LEVSSPG+DRP+ + + 
Sbjct: 56  KHSTLRVYIDGEHG-VSVENCAEVSHQVGAIMDVEDPITEEYYLEVSSPGLDRPLFKVAQ 114

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           F ++ G   A  + +++ +++K  G I
Sbjct: 115 FEKYVGQEAAVTLRMATNNRRKFKGVI 141


>gi|319649524|ref|ZP_08003680.1| hypothetical protein HMPREF1013_00284 [Bacillus sp. 2_A_57_CT2]
 gi|317398686|gb|EFV79368.1| hypothetical protein HMPREF1013_00284 [Bacillus sp. 2_A_57_CT2]
          Length = 155

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P+++E++   V I  ++E K+  L++F++++ G + + +C  +S+ +S  LD E
Sbjct: 8   VEQLVTPIVDELNLELVDIEYVKEGKDWFLRVFIDKETG-VDIEECGTVSERLSEKLDAE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I  +Y LEVSSPG +RP+ + SDF++  G  V
Sbjct: 67  DPIPYNYFLEVSSPGAERPLKKDSDFVKAVGKNV 100


>gi|154686076|ref|YP_001421237.1| hypothetical protein RBAM_016430 [Bacillus amyloliquefaciens FZB42]
 gi|189038972|sp|A7Z4T0|RIMP_BACA2 RecName: Full=Ribosome maturation factor rimP
 gi|154351927|gb|ABS74006.1| YlxS [Bacillus amyloliquefaciens FZB42]
          Length = 156

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 82/152 (53%), Gaps = 6/152 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + QP+++++    V I  ++E +N  L++F++ ++G + + +C ++S+A+S  LD  
Sbjct: 9   VQEMAQPILDDLQLELVDIEFVKEGQNWFLRVFIDSENG-VDIEECAKVSEALSEKLDEA 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +        +   GK+        
Sbjct: 68  DPITQNYFLEVSSPGAERPLKKKADFEKSLGKNVYMKTYEPIDGLKVFEGKLAEFDGQTV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            +E   +  K     ++ I ++ + +ARL VT
Sbjct: 128 TIEMTVKTRKK----RVNIPYEKIANARLAVT 155


>gi|145638848|ref|ZP_01794456.1| hypothetical protein CGSHiII_01640 [Haemophilus influenzae PittII]
 gi|145271820|gb|EDK11729.1| hypothetical protein CGSHiII_01640 [Haemophilus influenzae PittII]
 gi|309750829|gb|ADO80813.1| 30S ribosomal maturation protein RimP [Haemophilus influenzae
           R2866]
          Length = 151

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + +++F++++ G +T+ +C ++S+ +S ILDVE+ I   Y LEVSSPG+DRP+     F 
Sbjct: 35  MTVRLFIDKE-GGVTVDNCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRPLFTLPQFE 93

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +A  + +   +++K  GK+
Sbjct: 94  RYIGQDIAVHLRIPVMERRKWQGKL 118


>gi|154249423|ref|YP_001410248.1| hypothetical protein Fnod_0736 [Fervidobacterium nodosum Rt17-B1]
 gi|259585774|sp|A7HL08|RIMP_FERNB RecName: Full=Ribosome maturation factor rimP
 gi|154153359|gb|ABS60591.1| protein of unknown function DUF150 [Fervidobacterium nodosum
           Rt17-B1]
          Length = 152

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 1/91 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++ +P++  M      +   ++    +L I +++ D  ++ RDCE +S  I  +LD  
Sbjct: 12  VRAIAEPIVTSMGLELFDVKYRIQAGKWVLSIIIDKLDDYVSTRDCELVSYEIEKVLDSH 71

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           + I G Y LEVSSPG+DRP+ +  DF R+ G
Sbjct: 72  DFIPGRYYLEVSSPGLDRPLKKIEDFRRFVG 102


>gi|261416679|ref|YP_003250362.1| protein of unknown function DUF150 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373135|gb|ACX75880.1| protein of unknown function DUF150 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326580|gb|ADL25781.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 150

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 18/145 (12%)

Query: 37  SFRSVQISLLEE------KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE-NIIEGH 89
           + +S  ++L+E       K   L+IF+++ +G +T+ DC  +S  +S  LD++  +IEG 
Sbjct: 14  ACKSASVTLVEADVFRAGKRKTLRIFIDKPEG-VTIDDCTNVSHFLSDALDLDPELIEGA 72

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LEVSSPGIDRP+   +DF R  G ++   +  S+G  + + G+++   E    L+ + 
Sbjct: 73  YTLEVSSPGIDRPLKSMADFERNKGRLL--RVTRSTG--KPVTGELLNADEENLTLKLKG 128

Query: 150 RGEKDMNELQIAISFDSLLSARLIV 174
                 N  +I I    +LSA++ V
Sbjct: 129 ------NAGEIVIPRSEVLSAKVEV 147


>gi|66767927|ref|YP_242689.1| hypothetical protein XC_1603 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|81306096|sp|Q4UWA4|RIMP_XANC8 RecName: Full=Ribosome maturation factor rimP
 gi|66573259|gb|AAY48669.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 196

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 6/121 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L++++     E+ D  + + DCE +S+ 
Sbjct: 5   ATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 M 136
           +
Sbjct: 125 V 125


>gi|207723238|ref|YP_002253637.1| hypothetical protein RSMK00472 [Ralstonia solanacearum MolK2]
 gi|206588434|emb|CAQ35397.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 144

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 5/93 (5%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY-RLEVSSPGIDRPMVRKSDFL 110
           LL++++++ +  + + DCE++S  ++ + +VEN+   HY RLEVSSPG+DRP+   +DF 
Sbjct: 10  LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV---HYERLEVSSPGLDRPLRTLTDFT 66

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMG-TSETG 142
           R+ G  V   + L    ++   G +   T E G
Sbjct: 67  RFAGQEVKVTLRLPVEGQKNFTGIVQAPTGEPG 99


>gi|295696155|ref|YP_003589393.1| protein of unknown function DUF150 [Bacillus tusciae DSM 2912]
 gi|295411757|gb|ADG06249.1| protein of unknown function DUF150 [Bacillus tusciae DSM 2912]
          Length = 154

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +  + +P++E      V +  ++E  N  L++FV+R +G + + DC  +S+ +S  
Sbjct: 6   IAAVVEEIARPIVEGEGLELVDVEYVKEGANWFLRVFVDRPEGGVDIDDCSRVSERLSDR 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           LD  + I G Y LEVSSPGI+RP+     F R  G  V
Sbjct: 66  LDEIDPIPGSYFLEVSSPGIERPLKNMPAFRRALGQTV 103


>gi|284006666|emb|CBA71928.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 150

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++S+I   +E + F  V +  +  +   L+++++ ++G +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTSMISVPVEALGFEFVGLEFIRARVSTLRVYIDNENG-VTVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LE+SSPG++RP+   + + R+ G  V   + ++  +++K  G I   ++
Sbjct: 63  DVEDPISVLYNLEISSPGLERPLFTVAHYQRFIGKEVNLILRIAMQNRRKWQGIIKAVND 122


>gi|303256974|ref|ZP_07342988.1| DUF150-containing protein [Burkholderiales bacterium 1_1_47]
 gi|330999162|ref|ZP_08322881.1| hypothetical protein HMPREF9439_00503 [Parasutterella
           excrementihominis YIT 11859]
 gi|302860465|gb|EFL83542.1| DUF150-containing protein [Burkholderiales bacterium 1_1_47]
 gi|329575362|gb|EGG56906.1| hypothetical protein HMPREF9439_00503 [Parasutterella
           excrementihominis YIT 11859]
          Length = 186

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 5/103 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M ++  +  +I   +E + +  V +  L     L+++ +++D G +TL DCE++S  ++ 
Sbjct: 1   MAVSTQLFEMIDATVEGLGYELVDVEKLPRG--LIRVTIDKD-GGITLDDCEKVSNQLNN 57

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
            + VEN+   + RLEVSSPG+DRP+ R  DF+++ G  V  E+
Sbjct: 58  AMTVENV--DYDRLEVSSPGVDRPLKRPRDFVKFVGQNVHVEL 98


>gi|255284073|ref|ZP_05348628.1| hypothetical protein BRYFOR_09459 [Bryantella formatexigens DSM
           14469]
 gi|255265418|gb|EET58623.1| hypothetical protein BRYFOR_09459 [Bryantella formatexigens DSM
           14469]
          Length = 201

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           +++QP+++   F  V +  ++E  +  L+ ++++  G +T+ DCE +S+A + ILD ++ 
Sbjct: 59  AILQPIVDANGFELVDVEYVKEGGSWYLRAYIDKP-GGITVDDCELVSRAANDILDEQDF 117

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +E  Y  EVSSPG+ RP+ ++ DF+R  G  V
Sbjct: 118 VEESYIFEVSSPGLGRPLKKEKDFVRSIGEEV 149


>gi|167037625|ref|YP_001665203.1| hypothetical protein Teth39_1213 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|307264911|ref|ZP_07546473.1| protein of unknown function DUF150 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|320116040|ref|YP_004186199.1| hypothetical protein Thebr_1242 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|326389439|ref|ZP_08211006.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|226696278|sp|B0K9Q4|RIMP_THEP3 RecName: Full=Ribosome maturation factor rimP
 gi|166856459|gb|ABY94867.1| protein of unknown function DUF150 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|306920169|gb|EFN50381.1| protein of unknown function DUF150 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|319929131|gb|ADV79816.1| protein of unknown function DUF150 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325994444|gb|EGD52869.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 151

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 76/138 (55%), Gaps = 3/138 (2%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
             ++ PV+E+ +F  V +   +E  +  L+++++++ G +TL DC+ +S+ +S  LD  +
Sbjct: 9   KDLVMPVLEKNNFELVDVEYKKEGSHWYLRVYIDKE-GGITLDDCQLVSEYLSDRLDEVD 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETGF 143
            IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++  T +   
Sbjct: 68  PIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYAPIDKRKKFEGELIEFTGDKII 127

Query: 144 FLEKEKRGEKDMNELQIA 161
            L   +R E DM  + + 
Sbjct: 128 ILYNGERKEFDMKNVSLV 145


>gi|259585711|sp|A0KNE5|RIMP_AERHH RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 56/87 (64%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+  L+++++ + G +++ +C E+S  +  I+DVE+ I   Y LEVSSPG+DRP+ + + 
Sbjct: 33  KHSTLRVYIDGEHG-VSVENCAEVSHQVGAIMDVEDPITEEYYLEVSSPGLDRPLFKVAQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           F ++ G   A  + +++ +++K  G I
Sbjct: 92  FEKYVGQEAAVTLRMATNNRRKFKGVI 118


>gi|257463890|ref|ZP_05628276.1| putative cytoplasmic protein [Fusobacterium sp. D12]
 gi|317061419|ref|ZP_07925904.1| conserved hypothetical protein [Fusobacterium sp. D12]
 gi|313687095|gb|EFS23930.1| conserved hypothetical protein [Fusobacterium sp. D12]
          Length = 153

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  ++ P  E++    V +  +++     ++I+VE+ DG++ L DC  LS  I   +D  
Sbjct: 8   IEKIVTPEAEKLGLSLVDVEYMQDGGYWYVRIYVEKLDGDVNLEDCANLSGNIEDAVD-- 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
            +I+  + LEVSSPGI+RP+ +++DF+R+ G
Sbjct: 66  QLIDKKFFLEVSSPGIERPLKKEADFIRFTG 96


>gi|254283179|ref|ZP_04958147.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
 gi|219679382|gb|EED35731.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
          Length = 168

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 2/115 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +S ++ P IE + F    + LL   +    +++++R++G +T+ DC  +S+ IS 
Sbjct: 3   GKTTQLSELLTPTIESLGFELWGLELLPPFRKPTFRVYIDREEG-VTVDDCAMVSRHISG 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +LDVE+ I+  + LEVSSPGIDR + R   +  + G  +   + +    ++K  G
Sbjct: 62  VLDVEDPIQTEFTLEVSSPGIDRLLFRPEQYRLYIGEPIEVRLRMPFEGRRKFRG 116


>gi|21231946|ref|NP_637863.1| hypothetical protein XCC2513 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|188991043|ref|YP_001903053.1| hypothetical protein xccb100_1647 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|34223123|sp|Q8P7U5|RIMP_XANCP RecName: Full=Ribosome maturation factor rimP
 gi|226736393|sp|B0RRB2|RIMP_XANCB RecName: Full=Ribosome maturation factor rimP
 gi|21113675|gb|AAM41787.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|167732803|emb|CAP50997.1| YhbC family protein [Xanthomonas campestris pv. campestris]
          Length = 196

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 6/121 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L++++     E+ D  + + DCE +S+ 
Sbjct: 5   ATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 M 136
           +
Sbjct: 125 V 125


>gi|15836838|ref|NP_297526.1| hypothetical protein XF0233 [Xylella fastidiosa 9a5c]
 gi|9105044|gb|AAF83046.1|AE003877_1 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 215

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 83/157 (52%), Gaps = 14/157 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    LL     +L+++++     + +  +++ DCE +S+ +S
Sbjct: 23  EIVNLLAPKVETLGFELLGAEYLLVPSGAILRLYIDTPFAMQPECMVSIDDCERVSREVS 82

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LDVE  I G+Y LEVSSPG+DR +     F R     V   + L     ++L GKI+ 
Sbjct: 83  AYLDVEEPISGNYTLEVSSPGLDRRLFTLEQFARHYNQFVKVGLKLPQHGSRRLQGKIVR 142

Query: 138 TSET-GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +  GF +         +N +++A+ F+++  AR++
Sbjct: 143 VEQVDGFVVLL-------VNGVELAVDFNNIDKARIV 172


>gi|153814922|ref|ZP_01967590.1| hypothetical protein RUMTOR_01137 [Ruminococcus torques ATCC 27756]
 gi|317500434|ref|ZP_07958658.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089559|ref|ZP_08338458.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847953|gb|EDK24871.1| hypothetical protein RUMTOR_01137 [Ruminococcus torques ATCC 27756]
 gi|316898189|gb|EFV20236.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330404927|gb|EGG84465.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 155

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 2/136 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P++  + F  V +  ++E     L+ ++++  G +T+ DCE +S+  S ILD ++ I
Sbjct: 14  LLEPIVSALGFELVDVEYVKEAGTWYLRAYIDKP-GGITVDDCEAVSRKFSDILDEKDYI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++  G + G  E    + 
Sbjct: 73  PDSYVFEVSSPGLGRPLKKEKDFKRSIGEEVEIRTYRAIDRQKEFTGILKGFDENTVTII 132

Query: 147 KEKRGEKDMNELQIAI 162
            E   E+  +  +IA+
Sbjct: 133 YEDETEQVFDRAEIAL 148


>gi|299144045|ref|ZP_07037125.1| 15 kDa protein [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518530|gb|EFI42269.1| 15 kDa protein [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 153

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ LL IF+ + +G + + DC  +S+ I  ILD E+II+  Y LE+SSPG+DRP+  K D
Sbjct: 35  KHDLLSIFIYKKEG-IDINDCTNMSRIIESILDKEDIIDKPYYLEISSPGLDRPLKTKDD 93

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           + R  G+ V  ++  +  D +KLI  I+   +    +
Sbjct: 94  YRRNVGNEVTVKL-YAPLDGKKLIEGILENYDESIII 129


>gi|300704338|ref|YP_003745941.1| hypothetical protein RCFBP_20140 [Ralstonia solanacearum CFBP2957]
 gi|299072002|emb|CBJ43332.1| conserved protein of unknown function [Ralstonia solanacearum
           CFBP2957]
          Length = 149

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY-RLEVSSPGIDRPMVRKSDFL 110
           LL++++++ +  + + DCE++S  ++ + +VEN+   HY RLEVSSPG+DRP+   +DF 
Sbjct: 15  LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV---HYERLEVSSPGLDRPLRTLTDFT 71

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           R+ G  V   + L    ++   G +   +
Sbjct: 72  RFAGQEVKVTLRLPVDGQKNFTGIVQAPA 100


>gi|223038669|ref|ZP_03608962.1| conserved hypothetical protein [Campylobacter rectus RM3267]
 gi|222880071|gb|EEF15159.1| conserved hypothetical protein [Campylobacter rectus RM3267]
          Length = 142

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 6/99 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I++ +  G + L DCE++S+ +SPI DVE  + G Y LEVSSPG++R + + S F+ 
Sbjct: 28  IYRIYIAKP-GGVNLDDCEKVSRLLSPIFDVEPPLSGDYVLEVSSPGLERKLEKPSHFIS 86

Query: 112 WNGHV--VACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
             G +  ++ E+    G+ +KL GKI+   +    LE E
Sbjct: 87  SVGELAKISAEV---DGENKKLKGKILSADDDETSLESE 122


>gi|289207908|ref|YP_003459974.1| hypothetical protein TK90_0723 [Thioalkalivibrio sp. K90mix]
 gi|288943539|gb|ADC71238.1| protein of unknown function DUF150 [Thioalkalivibrio sp. K90mix]
          Length = 151

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E   F    +      K ++L+I+++  +G +T+ DC  +S+    +L+VE
Sbjct: 8   LKTLLAPVVEGQGFVFWGLEYHPGSKPVMLRIYIDSPEG-VTVDDCALVSEQAGAVLEVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             + G+Y LEVSSPGI+RP+     +  + GH V   +      ++   G ++G  E   
Sbjct: 67  QALRGNYTLEVSSPGIERPLFTPDQYRGYIGHPVKVRLSWPEHGRRNYRGTLIGVDEEMI 126

Query: 144 FLEKEKRG-EKDMNELQIAISFDSL 167
            +E +  G E  +N +  A   + L
Sbjct: 127 EVEVDGTGYELPLNAIHNARVLEQL 151


>gi|167766536|ref|ZP_02438589.1| hypothetical protein CLOSS21_01042 [Clostridium sp. SS2/1]
 gi|167711659|gb|EDS22238.1| hypothetical protein CLOSS21_01042 [Clostridium sp. SS2/1]
          Length = 154

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 64/104 (61%), Gaps = 3/104 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P+IE  +F  V +  ++E  N  L+++ +++ G + + DC  +S+++   LD E+ I
Sbjct: 14  LVLPIIEANNFELVDVEYVKEGANWYLRVYADKE-GGIAIDDCVLISRSLEEKLDAEDFI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           E  Y LEVSSPG+ RP+ ++ D++R  G  +  ++   + DKQK
Sbjct: 73  EDAYILEVSSPGLGRPLKKEKDYVRSVGKSIDIKL-YKAIDKQK 115


>gi|15895074|ref|NP_348423.1| hypothetical protein CA_C1798 [Clostridium acetobutylicum ATCC 824]
 gi|34223132|sp|Q97I55|RIMP_CLOAB RecName: Full=Ribosome maturation factor rimP
 gi|15024771|gb|AAK79763.1|AE007689_1 Uncharacterized protein, YhbC family [Clostridium acetobutylicum
           ATCC 824]
 gi|325509212|gb|ADZ20848.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 149

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 69/114 (60%), Gaps = 2/114 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +I+PV+E + +    I +++E     L++++++++G ++L DCE++S+AIS +LD ++ I
Sbjct: 8   IIRPVVESLGYEFYHIEIVKEDGERYLRVYIDKENG-ISLDDCEKVSRAISDLLDEKDPI 66

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              Y LEVSSPGI R +  +    ++ G+ V  ++  S        GK++  +E
Sbjct: 67  PYSYYLEVSSPGIYRTLFTEEHLKKYIGNTVDIKLKSSLEKSTNYSGKLIDVNE 120


>gi|262197039|ref|YP_003268248.1| hypothetical protein Hoch_3856 [Haliangium ochraceum DSM 14365]
 gi|262080386|gb|ACY16355.1| protein of unknown function DUF150 [Haliangium ochraceum DSM 14365]
          Length = 209

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 14/104 (13%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER-------------DDGNMTLRDCEELS 73
           + +PV     +  V +SL + +   L+Q+F++              +   ++L DCE +S
Sbjct: 39  IAEPVCASAGYELVDLSLTQSRVGWLVQVFIDHMHSDETSTVAGGEEASEVSLEDCEHVS 98

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + +S +LDVE+ +   Y LEVSSPG+DRP+   + F R+ GH V
Sbjct: 99  RELSAVLDVEDPLPFAYNLEVSSPGLDRPLRTVAHFQRFAGHEV 142


>gi|332283700|ref|YP_004415611.1| hypothetical protein PT7_0447 [Pusillimonas sp. T7-7]
 gi|330427653|gb|AEC18987.1| hypothetical protein PT7_0447 [Pusillimonas sp. T7-7]
          Length = 164

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 20/161 (12%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
            DI ++ Q  I  M    V++  +E   L LL++ ++R +G + + DCE++S+ +S + +
Sbjct: 2   ADIFALTQEAIAGMD---VELVDVERAPLGLLRVTIDRAEG-VRIEDCEQVSKHLSRVFE 57

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMGTSE 140
           VENI   + RLEV SPGIDRP+ R +DF+R+    V  EI L    D +K+   ++  SE
Sbjct: 58  VENI--DYKRLEVGSPGIDRPLKRVADFIRFANERV--EIKLREAIDNRKVYAGVLRVSE 113

Query: 141 T---------GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                      F LE E    K+  ++ +  +FD +  A+L
Sbjct: 114 NVASDPSANPVFGLELEPTSRKEPAQV-LDFAFDDVDRAKL 153


>gi|259016316|sp|Q9PGR5|RIMP_XYLFA RecName: Full=Ribosome maturation factor rimP
          Length = 199

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 83/157 (52%), Gaps = 14/157 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    LL     +L+++++     + +  +++ DCE +S+ +S
Sbjct: 7   EIVNLLAPKVETLGFELLGAEYLLVPSGAILRLYIDTPFAMQPECMVSIDDCERVSREVS 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LDVE  I G+Y LEVSSPG+DR +     F R     V   + L     ++L GKI+ 
Sbjct: 67  AYLDVEEPISGNYTLEVSSPGLDRRLFTLEQFARHYNQFVKVGLKLPQHGSRRLQGKIVR 126

Query: 138 TSET-GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +  GF +         +N +++A+ F+++  AR++
Sbjct: 127 VEQVDGFVVLL-------VNGVELAVDFNNIDKARIV 156


>gi|118443860|ref|YP_878212.1| hypothetical protein NT01CX_2139 [Clostridium novyi NT]
 gi|259585741|sp|A0Q0R0|RIMP_CLONN RecName: Full=Ribosome maturation factor rimP
 gi|118134316|gb|ABK61360.1| Hypothetical UPF0090 protein [Clostridium novyi NT]
          Length = 154

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 74/127 (58%), Gaps = 4/127 (3%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I+ +I+P++EE+++    I  + E+N   L+I+++   G + L DCE++S+ +S ILD 
Sbjct: 10  EINKLIKPIVEELNYELYYIEYVREQNENYLRIYIDSSKG-INLEDCEKVSRKVSDILDE 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRW-NGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           ++ I   Y LEVSSPGI+R +  +    ++ N  ++     L  G ++   G ++  ++ 
Sbjct: 69  KDPISDSYYLEVSSPGIERVLYTEEHLHKYTNNQIIVKLAKLFEGSREHQ-GNLISFNDD 127

Query: 142 GFFLEKE 148
              +EKE
Sbjct: 128 TVTIEKE 134


>gi|302878487|ref|YP_003847051.1| hypothetical protein Galf_1259 [Gallionella capsiferriformans ES-2]
 gi|302581276|gb|ADL55287.1| protein of unknown function DUF150 [Gallionella capsiferriformans
           ES-2]
          Length = 141

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 71/124 (57%), Gaps = 11/124 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++F+++ DG + + DC+ +S  ++ +  VENI   + RLEVSSPG+DR + +++DF+R
Sbjct: 28  LLRVFIDKPDG-IAVEDCQVVSNQLTRLFTVENI--DYDRLEVSSPGLDRALKKEADFIR 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           + G     ++ +    ++  IG ++G    G         + D+  + +AI   ++  AR
Sbjct: 85  FVGQKAQIKLRMPIAARKNFIG-VIGEINDGVL-------QLDVEGVPVAIELTNVDKAR 136

Query: 172 LIVT 175
           L+ T
Sbjct: 137 LVPT 140


>gi|58427438|gb|AAW76475.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 160

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 8/111 (7%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + + DCE +S+ +S  LDVE+ I GHY LEVSSPG+DRP+     F R  G      + L
Sbjct: 17  INVDDCERVSREVSAQLDVEDPISGHYTLEVSSPGVDRPLFTLEQFARHAGESTKIVLKL 76

Query: 124 SSGDKQKLIGKIMG-TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   +++  G+I+   +E G  +         ++   + I FD++  AR++
Sbjct: 77  AQDGRRRFQGEILRIDAEAGAVVFA-------IDGKDVQIGFDNIDKARIL 120


>gi|163802302|ref|ZP_02196196.1| hypothetical protein 1103602000417_AND4_14441 [Vibrio sp. AND4]
 gi|159173831|gb|EDP58645.1| hypothetical protein AND4_14441 [Vibrio sp. AND4]
          Length = 151

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 70/117 (59%), Gaps = 2/117 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   ++ +++  +E + +  V +  +    +  L+I+++ ++G + +  C E+S  +S 
Sbjct: 3   GLERQLTEMLEAPVEALGYELVGLEFIRAGAHSTLRIYIDHENG-INVDACAEVSHQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I
Sbjct: 62  VLDVEDPISVAYSLEVSSPGLERPLFKATHYEQFIGHEVSIVLKMAVANRRKWNGII 118


>gi|167040286|ref|YP_001663271.1| hypothetical protein Teth514_1649 [Thermoanaerobacter sp. X514]
 gi|300914370|ref|ZP_07131686.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X561]
 gi|307724394|ref|YP_003904145.1| hypothetical protein Thet_1251 [Thermoanaerobacter sp. X513]
 gi|226736395|sp|B0K1E0|RIMP_THEPX RecName: Full=Ribosome maturation factor rimP
 gi|166854526|gb|ABY92935.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X514]
 gi|300889305|gb|EFK84451.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X561]
 gi|307581455|gb|ADN54854.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X513]
          Length = 151

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 76/138 (55%), Gaps = 3/138 (2%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
             ++ P++E+ +F  V +   +E  +  L+++++++ G +TL DC+ +S+ +S  LD  +
Sbjct: 9   KDLVMPILEKNNFELVDVEYKKEGSHWYLRVYIDKE-GGITLDDCQLVSEYLSDRLDEVD 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETGF 143
            IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++  T +   
Sbjct: 68  PIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYTPIDKRKKFEGELIEFTGDKII 127

Query: 144 FLEKEKRGEKDMNELQIA 161
            L   +R E DM  + + 
Sbjct: 128 ILYNGERKEFDMKNVSLV 145


>gi|224438171|ref|ZP_03659106.1| hypothetical protein HcinC1_09335 [Helicobacter cinaedi CCUG 18818]
 gi|313144616|ref|ZP_07806809.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129647|gb|EFR47264.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 156

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 16/123 (13%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           +Q    +D   ++L+DC+ LS+ +SP+LDVE+I   +Y LEVSSPG+DR + +   +   
Sbjct: 45  MQNLSSKDSNAVSLQDCQILSELLSPLLDVEHINMDNYHLEVSSPGLDRILKKPQHYAFS 104

Query: 113 NGHVVACEIVLSSGDKQKLIGKI--MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            G +++ +++    DK  L G +  +  +E    ++KEK          I I F S+  A
Sbjct: 105 LGEMISLKLI----DKSSLQGILENVNDTEIALLVDKEK----------INIPFSSIKKA 150

Query: 171 RLI 173
           ++I
Sbjct: 151 KVI 153


>gi|88860546|ref|ZP_01135184.1| hypothetical protein PTD2_16017 [Pseudoalteromonas tunicata D2]
 gi|88817744|gb|EAR27561.1| hypothetical protein PTD2_16017 [Pseudoalteromonas tunicata D2]
          Length = 141

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 65/110 (59%), Gaps = 2/110 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P +E + F  + + +++  ++  L+++++  +G + + +C ++S+ +S ILDVE+ I
Sbjct: 1   MLEPAVEALGFELLGLEVVQAGRDSTLRLYIDHANG-INVDNCADVSRQVSAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              Y LEVSSPG+DRP+ +   F++  G  +     L    ++   G ++
Sbjct: 60  TNEYNLEVSSPGLDRPLFKPEHFIKAQGEEIRLRTKLPQDGRRNFKGDLI 109


>gi|188577682|ref|YP_001914611.1| hypothetical protein PXO_01301 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188522134|gb|ACD60079.1| YhbC family protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 176

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 56  FVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
             E+ +  + + DCE +S+ +S  LDVE+ I GHY LEVSSPG+DRP+     F R  G 
Sbjct: 25  LAEQPERVINVDDCERVSREVSAQLDVEDPISGHYTLEVSSPGVDRPLFTLEQFARHAGE 84

Query: 116 VVACEIVLSSGDKQKLIGKIMG-TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                + L+   +++  G+I+   +E G  +         ++   + I FD++  AR++
Sbjct: 85  STKIVLKLAQDGRRRFQGEILRIDAEAGAVVFA-------IDGKDVQIGFDNIDKARIL 136


>gi|283797336|ref|ZP_06346489.1| hypothetical protein CLOM621_07330 [Clostridium sp. M62/1]
 gi|291075008|gb|EFE12372.1| hypothetical protein CLOM621_07330 [Clostridium sp. M62/1]
 gi|295090488|emb|CBK76595.1| Uncharacterized protein conserved in bacteria [Clostridium cf.
           saccharolyticum K10]
          Length = 155

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 2/139 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + + + P++E+  F  V +  + E  L  L+ +++++ G +T+ DCE +S+ +   LD E
Sbjct: 11  VEAWLLPLLEKYKFELVDVEYVREAGLWYLRAYIDKE-GGITVDDCEVVSRELGDWLDKE 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+ RP+ ++ DF R  G  V   +      +++  G +        
Sbjct: 70  DFIADSYILEVSSPGLGRPLKKEKDFARSLGKAVEVRLYRPINRQKEFTGALKAYDADTV 129

Query: 144 FLEKEKRGEKDMNELQIAI 162
            L  E   E  + +  IA+
Sbjct: 130 TLSMEDESELVLEKSDIAL 148


>gi|116748666|ref|YP_845353.1| hypothetical protein Sfum_1226 [Syntrophobacter fumaroxidans MPOB]
 gi|259645123|sp|A0LHL6|RIMP_SYNFM RecName: Full=Ribosome maturation factor rimP
 gi|116697730|gb|ABK16918.1| protein of unknown function DUF150 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 168

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 10/149 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + +PVI       ++I    E    +L++FV+++ G +++ DC  +S+ +  +LDV 
Sbjct: 21  VWDLTEPVIRAEGMEIIEIEYRRESPGWVLRVFVDQE-GGVSVDDCARISRVVGDLLDVA 79

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +II   Y LEVSSPG++RP+ ++  F +  G V+  + ++  G ++   G +    E G 
Sbjct: 80  DIIHYPYHLEVSSPGLNRPLRKREQFAKVVGKVIEVKTLVPFGTRRNFKGIL---KEVGV 136

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +R   D +     I F ++  ARL
Sbjct: 137 -----ERIRMDCDNQLFEIPFSNMDRARL 160


>gi|288871536|ref|ZP_06117961.2| protein associated with NUS operon [Clostridium hathewayi DSM
           13479]
 gi|288863081|gb|EFC95379.1| protein associated with NUS operon [Clostridium hathewayi DSM
           13479]
          Length = 162

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 2/133 (1%)

Query: 31  PVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P++EE  F  V +  ++E  N  L+ +++++ G +T+ DCE +S+ +   LD ++ IE  
Sbjct: 24  PLMEEYHFELVDVEYVKEAGNWYLRAYIDKE-GGITVDDCEVVSRRLGDWLDEKDFIEDS 82

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LEVSSPG+ RP+ +  DF R  G  V  ++      ++   G +    +    +  E 
Sbjct: 83  YILEVSSPGLGRPLKKDKDFDRSIGKDVDIKLYKPMNKQKDYTGTLKAYDKDTVTVTVED 142

Query: 150 RGEKDMNELQIAI 162
             E  +N  +IA+
Sbjct: 143 GTELVLNRPEIAL 155


>gi|310828068|ref|YP_003960425.1| hypothetical protein ELI_2480 [Eubacterium limosum KIST612]
 gi|308739802|gb|ADO37462.1| Uncharacterized protein conserved in bacteria [Eubacterium limosum
           KIST612]
          Length = 154

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 3/107 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +I PV+E   +  V ++  +  K+ +L  +++  +G + L DCE +S+ +S ++D +
Sbjct: 10  LEELIAPVVEAEGYECVDVTFEKAGKDWVLTTYIDGPNG-IGLDDCEVVSRKLSDLMDEK 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLR-WNGHVVACEIVLSSGDKQ 129
           + IE  Y LEVSSPGIDRP+ ++ DF R  +  +V       +G KQ
Sbjct: 69  DPIEQSYLLEVSSPGIDRPLKKEKDFARNMDKRIVVSFYAPVNGSKQ 115


>gi|260589531|ref|ZP_05855444.1| putative cytoplasmic protein [Blautia hansenii DSM 20583]
 gi|260540099|gb|EEX20668.1| putative cytoplasmic protein [Blautia hansenii DSM 20583]
          Length = 154

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 57/89 (64%), Gaps = 2/89 (2%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++++P++ E  F  V +  ++E  N  L+ ++++ +G +T+ DCE +S+  S  LD E+ 
Sbjct: 13  ALLEPIVAEHDFELVDVEYVKEGSNFYLRAYIDKPEG-ITVDDCEVVSRTFSQKLDEEDF 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           I+  Y +EVSSPG+ RP+ ++ D+ R  G
Sbjct: 72  IDEAYIMEVSSPGLGRPLKKEKDYKRSMG 100


>gi|315126156|ref|YP_004068159.1| hypothetical protein PSM_A1065 [Pseudoalteromonas sp. SM9913]
 gi|315014670|gb|ADT68008.1| hypothetical protein PSM_A1065 [Pseudoalteromonas sp. SM9913]
          Length = 141

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 63/113 (55%), Gaps = 2/113 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P +E + F    +  ++  ++  L++++  +DG +++ +C + S+ IS ILDVE+ I
Sbjct: 1   MLTPAVEMLGFELHGLEFVQAGRHSTLRVYIAHEDG-ISVDNCADASRQISAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
              Y LEVSSPG+DRP+ ++  + +  G  V     L    ++   G ++  S
Sbjct: 60  TNEYDLEVSSPGVDRPLFKQDHYEQAQGEEVRVRTKLPQDGRRNFKGDLIAVS 112


>gi|222099942|ref|YP_002534510.1| hypothetical protein CTN_0968 [Thermotoga neapolitana DSM 4359]
 gi|254807290|sp|B9K861|RIMP_THENN RecName: Full=Ribosome maturation factor rimP
 gi|221572332|gb|ACM23144.1| Hypothetical Protein CTN_0968 [Thermotoga neapolitana DSM 4359]
          Length = 150

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 4/89 (4%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E +  +L++ ++   G +++RDCE  S+ +   LD E++IE  Y LEVSSPG+DRP+   
Sbjct: 33  ESRGWVLRVVIDNPVGYVSVRDCELFSRELERFLDREDLIEHSYTLEVSSPGLDRPLRGP 92

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            D+ R+ G +      + + D +  IG+I
Sbjct: 93  KDYQRFTGKLAK----IITKDGKTFIGRI 117


>gi|239826653|ref|YP_002949277.1| hypothetical protein GWCH70_1151 [Geobacillus sp. WCH70]
 gi|259585779|sp|C5D9C5|RIMP_GEOSW RecName: Full=Ribosome maturation factor rimP
 gi|239806946|gb|ACS24011.1| protein of unknown function DUF150 [Geobacillus sp. WCH70]
          Length = 157

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++ +M    V I  ++E KN  L++F++ D+G + +  C  +S+ +S  LD  
Sbjct: 9   VEELVTPILADMDLELVDIEYVKEGKNWFLRVFIDSDNG-VDIEQCGMVSEKLSEKLDEV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G+++G   T  
Sbjct: 68  DPIPHNYFLEVSSPGAERPLKKPKDFTKAIGKNVYIKTYEPIEGEKEFEGELIGFDGTTV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +  + +  K      I I ++ + SARL V
Sbjct: 128 SVTVKDKTRKKT----IDIPYEKVASARLAV 154


>gi|197303043|ref|ZP_03168091.1| hypothetical protein RUMLAC_01770 [Ruminococcus lactaris ATCC
           29176]
 gi|197297898|gb|EDY32450.1| hypothetical protein RUMLAC_01770 [Ruminococcus lactaris ATCC
           29176]
          Length = 155

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           ++++P++ E+ F  V +  ++E     L+ ++++  G + + DCE +S+  S ILD ++ 
Sbjct: 13  TLLEPIVTELGFELVDVEYVKEGGTWYLRAYIDKP-GGIAVDDCEAVSRRFSDILDEKDY 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I   Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++ +G +    ++   +
Sbjct: 72  IADSYVFEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRAIDRQKEFVGLLKAYDDSTVTI 131

Query: 146 EKEKRGEKDMNELQIAI 162
             E   E+  +   IA+
Sbjct: 132 TYEDDTEQTFDRGDIAL 148


>gi|75908092|ref|YP_322388.1| hypothetical protein Ava_1871 [Anabaena variabilis ATCC 29413]
 gi|91208393|sp|Q3MBZ3|RIMP_ANAVT RecName: Full=Ribosome maturation factor rimP
 gi|75701817|gb|ABA21493.1| Protein of unknown function DUF150 [Anabaena variabilis ATCC 29413]
          Length = 153

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 1/131 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I+ +  PV E++    V I     ++  +L++ +     +  L DCE +S+A+   
Sbjct: 5   LVPPITDLAIPVAEQLGLEVVGIVFHTNQRPPVLRVDIRNPQQDTGLDDCERMSRALEAA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R +V   +F+ + G  V          +Q+ IG+++   
Sbjct: 65  LDATEIIPDAYVLEVSSPGISRQLVTDREFISFKGFPVIVSTSPPHEGQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKR 150
           ET  ++ ++ R
Sbjct: 125 ETKVYINQKGR 135


>gi|224373557|ref|YP_002607929.1| hypothetical protein NAMH_1540 [Nautilia profundicola AmH]
 gi|259585797|sp|B9L6E1|RIMP_NAUPA RecName: Full=Ribosome maturation factor rimP
 gi|223588517|gb|ACM92253.1| conserved hypothetical protein [Nautilia profundicola AmH]
          Length = 148

 Score = 62.0 bits (149), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 79/144 (54%), Gaps = 6/144 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +++ +I+ ++E+       I L EE  +   ++++ +  G ++L DC +++  ISPI D+
Sbjct: 5   ELNDIIKNIVEDNGCDLYDIELSEEGGHKYFRVYITKP-GGVSLNDCAKINNLISPIFDI 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ +EG Y LEVSSPG++R + +   F +  G  V     +++ D  KL G++    +  
Sbjct: 64  EDPVEGKYFLEVSSPGLERKLTKPEHFEKSIGEKVK----VTTNDGTKLKGELKSFIDNV 119

Query: 143 FFLEKEKRGEKDMNELQIAISFDS 166
             + KEK    D+ + +  I +++
Sbjct: 120 AEIGKEKVNFDDIKKAKTYIEWNT 143


>gi|320008231|gb|ADW03081.1| protein of unknown function DUF150 [Streptomyces flavogriseus ATCC
           33331]
          Length = 165

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 11/151 (7%)

Query: 25  ISSVIQPVI--EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +  +++P++  +E+    +++S    + +L ++ V+ +DG + L  C ELS++IS  LD 
Sbjct: 9   LRGLLEPLVSAKELDLEEIEVSRAGRRRVL-RVIVDSEDG-VELDTCAELSRSISEKLDE 66

Query: 83  ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + + E  Y LEVSSPG DRP+     ++R  G +      L+ G+  +L+ +I+G  + 
Sbjct: 67  TDAMGEDEYVLEVSSPGADRPLTEHRHYVRATGRLAR----LTLGEGGELVARILGVDDE 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G  LE    G K        ++FD +  AR+
Sbjct: 123 GLDLEVP--GVKGRKPTSRRVAFDEISRARV 151


>gi|167856226|ref|ZP_02478961.1| hypothetical protein HPS_08460 [Haemophilus parasuis 29755]
 gi|259585812|sp|B8F3J3|RIMP_HAEPS RecName: Full=Ribosome maturation factor rimP
 gi|167852646|gb|EDS23925.1| hypothetical protein HPS_08460 [Haemophilus parasuis 29755]
          Length = 153

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 62/105 (59%), Gaps = 2/105 (1%)

Query: 33  IEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           I+ M F  V +        L ++++++++ G +T+ DC ++S+ +S I DVE+ I   Y 
Sbjct: 16  IDAMGFELVGVECQRAGRFLTVRLYIDKE-GGVTVDDCSDVSRQVSAIFDVEDPIADKYN 74

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           LEVSSPG+DRP+   + + R+ G  +   + +   D++K  G+++
Sbjct: 75  LEVSSPGLDRPLFTLAHYQRFVGREIVVHLRIPMLDRRKWQGELV 119


>gi|167758064|ref|ZP_02430191.1| hypothetical protein CLOSCI_00402 [Clostridium scindens ATCC 35704]
 gi|167663961|gb|EDS08091.1| hypothetical protein CLOSCI_00402 [Clostridium scindens ATCC 35704]
          Length = 155

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           +++ P++EE  F  V +  ++E     L+ ++++  G + + DCE +S+ +S ILD ++ 
Sbjct: 13  AILMPIVEEHGFELVDVEYVKEGGTWYLRAYIDKP-GGINVDDCEVVSRRLSDILDEKDY 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           IE  Y LEVSSPG+ RP+ ++ DF R  G  V
Sbjct: 72  IEEAYILEVSSPGLGRPLKKEKDFKRSLGEEV 103


>gi|295102729|emb|CBL00274.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
           prausnitzii L2-6]
          Length = 161

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++++PV+E M  R   +   +E  +  L++ ++RD G M    C E+S A+ PILD  
Sbjct: 13  VEALVRPVVEGMGLRLWDVVFEKEGPDWYLRVLIDRD-GTMDTDTCAEVSHALDPILDEA 71

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           + I+  Y LEV SPG+ R + R   +    G  +  +++  + D  +    I+
Sbjct: 72  DPIDQSYYLEVGSPGLGRKLTRPEHYEALKGEKIGVKLIRPTADGVREFAGIL 124


>gi|289550943|ref|YP_003471847.1| hypothetical protein SLGD_01629 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180475|gb|ADC87720.1| hypothetical protein SLGD_01629 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 155

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 86/152 (56%), Gaps = 6/152 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++ ++IQPV+E +++  V++  ++E K+  L++ ++++ G + L DC   S+ IS +
Sbjct: 4   ITEEVETLIQPVLEALNYELVEVEFVKEGKDHFLRVSIDKE-GGVDLNDCTLASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I+  Y L+V+SPG +RP+ ++ D+ +     +   +     + ++ +G ++  +
Sbjct: 63  MDEHDPIKEMYYLDVASPGAERPIKKEQDYQKAIQQPIFVSLYAPIENNKEWLGILVEVT 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                +E +++ +K     QI+I  + +  AR
Sbjct: 123 AETITMEVKEKAKKK----QISIPRNKIAKAR 150


>gi|320530107|ref|ZP_08031177.1| hypothetical protein HMPREF9555_01262 [Selenomonas artemidis F0399]
 gi|320137540|gb|EFW29452.1| hypothetical protein HMPREF9555_01262 [Selenomonas artemidis F0399]
          Length = 149

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%)

Query: 31  PVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           PV  E+    V +  + E++  L+++++++ G + + DC  LS+ +  +LD E+ I   Y
Sbjct: 18  PVQPELEL--VDVEYVRERDWYLRVYIDKE-GGIDIEDCRMLSEHLEEVLDREDFISDAY 74

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            LEVSSPG+DR + +  DF R +G  V   +      K+ L G + G       L+ + R
Sbjct: 75  ILEVSSPGLDRVLRKARDFEREHGKRVDVALYAPLDGKKNLTGALTGYDGNVLILDDDVR 134


>gi|269961978|ref|ZP_06176333.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833301|gb|EEZ87405.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 151

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 69/117 (58%), Gaps = 2/117 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   ++ +++  +E   +  V +  +    +  L+I+++ ++G + +  C E+S  +S 
Sbjct: 3   GLERQLTEMLEAPVEASGYELVGLEFIRAGAHSTLRIYIDHENG-INVDACAEVSHQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I
Sbjct: 62  VLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWAGII 118


>gi|225570593|ref|ZP_03779618.1| hypothetical protein CLOHYLEM_06695 [Clostridium hylemonae DSM
           15053]
 gi|225160606|gb|EEG73225.1| hypothetical protein CLOHYLEM_06695 [Clostridium hylemonae DSM
           15053]
          Length = 155

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 3/104 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P++EE  F  V +  ++E     L+ ++++  G + + DCE++S+ +S ILD ++ I
Sbjct: 14  ILLPIVEEYGFELVDVEYVKEGSTWYLRAYIDKP-GGINIDDCEKVSRRLSDILDEKDYI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           +  Y +EVSSPG+ RP+ ++ DF R  G  V         DKQK
Sbjct: 73  DDAYIMEVSSPGLGRPLKKEKDFKRSLGEEVEIR-TYRMMDKQK 115


>gi|166712600|ref|ZP_02243807.1| hypothetical protein Xoryp_14385 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 196

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 82/159 (51%), Gaps = 14/159 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P ++ +    + +  L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVDSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHAGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MG-TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   +E G  +         ++   + I FD++  AR++
Sbjct: 125 LRIDAEAGAVVFA-------VDGKDVQIGFDNIDKARIL 156


>gi|149909282|ref|ZP_01897938.1| hypothetical protein PE36_05678 [Moritella sp. PE36]
 gi|149807599|gb|EDM67547.1| hypothetical protein PE36_05678 [Moritella sp. PE36]
          Length = 152

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 66/112 (58%), Gaps = 2/112 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++P +E + F  V I      K+  L ++++ ++G + + DC ++S  +S I+DVE
Sbjct: 8   LTDLLEPTVEMLGFELVGIEFTRAGKHSTLLVYIDHENG-IFVDDCSKVSHQLSAIMDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + I   Y LEVSSPG++RP+ + + +  + G  +   + ++   ++KL G I
Sbjct: 67  DPISTEYFLEVSSPGMERPLFKVAHYQEYCGSEIKALLRMAVNGRRKLRGVI 118


>gi|307720624|ref|YP_003891764.1| hypothetical protein Saut_0703 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978717|gb|ADN08752.1| protein of unknown function DUF150 [Sulfurimonas autotrophica DSM
           16294]
          Length = 150

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 5/102 (4%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           ++L +C EL+  ISP+LDV   I G YRLEV SPGI+R +     F +  G  V+    L
Sbjct: 49  VSLDECVELTHLISPLLDVTPPISGEYRLEVGSPGIERKLTTLDHFKKSVGENVS----L 104

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKR-GEKDMNELQIAISF 164
              +K+KL GK++       F+EKE +  E D N ++ A ++
Sbjct: 105 LLDEKEKLKGKLVKVEGNKLFVEKEGQIHEVDFNAVKKAKTY 146


>gi|284030870|ref|YP_003380801.1| hypothetical protein Kfla_2937 [Kribbella flavida DSM 17836]
 gi|283810163|gb|ADB32002.1| protein of unknown function DUF150 [Kribbella flavida DSM 17836]
          Length = 178

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 70/115 (60%), Gaps = 9/115 (7%)

Query: 29  IQPVIEEM--SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++P++E+      + +++    + LL ++ V+RD G ++L D  ++++AIS  LD ++++
Sbjct: 17  LRPLVEQFGCDLEAAEVTPAGRRRLL-RVLVDRD-GGISLDDVADVTRAISKALDADDVM 74

Query: 87  -EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            +G Y LEVSSPG+DRP+     + R    +VA  + L SGD  KL G+I   S+
Sbjct: 75  GDGAYTLEVSSPGVDRPLTLPRHWRRNISRLVA--VTLHSGD--KLTGRIKTVSD 125


>gi|170727896|ref|YP_001761922.1| hypothetical protein Swoo_3563 [Shewanella woodyi ATCC 51908]
 gi|226703865|sp|B1KRR2|RIMP_SHEWM RecName: Full=Ribosome maturation factor rimP
 gi|169813243|gb|ACA87827.1| protein of unknown function DUF150 [Shewanella woodyi ATCC 51908]
          Length = 151

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 9/125 (7%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +++++++ + G + + DC E+S+ +S +LDVE+ I   Y LEVSSPG+DRP+     
Sbjct: 33  KHSVVRVYIDNEKG-VFIEDCAEVSRQVSAVLDVEDPISTEYTLEVSSPGVDRPLFNAEQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           +  +    V  ++ +     + L G + G       L        D NEL IA+  D++ 
Sbjct: 92  YTAYIDETVKIQLTMPVAGSRNLKGTVTGVEGQMLTL------TVDGNELIIAL--DNIR 143

Query: 169 SARLI 173
              LI
Sbjct: 144 KGNLI 148


>gi|15604409|ref|NP_220926.1| hypothetical protein RP554 [Rickettsia prowazekii str. Madrid E]
 gi|6647940|sp|Q9ZCZ6|RIMP_RICPR RecName: Full=Ribosome maturation factor rimP
 gi|3861103|emb|CAA15003.1| unknown [Rickettsia prowazekii]
          Length = 117

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +A  I+++I+  + +M F  V +        ++++ ++  +GN +++ DC  +S+ IS I
Sbjct: 4   IAQQITNIIEESLTDMGFELVLVKFKGVSPKVVEVLIDSLNGNKISIEDCTNVSRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           LDVE++IE  Y LEVSS GI+R +V+  ++ R+ G  V  ++
Sbjct: 64  LDVEDLIEEAYSLEVSSSGIERTLVKFENYNRFLGREVKIKL 105


>gi|23099049|ref|NP_692515.1| hypothetical protein OB1594 [Oceanobacillus iheyensis HTE831]
 gi|34223115|sp|Q8EQU5|RIMP_OCEIH RecName: Full=Ribosome maturation factor rimP
 gi|22777277|dbj|BAC13550.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 156

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 12/152 (7%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P++EE +   V I  ++E KN  L+++++++ G + + +C E+S+ +S  LD  + I
Sbjct: 12  LVTPILEEKNLELVDIEYVKEGKNWFLRVYIDKE-GGIDIMECGEVSELLSEKLDESDPI 70

Query: 87  EGHYRLEVSSPGIDRPMVRKSDF---LRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
              Y LEVSSPG++RP+ +K DF   +  N  V   E +  S + +  +    G + T  
Sbjct: 71  TEAYFLEVSSPGVERPLKKKEDFDASIGKNIFVKLYEPIDGSKEYEGTLQSFDGETVTME 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +  K ++        Q+ I +  +  AR+ VT
Sbjct: 131 YKVKTRKK-------QVEIPYSKIAKARIAVT 155


>gi|238927233|ref|ZP_04658993.1| protein of hypothetical function DUF150 [Selenomonas flueggei ATCC
           43531]
 gi|238884908|gb|EEQ48546.1| protein of hypothetical function DUF150 [Selenomonas flueggei ATCC
           43531]
          Length = 163

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 10/122 (8%)

Query: 25  ISSVIQPVIEEM---------SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           +S+ I+  +EEM         +   V +  ++E++  L++++++  G + + DC+ LS+ 
Sbjct: 15  MSAKIEERVEEMVRGLLTDLPAIELVDVEYVKERDSYLRVYIDKT-GGIDIDDCQSLSER 73

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  +LD E+ I   Y LEVSSPG+DR + ++ DF R +G  V   +      K++  G +
Sbjct: 74  LEEMLDREDFIPDAYILEVSSPGLDRVLRKERDFTREHGRTVDVTLYAPFEGKKQWTGTL 133

Query: 136 MG 137
            G
Sbjct: 134 AG 135


>gi|145589411|ref|YP_001156008.1| hypothetical protein Pnuc_1229 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|226696286|sp|A4SY80|RIMP_POLSQ RecName: Full=Ribosome maturation factor rimP
 gi|145047817|gb|ABP34444.1| protein of unknown function DUF150 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 163

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 6/112 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELSQAISPILDVENI 85
           +I   +E + +  V+I    E   LL++ +E  D    +++ DCE++S  +S  L VENI
Sbjct: 6   IIAAELENLGYTLVEIE--REAGGLLRVTIENPDYERLISVLDCEKVSHQLSYALPVENI 63

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
              + RLE+SSPG+DRP+   +DF R+ G  V  ++ +++G+++   G + G
Sbjct: 64  --PYERLEISSPGLDRPVKSAADFERFTGMEVDLKLRVAAGNRKNFRGVLQG 113


>gi|218247499|ref|YP_002372870.1| hypothetical protein PCC8801_2713 [Cyanothece sp. PCC 8801]
 gi|257061165|ref|YP_003139053.1| hypothetical protein Cyan8802_3390 [Cyanothece sp. PCC 8802]
 gi|226701501|sp|B7K5I1|RIMP_CYAP8 RecName: Full=Ribosome maturation factor rimP
 gi|218167977|gb|ACK66714.1| protein of unknown function DUF150 [Cyanothece sp. PCC 8801]
 gi|256591331|gb|ACV02218.1| protein of unknown function DUF150 [Cyanothece sp. PCC 8802]
          Length = 153

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 1/146 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I ++  P+ E+     V +     K   +L++ +    G  +L DCE +S+A+  +
Sbjct: 5   LIPQIINLATPIAEDRGLEVVDVVFQTNKRPPVLRVDIRNSQGETSLDDCEAVSRALEAV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   ++ G Y LE+SSPGI R +    +F+ + G  V     +   D ++  G++ G  
Sbjct: 65  LDESQVMGGSYVLEISSPGISRQLHSDREFISFKGFAVIVTTEIPYLDHKEWRGQLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFD 165
           E+  ++ ++ R      EL   +  D
Sbjct: 125 ESAVYINQKGRAIAIPRELIAKVQLD 150


>gi|256750787|ref|ZP_05491672.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256750370|gb|EEU63389.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 151

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 76/138 (55%), Gaps = 3/138 (2%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
             ++ P++E+ +F  V +   +E  +  L+++++++ G +TL DC+ +S+ +S  LD  +
Sbjct: 9   KDLVMPILEKNNFELVDVEYKKEGSHWYLRVYIDKE-GGITLDDCQLVSEYLSDRLDEVD 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETGF 143
            IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++  T +   
Sbjct: 68  PIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYSPIDKRKKFEGELIEFTGDKII 127

Query: 144 FLEKEKRGEKDMNELQIA 161
            L   +R E DM  + + 
Sbjct: 128 ILYNGERKEFDMKNVSLV 145


>gi|170759112|ref|YP_001787733.1| hypothetical protein CLK_1798 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|226695970|sp|B1KWL1|RIMP_CLOBM RecName: Full=Ribosome maturation factor rimP
 gi|169406101|gb|ACA54512.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 153

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 70/123 (56%), Gaps = 2/123 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P++E +++    I  ++E K   L+I+++ ++G  +L  CE++S+A+S 
Sbjct: 5   NLIENLKKQIEPIVEGLNYELYHIEFVKEGKENYLRIYIDSENG-ASLEGCEKVSRAVSE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIILNLYSPIDKKKKYEGELIDF 123

Query: 139 SET 141
           +E 
Sbjct: 124 NEN 126


>gi|329896245|ref|ZP_08271423.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC3088]
 gi|328921916|gb|EGG29283.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC3088]
          Length = 155

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 81/151 (53%), Gaps = 10/151 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +++ +++  +E M F    +    + KN LL+++++R+ G + + DC ++S+ IS ILD
Sbjct: 10  AELADLLRATVEAMGFALWGLEFRAQGKNSLLRVYIDREAG-VQVDDCAQVSRQISGILD 68

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I G Y LEVSSPGIDR +       ++ G  +  ++ +    ++   G ++G  + 
Sbjct: 69  VEDPIAGEYNLEVSSPGIDRLLFSLEQCQQYVGEWLEVKLRVPFEGRKNFNGTLVGIEDQ 128

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +         +++ +  + FDS+  A++
Sbjct: 129 DVVVR--------IDDDEYVLPFDSIDKAKV 151


>gi|156975665|ref|YP_001446572.1| hypothetical protein VIBHAR_03398 [Vibrio harveyi ATCC BAA-1116]
 gi|166990836|sp|A7MUV0|RIMP_VIBHB RecName: Full=Ribosome maturation factor rimP
 gi|156527259|gb|ABU72345.1| hypothetical protein VIBHAR_03398 [Vibrio harveyi ATCC BAA-1116]
          Length = 151

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 69/117 (58%), Gaps = 2/117 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   ++ +++  +E   +  V +  +    +  L+I+++ ++G + +  C E+S  +S 
Sbjct: 3   GLERQLTEMLEAPVEATGYELVGLEFIRAGAHSTLRIYIDHENG-INVDACAEVSHQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I
Sbjct: 62  VLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGII 118


>gi|254519188|ref|ZP_05131244.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226912937|gb|EEH98138.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 152

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  +++P+ EE+++    I  ++E     L+I++++D G + L DCE LS+ +S ++D +
Sbjct: 10  IDQLVRPIAEELNYEIYHIEYVKENGEYYLRIYIDKD-GGIALSDCEALSRRVSDVMDEK 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+  Y LEVSSPG++R +     F +  G  +      S   ++ + G +   S+   
Sbjct: 69  DPIKEAYFLEVSSPGLNRTLFTDDHFKKQIGKEIMVRFTKSLNGRKNIKGILKEVSDDSV 128

Query: 144 FLEKE 148
            +E +
Sbjct: 129 IVETD 133


>gi|291546818|emb|CBL19926.1| Uncharacterized protein conserved in bacteria [Ruminococcus sp.
           SR1/5]
          Length = 120

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 56/86 (65%), Gaps = 3/86 (3%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           +++ P++E   F  V +  ++E     L+ ++++  G +T+ DCE++S+A S ILD ++ 
Sbjct: 13  AILTPIVESRGFELVDVEYVKEAGTWYLRGYIDKP-GGITVNDCEDVSRAFSDILDEQDF 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLR 111
           IE  Y +E+SSPG+DRP+ +K   LR
Sbjct: 72  IEDSYIMEISSPGLDRPL-KKEKTLR 96


>gi|114562166|ref|YP_749679.1| hypothetical protein Sfri_0988 [Shewanella frigidimarina NCIMB 400]
 gi|114333459|gb|ABI70841.1| protein of unknown function DUF150 [Shewanella frigidimarina NCIMB
           400]
          Length = 165

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 2/104 (1%)

Query: 33  IEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           +E + F+   I  ++  ++ +L++F++ ++G + + DC E S+ +S ++DVE+ I   Y 
Sbjct: 30  VEALGFKLWGIEYIQAGRHSILRVFIDHENG-INIEDCAEASRQVSAVMDVEDPISTEYT 88

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LEVSSPG+DRP+     +  + G     ++ +     + L G I
Sbjct: 89  LEVSSPGVDRPLFTAEQYRAYIGEETKVQLTMPVAGSRNLKGVI 132


>gi|126175441|ref|YP_001051590.1| hypothetical protein Sbal_3241 [Shewanella baltica OS155]
 gi|153001791|ref|YP_001367472.1| hypothetical protein Shew185_3282 [Shewanella baltica OS185]
 gi|160876525|ref|YP_001555841.1| hypothetical protein Sbal195_3419 [Shewanella baltica OS195]
 gi|217972313|ref|YP_002357064.1| hypothetical protein Sbal223_1126 [Shewanella baltica OS223]
 gi|304410267|ref|ZP_07391886.1| protein of unknown function DUF150 [Shewanella baltica OS183]
 gi|307302022|ref|ZP_07581780.1| protein of unknown function DUF150 [Shewanella baltica BA175]
 gi|166990740|sp|A3D7K8|RIMP_SHEB5 RecName: Full=Ribosome maturation factor rimP
 gi|166990756|sp|A6WRH0|RIMP_SHEB8 RecName: Full=Ribosome maturation factor rimP
 gi|189040141|sp|A9KZX3|RIMP_SHEB9 RecName: Full=Ribosome maturation factor rimP
 gi|254799945|sp|B8E6N0|RIMP_SHEB2 RecName: Full=Ribosome maturation factor rimP
 gi|125998646|gb|ABN62721.1| protein of unknown function DUF150 [Shewanella baltica OS155]
 gi|151366409|gb|ABS09409.1| protein of unknown function DUF150 [Shewanella baltica OS185]
 gi|160862047|gb|ABX50581.1| protein of unknown function DUF150 [Shewanella baltica OS195]
 gi|217497448|gb|ACK45641.1| protein of unknown function DUF150 [Shewanella baltica OS223]
 gi|304351676|gb|EFM16075.1| protein of unknown function DUF150 [Shewanella baltica OS183]
 gi|306914060|gb|EFN44481.1| protein of unknown function DUF150 [Shewanella baltica BA175]
 gi|315268719|gb|ADT95572.1| protein of unknown function DUF150 [Shewanella baltica OS678]
          Length = 151

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 79/150 (52%), Gaps = 10/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++  +E + F+   I  ++  K+  L++F++ ++G + + DC   S+ +S +LDVE
Sbjct: 8   LAEMLKVPVEALGFQLWGIEYVQAGKHSTLRVFIDGENG-INIEDCANASRQVSAVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I  T+  G 
Sbjct: 67  DPISTEYTLEVSSPGVDRPLFTAEQYAGYVGEDVKLQLTMPVDGSRNLKGAI--TAVDGQ 124

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            L  +  G+      ++ ++ D++    LI
Sbjct: 125 MLSLKVNGK------ELVVALDNIRKGNLI 148


>gi|239982634|ref|ZP_04705158.1| hypothetical protein SalbJ_24601 [Streptomyces albus J1074]
 gi|291454475|ref|ZP_06593865.1| UPF0090 protein [Streptomyces albus J1074]
 gi|291357424|gb|EFE84326.1| UPF0090 protein [Streptomyces albus J1074]
          Length = 174

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 16/158 (10%)

Query: 21  LAGDISSVIQPVI--EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           L+  +  +I+P++  +E+    V ++    K  +L++ V+ DDG + L  C +LS+ +S 
Sbjct: 5   LSDRLRELIEPLVSSQELDLEEVTVTPAG-KRRVLRVVVDSDDG-VQLDTCADLSRTVSA 62

Query: 79  ILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            LD  +++ E  Y LEV+SPG DRP+     F+R  G +V   +   +G  ++L+ +I  
Sbjct: 63  RLDETDLMGESEYVLEVTSPGADRPLSEYRHFVRATGRLVKFHLTPDAG-AEELVARIEA 121

Query: 138 TSETGFFLE---------KEKRGE-KDMNELQIAISFD 165
             E G  LE         K++R   KD+   ++ I F+
Sbjct: 122 VDEEGLDLEVPGVKGRKPKQRRLPLKDVARARVEIEFN 159


>gi|238020477|ref|ZP_04600903.1| hypothetical protein GCWU000324_00359 [Kingella oralis ATCC 51147]
 gi|237867457|gb|EEP68463.1| hypothetical protein GCWU000324_00359 [Kingella oralis ATCC 51147]
          Length = 145

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 5/112 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  +  L  ++F+++  G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDTTLPGLGYELVDHELTAQGTL--RVFIDKA-GGITVDDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           NI   +  LE+SSPG+DRP+ + +DF+R+ G  +  +  L    ++  IG++
Sbjct: 59  NI--DYKNLEISSPGLDRPLKKAADFIRFAGSQIKLKTRLPVDGQKNFIGRL 108


>gi|259586208|sp|Q086H4|RIMP_SHEFN RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 2/104 (1%)

Query: 33  IEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           +E + F+   I  ++  ++ +L++F++ ++G + + DC E S+ +S ++DVE+ I   Y 
Sbjct: 16  VEALGFKLWGIEYIQAGRHSILRVFIDHENG-INIEDCAEASRQVSAVMDVEDPISTEYT 74

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LEVSSPG+DRP+     +  + G     ++ +     + L G I
Sbjct: 75  LEVSSPGVDRPLFTAEQYRAYIGEETKVQLTMPVAGSRNLKGVI 118


>gi|56460078|ref|YP_155359.1| alpha-hemolysin-like HlyA family protein [Idiomarina loihiensis
           L2TR]
 gi|81362146|sp|Q5QTY6|RIMP_IDILO RecName: Full=Ribosome maturation factor rimP
 gi|56179088|gb|AAV81810.1| Alpha-hemolysin-like protein, hlyA family [Idiomarina loihiensis
           L2TR]
          Length = 152

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 64/115 (55%), Gaps = 2/115 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +I+P +E + F    +  +   K   L+++++  +G +++ +C ++S  +S +LDVE
Sbjct: 8   LTDIIRPAVEALEFELWGVEFIRAGKFSTLRVYIDHPEG-ISVDNCADVSYQVSSLLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           + I   Y LEVSSPG++RP         +    VA E+V +  +K+K   +++  
Sbjct: 67  DPINVEYNLEVSSPGMERPFFNAQQMQPYINETVAFELVAAQKNKRKFKAELIAV 121


>gi|229544432|ref|ZP_04433490.1| protein of unknown function DUF150 [Bacillus coagulans 36D1]
 gi|229324917|gb|EEN90594.1| protein of unknown function DUF150 [Bacillus coagulans 36D1]
          Length = 155

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +  PV+E +    V I  ++E KN  L++++++++G + + +C  +S+ +   LD  
Sbjct: 8   VEQLASPVVEGLGLELVDIEYVKEGKNWFLRVYIDKENG-VDIEECGLVSERLGEKLDEV 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ +  DF R  G  V  +       ++   GK++       
Sbjct: 67  DPIPHNYFLEVSSPGAERPLKKARDFERAVGRTVLVKTYEPLDGEKTFQGKLIAFHNGCL 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE + + +K    ++  I +D + +ARL V
Sbjct: 127 TLECKVKTKK----IEKEIPYDKVANARLAV 153


>gi|308050586|ref|YP_003914152.1| hypothetical protein Fbal_2876 [Ferrimonas balearica DSM 9799]
 gi|307632776|gb|ADN77078.1| protein of unknown function DUF150 [Ferrimonas balearica DSM 9799]
          Length = 151

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L++F+E ++G +T+ DC  +S+ +  +LDVE+ I   Y LEVSSPG+DRP+     + R+
Sbjct: 37  LRLFIEHENG-ITVDDCAAVSRQVGAVLDVEDPITTEYNLEVSSPGLDRPLFTAEHYQRY 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMG 137
            G      + +    K+K  G+I+ 
Sbjct: 96  MGSEAVVVLNMPMEGKRKWQGEIVA 120


>gi|157363141|ref|YP_001469908.1| hypothetical protein Tlet_0274 [Thermotoga lettingae TMO]
 gi|166988603|sp|A8F3W0|RIMP_THELT RecName: Full=Ribosome maturation factor rimP
 gi|157313745|gb|ABV32844.1| protein of unknown function DUF150 [Thermotoga lettingae TMO]
          Length = 152

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 11/126 (8%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E + L+L++ ++  +  +++R CE +S  I   LD  ++I+  Y LEVSSPG+DRP+   
Sbjct: 34  ERRKLVLRVVIDDPENYVSIRQCEIVSSQIGNYLDEADLIDSSYILEVSSPGLDRPLREM 93

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
            D+ R+ G +   +I L  G  + L+G I  T+E    +E  K GE       I  SFD 
Sbjct: 94  KDYNRFVGRL--AKIWLKDG--KVLVGNIKETTENTVSIEL-KNGE------IITFSFDQ 142

Query: 167 LLSARL 172
           +   +L
Sbjct: 143 IKKGKL 148


>gi|315502522|ref|YP_004081409.1| hypothetical protein ML5_1726 [Micromonospora sp. L5]
 gi|315409141|gb|ADU07258.1| protein of unknown function DUF150 [Micromonospora sp. L5]
          Length = 216

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 8/127 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--- 83
           VI+PV+    +    +S+    +  ++++ V+  DG + L    ++S+A+S  LD     
Sbjct: 46  VIEPVVTAAGYDLEDLSVSRAGRRHVVRVIVD-ADGGINLDGVADVSRAVSAALDAAEEA 104

Query: 84  --NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +I+ G Y+LEVSSPG+DRP+     + R  G +V   +   +GD+Q L G+I    + 
Sbjct: 105 GGDIVAGEYQLEVSSPGVDRPLTLPRHWRRNAGRLVKVTVRGDAGDRQ-LTGRITAADDE 163

Query: 142 GFFLEKE 148
              LE +
Sbjct: 164 RVVLETD 170


>gi|238897564|ref|YP_002923243.1| hypothetical protein HDEF_0333 [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259585781|sp|C4K3F2|RIMP_HAMD5 RecName: Full=Ribosome maturation factor rimP
 gi|229465321|gb|ACQ67095.1| conserved hypothetical protein [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 155

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 67/115 (58%), Gaps = 1/115 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +  +I   +E + +  V I  ++ +  +L+I+++ ++G +T+  C ++S+ +S +L
Sbjct: 9   LVKKLKKIITAPVEGLGYELVGIEFIQSRQSVLRIYIDHEEG-VTVDSCADVSKEVSLVL 67

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           DVE+ I   Y LE+SSPG+DRP+     + ++ G  V   + ++  +++K  G I
Sbjct: 68  DVEDPITVPYNLEISSPGLDRPLFTARHYAQFIGEKVNLMLRMAIQNQRKWQGII 122


>gi|219870468|ref|YP_002474843.1| hypothetical protein HAPS_0200 [Haemophilus parasuis SH0165]
 gi|219690672|gb|ACL31895.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
          Length = 135

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 56/86 (65%), Gaps = 1/86 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           L ++++++++ G +T+ DC ++S+ +S I DVE+ I   Y LEVSSPG+DRP+   + + 
Sbjct: 17  LTVRLYIDKE-GGVTVDDCSDVSRQVSAIFDVEDPIADKYNLEVSSPGLDRPLFTLAHYQ 75

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIM 136
           R+ G  +   + +   D++K  G+++
Sbjct: 76  RFVGREIVVHLRIPMLDRRKWQGELV 101


>gi|224825863|ref|ZP_03698967.1| protein of unknown function DUF150 [Lutiella nitroferrum 2002]
 gi|224602087|gb|EEG08266.1| protein of unknown function DUF150 [Lutiella nitroferrum 2002]
          Length = 141

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 11/120 (9%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
            ++F+++  G +T+ DC  +S  ++ +  VENI   + RLEVSSPG+DRP+ ++SDF+R+
Sbjct: 29  FRVFLDKP-GGITVEDCVLVSNHLTRLFMVENI--DYERLEVSSPGLDRPLKKESDFVRF 85

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +G     +  +    ++K  G++ G  +    LE E R         +AI    +  ARL
Sbjct: 86  SGQRAKIKTRMPIEQQKKFSGRLAGVVDGAVQLEFEGR--------TVAIPLAVIDKARL 137


>gi|157164808|ref|YP_001466379.1| hypothetical protein CCC13826_1497 [Campylobacter concisus 13826]
 gi|259585734|sp|A7ZC71|RIMP_CAMC1 RecName: Full=Ribosome maturation factor rimP
 gi|112801640|gb|EAT98984.1| protein Tmden_0678 [Campylobacter concisus 13826]
          Length = 138

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 6/98 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + ++++ +D G ++L DCE++S+ +SPI DV   + G Y LEVSSPG++R + + S F  
Sbjct: 28  IFRVYITKD-GGVSLDDCEKVSRLLSPIFDVTPPVSGDYNLEVSSPGLERKLSKPSHFKA 86

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
             G +V  +      + +K  G+++   E    +E E+
Sbjct: 87  SVGELVKVQT-----EAEKFAGRLVKADEESIAVENEE 119


>gi|302865965|ref|YP_003834602.1| hypothetical protein Micau_1466 [Micromonospora aurantiaca ATCC
           27029]
 gi|302568824|gb|ADL45026.1| protein of unknown function DUF150 [Micromonospora aurantiaca ATCC
           27029]
          Length = 216

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 8/127 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--- 83
           VI+PV+    +    +S+    +  ++++ V+  DG + L    ++S+A+S  LD     
Sbjct: 46  VIEPVVTAAGYDLEDLSVSRAGRRHVVRVIVD-ADGGINLDGVADVSRAVSAALDAAEEA 104

Query: 84  --NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +I+ G Y+LEVSSPG+DRP+     + R  G +V   +   +GD+Q L G+I    + 
Sbjct: 105 GGDIVAGEYQLEVSSPGVDRPLTLPRHWRRNAGRLVKVTVRGDAGDRQ-LTGRITAADDE 163

Query: 142 GFFLEKE 148
              LE +
Sbjct: 164 RVVLETD 170


>gi|257460847|ref|ZP_05625948.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
 gi|257442178|gb|EEV17320.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
          Length = 139

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 12/113 (10%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G + L DCE LS+ +SPI DVE  +EG + LEV SPG++R + +   F    G +V    
Sbjct: 37  GGVGLDDCERLSRLLSPIYDVEPPLEGEWTLEVGSPGLERKLSKPQHFANSVGELVR--- 93

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LS  D QKL G+++   E G    +   GE       +++  D +  AR  V
Sbjct: 94  -LSCTDGQKLSGEVL-DCEGGVLRLRTDGGE-------VSVRLDEIKKARTYV 137


>gi|256544695|ref|ZP_05472067.1| hypothetical protein HMPREF0078_0324 [Anaerococcus vaginalis ATCC
           51170]
 gi|256399584|gb|EEU13189.1| hypothetical protein HMPREF0078_0324 [Anaerococcus vaginalis ATCC
           51170]
          Length = 152

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 8/135 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +   ++  I  + +  V I  + E KN +L+ F+ +D G +T+ DCE+ S  +S
Sbjct: 7   MDLISKLKENLESDINGLGYELVDIEFVNEGKNKILRFFIYKD-GGITIDDCEKTSNFLS 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSSP + RP+    D  R    ++  EI L +G  +K IGKI  
Sbjct: 66  ERLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELL--EIKLKNG--EKFIGKIKE 121

Query: 138 TSETG--FFLEKEKR 150
             E    F LE E++
Sbjct: 122 IKENSLIFTLENEQK 136


>gi|315639113|ref|ZP_07894280.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
 gi|315480817|gb|EFU71454.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
          Length = 139

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 12/114 (10%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G ++L DC  LS+ +SPI DVE  + G Y LEVSS G++R +     F +  G ++   
Sbjct: 36  EGGVSLEDCARLSEILSPIFDVEPPVSGEYFLEVSSAGLERKLSTLEHFEKSVGEMLK-- 93

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +++ +K+K+ GK++       FL+ EK         +I I F  +  A+  +
Sbjct: 94  --ITTSEKEKIQGKLLKVEGENIFLQDEKA--------EICIEFSQVKKAKTFI 137


>gi|57505608|ref|ZP_00371535.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
 gi|57016155|gb|EAL52942.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
          Length = 138

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 12/114 (10%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G ++L DC  LS+ +SPI DVE  + G Y LEVSS G++R +     F +  G ++   
Sbjct: 35  EGGVSLEDCARLSEILSPIFDVEPPVNGEYFLEVSSAGLERKLSTLEHFEKSVGEMLK-- 92

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +++ +K+K+ GK++       FL+ EK         +I I F  +  A+  +
Sbjct: 93  --ITTSEKEKIQGKLLKVEGENIFLQDEKA--------EICIEFSQVKKAKTFI 136


>gi|34223026|sp|Q9CMQ4|RIMP_PASMU RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           + L ++++++++ G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DR +     
Sbjct: 33  RYLTVRLYIDKE-GGVTVEDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRALFTLDQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + R+ G  +   + +   D++K  GK+
Sbjct: 92  YQRYIGQEIVVHLRIPVLDRRKWQGKL 118


>gi|260914258|ref|ZP_05920731.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631891|gb|EEX50069.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 162

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 1/85 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           L ++++++++ G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DR +   + + 
Sbjct: 46  LTVRLYIDKE-GGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRALFTLAQYQ 104

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKI 135
           R+ G  +   + +   D++K  GK+
Sbjct: 105 RYIGQDIVVHLRIPVLDRRKWQGKL 129


>gi|182435607|ref|YP_001823326.1| hypothetical protein SGR_1814 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776241|ref|ZP_08235506.1| Ribosome maturation factor rimP [Streptomyces cf. griseus
           XylebKG-1]
 gi|226695980|sp|B1VYN8|RIMP_STRGG RecName: Full=Ribosome maturation factor rimP
 gi|178464123|dbj|BAG18643.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326656574|gb|EGE41420.1| Ribosome maturation factor rimP [Streptomyces cf. griseus
           XylebKG-1]
          Length = 167

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 9/151 (5%)

Query: 25  ISSVIQPVI--EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +  +++P++  +++    +++S    + +L +I V+ ++G + L  C ELS+AIS  LD 
Sbjct: 9   LRGLLEPLVSAQQLDLEEIEVSRAGRRGVL-RIIVDSEEG-VELDACAELSRAISEKLDE 66

Query: 83  ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + + EG Y LEVSSPG DRP+     ++R  G +      L+     +L+ +I+   E 
Sbjct: 67  TDAMGEGEYVLEVSSPGADRPLTEHRHYVRATGRL--ARFHLAGDGSGELVARILAVDEE 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G  LE    G K        ++FD +  AR+
Sbjct: 125 GLDLEVP--GVKGRKPTARRLAFDEIARARV 153


>gi|153939522|ref|YP_001391720.1| hypothetical protein CLI_2478 [Clostridium botulinum F str.
           Langeland]
 gi|166987487|sp|A7GG10|RIMP_CLOBL RecName: Full=Ribosome maturation factor rimP
 gi|152935418|gb|ABS40916.1| conserved hypothetical protein [Clostridium botulinum F str.
           Langeland]
 gi|295319746|gb|ADG00124.1| conserved hypothetical protein [Clostridium botulinum F str.
           230613]
          Length = 153

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 70/122 (57%), Gaps = 2/122 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+A+S +
Sbjct: 6   LIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAVSEL 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +  +   K+K  G+++  +
Sbjct: 65  LDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSAIDKKKKYEGELVDFN 124

Query: 140 ET 141
           E 
Sbjct: 125 EN 126


>gi|241662812|ref|YP_002981172.1| hypothetical protein Rpic12D_1208 [Ralstonia pickettii 12D]
 gi|309782265|ref|ZP_07676993.1| hypothetical protein HMPREF1004_03620 [Ralstonia sp. 5_7_47FAA]
 gi|240864839|gb|ACS62500.1| protein of unknown function DUF150 [Ralstonia pickettii 12D]
 gi|308918958|gb|EFP64627.1| hypothetical protein HMPREF1004_03620 [Ralstonia sp. 5_7_47FAA]
          Length = 162

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 5/119 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN
Sbjct: 3   LTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAENGVVIEDCEKVSHQLTRVFEVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETG 142
           +   + RLEVSSPG+DRP+   +DF R+ G      + L    ++   G I   T E G
Sbjct: 61  V--NYERLEVSSPGLDRPLRTLADFTRFAGLEAKVTLRLPVNGQKNFTGIIQAPTGEPG 117


>gi|225016951|ref|ZP_03706143.1| hypothetical protein CLOSTMETH_00866 [Clostridium methylpentosum
           DSM 5476]
 gi|224950265|gb|EEG31474.1| hypothetical protein CLOSTMETH_00866 [Clostridium methylpentosum
           DSM 5476]
          Length = 177

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 69/121 (57%), Gaps = 2/121 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+ G       ++++++P+++++      +   +E  +  L++F+++D G M + DCE +
Sbjct: 20  RMAGKGNTVSAVTALVKPIVDDLGLILWDVVFEKEGASWFLRVFIDKD-GIMEVDDCEAV 78

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ ++P+LD  + IE  Y LEVSS G+ R + R   F R+ G  V  ++  +   +++ +
Sbjct: 79  SKRLNPLLDETDPIEQSYYLEVSSAGLGRRLKRPEHFARFLGDEVTVKLYRAVDKRKEFV 138

Query: 133 G 133
           G
Sbjct: 139 G 139


>gi|237748746|ref|ZP_04579226.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229380108|gb|EEO30199.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 162

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 5/105 (4%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG---HVVA 118
           GN++L DCE++S+ +S +L VE++   + RLEVSSPG+DRP+ + +DF+R+ G   HV  
Sbjct: 42  GNISLEDCEKVSRQLSHVLMVEDV--DYDRLEVSSPGLDRPLKKFADFVRFVGMEAHVKL 99

Query: 119 CEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS 163
            + V    +++   G ++        LE E + E + + L   I+
Sbjct: 100 RKPVTGMSNRKTFQGILLAPEGDELALEFEGKDENNNSVLHFTIA 144


>gi|283955315|ref|ZP_06372815.1| hypothetical protein C414_000440054 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793229|gb|EFC31998.1| hypothetical protein C414_000440054 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 147

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 10/111 (9%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + L DC  LS+ +SPI DVE  + G Y LEVSSPG++R + +   F +  G +V     +
Sbjct: 45  VNLDDCARLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLGKIEHFAKSIGELVK----I 100

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++ +K+K+  KIM   +    LE  +  EK        + F  +  AR  +
Sbjct: 101 TTNEKEKIEAKIMSVEDENIILENLENQEK------TTLKFSDIKKARTFI 145


>gi|292669519|ref|ZP_06602945.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292648842|gb|EFF66814.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 163

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 41  VQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGID 100
           V +  + E++  L+I+++++ G + + DC+ LS+ +  +LD E+ I   Y LEVSSPG+D
Sbjct: 40  VDVEYVRERDWYLRIYIDKE-GGIDIEDCQGLSERLEEMLDREDFIPDAYILEVSSPGLD 98

Query: 101 RPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           R + +  DF R  G  V   +      K++  G + G
Sbjct: 99  RVLRKPRDFEREQGKAVDVTLYAPFEGKKQWTGTLAG 135


>gi|237746614|ref|ZP_04577094.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229377965|gb|EEO28056.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 182

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 7/115 (6%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG---HVVA 118
           GN+T+ DCE++S+ +S +L VE++   + RLEVSSPG+DRP+ +  DF+R+ G   HV  
Sbjct: 62  GNITVDDCEKVSRQLSHVLTVEDV--DYDRLEVSSPGLDRPLKKWQDFVRFAGMEAHVRL 119

Query: 119 CEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            + V   G+++   G ++        LE E    +  + L   I+   +  ARL+
Sbjct: 120 RKPVTGMGNRKSFQGILLPPEGDELALEFEGNDSESSSVLHFTIT--DIDKARLV 172


>gi|146283632|ref|YP_001173785.1| hypothetical protein PST_3312 [Pseudomonas stutzeri A1501]
 gi|145571837|gb|ABP80943.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 182

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 68/117 (58%), Gaps = 2/117 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + ++   I  + + ++ LL+++++  +G + + DCE++S+ +S +LDVE
Sbjct: 38  LQALLAPVVEALGYQCWGIEFISQGRHSLLRVYIDHANG-ILIDDCEKVSRQLSGVLDVE 96

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           + I   Y LEVSSPG+DRP+     ++   G  V  ++      ++   G + G  E
Sbjct: 97  DPISVDYTLEVSSPGMDRPLFTIEQYVAHVGDQVKIKLRSPFEGRRNFQGLLRGVEE 153


>gi|146329510|ref|YP_001208969.1| hypothetical protein DNO_0031 [Dichelobacter nodosus VCS1703A]
 gi|166919100|sp|A5EWZ1|RIMP_DICNV RecName: Full=Ribosome maturation factor rimP
 gi|146232980|gb|ABQ13958.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
          Length = 155

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++P++E M F    +       N +L+I+V+  +G + + D   +++ ++PILDVE
Sbjct: 7   VTELLRPIVESMGFIWWGLEYHYNSMNSILRIYVDTQEGGIGIDDIVTITEQLNPILDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             I  +Y LEVSSPG+DR +   +   ++ G  V C +      K+K  G
Sbjct: 67  QPITTNYTLEVSSPGLDRILFTLAQCEQFIGATVHCRLRFPFEGKRKFQG 116


>gi|160902005|ref|YP_001567586.1| hypothetical protein Pmob_0529 [Petrotoga mobilis SJ95]
 gi|189040239|sp|A9BH33|RIMP_PETMO RecName: Full=Ribosome maturation factor rimP
 gi|160359649|gb|ABX31263.1| protein of unknown function DUF150 [Petrotoga mobilis SJ95]
          Length = 157

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 45/69 (65%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           KN +L++ +++ DG +++ DCE  S+A  P LD  ++ +  Y L VSSPG+DR +  K+D
Sbjct: 36  KNKILEVVIDKADGYVSIGDCERFSKAFDPWLDEIDLFDKSYELVVSSPGLDRKLRGKAD 95

Query: 109 FLRWNGHVV 117
           + R+ G + 
Sbjct: 96  YERFKGKLA 104


>gi|168180699|ref|ZP_02615363.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|182668569|gb|EDT80548.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
          Length = 153

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 69/122 (56%), Gaps = 2/122 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+AIS +
Sbjct: 6   LIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAISEL 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  +
Sbjct: 65  LDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSPIDKKKKYEGELVDFN 124

Query: 140 ET 141
           E 
Sbjct: 125 EN 126


>gi|226323232|ref|ZP_03798750.1| hypothetical protein COPCOM_01004 [Coprococcus comes ATCC 27758]
 gi|225208422|gb|EEG90776.1| hypothetical protein COPCOM_01004 [Coprococcus comes ATCC 27758]
          Length = 155

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 2/107 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P++E+  F    +  ++E  N  L+ ++++  G + + DCE +S+ +S ILD ++ I
Sbjct: 14  ILNPIVEKHGFDLWDVEYVKEGGNWYLRAYIDKP-GGIMVDDCEVVSRELSDILDEKDFI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +  Y LEVSSPG+ RP+ ++ DF R  G  V      +   +++ IG
Sbjct: 73  DEAYILEVSSPGLGRPLKKEKDFARSLGEEVEVRTYRAIDRQKEFIG 119


>gi|239626255|ref|ZP_04669286.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520485|gb|EEQ60351.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 155

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 3/107 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   + P++EE  F  V +  ++E     L+ +++++ G + + DCE +S+ +   LD E
Sbjct: 11  VERYLLPLMEEHHFELVDVEYVKEAGTWYLRAYIDKE-GGIAVDDCEVISRKLGDWLDKE 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           + I+  Y LEVSSPG+ RP+ ++ DF+R  G  V   +     DKQK
Sbjct: 70  DFIDESYILEVSSPGLGRPLKKEKDFIRSMGKDVDVRL-YRQIDKQK 115


>gi|119511040|ref|ZP_01630160.1| hypothetical protein N9414_09856 [Nodularia spumigena CCY9414]
 gi|119464291|gb|EAW45208.1| hypothetical protein N9414_09856 [Nodularia spumigena CCY9414]
          Length = 153

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 1/131 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV  E+    V I     ++  +L++ +     +  L DCE +S+A+   
Sbjct: 5   LVPQIIDLATPVAAELGLEVVGIVFHTNQRPPVLRVDIRNSQQDTGLNDCERMSRALEAS 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R ++   +F+ + G  V          +Q+ IG+++   
Sbjct: 65  LDAAEIIPDAYVLEVSSPGISRQLITDREFISFKGFPVIISTSQPYDGQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKR 150
           ET  +L ++ R
Sbjct: 125 ETTVYLNQKGR 135


>gi|255321999|ref|ZP_05363149.1| conserved hypothetical protein [Campylobacter showae RM3277]
 gi|255301103|gb|EET80370.1| conserved hypothetical protein [Campylobacter showae RM3277]
          Length = 142

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 6/99 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I++ +  G + L DCE++S+ +SPI DVE  + G Y LEVSSPG++R + + S F+ 
Sbjct: 28  IYRIYIAKP-GGVNLDDCEKVSRILSPIFDVEPPLTGDYVLEVSSPGLERKLEKPSHFIL 86

Query: 112 WNGHV--VACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
             G +  ++ E+    G+ +KL GKI+   +     E E
Sbjct: 87  SIGELAKISAEV---DGENKKLKGKILSADDEEISFESE 122


>gi|323485569|ref|ZP_08090914.1| hypothetical protein HMPREF9474_02665 [Clostridium symbiosum
           WAL-14163]
 gi|323692917|ref|ZP_08107140.1| ribosome maturation factor rimP [Clostridium symbiosum WAL-14673]
 gi|323401108|gb|EGA93461.1| hypothetical protein HMPREF9474_02665 [Clostridium symbiosum
           WAL-14163]
 gi|323503024|gb|EGB18863.1| ribosome maturation factor rimP [Clostridium symbiosum WAL-14673]
          Length = 155

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 2/112 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + + + PV+EE  F  V +  + E  +  L+ +++++ G + + DCE +S+ +   LD E
Sbjct: 11  VEAWLLPVLEEHHFELVDVEYVREVGVWYLRAYIDKE-GGIAVDDCEIISRKLGEWLDKE 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + I+  Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G +
Sbjct: 70  DFIDDSYILEVSSPGLGRPLKKEKDFVRSMGKDVEVRLYKPLNKQKEYTGAL 121


>gi|311068182|ref|YP_003973105.1| hypothetical protein BATR1942_06100 [Bacillus atrophaeus 1942]
 gi|310868699|gb|ADP32174.1| hypothetical protein BATR1942_06100 [Bacillus atrophaeus 1942]
          Length = 157

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 2/89 (2%)

Query: 30  QPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           QP+ + +    V I  ++E +N  L++F++ D+G + + +C ++S+ +S  LD  + I  
Sbjct: 14  QPIADNLQLELVDIEFVKEGQNWFLRVFIDSDNG-VDIEECAKVSELLSEKLDEADPISQ 72

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +Y LEVSSPG +RP+ +K+DF R  G  V
Sbjct: 73  NYFLEVSSPGAERPLKKKADFDRSLGKNV 101


>gi|291287255|ref|YP_003504071.1| hypothetical protein Dacet_1343 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884415|gb|ADD68115.1| protein of unknown function DUF150 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 169

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 24/147 (16%)

Query: 35  EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE-NIIE-GHYRL 92
           +M+ RS      E    +L+I ++++ G   + DC E S+AIS  LD E NI+    Y L
Sbjct: 38  DMTLRS------ERGGKVLRITIDKETG-PGIEDCTEASRAISAFLDGEDNIVPLDKYHL 90

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIGKI--MGTSETGFFLEK 147
           EVS+PG++RP+  + DF+R  G    C+I+  + D   ++   GKI  +  S+   ++EK
Sbjct: 91  EVSTPGLERPLRSQQDFVRQTGK--KCKIITVNKDESGRKSYTGKIDSVDDSKVTLYVEK 148

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E             IS D++  A L+V
Sbjct: 149 ESAA--------FEISLDNISKANLVV 167


>gi|225390158|ref|ZP_03759882.1| hypothetical protein CLOSTASPAR_03908 [Clostridium asparagiforme
           DSM 15981]
 gi|225043752|gb|EEG53998.1| hypothetical protein CLOSTASPAR_03908 [Clostridium asparagiforme
           DSM 15981]
          Length = 156

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 3/107 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + + + P++EE  F  V +  ++E     L+ +++++ G + + DCE +S+ +   LD E
Sbjct: 12  VEAYLLPLMEEHHFELVDVEYVKEAGTWYLRAYIDKE-GGIAVDDCEVISRKLGDWLDKE 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           + I   Y LEVSSPG+ RP+ ++ DF+R  G  V   +     DKQK
Sbjct: 71  DFISESYILEVSSPGLGRPLKKEKDFVRSLGKDVEVRL-YRMRDKQK 116


>gi|170754643|ref|YP_001781965.1| hypothetical protein CLD_2218 [Clostridium botulinum B1 str. Okra]
 gi|226701221|sp|B1II53|RIMP_CLOBK RecName: Full=Ribosome maturation factor rimP
 gi|169119855|gb|ACA43691.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
          Length = 153

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 69/122 (56%), Gaps = 2/122 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+A+S +
Sbjct: 6   LIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAVSEL 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  +
Sbjct: 65  LDDIDPIQESYYLEVSSPGIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGELVDFN 124

Query: 140 ET 141
           E 
Sbjct: 125 EN 126


>gi|332532409|ref|ZP_08408287.1| NusA-like protein [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038052|gb|EGI74499.1| NusA-like protein [Pseudoalteromonas haloplanktis ANT/505]
          Length = 151

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 66/120 (55%), Gaps = 2/120 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+ +++ P +E + F    +  ++  ++  L++++  +DG +++ +C + S+ IS I
Sbjct: 4   LEQDLVTMLTPAVEMLGFELHGLEFVQAGRHSTLRVYIAHEDG-ISVDNCADASRQISAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DR + ++  + +  G  V     L    ++   G ++  S
Sbjct: 63  LDVEDPITNEYDLEVSSPGVDRLLFKQDHYEQAQGEEVRVRTKLPQDGRRNFKGDLVAVS 122


>gi|225849797|ref|YP_002730031.1| hypothetical protein PERMA_0235 [Persephonella marina EX-H1]
 gi|259586177|sp|C0QTL6|RIMP_PERMH RecName: Full=Ribosome maturation factor rimP
 gi|225645648|gb|ACO03834.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 151

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 4/117 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++QP++EE   + V I  + E   +L+I++   +G  T+ DCE +S+ I  +LD+E+
Sbjct: 9   VKEMLQPLLEERGLKLVDIEYVTEGKPVLRIYIYNPEGT-TIEDCEWISRRIGALLDIED 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMGTSE 140
           +I   Y LEVSSPG++R +    ++  + G  +  +IVL    DK+ +I  ++   E
Sbjct: 68  LIPVSYTLEVSSPGLERKLKNVEEYDIFKGRDI--KIVLKEPVDKKNVIKGVLKGRE 122


>gi|153813000|ref|ZP_01965668.1| hypothetical protein RUMOBE_03407 [Ruminococcus obeum ATCC 29174]
 gi|149830947|gb|EDM86037.1| hypothetical protein RUMOBE_03407 [Ruminococcus obeum ATCC 29174]
          Length = 129

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 2/81 (2%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           +++ P++E   F  V +  ++E  N  L+ ++++  G +T+ DCE +S+A S  LD  + 
Sbjct: 40  ALLAPIVEGQGFELVDVEYVKEAGNWYLRGYIDKP-GGITVNDCEAVSRAFSDKLDENDF 98

Query: 86  IEGHYRLEVSSPGIDRPMVRK 106
           IE  Y +E+SSPG+DRP+ R+
Sbjct: 99  IEDSYIMEISSPGLDRPLKRR 119


>gi|300718579|ref|YP_003743382.1| hypothetical protein [Erwinia billingiae Eb661]
 gi|299064415|emb|CAX61535.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 195

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   +E + +  V I  +  +   L+I+++ ++G + + DC ++S  +S + DVE+
Sbjct: 53  LTELITAPVEALGYELVGIEFVRGRTSTLRIYIDSENG-INVDDCADVSHQVSAVFDVED 111

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++RP+   + + ++ G  V+  + ++  +++K  G I
Sbjct: 112 PITVAYNLEVSSPGLERPLFTAAHYAQFIGEEVSLVLRMAVQNRRKWQGII 162


>gi|295399849|ref|ZP_06809830.1| protein of unknown function DUF150 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111639|ref|YP_003989955.1| hypothetical protein GY4MC1_2648 [Geobacillus sp. Y4.1MC1]
 gi|294978252|gb|EFG53849.1| protein of unknown function DUF150 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216740|gb|ADP75344.1| protein of unknown function DUF150 [Geobacillus sp. Y4.1MC1]
          Length = 157

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++ +M    V I  ++E KN  L++F++ D+G + +  C  +S+ +S  LD  
Sbjct: 9   VEELVTPILADMDLELVDIEYVKEGKNWFLRVFIDSDEG-VDIEQCGTVSEKLSEKLDEV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ + +DF R  G  V  +       +++  G++ G      
Sbjct: 68  DPIPHNYFLEVSSPGAERPLKKPADFTRAIGKHVYIKTYEPIEGEKEFEGELTGFDGKIV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +  + +  K      I I ++ + SARL V
Sbjct: 128 SVTVKDKTRKKT----IDIPYEKVASARLAV 154


>gi|299823035|ref|ZP_07054921.1| protein of hypothetical function DUF150 [Listeria grayi DSM 20601]
 gi|299816564|gb|EFI83802.1| protein of hypothetical function DUF150 [Listeria grayi DSM 20601]
          Length = 155

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 5/104 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ EE+    V I+  +E KN  L++FV+R  G + + +C  +S+ +S  +D +
Sbjct: 8   VEAIVLPITEELGVELVDIAYEKEGKNWFLRVFVDRP-GGIDIDECAAVSEKLSEKMDEQ 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG---HVVACEIVLS 124
           + I  +Y LEVSSPG +RP+ ++ DF    G   HV + E + S
Sbjct: 67  DPISENYFLEVSSPGAERPLKKEKDFENAVGKYVHVTSYEPIDS 110


>gi|15614980|ref|NP_243283.1| hypothetical protein BH2417 [Bacillus halodurans C-125]
 gi|34223162|sp|Q9KA73|RIMP_BACHD RecName: Full=Ribosome maturation factor rimP
 gi|10175037|dbj|BAB06136.1| BH2417 [Bacillus halodurans C-125]
          Length = 156

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 81/153 (52%), Gaps = 7/153 (4%)

Query: 24  DISS-VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           DI++ +++P++E++      +   +E K+  L++F++ + G + L DC ++S+ +S  LD
Sbjct: 7   DITAELVKPILEQLDLELYDVEFKKEGKDWFLRVFIDSETG-VDLEDCGKVSERLSEKLD 65

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + IE  Y LEVSSPG +RP+ R+ D LR  G  V   +      ++ L G++      
Sbjct: 66  ETDPIEQAYFLEVSSPGAERPLKREKDLLRSIGKNVHVTLYEPIDGEKALEGELTEFDGE 125

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +E + +  K      + I +  + SARL V
Sbjct: 126 TLTIEIKIKTRKKT----VTIPYAKVASARLAV 154


>gi|187478886|ref|YP_786910.1| hypothetical protein BAV2396 [Bordetella avium 197N]
 gi|123514388|sp|Q2KXY5|RIMP_BORA1 RecName: Full=Ribosome maturation factor rimP
 gi|115423472|emb|CAJ50006.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 159

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 60/91 (65%), Gaps = 6/91 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++ ++R+DG + + DCE++S+ +S + +VENI   + RLEV SPG+DRP+  +++F R
Sbjct: 29  LLRVTIDREDG-VRIEDCEQVSRQLSRVYEVENI--DYKRLEVGSPGVDRPLRNEAEFRR 85

Query: 112 WNGHVVACEIVLSSG-DKQKLIGKIMGTSET 141
           + G  +  EI L    D +K+   I+  ++T
Sbjct: 86  FAGERI--EIKLREAVDGRKVFTGILQEADT 114


>gi|154148890|ref|YP_001407189.1| hypothetical protein CHAB381_1677 [Campylobacter hominis ATCC
           BAA-381]
 gi|259585737|sp|A7I3U8|RIMP_CAMHC RecName: Full=Ribosome maturation factor rimP
 gi|153804899|gb|ABS51906.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
          Length = 140

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 12/123 (9%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + ++++ + +G + L DCE LS+ +SPILDVE    G + LEVSSPG++R +   S+F  
Sbjct: 28  IYRVYITKKNG-VNLDDCEALSRLLSPILDVEPPTSGAFTLEVSSPGLERKLTTPSNFEN 86

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G +V  +I L +G  +K+ G+I+   +    L+  +  E       I+++F+ +  A+
Sbjct: 87  SLGELV--KITLKNG--EKISGEILSFKDEILKLKTAENNE-------ISVNFNEIKKAK 135

Query: 172 LIV 174
             +
Sbjct: 136 TYI 138


>gi|269137761|ref|YP_003294461.1| hypothetical protein ETAE_0403 [Edwardsiella tarda EIB202]
 gi|267983421|gb|ACY83250.1| conserved hypothetical protein [Edwardsiella tarda EIB202]
 gi|304557818|gb|ADM40482.1| hypothetical protein ETAF_0358 [Edwardsiella tarda FL6-60]
          Length = 140

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  ++  L+I+++ ++G +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRHSTLRIYIDSEEG-ITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             Y LEVSSPG+DRP+     +  +    V   + ++  +++K  G I
Sbjct: 60  VAYYLEVSSPGMDRPLFTAEHYTHFLNEEVTLVLRMAMQNRRKWQGII 107


>gi|186685821|ref|YP_001869017.1| hypothetical protein Npun_R5776 [Nostoc punctiforme PCC 73102]
 gi|226707751|sp|B2J958|RIMP_NOSP7 RecName: Full=Ribosome maturation factor rimP
 gi|186468273|gb|ACC84074.1| protein of unknown function DUF150 [Nostoc punctiforme PCC 73102]
          Length = 153

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 1/131 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV EE+    V +     +   +L++ +     +  L DCE +S+A+   
Sbjct: 5   LVPQIIDLATPVAEELGLEVVGVVFHTHQSPPVLRVDIRNPQQDTGLNDCERMSRALEAS 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+   Y LEVSSPGI R +V   +F+ + G  V          +Q+ IG+++   
Sbjct: 65  LDAAEIVPDTYVLEVSSPGISRQLVTDREFISFKGFPVIISTTPPYDGQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKR 150
           E   +L ++ R
Sbjct: 125 EITLYLNQKGR 135


>gi|15602626|ref|NP_245698.1| hypothetical protein PM0761 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721059|gb|AAK02845.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 177

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           + L ++++++++ G +T+ DC ++S+ +S ILDVE+ I   Y LEVSSPG+DR +     
Sbjct: 59  RYLTVRLYIDKE-GGVTVEDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRALFTLDQ 117

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + R+ G  +   + +   D++K  GK+
Sbjct: 118 YQRYIGQEIVVHLRIPVLDRRKWQGKL 144


>gi|187928208|ref|YP_001898695.1| hypothetical protein Rpic_1115 [Ralstonia pickettii 12J]
 gi|226696216|sp|B2UAA1|RIMP_RALPJ RecName: Full=Ribosome maturation factor rimP
 gi|187725098|gb|ACD26263.1| protein of unknown function DUF150 [Ralstonia pickettii 12J]
          Length = 162

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 5/119 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN
Sbjct: 3   LTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAENGVVIEDCEKVSHQLTRVFEVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETG 142
           +   + RLEVSSPG+DRP+   +DF R+ G      + L    ++   G I   T E G
Sbjct: 61  V--NYERLEVSSPGLDRPLRTLADFTRFAGLEAKVTLRLPVDGQKNFTGIIQAPTGEPG 117


>gi|168187911|ref|ZP_02622546.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
 gi|169294239|gb|EDS76372.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 154

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 75/127 (59%), Gaps = 4/127 (3%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I+ +I+P++EE+++    I  + E+N   L+I+++   G + L DCE++S+ +S ILD 
Sbjct: 10  EINKLIKPIVEELNYELYYIEYVVEQNENYLRIYIDSSKG-INLDDCEKVSRRVSEILDE 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI-VLSSGDKQKLIGKIMGTSET 141
           ++ I   Y LEVSSPGI+R +       ++  + +  ++  L  G ++   GK++  ++ 
Sbjct: 69  KDPISDSYYLEVSSPGIERVLYTDEHLHKYTNNQIIIKLGKLFEGSREHQ-GKLLSFNDD 127

Query: 142 GFFLEKE 148
              +E+E
Sbjct: 128 TVVIERE 134


>gi|300691723|ref|YP_003752718.1| hypothetical protein RPSI07_2078 [Ralstonia solanacearum PSI07]
 gi|299078783|emb|CBJ51443.1| conserved protein of unknown function [Ralstonia solanacearum
           PSI07]
          Length = 149

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVSSPG+DRP+   +DF R
Sbjct: 15  LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--NYERLEVSSPGLDRPLRTLTDFTR 72

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           + G      + L    ++   G +   +
Sbjct: 73  FAGQEAKVTLRLPVNGQKNFTGIVQAPA 100


>gi|194289951|ref|YP_002005858.1| hypothetical protein RALTA_A1852 [Cupriavidus taiwanensis LMG
           19424]
 gi|226696147|sp|B3R1E6|RIMP_CUPTR RecName: Full=Ribosome maturation factor rimP
 gi|193223786|emb|CAQ69793.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
          Length = 162

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 2/82 (2%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++++++ +  + + DCE++S+ ++ +  VEN+   + RLEVSSPG+DRP+ + +DF+R
Sbjct: 28  LLRVYIDQPETGIAIEDCEKVSRQLTHVFTVENV--DYERLEVSSPGLDRPLKKLADFVR 85

Query: 112 WNGHVVACEIVLSSGDKQKLIG 133
           + G      + L    ++   G
Sbjct: 86  FAGAEARVTLRLPVNGQKNFTG 107


>gi|322806688|emb|CBZ04257.1| clustered with transcription termination protein NusA [Clostridium
           botulinum H04402 065]
          Length = 153

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 69/122 (56%), Gaps = 2/122 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+A+S +
Sbjct: 6   LIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAVSEL 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  +
Sbjct: 65  LDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSPIDKKKKYEGELVDFN 124

Query: 140 ET 141
           E 
Sbjct: 125 EN 126


>gi|187778985|ref|ZP_02995458.1| hypothetical protein CLOSPO_02580 [Clostridium sporogenes ATCC
           15579]
 gi|187772610|gb|EDU36412.1| hypothetical protein CLOSPO_02580 [Clostridium sporogenes ATCC
           15579]
          Length = 153

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 70/123 (56%), Gaps = 2/123 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+++ +S+    I  ++E K   L+I+++ + G ++L  CE++S+A+S 
Sbjct: 5   SLIENLKKQIEPIVKGLSYDLYHIEFVKEGKENYLRIYIDSESG-VSLEGCEKVSRAVSE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSPIDKKKKYEGELVDF 123

Query: 139 SET 141
           +E 
Sbjct: 124 NEN 126


>gi|262037341|ref|ZP_06010806.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264]
 gi|261748598|gb|EEY35972.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264]
          Length = 178

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+++VE+ DG  +L DC ELS  I  + D  N+I   + LEVS+PG++R + ++ DF+R+
Sbjct: 53  LRVYVEKKDGTTSLDDCIELSSKIDGLAD--NLINEKFYLEVSTPGVERKLKKEKDFIRF 110

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +G  +          K+   GK+        FL  +  G+       + I    L  A L
Sbjct: 111 SGEKIKLHSKSQIEGKKTFEGKLEKFENDTIFLNDQNIGK------TVEIPLSKLKKANL 164

Query: 173 I 173
           I
Sbjct: 165 I 165


>gi|227518529|ref|ZP_03948578.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX0104]
 gi|227553055|ref|ZP_03983104.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           HH22]
 gi|229546054|ref|ZP_04434779.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX1322]
 gi|229550244|ref|ZP_04438969.1| protein of hypothetical function DUF150 [Enterococcus faecalis ATCC
           29200]
 gi|293383161|ref|ZP_06629078.1| UPF0090 protein [Enterococcus faecalis R712]
 gi|293387685|ref|ZP_06632230.1| UPF0090 protein [Enterococcus faecalis S613]
 gi|307268538|ref|ZP_07549911.1| UPF0090 family protein [Enterococcus faecalis TX4248]
 gi|307273443|ref|ZP_07554688.1| UPF0090 family protein [Enterococcus faecalis TX0855]
 gi|307277606|ref|ZP_07558698.1| UPF0090 family protein [Enterococcus faecalis TX2134]
 gi|307279084|ref|ZP_07560142.1| UPF0090 family protein [Enterococcus faecalis TX0860]
 gi|307288431|ref|ZP_07568419.1| UPF0090 family protein [Enterococcus faecalis TX0109]
 gi|307291250|ref|ZP_07571134.1| UPF0090 family protein [Enterococcus faecalis TX0411]
 gi|312899342|ref|ZP_07758675.1| UPF0090 family protein [Enterococcus faecalis TX0470]
 gi|312904019|ref|ZP_07763187.1| UPF0090 family protein [Enterococcus faecalis TX0635]
 gi|312907250|ref|ZP_07766241.1| UPF0090 family protein [Enterococcus faecalis DAPTO 512]
 gi|312909868|ref|ZP_07768716.1| SP14.3 family protein [Enterococcus faecalis DAPTO 516]
 gi|312952266|ref|ZP_07771141.1| UPF0090 family protein [Enterococcus faecalis TX0102]
 gi|227074011|gb|EEI11974.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX0104]
 gi|227177798|gb|EEI58770.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           HH22]
 gi|229304682|gb|EEN70678.1| protein of hypothetical function DUF150 [Enterococcus faecalis ATCC
           29200]
 gi|229308827|gb|EEN74814.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX1322]
 gi|291079500|gb|EFE16864.1| UPF0090 protein [Enterococcus faecalis R712]
 gi|291082874|gb|EFE19837.1| UPF0090 protein [Enterococcus faecalis S613]
 gi|306497481|gb|EFM67014.1| UPF0090 family protein [Enterococcus faecalis TX0411]
 gi|306500602|gb|EFM69931.1| UPF0090 family protein [Enterococcus faecalis TX0109]
 gi|306504209|gb|EFM73421.1| UPF0090 family protein [Enterococcus faecalis TX0860]
 gi|306505871|gb|EFM75049.1| UPF0090 family protein [Enterococcus faecalis TX2134]
 gi|306509970|gb|EFM78995.1| UPF0090 family protein [Enterococcus faecalis TX0855]
 gi|306515134|gb|EFM83676.1| UPF0090 family protein [Enterococcus faecalis TX4248]
 gi|310626278|gb|EFQ09561.1| UPF0090 family protein [Enterococcus faecalis DAPTO 512]
 gi|310629650|gb|EFQ12933.1| UPF0090 family protein [Enterococcus faecalis TX0102]
 gi|310632495|gb|EFQ15778.1| UPF0090 family protein [Enterococcus faecalis TX0635]
 gi|311289826|gb|EFQ68382.1| SP14.3 family protein [Enterococcus faecalis DAPTO 516]
 gi|311293493|gb|EFQ72049.1| UPF0090 family protein [Enterococcus faecalis TX0470]
 gi|315027495|gb|EFT39427.1| UPF0090 family protein [Enterococcus faecalis TX2137]
 gi|315030926|gb|EFT42858.1| UPF0090 family protein [Enterococcus faecalis TX4000]
 gi|315034082|gb|EFT46014.1| UPF0090 family protein [Enterococcus faecalis TX0017]
 gi|315036750|gb|EFT48682.1| UPF0090 family protein [Enterococcus faecalis TX0027]
 gi|315145576|gb|EFT89592.1| UPF0090 family protein [Enterococcus faecalis TX2141]
 gi|315147749|gb|EFT91765.1| UPF0090 family protein [Enterococcus faecalis TX4244]
 gi|315151450|gb|EFT95466.1| UPF0090 family protein [Enterococcus faecalis TX0012]
 gi|315153229|gb|EFT97245.1| UPF0090 family protein [Enterococcus faecalis TX0031]
 gi|315155992|gb|EFU00009.1| UPF0090 family protein [Enterococcus faecalis TX0043]
 gi|315157836|gb|EFU01853.1| UPF0090 family protein [Enterococcus faecalis TX0312]
 gi|315160338|gb|EFU04355.1| UPF0090 family protein [Enterococcus faecalis TX0645]
 gi|315166761|gb|EFU10778.1| UPF0090 family protein [Enterococcus faecalis TX1341]
 gi|315169948|gb|EFU13965.1| UPF0090 family protein [Enterococcus faecalis TX1342]
 gi|315174356|gb|EFU18373.1| UPF0090 family protein [Enterococcus faecalis TX1346]
 gi|315575676|gb|EFU87867.1| UPF0090 family protein [Enterococcus faecalis TX0309B]
 gi|315578366|gb|EFU90557.1| UPF0090 family protein [Enterococcus faecalis TX0630]
 gi|315579880|gb|EFU92071.1| UPF0090 family protein [Enterococcus faecalis TX0309A]
 gi|327534891|gb|AEA93725.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           OG1RF]
 gi|329577095|gb|EGG58568.1| hypothetical protein HMPREF9520_01115 [Enterococcus faecalis
           TX1467]
          Length = 185

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 67/109 (61%), Gaps = 5/109 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ P++EE +F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  LD  
Sbjct: 36  VTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEKLSEKLDAM 94

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQ 129
             + I   Y LEVSSPG +RP+ ++SD+ +  G  +   +  +  G+KQ
Sbjct: 95  DPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQ 143


>gi|302874659|ref|YP_003843292.1| hypothetical protein Clocel_1784 [Clostridium cellulovorans 743B]
 gi|307690727|ref|ZP_07633173.1| hypothetical protein Ccel74_21406 [Clostridium cellulovorans 743B]
 gi|302577516|gb|ADL51528.1| protein of unknown function DUF150 [Clostridium cellulovorans 743B]
          Length = 153

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I S +  VI+++ +    I  ++E     L+ ++E + G + L DCE++S+AIS I+DV
Sbjct: 9   EIESRMGSVIKDLGYDLYHIEYVVEGGENFLRFYIENEAG-IGLNDCEKVSRAISDIIDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           E+ I+ +Y LEVSSPG+ R + +   F R+ G  V  ++
Sbjct: 68  EDPIDENYYLEVSSPGVFRTLFKDEHFKRYIGEEVTVKL 106


>gi|29375839|ref|NP_814993.1| hypothetical protein EF1270 [Enterococcus faecalis V583]
 gi|255973019|ref|ZP_05423605.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255976058|ref|ZP_05426644.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256618849|ref|ZP_05475695.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256762267|ref|ZP_05502847.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256852912|ref|ZP_05558282.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256958758|ref|ZP_05562929.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256962136|ref|ZP_05566307.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256965335|ref|ZP_05569506.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|257078787|ref|ZP_05573148.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|257082769|ref|ZP_05577130.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|257085470|ref|ZP_05579831.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|257086617|ref|ZP_05580978.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|257089674|ref|ZP_05584035.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257415888|ref|ZP_05592882.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
 gi|257419090|ref|ZP_05596084.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257422842|ref|ZP_05599832.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|294780120|ref|ZP_06745493.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
 gi|300859867|ref|ZP_07105955.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|34222820|sp|Q835V2|RIMP_ENTFA RecName: Full=Ribosome maturation factor rimP
 gi|29343301|gb|AAO81063.1| conserved hypothetical protein [Enterococcus faecalis V583]
 gi|255964037|gb|EET96513.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255968930|gb|EET99552.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256598376|gb|EEU17552.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256683518|gb|EEU23213.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256711371|gb|EEU26409.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256949254|gb|EEU65886.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256952632|gb|EEU69264.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256955831|gb|EEU72463.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|256986817|gb|EEU74119.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|256990799|gb|EEU78101.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256993500|gb|EEU80802.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|256994647|gb|EEU81949.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|256998486|gb|EEU85006.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257157716|gb|EEU87676.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
 gi|257160918|gb|EEU90878.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257164666|gb|EEU94626.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|294452795|gb|EFG21224.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
 gi|300850685|gb|EFK78434.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|323480501|gb|ADX79940.1| conserved hypothetical protein [Enterococcus faecalis 62]
          Length = 157

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 67/109 (61%), Gaps = 5/109 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ P++EE +F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  LD  
Sbjct: 8   VTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEKLSEKLDAM 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQ 129
             + I   Y LEVSSPG +RP+ ++SD+ +  G  +   +  +  G+KQ
Sbjct: 67  DPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQ 115


>gi|315165483|gb|EFU09500.1| UPF0090 family protein [Enterococcus faecalis TX1302]
          Length = 185

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 67/109 (61%), Gaps = 5/109 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ P++EE +F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  LD  
Sbjct: 36  VTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEKLSEKLDAM 94

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQ 129
             + I   Y LEVSSPG +RP+ ++SD+ +  G  +   +  +  G+KQ
Sbjct: 95  DPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQ 143


>gi|34496915|ref|NP_901130.1| hypothetical protein CV_1460 [Chromobacterium violaceum ATCC 12472]
 gi|51316759|sp|Q7NY15|RIMP_CHRVO RecName: Full=Ribosome maturation factor rimP
 gi|34102771|gb|AAQ59135.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 141

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 67/120 (55%), Gaps = 11/120 (9%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
            ++F+++  G +T+ DC  +S   + +  VEN+   + RLEVSSPG+DRP+ +++DF+R+
Sbjct: 29  FRVFIDKP-GGITVEDCVLVSNHFTRLFMVENV--DYERLEVSSPGLDRPLKKEADFVRF 85

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +G +   +  +    ++K  G++ G  +    L+ + R         + I F ++  ARL
Sbjct: 86  SGQLAKIKTRMPIEQQKKFTGRLAGVEDGSVKLDVDGR--------IVEIPFANIDKARL 137


>gi|73541718|ref|YP_296238.1| hypothetical protein Reut_A2030 [Ralstonia eutropha JMP134]
 gi|91208397|sp|Q46ZN9|RIMP_RALEJ RecName: Full=Ribosome maturation factor rimP
 gi|72119131|gb|AAZ61394.1| Protein of unknown function DUF150 [Ralstonia eutropha JMP134]
          Length = 162

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 53/82 (64%), Gaps = 2/82 (2%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++++++ +  + + DCE++S+ ++ +L VEN+   + RLEVSSPG+DRP+ + +D++R
Sbjct: 28  LLRVYIDQPETGIVIEDCEKVSRQLTHVLTVENV--DYERLEVSSPGLDRPLKKLADYVR 85

Query: 112 WNGHVVACEIVLSSGDKQKLIG 133
           + G      + L    ++   G
Sbjct: 86  FAGAEARVTLRLPVNGQKNFTG 107


>gi|314933444|ref|ZP_07840809.1| conserved hypothetical protein [Staphylococcus caprae C87]
 gi|313653594|gb|EFS17351.1| conserved hypothetical protein [Staphylococcus caprae C87]
          Length = 155

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 18/157 (11%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++IQP+++++ F  V+I  ++E K+  L++ ++++ G + L DC   S+ IS  +D  
Sbjct: 8   VETIIQPILDDLKFELVEIEYVKEGKDRFLRVSIDKE-GGVDLNDCTLASEKISEAMDEN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-----SGDKQKLIGKIMGT 138
           + I   Y L+V+SPG +RP+ ++ DF     + V+  I +S      GDK+ L G +   
Sbjct: 67  DPIPEMYYLDVASPGAERPIKKEKDF----QNAVSQPIFVSLYAPIEGDKEWL-GILKSV 121

Query: 139 SETGFFLE-KEKRGEKDMNELQIAISFDSLLSARLIV 174
            E    +E KEK   K     +I I  + +  AR  V
Sbjct: 122 DEENIVMEVKEKSKTK-----EIEIPRNKIAKARYAV 153


>gi|259586217|sp|A4VPP2|RIMP_PSEU5 RecName: Full=Ribosome maturation factor rimP
 gi|327482027|gb|AEA85337.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 152

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 68/117 (58%), Gaps = 2/117 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + ++   I  + + ++ LL+++++  +G + + DCE++S+ +S +LDVE
Sbjct: 8   LQALLAPVVEALGYQCWGIEFISQGRHSLLRVYIDHANG-ILIDDCEKVSRQLSGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           + I   Y LEVSSPG+DRP+     ++   G  V  ++      ++   G + G  E
Sbjct: 67  DPISVDYTLEVSSPGMDRPLFTIEQYVAHVGDQVKIKLRSPFEGRRNFQGLLRGVEE 123


>gi|268608288|ref|ZP_06142015.1| hypothetical protein RflaF_02144 [Ruminococcus flavefaciens FD-1]
          Length = 157

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISP 78
           G    +  +I+P+ +E+ +    +  ++E  +  L+IF+++D+G +++ DCE  +  IS 
Sbjct: 8   GTEQKVYDLIKPITDELGYYLWDVCYVKEGAMWYLRIFIDQDEG-ISIDDCERATAPISD 66

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD  + +   Y LEV S G++R +V++  F    G  V  +   +   ++++  +++G 
Sbjct: 67  ILDEADPVPQQYMLEVGSAGLERELVKEEHFEVCKGDTVTLKFFRAVDGEKEIRAELVGA 126

Query: 139 SETGFFLEKEKRGEK 153
            + G  + KE   EK
Sbjct: 127 DKDGITVIKEDGTEK 141


>gi|290473445|ref|YP_003466312.1| YhbC-like protein (fragment) [Xenorhabdus bovienii SS-2004]
 gi|289172745|emb|CBJ79516.1| YhbC-like protein (fragment) [Xenorhabdus bovienii SS-2004]
          Length = 140

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 65/108 (60%), Gaps = 1/108 (0%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V +  +  +   L+++++ ++G +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVEALGFELVGLEFIRARVSTLRVYIDSEEG-ITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             Y LE+SSPG++RP+ +   + R+ G  V+  + ++  ++++  G I
Sbjct: 60  VLYNLEISSPGLERPLFKAEHYQRFMGEEVSLVLRMAMQNRRRWQGII 107


>gi|259503124|ref|ZP_05746026.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259168990|gb|EEW53485.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 171

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 14/156 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-V 82
           ++ ++ P+++E  F    I  ++E K+  L++++++D G +TL DC  +S  +S  LD V
Sbjct: 22  VTDLVTPILDEHHFYLYDIEFVKEGKSWYLRVYIDKD-GGITLNDCAAVSDQLSEALDNV 80

Query: 83  E-NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE- 140
           E + I   Y LEVSSPG +RP+  + D+ R   H +   +      K+   G ++  S  
Sbjct: 81  EPDPIPQAYFLEVSSPGAERPLKNEDDYQRAVNHYIHVSLYQQLAGKKVYEGTLVELSAK 140

Query: 141 --TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             T  F++K +         Q+ I    +  ARL +
Sbjct: 141 EMTLNFMDKTRHR-------QVVIDRSKVAQARLAI 169


>gi|323489586|ref|ZP_08094813.1| hypothetical protein GPDM_09575 [Planococcus donghaensis MPA1U2]
 gi|323396717|gb|EGA89536.1| hypothetical protein GPDM_09575 [Planococcus donghaensis MPA1U2]
          Length = 161

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  + QP+  E+    V +  L+E ++  L+++V+  +  + +  C  +S+ +S ILD  
Sbjct: 8   IEQIAQPITSELGLELVDVEFLKEGRDWFLRVYVDNPEAPIDIEQCALVSEKLSGILDEL 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + IE +Y LEVSSPG +RP+ ++ DF +  G  +
Sbjct: 68  DPIEQNYFLEVSSPGAERPLKKEKDFEKAIGKFI 101


>gi|160880909|ref|YP_001559877.1| hypothetical protein Cphy_2778 [Clostridium phytofermentans ISDg]
 gi|226701647|sp|A9KNW8|RIMP_CLOPH RecName: Full=Ribosome maturation factor rimP
 gi|160429575|gb|ABX43138.1| protein of unknown function DUF150 [Clostridium phytofermentans
           ISDg]
          Length = 155

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 67/119 (56%), Gaps = 14/119 (11%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
            ++ P++EE +F  V +  ++E  N  L+ +++++ G +T+ DCE +S+  S +LD ++ 
Sbjct: 13  QLLTPIMEENNFELVDVEYVKEVGNWYLRAYIDKE-GGITVDDCEVVSRRFSDLLDEKDF 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI------------VLSSGDKQKLI 132
           I   Y LEVSSPG+ R + +  DF R  G  V  ++            +L+  D++KLI
Sbjct: 72  IPDAYILEVSSPGLGRQLKKDKDFKRSLGEEVEIKLYKAINKQKDFEGILTDFDQEKLI 130


>gi|325265379|ref|ZP_08132103.1| hypothetical protein HMPREF0240_04394 [Clostridium sp. D5]
 gi|324029380|gb|EGB90671.1| hypothetical protein HMPREF0240_04394 [Clostridium sp. D5]
          Length = 155

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 62/107 (57%), Gaps = 2/107 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P++  + F  V +  ++E     L+ ++++  G +T+ DCE +S+  S ILD ++ I
Sbjct: 14  LLEPIVTGVGFELVDVEYVKEAGTWYLRAYIDKP-GGITVDDCEAVSRKFSDILDEKDYI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           E  Y  EVSSPG+ RP+ ++ D+ R  G  V  +   +   +++ +G
Sbjct: 73  EDTYIFEVSSPGLGRPLKKEKDYRRSLGEEVEIKTYRAIDRQKEFVG 119


>gi|242373556|ref|ZP_04819130.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           M23864:W1]
 gi|242348919|gb|EES40521.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           M23864:W1]
          Length = 178

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 8/152 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + S+IQP+++++ F  V+I  ++E K+  L+I ++++ G + L DC   S+ IS  +D  
Sbjct: 31  VESIIQPILDDLKFELVEIEYVKEGKDRFLRISIDKE-GGVDLNDCTLASEKISEAMDEN 89

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y L+V+SPG +RP+ +  DF       V   +      +++ +G +    +   
Sbjct: 90  DPIPEMYYLDVASPGAERPIKKDKDFHNAVTQPVFISLYAPIEGEKEWLGILQSVDDDNI 149

Query: 144 FLE-KEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E KEK   K     QI I  + +  AR  V
Sbjct: 150 VMEVKEKSKTK-----QIEIPRNKIAKARHAV 176


>gi|330685687|gb|EGG97328.1| hypothetical protein SEVCU121_1926 [Staphylococcus epidermidis
           VCU121]
          Length = 155

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 8/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +  +IQPV++E+SF  V+I  ++E K+  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   IAEQVEPIIQPVLDELSFELVEIEYVKEGKDHFLRISIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+  +        H +   + +   ++++ +G +    
Sbjct: 63  MDANDPIPEMYYLDVASPGAERPIKNEKALKNAVSHPIFISLYVPIENEKEWLGILKEVK 122

Query: 140 ETGFFLE-KEKRGEKDMNELQIAISFDSLLSAR 171
           E    +E KEK   K      I I  + +  AR
Sbjct: 123 EDIILIEVKEKSKTK-----TIEIPRNKIAKAR 150


>gi|298490030|ref|YP_003720207.1| hypothetical protein Aazo_0596 ['Nostoc azollae' 0708]
 gi|298231948|gb|ADI63084.1| protein of unknown function DUF150 ['Nostoc azollae' 0708]
          Length = 153

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%)

Query: 31  PVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           PV E++    V I L   ++  +L++ +     + +L DCE +S+ +   LD   II   
Sbjct: 15  PVAEQLGLEVVGIVLHTNQRPPVLRVDIRNTQQDTSLDDCERMSRVLEASLDAAEIIPDA 74

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LEVSSPGI R ++   +F+ + G  V          +Q+  G+++   ET  +L ++ 
Sbjct: 75  YVLEVSSPGISRQLITDREFISFKGFPVVISTSQPYDGQQEWTGQLIRRGETKIYLNQKG 134

Query: 150 R 150
           R
Sbjct: 135 R 135


>gi|163815207|ref|ZP_02206584.1| hypothetical protein COPEUT_01365 [Coprococcus eutactus ATCC 27759]
 gi|158449402|gb|EDP26397.1| hypothetical protein COPEUT_01365 [Coprococcus eutactus ATCC 27759]
          Length = 129

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 6/123 (4%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E  +  L+++ +++ G +T+ DCE +++A+  +LD E+ I   Y LEVSSPG+ RP+ ++
Sbjct: 8   EGSDYYLRVYADKE-GGITINDCEIVNRALGDLLDQEDYISDAYILEVSSPGLTRPLKKE 66

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE-----KDMNELQIA 161
           +DF R  G VV  +  +     ++  G +    +    +E E   E     KD++ +++A
Sbjct: 67  NDFKRSIGKVVEIKTFVKINGAKEFEGVLKAYDDATVTIEFEDETEVTISRKDISMIRLA 126

Query: 162 ISF 164
             +
Sbjct: 127 FIY 129


>gi|114777566|ref|ZP_01452547.1| hypothetical protein SPV1_07661 [Mariprofundus ferrooxydans PV-1]
 gi|114552037|gb|EAU54554.1| hypothetical protein SPV1_07661 [Mariprofundus ferrooxydans PV-1]
          Length = 158

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 74/123 (60%), Gaps = 7/123 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I S+++P+++E+    ++ISL     N LL++ V++  G +     E +S+ ++  LDVE
Sbjct: 5   IESLLRPIVDELGVEIIKISLGGGGHNPLLKVVVDKA-GGVDSGMLERISRGLALQLDVE 63

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TSETG 142
           ++I+  +RLEV++PG+D P+   +DF R+ G     +++ + G  Q+  G+ +G  S+  
Sbjct: 64  DLIKSAFRLEVTTPGLDWPLTTNADFERYRGE--WLKVMFADGSSQE--GRNLGPVSDHA 119

Query: 143 FFL 145
           F L
Sbjct: 120 FML 122


>gi|224367579|ref|YP_002601742.1| hypothetical protein HRM2_04640 [Desulfobacterium autotrophicum
           HRM2]
 gi|259585763|sp|C0QHM0|RIMP_DESAH RecName: Full=Ribosome maturation factor rimP
 gi|223690295|gb|ACN13578.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 155

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 2/110 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I S+ +P+     F  V +  + ++  ++++I++++  G +TL DC  +++ +  I+DVE
Sbjct: 15  IESIAEPLCIAEGFELVHVECVSDQGGMIVRIYLDKP-GGITLDDCVHMTRHLGDIIDVE 73

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
                 YRLE+SSPG  RP+ + +DF R+ G  V  E V   G + K  G
Sbjct: 74  LEEISAYRLEISSPGAKRPLKKLADFERFLGSRVKVEAVEPIGGRLKFTG 123


>gi|313638096|gb|EFS03363.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
          Length = 155

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ +E+    V I+  +E  N  L+IF+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVAPITDELHLELVDIAFEKEGPNWFLRIFIDKD-GGVDIDECAAVSEKVSEKMDES 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + I  +Y LEVSSPG +RP+ ++ DF+
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDFV 93


>gi|238918422|ref|YP_002931936.1| hypothetical protein NT01EI_0465 [Edwardsiella ictaluri 93-146]
 gi|238867990|gb|ACR67701.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 140

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  ++  L+I+++ ++G +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRHSTLRIYIDSEEG-ITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             Y LEVSSPG++RP+     + R+    V   + ++  +++K  G I
Sbjct: 60  VAYYLEVSSPGMERPLFIAEHYTRFLNEEVTLVLRMAMQNRRKWQGII 107


>gi|332968910|gb|EGK07957.1| protein of hypothetical function DUF150 [Kingella kingae ATCC
           23330]
          Length = 145

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 63/112 (56%), Gaps = 5/112 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +++   +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  ++ +  VE
Sbjct: 2   DIQNILDTTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLNRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           ++   +  LE+SSPG+DRP+ + SDF+R+ G     +  L    ++  IG+I
Sbjct: 59  DV--DYKNLEISSPGLDRPLKKASDFVRFAGSQAKIKTRLPVDGQKNFIGRI 108


>gi|285017806|ref|YP_003375517.1| hypothetical protein XALc_1014 [Xanthomonas albilineans GPE PC73]
 gi|283473024|emb|CBA15529.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 201

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 6/121 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV-----ERDDGNMTLRDCEELSQA 75
           A +I++++ P ++ +    +    L       L++++     E+ +  + + DCE +S+ 
Sbjct: 5   ANEIANLLGPTVDALGLELLGAEYLPASGGATLRLYIDVPLGEQPERMVNIDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R         + L    +++L G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTAEQFARHRDESAKVVLKLPQQGRRRLQGRI 124

Query: 136 M 136
           +
Sbjct: 125 V 125


>gi|313633404|gb|EFS00240.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
          Length = 155

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ +E+    V I+  +E  N  L+IF+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVAPITDELHLELVDIAFEKEGPNWFLRIFIDKD-GGVDIDECAAVSEKVSEKMDES 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + I  +Y LEVSSPG +RP+ ++ DF+
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDFV 93


>gi|16800426|ref|NP_470694.1| hypothetical protein lin1358 [Listeria innocua Clip11262]
 gi|34222948|sp|Q92C33|RIMP_LISIN RecName: Full=Ribosome maturation factor rimP
 gi|16413831|emb|CAC96589.1| lin1358 [Listeria innocua Clip11262]
 gi|313619130|gb|EFR90920.1| conserved hypothetical protein [Listeria innocua FSL S4-378]
          Length = 155

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ +E+    V I+  +E  N  L+IF+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKD-GGVDIDECAAVSEKVSEKMDES 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I  +Y LEVSSPG +RP+ ++ DF    G  V
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDFENAVGKYV 100


>gi|254468932|ref|ZP_05082338.1| hypothetical protein KB13_1157 [beta proteobacterium KB13]
 gi|207087742|gb|EDZ65025.1| hypothetical protein KB13_1157 [beta proteobacterium KB13]
          Length = 158

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 80/145 (55%), Gaps = 7/145 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM-TLRDCEELSQAISP 78
           G   D+  +I   I+ + +  V+       + L++IF+  D+GN+ ++ DC ++S  ++ 
Sbjct: 12  GFVMDLEKIISESIQNIGYELVECEH-NHNSGLIRIFI--DNGNLISVDDCVKVSNHLNR 68

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +L VE +     RLEVSSPG+DR +++ +D+ R+ G  +  ++     +++K  GK++ +
Sbjct: 69  VLSVE-LDYDFSRLEVSSPGVDRKLIKLADYKRFEGEKIKIKLYSPINNQKKFDGKLIAS 127

Query: 139 SET--GFFLEKEKRGEKDMNELQIA 161
            E      L  EK  E   +E+Q+A
Sbjct: 128 DEKKIKILLSDEKILEVPFDEIQMA 152


>gi|315302975|ref|ZP_07873695.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596]
 gi|313628655|gb|EFR97068.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596]
          Length = 155

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ +E+    V I+  +E  N  L+IF+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVAPITDELHLELVDIAFEKEGPNWFLRIFIDKD-GGVDIDECAAVSEKVSEKMDES 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + I  +Y LEVSSPG +RP+ ++ DF+
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDFV 93


>gi|119477403|ref|ZP_01617594.1| hypothetical protein GP2143_00477 [marine gamma proteobacterium
           HTCC2143]
 gi|119449329|gb|EAW30568.1| hypothetical protein GP2143_00477 [marine gamma proteobacterium
           HTCC2143]
          Length = 151

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 63/112 (56%), Gaps = 2/112 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ PV E + ++   +  L   K  +++I+++  DG + + DC ++S+ +  + DVE
Sbjct: 8   LADLVAPVAEALGYQLWGVEYLSHGKQSVVRIYIDSPDG-IDVDDCAKVSRQVGSVFDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + I G Y LEVSSPG+DRP+     +  + G  V  ++  +   ++   G++
Sbjct: 67  DPIMGEYTLEVSSPGMDRPLFALEQYRPYVGEQVKIKLRTAFDGRRNFSGRM 118


>gi|313673262|ref|YP_004051373.1| hypothetical protein Calni_1302 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940018|gb|ADR19210.1| protein of unknown function DUF150 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 157

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+IF++++  N+TL DC   S+ IS  LD E++I   Y LEVSSPG++RP+    D+ ++
Sbjct: 41  LRIFLDKE--NLTLEDCANFSKEISKWLDKEDLIPHKYNLEVSSPGLNRPLRNIDDYKKY 98

Query: 113 NGHVVACEIVLS-SGDKQKLIGKIMGT 138
            G     E+    S  ++   G I G 
Sbjct: 99  IGRKCKVELFKKDSSGRKNYTGYIKGV 125


>gi|116872752|ref|YP_849533.1| hypothetical protein lwe1336 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123460990|sp|A0AIC2|RIMP_LISW6 RecName: Full=Ribosome maturation factor rimP
 gi|116741630|emb|CAK20754.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 155

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 2/86 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++++P+  E+    V I+  +E  N  L+IF+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVEPITNELQLELVDIAFEKEGPNWFLRIFIDKD-GGVDIDECAAVSEKVSEKMDES 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I  +Y LEVSSPG +RP+ ++ DF
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDF 92


>gi|116624261|ref|YP_826417.1| hypothetical protein Acid_5179 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227423|gb|ABJ86132.1| protein of unknown function DUF150 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 174

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           L++I +++ +G +T  DC+ +S  +  IL+ E+ I GHY LEVSSPG++R +++  D+ R
Sbjct: 58  LVRISIDKPEG-VTHADCQTVSDKVGEILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQR 116

Query: 112 WNGH 115
           ++G 
Sbjct: 117 FHGQ 120


>gi|56963997|ref|YP_175728.1| hypothetical protein ABC2232 [Bacillus clausii KSM-K16]
 gi|81365999|sp|Q5WFT8|RIMP_BACSK RecName: Full=Ribosome maturation factor rimP
 gi|56910240|dbj|BAD64767.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 156

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 75/149 (50%), Gaps = 6/149 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + +P++ E+    V++   +E  N  L++F++ D G + L DCE +S+ +S +LD  
Sbjct: 9   VEQLAEPIVRELHLELVEVEYKKEGPNWYLRVFIDADRG-VNLDDCEAVSEKLSEVLDEV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+  Y LEVSSPG +RP+ +++D  +  G  V          ++   G ++   +   
Sbjct: 68  DPIKEAYFLEVSSPGAERPLKKEADVKKAVGKGVYVTTYEPIDGQKAFEGVLVSFEDATL 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +E    G+     +   + +  + +ARL
Sbjct: 128 VIE----GKNKTRTVTYTVPYAKVANARL 152


>gi|46907547|ref|YP_013936.1| hypothetical protein LMOf2365_1338 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47093945|ref|ZP_00231682.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|226223922|ref|YP_002758029.1| hypothetical protein Lm4b_01329 [Listeria monocytogenes Clip81459]
 gi|254824620|ref|ZP_05229621.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254852629|ref|ZP_05241977.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254932364|ref|ZP_05265723.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|254993852|ref|ZP_05276042.1| hypothetical protein LmonocytoFSL_13365 [Listeria monocytogenes FSL
           J2-064]
 gi|255521786|ref|ZP_05389023.1| hypothetical protein LmonocFSL_11262 [Listeria monocytogenes FSL
           J1-175]
 gi|300765439|ref|ZP_07075421.1| hypothetical protein LMHG_11499 [Listeria monocytogenes FSL N1-017]
 gi|51316675|sp|Q720A1|RIMP_LISMF RecName: Full=Ribosome maturation factor rimP
 gi|259585784|sp|C1L2M7|RIMP_LISMC RecName: Full=Ribosome maturation factor rimP
 gi|46880815|gb|AAT04113.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017683|gb|EAL08479.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|225876384|emb|CAS05093.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605944|gb|EEW18552.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293583920|gb|EFF95952.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293593858|gb|EFG01619.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300513876|gb|EFK40941.1| hypothetical protein LMHG_11499 [Listeria monocytogenes FSL N1-017]
 gi|328468604|gb|EGF39604.1| ribosome maturation protein RimP [Listeria monocytogenes 1816]
 gi|328475043|gb|EGF45831.1| ribosome maturation protein RimP [Listeria monocytogenes 220]
 gi|332311764|gb|EGJ24859.1| Ribosome maturation factor rimP [Listeria monocytogenes str. Scott
           A]
          Length = 155

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 2/86 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ +E+    V I+  +E  N  L+IF+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVTPITDELQLELVDIAFEKEGPNWFLRIFIDKD-GGVDIDECAAVSEKVSEKMDEN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I  +Y LEVSSPG +RP+ ++ DF
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDF 92


>gi|313623921|gb|EFR94029.1| conserved hypothetical protein [Listeria innocua FSL J1-023]
          Length = 155

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ +E+    V I+  +E  N  L+IF+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKD-GGVDIDECAAVSEKVSEKMDES 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I  +Y LEVSSPG +RP+ ++ DF    G  V
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDFENAVGKYV 100


>gi|169350437|ref|ZP_02867375.1| hypothetical protein CLOSPI_01205 [Clostridium spiroforme DSM 1552]
 gi|169292757|gb|EDS74890.1| hypothetical protein CLOSPI_01205 [Clostridium spiroforme DSM 1552]
          Length = 155

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I  +I+P+++        I  +++K    L+IFVE+++G + +  C  +S+ IS
Sbjct: 1   MELLNKIKEMIEPILQSNDVYLDDIEYVQDKGEWYLRIFVEKNEGFLDMDTCVAVSEQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPM 103
             LD E+ I+G Y LEVSSPG+++P+
Sbjct: 61  QKLDEEDPIKGEYYLEVSSPGVEKPL 86


>gi|113868283|ref|YP_726772.1| hypothetical protein H16_A2308 [Ralstonia eutropha H16]
 gi|123032887|sp|Q0K9B7|RIMP_RALEH RecName: Full=Ribosome maturation factor rimP
 gi|113527059|emb|CAJ93404.1| conserved hypothetical protein [Ralstonia eutropha H16]
          Length = 162

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 52/82 (63%), Gaps = 2/82 (2%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++++++ +  + + DCE++S+ ++ +  VEN+   + RLEVSSPG+DRP+ + +D++R
Sbjct: 28  LLRVYIDQPETGIAIEDCEKVSRQLTHVFTVENV--DYERLEVSSPGLDRPLKKLADYVR 85

Query: 112 WNGHVVACEIVLSSGDKQKLIG 133
           + G      + L    ++   G
Sbjct: 86  FAGEEARVTLRLPVNGQKNFTG 107


>gi|16803361|ref|NP_464846.1| hypothetical protein lmo1321 [Listeria monocytogenes EGD-e]
 gi|224499903|ref|ZP_03668252.1| hypothetical protein LmonF1_09559 [Listeria monocytogenes Finland
           1988]
 gi|224501736|ref|ZP_03670043.1| hypothetical protein LmonFR_04337 [Listeria monocytogenes FSL
           R2-561]
 gi|254828681|ref|ZP_05233368.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254829922|ref|ZP_05234577.1| hypothetical protein Lmon1_01135 [Listeria monocytogenes 10403S]
 gi|254898514|ref|ZP_05258438.1| hypothetical protein LmonJ_01825 [Listeria monocytogenes J0161]
 gi|254911995|ref|ZP_05262007.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936322|ref|ZP_05268019.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284801706|ref|YP_003413571.1| hypothetical protein LM5578_1460 [Listeria monocytogenes 08-5578]
 gi|284994848|ref|YP_003416616.1| hypothetical protein LM5923_1413 [Listeria monocytogenes 08-5923]
 gi|315282174|ref|ZP_07870639.1| conserved hypothetical protein [Listeria marthii FSL S4-120]
 gi|34222940|sp|Q8Y7G0|RIMP_LISMO RecName: Full=Ribosome maturation factor rimP
 gi|16410737|emb|CAC99399.1| lmo1321 [Listeria monocytogenes EGD-e]
 gi|258601085|gb|EEW14410.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258608912|gb|EEW21520.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284057268|gb|ADB68209.1| hypothetical protein LM5578_1460 [Listeria monocytogenes 08-5578]
 gi|284060315|gb|ADB71254.1| hypothetical protein LM5923_1413 [Listeria monocytogenes 08-5923]
 gi|293589959|gb|EFF98293.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|313614178|gb|EFR87857.1| conserved hypothetical protein [Listeria marthii FSL S4-120]
          Length = 155

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 2/86 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ +E+    V I+  +E  N  L+IF+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKD-GGVDIDECAAVSEKVSEKMDEN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I  +Y LEVSSPG +RP+ ++ DF
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDF 92


>gi|269127539|ref|YP_003300909.1| hypothetical protein Tcur_3333 [Thermomonospora curvata DSM 43183]
 gi|268312497|gb|ACY98871.1| protein of unknown function DUF150 [Thermomonospora curvata DSM
           43183]
          Length = 205

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 10/121 (8%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           +  L++I V+  DG +TL D   LSQA+S  LD  +++ E  Y LEV+SPG+DRP+    
Sbjct: 64  RRRLVRIVVD-ADGGVTLEDTATLSQAVSAALDDTDVMGEAPYVLEVTSPGVDRPLTEPR 122

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR----GEKDMNELQIAIS 163
            + R  G +V   +     D  ++ G+++   E    LE   R    G  ++   ++ + 
Sbjct: 123 HWRRATGRLVRAALA----DGGQVEGRVVAADEEAVVLEVAGRRRRFGHGELGRGRVQVE 178

Query: 164 F 164
           F
Sbjct: 179 F 179


>gi|94971245|ref|YP_593293.1| hypothetical protein Acid345_4219 [Candidatus Koribacter versatilis
           Ellin345]
 gi|259585655|sp|Q1IIT1|RIMP_ACIBL RecName: Full=Ribosome maturation factor rimP
 gi|94553295|gb|ABF43219.1| protein of unknown function DUF150 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 169

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 2/70 (2%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG-HYRLEVSSPGIDRPMVRKS 107
           K  +L+I +++ +G +T  DC  +S  +S ILDVE+++ G  Y LEVSSPG+DR + + +
Sbjct: 32  KARMLRITIDKPEG-VTHDDCSHVSNEVSTILDVEDVVPGASYTLEVSSPGLDRKISKPA 90

Query: 108 DFLRWNGHVV 117
           DF R+ G +V
Sbjct: 91  DFERFTGSLV 100


>gi|82702987|ref|YP_412553.1| hypothetical protein Nmul_A1866 [Nitrosospira multiformis ATCC
           25196]
 gi|91208392|sp|Q2Y7W0|RIMP_NITMU RecName: Full=Ribosome maturation factor rimP
 gi|82411052|gb|ABB75161.1| Protein of unknown function DUF150 [Nitrosospira multiformis ATCC
           25196]
          Length = 142

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 63/110 (57%), Gaps = 4/110 (3%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++P +  + +  V +        LL+IF+++  G + + DC  +S  +S  L VE
Sbjct: 2   DLYELLEPTLAGLGYELVDLER-SPGGKLLRIFIDKP-GGVNVDDCVTVSNHLSRFLAVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           N+   + RLEVSSPG+DRP+ + +DF+R+ G  V   + ++   ++  +G
Sbjct: 60  NV--DYDRLEVSSPGLDRPLKKTADFIRFAGESVKLRLRVALQGQRNFVG 107


>gi|51892656|ref|YP_075347.1| hypothetical protein STH1518 [Symbiobacterium thermophilum IAM
           14863]
 gi|81388945|sp|Q67P90|RIMP_SYMTH RecName: Full=Ribosome maturation factor rimP
 gi|51856345|dbj|BAD40503.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 160

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 13/155 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +  P    +    V + L++E     L+++++++ G +   DCE LS+ +   LD E
Sbjct: 12  VEELAAPHAAALGLELVGVELVKEGAYRYLRVYIDKE-GGVGFDDCEALSRVVDAQLD-E 69

Query: 84  NIIEGHYRL-EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE-- 140
            +    Y   EVSSPG+DRP+ R++DF R+ GH V          ++  +G++ G  +  
Sbjct: 70  ILPNPPYDFFEVSSPGLDRPLKREADFARYVGHKVVVTTYAPVDGQKSFVGELQGLVDGR 129

Query: 141 -TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T    E + RG+       IA+    + SARL V
Sbjct: 130 VTLTLTEGKGRGQ------TIALDRKQVASARLYV 158


>gi|227875843|ref|ZP_03993969.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|269977479|ref|ZP_06184451.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
 gi|306819124|ref|ZP_07452838.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307700024|ref|ZP_07637073.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
 gi|227843591|gb|EEJ53774.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|269934395|gb|EEZ90957.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
 gi|304648100|gb|EFM45411.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307614785|gb|EFN94005.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
          Length = 178

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 16/161 (9%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVE--RDDGNMTLRDCEELS 73
           G++ +A ++S ++ P + ++     ++ +   KN   ++IF++     G +     E  S
Sbjct: 9   GNVDIAAEVSQLLAPTVTQLGLFLEKVCVKGSKNSRQVEIFLDLPAGSGEIGFERLEAAS 68

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           Q IS ++D  + +EG Y LEVS+ G +  +     F+R  G     EI ++    QK +G
Sbjct: 69  QEISRLMDSADPVEGKYNLEVSTLGAEHALDNPRLFVRAVGR--DAEITVAG---QKRVG 123

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +I+   ET F  E++ +        Q  ISF +L SAR +V
Sbjct: 124 RILAAGETDFTWEEDGK--------QETISFSALQSARTVV 156


>gi|307155147|ref|YP_003890531.1| hypothetical protein Cyan7822_5377 [Cyanothece sp. PCC 7822]
 gi|306985375|gb|ADN17256.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7822]
          Length = 153

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P+ E++    V++     K   +L++ +     + +L DCE++S+++   LD   +I G 
Sbjct: 15  PIAEQLGLEIVEVVFQTNKRPPVLRVDIRNKSSDTSLNDCEQMSRSLEANLDATELIPGS 74

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LE+SSPGI R +    +F+ + G  +  +      ++++  GK+ G  E   +L K+ 
Sbjct: 75  YVLEISSPGISRQLNSDREFIVFKGFDIIVKTDTPFENQKEWRGKLQGRDEQAVYLNKKG 134

Query: 150 R 150
           R
Sbjct: 135 R 135


>gi|310778371|ref|YP_003966704.1| protein of unknown function DUF150 [Ilyobacter polytropus DSM 2926]
 gi|309747694|gb|ADO82356.1| protein of unknown function DUF150 [Ilyobacter polytropus DSM 2926]
          Length = 158

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  +  PV  E     V I  L++     +++++E+ D  +TL DC  +S  I    DV+
Sbjct: 13  IWDLTTPVASEFGLDIVDIEYLQDGGYWYVRVYIEKPDAEITLVDCANVSNRIEE--DVD 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
            +I+  + LEVSSPGI+RP+  + DF+R+ G 
Sbjct: 71  ALIDKKFFLEVSSPGIERPLKSEKDFIRFVGE 102


>gi|254516619|ref|ZP_05128678.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
 gi|219675042|gb|EED31409.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
          Length = 151

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 64/117 (54%), Gaps = 2/117 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P +E + F       L++ K+ +L++++E ++G + + DC  +S+ +  +LDVE
Sbjct: 8   LQTLLAPTVEALGFELWGTEYLIQGKHSVLRLYIESENG-VQVSDCAAVSEQVGAVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             I G Y LEVSSPG+DR + R   +  + G  +   +      ++K  G + G  +
Sbjct: 67  EPISGEYLLEVSSPGVDRRLFRLEQYAAYVGEELELRLRSPFEGRRKFKGILRGVED 123


>gi|261367203|ref|ZP_05980086.1| hypothetical protein SUBVAR_05255 [Subdoligranulum variabile DSM
           15176]
 gi|282570801|gb|EFB76336.1| hypothetical protein SUBVAR_05255 [Subdoligranulum variabile DSM
           15176]
          Length = 163

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 2/104 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G A  + ++++P +E M  R   +   +E  +  L++ ++RD+  +    CE +S+AI P
Sbjct: 9   GAAKTVETLVRPTVEGMGLRLWDVRFEKEGPDWFLRVLIDRDE-PLDTDTCEAVSRAIDP 67

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           ILD  + I+  Y LEV SPG+ R + R   +    G   A  ++
Sbjct: 68  ILDEADPIDQSYYLEVGSPGLGRRLTRPEHYEALRGQKCAAHLI 111


>gi|289434602|ref|YP_003464474.1| hypothetical protein lse_1237 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170846|emb|CBH27388.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 155

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ +E+    V I+  +E  N  L++F+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVAPITDELHLELVDIAFEKEGPNWFLRVFIDKD-GGVDIDECAAVSEKVSEKMDES 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + I  +Y LEVSSPG +RP+ ++ DF+
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDFV 93


>gi|218439320|ref|YP_002377649.1| hypothetical protein PCC7424_2360 [Cyanothece sp. PCC 7424]
 gi|226701263|sp|B7KIU5|RIMP_CYAP7 RecName: Full=Ribosome maturation factor rimP
 gi|218172048|gb|ACK70781.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7424]
          Length = 155

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 1/132 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+ E++    V++     K   +L++ +     +  L DCE++S+++   
Sbjct: 5   LIPQIIDLATPIAEKLGLEIVEVVFQTNKRPPVLRLDIRNLSSDTGLDDCEQMSRSLEAT 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   +I G Y LE+SSPGI R +    +F+ + G  V  +      ++++  G + G  
Sbjct: 65  LDATELIPGSYVLEISSPGISRQLTSDREFIAFKGFEVIVKTYTPYENQKEWRGNLQGRD 124

Query: 140 ETGFFLEKEKRG 151
           E   +L K+ R 
Sbjct: 125 EQAVYLNKKGRA 136


>gi|218288336|ref|ZP_03492635.1| protein of unknown function DUF150 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218241695|gb|EED08868.1| protein of unknown function DUF150 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 157

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 6/149 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++E  +   V I   +E KN  L++++++  G + + DC  +S+ +S  LD  
Sbjct: 10  VERLVLPIVEREAVELVDIEYTKEGKNWYLRVYIDKP-GGVDIDDCSRVSEQLSEELDRV 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG +RP+ R +DF R  G  V   +       +   G ++       
Sbjct: 69  DPIPNAYFLEVSSPGAERPLKRPADFERAVGRYVHVSLYEPLEGAKTHEGTLVSYDGERL 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            LE ++R +     + +A+  + +  ARL
Sbjct: 129 ILEIKRRSKT----VTLAVPMEKIAHARL 153


>gi|169334800|ref|ZP_02861993.1| hypothetical protein ANASTE_01206 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257538|gb|EDS71504.1| hypothetical protein ANASTE_01206 [Anaerofustis stercorihominis DSM
           17244]
          Length = 172

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 57/91 (62%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E  N +L++++ER +G ++L +   +++ +S +LD E+ IE  Y LEVSSPG++R + ++
Sbjct: 49  EGNNKVLRLYIERIEGKVSLDEISTVNRLLSDLLDEEDFIEEEYILEVSSPGVNRVIKKE 108

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            DF+++ G  V  ++      K++  G + G
Sbjct: 109 KDFIKFKGSKVDVKLYKPLNGKKQFTGILEG 139


>gi|294670567|ref|ZP_06735446.1| hypothetical protein NEIELOOT_02289 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307692|gb|EFE48935.1| hypothetical protein NEIELOOT_02289 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 143

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI  ++   +  + +  V   L  +  L  ++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQQILDKTLPGLGYELVDFELTAQGTL--RVFIDKE-GGITVEDCATVSNHLSRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           ++   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I
Sbjct: 59  DV--DYKNLEISSPGLDRPLKKTADFVRFAGQQAKIKTRLPIDGQKNFIGRI 108


>gi|259586206|sp|Q01W33|RIMP_SOLUE RecName: Full=Ribosome maturation factor rimP
          Length = 153

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           L++I +++ +G +T  DC+ +S  +  IL+ E+ I GHY LEVSSPG++R +++  D+ R
Sbjct: 37  LVRISIDKPEG-VTHADCQTVSDKVGEILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQR 95

Query: 112 WNGH 115
           ++G 
Sbjct: 96  FHGQ 99


>gi|258511412|ref|YP_003184846.1| hypothetical protein Aaci_1431 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478138|gb|ACV58457.1| protein of unknown function DUF150 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 157

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 12/152 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++E  +   V I   +E KN  L++++++  G + + DC  +S+ +S  LD  
Sbjct: 10  VERLVLPIVEREAVELVDIEYTKEGKNWYLRVYIDKP-GGVDIDDCSRVSEQLSEELDRV 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG---HVVACEIVLSSGDKQKLIGKIMGTSE 140
           + I   Y LEVSSPG +RP+ R +DF R  G   HV   E ++ +   +   G ++    
Sbjct: 69  DPIPNAYFLEVSSPGAERPLKRPADFERAVGRYVHVSLYEPLMGAKTHE---GTLVSYDG 125

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               LE ++R +     + +A+  + +  ARL
Sbjct: 126 ERLILEIKRRSKT----VTLAVPMEKIAHARL 153


>gi|229829177|ref|ZP_04455246.1| hypothetical protein GCWU000342_01262 [Shuttleworthia satelles DSM
           14600]
 gi|229792340|gb|EEP28454.1| hypothetical protein GCWU000342_01262 [Shuttleworthia satelles DSM
           14600]
          Length = 157

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 53/82 (64%), Gaps = 2/82 (2%)

Query: 31  PVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P++E+  F  V +  ++E     L+ ++++  G +T+ DC ++S+ ++ ILD E+ I+G 
Sbjct: 17  PILEKDGFSLVDVEYVKEGGQYYLRAYIDKP-GGITIDDCVDVSREMNEILDREDYIDGT 75

Query: 90  YRLEVSSPGIDRPMVRKSDFLR 111
           Y  EVSSPG+ RP+ ++ DF R
Sbjct: 76  YTFEVSSPGLGRPIRKERDFAR 97


>gi|239617902|ref|YP_002941224.1| protein of unknown function DUF150 [Kosmotoga olearia TBF 19.5.1]
 gi|239506733|gb|ACR80220.1| protein of unknown function DUF150 [Kosmotoga olearia TBF 19.5.1]
          Length = 167

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 8/136 (5%)

Query: 13  PRIF-------GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNM 64
           P IF       G   L   +  + + V EE+ +   +++  +  +  +L + ++++DG +
Sbjct: 2   PSIFISMEVVDGMYELTEKLRKLAEEVAEELGYEIYKLTFGKGRRRAVLTVAIDKEDGYI 61

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           ++ DCE  S+A    LD   II   Y L + SPG +R + +  DF+R+ G  V   +   
Sbjct: 62  SISDCENFSRAFEKKLDETEIISSSYNLVIESPGAERELRKPGDFMRFTGKSVKIVLKEP 121

Query: 125 SGDKQKLIGKIMGTSE 140
             ++  L+G+++  +E
Sbjct: 122 LENRSVLVGQLINANE 137


>gi|294815428|ref|ZP_06774071.1| Conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326443781|ref|ZP_08218515.1| ribosome maturation protein RimP [Streptomyces clavuligerus ATCC
           27064]
 gi|294328027|gb|EFG09670.1| Conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 165

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLR 111
           L+I V+ +DG  TL  C ELS+AIS  LD  + + E  Y LEVSSPG DRP+     ++R
Sbjct: 38  LRIVVDSEDG-ATLDACAELSRAISQKLDESDAMGEDEYVLEVSSPGADRPLTEHRHYVR 96

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
             G +V   +     D  +L+ +++   + G  LE
Sbjct: 97  ATGRLVKLHL----ADGGELVARVLTVDDEGLDLE 127


>gi|170077375|ref|YP_001734013.1| hypothetical protein SYNPCC7002_A0752 [Synechococcus sp. PCC 7002]
 gi|169885044|gb|ACA98757.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 166

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 1/142 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I +  +P+  E+    V +     +K  +L+I V     +  L DCE  S+ + P L+ +
Sbjct: 22  IVTCAEPIAAELGLEVVDVVFQTNKKPPVLRIDVRNLSQDTGLEDCERFSRLLDPQLEAQ 81

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            II G Y LEVSSPG DR +    +F+ + G  V  +      D+++  G +    E   
Sbjct: 82  EIIPGAYVLEVSSPGTDRNLTTDREFIAFRGFPVRVKTYAPYKDQKEWCGTLRERDEAAI 141

Query: 144 FLEKEKRGEKDMNELQIAISFD 165
            L  + +      EL   +  D
Sbjct: 142 HLNLKGKAIAIPRELVAKVQLD 163


>gi|51246467|ref|YP_066351.1| hypothetical protein DP2615 [Desulfotalea psychrophila LSv54]
 gi|81641363|sp|Q6AJY2|RIMP_DESPS RecName: Full=Ribosome maturation factor rimP
 gi|50877504|emb|CAG37344.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 151

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   +  V++ M    V I    E    +L++F++ + G +TL  C ++S+ +   LDVE
Sbjct: 9   IEGYVASVLQSMDVELVDIQFRCEGHGWVLRLFIDVE-GGVTLDLCAQVSREVGQYLDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           ++IE  Y LEVSSPG++RP+   ++F R+ G
Sbjct: 68  DVIEQAYHLEVSSPGVERPLKSLANFERFAG 98


>gi|260881110|ref|ZP_05403661.2| hypothetical protein MITSMUL_03619 [Mitsuokella multacida DSM
           20544]
 gi|260849563|gb|EEX69570.1| hypothetical protein MITSMUL_03619 [Mitsuokella multacida DSM
           20544]
          Length = 211

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 76/142 (53%), Gaps = 3/142 (2%)

Query: 25  ISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++Q ++++      V    ++E +  L+++++++ G + + DC+ LS+ +   LD  
Sbjct: 71  VEAIVQELLKDQDVIELVDAEYVKEHDWYLRVYIDKE-GGIDIEDCQALSEKLEEALDKG 129

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +++   Y LEVSSPGIDR + +  DF R  G  V   +      K+ ++G++ G      
Sbjct: 130 DVVPDSYILEVSSPGIDRVLRKPRDFTREQGKKVDVTLYAPREGKKLVVGELTGFDGDAI 189

Query: 144 FLEKEKRGE-KDMNELQIAISF 164
            L+ E +    D+ ++++ I F
Sbjct: 190 ELDGETKIPLADIAQVRLHIDF 211


>gi|88705683|ref|ZP_01103393.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88700196|gb|EAQ97305.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 167

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P +E + F       L++ K+ +L++++E ++G + + DC  +S+ +  +LDVE
Sbjct: 24  LQALLAPTVEALGFELWGTEYLIQGKHSVLRLYIESENG-VQVTDCAAVSEQVGALLDVE 82

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             I G Y LEVSSPG+DR + R   +  + G  V   +      ++K  G + G  +   
Sbjct: 83  EPISGEYVLEVSSPGVDRRLFRLEQYPGYVGEEVELRLRSPFEGRRKFKGILRGVEDEDI 142

Query: 144 FL 145
            L
Sbjct: 143 VL 144


>gi|322382350|ref|ZP_08056257.1| hypothetical protein PL1_2630 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321153703|gb|EFX46078.1| hypothetical protein PL1_2630 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 153

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 17/159 (10%)

Query: 25  ISSVIQPVIEEM--------SFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQA 75
           +SS I+ ++EEM         F  V I  ++E  N  L+++V++ +G + + DC  +S+ 
Sbjct: 1   MSSSIKSIVEEMMKDYLTENGFELVDIEYVKEGSNWFLRVYVDKLEGGIDIEDCGRISEY 60

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD ++ I   Y LEVSSPG +RP+ +  D  +  G  V         + ++  G++
Sbjct: 61  LSAKLDEKDPIPTAYFLEVSSPGAERPLKKPQDIAKSVGKHVFITTYEPVDNAKEFEGEL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++  K+        + +I ++ + SARL +
Sbjct: 121 LSFDGETLVVKTAKK--------KSSIPYEKVASARLAI 151


>gi|223044231|ref|ZP_03614268.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
           [Staphylococcus capitis SK14]
 gi|222442381|gb|EEE48489.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
           [Staphylococcus capitis SK14]
          Length = 155

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 18/154 (11%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++IQP+++++ F  V+I  ++E K+  L++ ++++ G + L DC   S+ IS  +D  
Sbjct: 8   VETIIQPILDDLKFELVEIEYVKEGKDRFLRVSIDKE-GGVDLNDCTLASEKISEAMDEN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-----SGDKQKLIGKIMGT 138
           + I   Y L+V+SPG +RP+ +  DF     + V+  I +S      GDK+ L G +   
Sbjct: 67  DPIPEMYYLDVASPGAERPIKKDKDF----QNAVSQPIFVSLYAPIEGDKEWL-GILKSV 121

Query: 139 SETGFFLE-KEKRGEKDMNELQIAISFDSLLSAR 171
            E    +E KEK   K     +I I  + +  AR
Sbjct: 122 DEDNIVMEVKEKSKTK-----EIEIPRNKIAKAR 150


>gi|169824467|ref|YP_001692078.1| hypothetical protein FMG_0770 [Finegoldia magna ATCC 29328]
 gi|303233823|ref|ZP_07320477.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
 gi|226708072|sp|B0S1E8|RIMP_FINM2 RecName: Full=Ribosome maturation factor rimP
 gi|167831272|dbj|BAG08188.1| conserved hypothetical protein associated with Nus operon
           [Finegoldia magna ATCC 29328]
 gi|302495257|gb|EFL55009.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
          Length = 154

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 29  IQPVIEE--MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           + P+I++  + F  V+ S    KN+L   ++E+DDG +++ DCE ++  IS  LD  + I
Sbjct: 14  LSPLIKDTGIEFYDVEYSNNNGKNIL-TFYIEKDDGLISIDDCELINNKISDKLDEIDPI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LE++S  I  P  R  DF +  G+VV   +      K++  G +   ++T   LE
Sbjct: 73  SDPYYLEIASVDITTPFTRDKDFKKNLGNVVIVNLYQKLDSKKEFKGILTDFNDTEISLE 132

Query: 147 KEKR 150
            EK+
Sbjct: 133 LEKK 136


>gi|27467859|ref|NP_764496.1| hypothetical protein SE0941 [Staphylococcus epidermidis ATCC 12228]
 gi|57866747|ref|YP_188414.1| hypothetical protein SERP0832 [Staphylococcus epidermidis RP62A]
 gi|251810696|ref|ZP_04825169.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876303|ref|ZP_06285170.1| conserved hypothetical protein [Staphylococcus epidermidis SK135]
 gi|293366771|ref|ZP_06613447.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|34222847|sp|Q8CST6|RIMP_STAES RecName: Full=Ribosome maturation factor rimP
 gi|81674897|sp|Q5HPS6|RIMP_STAEQ RecName: Full=Ribosome maturation factor rimP
 gi|27315404|gb|AAO04538.1|AE016747_35 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57637405|gb|AAW54193.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|251805856|gb|EES58513.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295328|gb|EFA87855.1| conserved hypothetical protein [Staphylococcus epidermidis SK135]
 gi|291319072|gb|EFE59442.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329736648|gb|EGG72914.1| hypothetical protein SEVCU045_1081 [Staphylococcus epidermidis
           VCU045]
          Length = 155

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 10/153 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++IQPV+ +++F  V I  ++E K+  L+I ++++ G + L DC   S+ IS ++D  
Sbjct: 8   VEALIQPVLNDLNFELVDIEYVKEGKDHFLRISIDKE-GGVDLNDCTIASEKISEVMDEN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRW-NGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + I   Y L+V+SPG +RP+ ++ DF    N  +         GDK+ L G +   ++  
Sbjct: 67  DPIPEMYYLDVASPGAERPIKKEKDFYNAINQPIFVSLYAPIEGDKEWL-GVLKSVNDES 125

Query: 143 FFLE-KEKRGEKDMNELQIAISFDSLLSARLIV 174
             +E KEK   K     +I I  + +  AR  V
Sbjct: 126 INMEVKEKAKTK-----EIEIPRNKIAKARHAV 153


>gi|299067339|emb|CBJ38536.1| conserved protein of unknown function [Ralstonia solanacearum
           CMR15]
          Length = 149

 Score = 58.2 bits (139), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVSSPG+DRP+    DF R
Sbjct: 15  LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--NYERLEVSSPGLDRPLRTLVDFTR 72

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           + G  V   + L    ++   G +   +
Sbjct: 73  FAGLEVKVTLRLPVNGQKNFTGIVQAPA 100


>gi|124267112|ref|YP_001021116.1| hypothetical protein Mpe_A1923 [Methylibium petroleiphilum PM1]
 gi|226732163|sp|A2SH42|RIMP_METPP RecName: Full=Ribosome maturation factor rimP
 gi|124259887|gb|ABM94881.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 177

 Score = 58.2 bits (139), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 11/99 (11%)

Query: 52  LLQIFVERDDGNM---------TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           LL++F++R  G +         T+ DCE++++ +  +L+VEN    + RLEVSSPG+DRP
Sbjct: 28  LLRVFIDRVPGQVYDGGPGEFVTVEDCEKVTRQLQYVLEVENC--DYSRLEVSSPGLDRP 85

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           + + +D+ R+ G  +   + L    ++K  G +  + E 
Sbjct: 86  LKKSADYARFAGERIDITLKLPFQGRKKYQGVLAASGEA 124


>gi|260889855|ref|ZP_05901118.1| UPF0090 protein [Leptotrichia hofstadii F0254]
 gi|260860461|gb|EEX74961.1| UPF0090 protein [Leptotrichia hofstadii F0254]
          Length = 162

 Score = 58.2 bits (139), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L+++VE+ DG  TL DC + S+ I  I D  ++IE  + LEVS+PG++R + +  DF+R+
Sbjct: 37  LRVYVEKLDGTTTLDDCIDFSREIDGIAD--DLIEEKFFLEVSTPGVERRLRKPKDFVRF 94

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
            G  +  +   +    +K IGK+        FL
Sbjct: 95  LGERINVQAKSNIEGAKKFIGKLEKFENDTVFL 127


>gi|329724310|gb|EGG60822.1| hypothetical protein SEVCU144_1771 [Staphylococcus epidermidis
           VCU144]
          Length = 155

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 10/153 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++IQPV+ +++F  V I  ++E K+  L+I ++++ G + L DC   S+ IS ++D  
Sbjct: 8   VEALIQPVLNDLNFELVDIEYVKEGKDHFLRISIDKE-GGVDLNDCTIASEKISEVMDKN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRW-NGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + I   Y L+V+SPG +RP+ +  DF    N  +         GDK+ L G +   ++  
Sbjct: 67  DPIPEMYYLDVASPGAERPIKKDKDFYNAINQPIFVSLYAPIEGDKEWL-GVLKSVNDES 125

Query: 143 FFLE-KEKRGEKDMNELQIAISFDSLLSARLIV 174
             +E KEK   K     +I I  + +  AR  V
Sbjct: 126 INMEVKEKAKTK-----EIEIPRNKIAKARHAV 153


>gi|222823265|ref|YP_002574838.1| conserved hypothetical protein (DUF150 domain protein)
           [Campylobacter lari RM2100]
 gi|254801701|sp|B9KEV2|RIMP_CAMLR RecName: Full=Ribosome maturation factor rimP
 gi|222538486|gb|ACM63587.1| conserved hypothetical protein (DUF150 domain protein)
           [Campylobacter lari RM2100]
          Length = 140

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 11/123 (8%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +++V+++ G + L DC  LS+ +SPI DVE  + G Y LEVSS G++R + +   F +
Sbjct: 27  IYRVYVQKE-GGVKLDDCARLSEILSPIFDVEPPVSGEYFLEVSSCGLERKLSKIEHFAK 85

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
               +V     +++ +K+K+  KI+   +    LE  K  EK        + F  +  AR
Sbjct: 86  SINELVK----ITTSEKEKIEAKIVSVDDENITLENLKTQEK------TTLKFSDIRKAR 135

Query: 172 LIV 174
             V
Sbjct: 136 TFV 138


>gi|259645133|sp|B1XI06|RIMP_SYNP2 RecName: Full=Ribosome maturation factor rimP
          Length = 153

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 1/142 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I +  +P+  E+    V +     +K  +L+I V     +  L DCE  S+ + P L+ +
Sbjct: 9   IVTCAEPIAAELGLEVVDVVFQTNKKPPVLRIDVRNLSQDTGLEDCERFSRLLDPQLEAQ 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            II G Y LEVSSPG DR +    +F+ + G  V  +      D+++  G +    E   
Sbjct: 69  EIIPGAYVLEVSSPGTDRNLTTDREFIAFRGFPVRVKTYAPYKDQKEWCGTLRERDEAAI 128

Query: 144 FLEKEKRGEKDMNELQIAISFD 165
            L  + +      EL   +  D
Sbjct: 129 HLNLKGKAIAIPRELVAKVQLD 150


>gi|226949775|ref|YP_002804866.1| hypothetical protein CLM_2715 [Clostridium botulinum A2 str. Kyoto]
 gi|254801446|sp|C1FS63|RIMP_CLOBJ RecName: Full=Ribosome maturation factor rimP
 gi|226844311|gb|ACO86977.1| conserved hypothetical protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 153

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 2/123 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+AIS 
Sbjct: 5   SLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAISE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++  + +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKSYNIVLNLYSPIDKKKKYEGELVDF 123

Query: 139 SET 141
           +E 
Sbjct: 124 NEN 126


>gi|254382095|ref|ZP_04997457.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194341002|gb|EDX21968.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 170

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 9/128 (7%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           K  +L++ V+ D+G + L  C ELS+ IS  LD  +++ E  Y LEVSSPG DRP+    
Sbjct: 34  KRRMLRVIVDSDEG-VELDTCAELSREISDQLDESDVMGEDEYVLEVSSPGADRPLTEHR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQ---KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISF 164
            ++R  G +V  +  L++GD +   +L+ +I+   + G  LE    G K        I+F
Sbjct: 93  HYVRALGRLVKFQ--LTAGDDKGAGELVARILDVDDEGMDLEVP--GVKGRKATARRIAF 148

Query: 165 DSLLSARL 172
             +  AR+
Sbjct: 149 TDIAKARV 156


>gi|90409005|ref|ZP_01217135.1| hypothetical protein PCNPT3_10746 [Psychromonas sp. CNPT3]
 gi|90309890|gb|EAS38045.1| hypothetical protein PCNPT3_10746 [Psychromonas sp. CNPT3]
          Length = 152

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 66/112 (58%), Gaps = 2/112 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +  P +E++ +  V I      K+ +L+++++++ G + + DC  +S+ IS ++DVE
Sbjct: 8   LTDMFTPSVEDLGYELVGIEYTRAGKHSILRVYIDQEAG-ILVDDCAAVSRQISALMDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           + I   Y LEVSSPG++RP+   + +  + G  V  ++ +   ++++  G I
Sbjct: 67  DPITNEYTLEVSSPGLERPLFSATHYQAFVGSKVKIQLRMPIQNRRRWKGMI 118


>gi|91792365|ref|YP_562016.1| hypothetical protein Sden_1005 [Shewanella denitrificans OS217]
 gi|123166362|sp|Q12QI3|RIMP_SHEDO RecName: Full=Ribosome maturation factor rimP
 gi|91714367|gb|ABE54293.1| protein of unknown function DUF150 [Shewanella denitrificans OS217]
          Length = 151

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           ++ ++++F++ + G + + DC E S+ +S +LDVE+ I   Y LEVSSPG+DRP+   + 
Sbjct: 33  RHSIVRVFIDSEKG-IFIEDCAETSRQVSAVLDVEDPITTEYTLEVSSPGVDRPLFTAAQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  + G     ++ +     + L G I
Sbjct: 92  YQAYIGEDAKVQLTMPVAGSRNLKGVI 118


>gi|237752794|ref|ZP_04583274.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376283|gb|EEO26374.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 150

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 74/131 (56%), Gaps = 3/131 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERD--DGNMTLRDCEELSQA 75
           M ++ ++   I+ ++E + F    + +L E +N +L+I + ++    +++L DC+E+S A
Sbjct: 1   MTISPNLEDKIKVLVESLGFDLYDVLTLKENENQILRICITKNMESKSVSLDDCQEVSLA 60

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +SP+LDVE      Y LEVSSPGI+R +   + +      ++  + +     K++  GK+
Sbjct: 61  LSPLLDVEMPDFEKYYLEVSSPGIERVLKTLAHYKGAINELIKVKTLQEIAGKKEFKGKL 120

Query: 136 MGTSETGFFLE 146
           +  SE+   LE
Sbjct: 121 VSVSESVLVLE 131


>gi|242242548|ref|ZP_04796993.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           W23144]
 gi|242233975|gb|EES36287.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           W23144]
 gi|319401445|gb|EFV89655.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 155

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 10/153 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++IQPV+ ++ F  V I  ++E K+  L+I ++++ G + L DC   S+ IS ++D  
Sbjct: 8   VEALIQPVLNDLDFELVDIEYVKEGKDHFLRISIDKE-GGVDLNDCTLASEKISEVMDEN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRW-NGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + I   Y L+V+SPG +RP+ ++ DF    N  +         GDK+ L G +   ++  
Sbjct: 67  DPIPEMYYLDVASPGAERPIKKEKDFYNAINQPIFVSLYAPIEGDKEWL-GILKSVNDES 125

Query: 143 FFLE-KEKRGEKDMNELQIAISFDSLLSARLIV 174
             +E KEK   K     +I I  + +  AR  V
Sbjct: 126 INMEVKEKAKTK-----EIEIPRNKIAKARHAV 153


>gi|187251075|ref|YP_001875557.1| hypothetical protein Emin_0665 [Elusimicrobium minutum Pei191]
 gi|259585767|sp|B2KC93|RIMP_ELUMP RecName: Full=Ribosome maturation factor rimP
 gi|186971235|gb|ACC98220.1| Uncharacterized protein conserved in bacteria [Elusimicrobium
           minutum Pei191]
          Length = 152

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           L Q FV+++ G + L D E+ S+ I  I+++EN+IEG Y LE SSPGI R + +   F +
Sbjct: 35  LFQFFVDKE-GGINLDDVEKASRLIDSIIEMENLIEGAYILEASSPGIKRVLKKPEHFKK 93

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           + G      +     ++    G I G +ET
Sbjct: 94  FIGQRAKITLKQMIENRANFTGLIAGANET 123


>gi|148380377|ref|YP_001254918.1| hypothetical protein CBO2421 [Clostridium botulinum A str. ATCC
           3502]
 gi|153933725|ref|YP_001384597.1| hypothetical protein CLB_2286 [Clostridium botulinum A str. ATCC
           19397]
 gi|153935745|ref|YP_001388113.1| hypothetical protein CLC_2269 [Clostridium botulinum A str. Hall]
 gi|166987426|sp|A7FVZ7|RIMP_CLOB1 RecName: Full=Ribosome maturation factor rimP
 gi|166987470|sp|A5I4J7|RIMP_CLOBH RecName: Full=Ribosome maturation factor rimP
 gi|148289861|emb|CAL83969.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929769|gb|ABS35269.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152931659|gb|ABS37158.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
          Length = 153

 Score = 57.8 bits (138), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 2/123 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+AIS 
Sbjct: 5   SLIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAISE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++  + +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKSYNIVLNLYSPIDKKKKYEGELVDF 123

Query: 139 SET 141
           +E 
Sbjct: 124 NEN 126


>gi|291613947|ref|YP_003524104.1| hypothetical protein Slit_1480 [Sideroxydans lithotrophicus ES-1]
 gi|291584059|gb|ADE11717.1| protein of unknown function DUF150 [Sideroxydans lithotrophicus
           ES-1]
          Length = 141

 Score = 57.8 bits (138), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 81/150 (54%), Gaps = 13/150 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D++ +++  +  M +  V + +      L+++F+++ DG +++ DCE +S  +  +  VE
Sbjct: 2   DVAKLVETTLAGMGYELVDLEV--SGRGLMRVFMDKPDG-ISVEDCERVSNQLVRLFTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +   + RLEVSSPG+DR + ++SDF+R+ G     ++ +    ++   G I+G  + G 
Sbjct: 59  GV--EYERLEVSSPGLDRVLKKESDFVRFAGQKAQIKVRVPLAGRKNFAG-IIGEVKDGV 115

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                   + D++   +AI   ++  ARL+
Sbjct: 116 V-------QLDVDGSLVAIELSNMDKARLV 138


>gi|271963646|ref|YP_003337842.1| hypothetical protein Sros_2114 [Streptosporangium roseum DSM 43021]
 gi|270506821|gb|ACZ85099.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 166

 Score = 57.8 bits (138), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 9/122 (7%)

Query: 28  VIQPVI--EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           +++PV+  E +    V ++    K  LL++ V+RD G ++L D  E+S A+S  LD ++ 
Sbjct: 13  LLEPVVGAEGLDLEDVTVTP-AGKRRLLRVVVDRD-GGVSLDDVAEVSLAVSATLDADDA 70

Query: 86  IEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           +    Y LEVSSPG+DRP+     + R    +V  ++     D   + G+I+ T ETG  
Sbjct: 71  MGATPYVLEVSSPGVDRPLTEPRHWRRAVKRLVKADL----RDGTSVEGRIVATDETGVE 126

Query: 145 LE 146
           L+
Sbjct: 127 LD 128


>gi|302542144|ref|ZP_07294486.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302459762|gb|EFL22855.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 168

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 6/99 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           K  +L+I V+ DDG + L  C ELS+AIS  LD  + + +  Y LEV+SPG +RP++ + 
Sbjct: 34  KRRVLRIVVDSDDG-VQLDTCAELSRAISQALDESDAMGQTPYVLEVTSPGAERPLIEQR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            + R  G ++  ++V    +  +LI +I+   + G  LE
Sbjct: 93  HYRRATGRLMKAQLV----EGGELIARIIAVDDEGLDLE 127


>gi|88597399|ref|ZP_01100634.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88190460|gb|EAQ94434.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 147

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 10/111 (9%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + L DC  LS+ +SPI DVE  + G Y LEVSS G++R + +   F +    +V     +
Sbjct: 45  VNLDDCARLSEILSPIFDVEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVK----I 100

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++G+K+K+  KI+   +    LE  +  EK        I+F+ +  AR  +
Sbjct: 101 TTGEKEKIEAKIISVEDENITLENLENKEK------TTINFNDIKKARTFI 145


>gi|297180948|gb|ADI17151.1| uncharacterized protein conserved in bacteria [uncultured gamma
           proteobacterium HF0070_08D07]
          Length = 152

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 11/152 (7%)

Query: 24  DISSVIQPVIEEMSFR--SVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +I S++ P IE +  R   V++    + NL + ++++ +DG +++ DC  +S+ +S ILD
Sbjct: 7   NIESLVAPTIEALGCRIWGVELQGGLKNNLKVVVYIDSEDG-ISVDDCATVSEHVSDILD 65

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +E ++   Y LEVSSPG+DR + ++  F    G  +   +      ++KL G ++   + 
Sbjct: 66  MEELVPSPYVLEVSSPGLDRILFKEQHFKESLGLKIDVRLNRPFEGRKKLTGVLLDYGDL 125

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              L ++K G ++       I  D++   RL+
Sbjct: 126 ELIL-RDKMGVRN-------IPVDAIRKVRLV 149


>gi|217964532|ref|YP_002350210.1| hypothetical protein LMHCC_1249 [Listeria monocytogenes HCC23]
 gi|290893568|ref|ZP_06556551.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|254800006|sp|B8DG06|RIMP_LISMH RecName: Full=Ribosome maturation factor rimP
 gi|217333802|gb|ACK39596.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
 gi|290556913|gb|EFD90444.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|307570902|emb|CAR84081.1| conserved hypothetical protein [Listeria monocytogenes L99]
 gi|313608988|gb|EFR84730.1| conserved hypothetical protein [Listeria monocytogenes FSL F2-208]
          Length = 155

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 2/86 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P+ +E+    V I   +E  N  L+IF+++D G + + +C  +S+ +S  +D  
Sbjct: 8   VEAIVAPITDELQLELVDIVFEKEGPNWFLRIFIDKD-GGVDIDECAAVSEKVSEKMDEN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I  +Y LEVSSPG +RP+ ++ DF
Sbjct: 67  DPITQNYFLEVSSPGAERPLKKEQDF 92


>gi|253573563|ref|ZP_04850906.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251847091|gb|EES75096.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 153

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P +EE  F  V +  ++E  N  L++FV+++ G + + DC  +S+ +S  
Sbjct: 6   IKATVEQMVTPYLEENGFELVDVEYVKEGSNWFLRVFVDKE-GGIDIDDCGRISEYLSEK 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LEVSSPG +RP+ +  D  +  G  V           ++  G+++   
Sbjct: 65  LDENDPIPSAYFLEVSSPGAERPLKKAEDVSKAVGKDVFVTTYEPVDGLKEFEGRLLSFD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +E  K+        + AI ++ + SARL +
Sbjct: 125 GDELVVEVGKK--------RHAIPYNKVASARLAI 151


>gi|253681731|ref|ZP_04862528.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
 gi|253561443|gb|EES90895.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
          Length = 154

 Score = 57.4 bits (137), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ +++P++E +++    I  + E+N   L+I+++   G + L DCE++S+ +S +LD +
Sbjct: 11  INELVRPIVEGLNYELYYIEYVREQNENYLRIYIDSSKG-INLEDCEKVSRKVSDMLDEK 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRW-NGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + IE  Y LEVSSPGI+R +       ++ N  +V     L  G ++   GK++  ++  
Sbjct: 70  DPIEDGYYLEVSSPGIERVLHTDEHLHKYINNQIVIKLAKLFEGSREHQ-GKLLNFNDES 128

Query: 143 FFLEKE 148
             ++K+
Sbjct: 129 ITIQKD 134


>gi|17546006|ref|NP_519408.1| hypothetical protein RSc1287 [Ralstonia solanacearum GMI1000]
 gi|34222937|sp|Q8XZV8|RIMP_RALSO RecName: Full=Ribosome maturation factor rimP
 gi|17428301|emb|CAD14989.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000]
          Length = 162

 Score = 57.4 bits (137), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 62/115 (53%), Gaps = 4/115 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN
Sbjct: 3   LTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +   + RLEVSSPG+DRP+    DF R+ G      + L    ++   G +   +
Sbjct: 61  V--NYERLEVSSPGLDRPLRTLVDFARFAGLEAKVTLRLPVNGQKNFTGIVQAPA 113


>gi|306820435|ref|ZP_07454071.1| protein of hypothetical function DUF150 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551510|gb|EFM39465.1| protein of hypothetical function DUF150 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 153

 Score = 57.4 bits (137), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 14/129 (10%)

Query: 25  ISSVIQPVIEEMSFRS-------VQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           +S  I+ + EE+  R        V +  ++E   + L+I +++D G+MT+ DC +LS  I
Sbjct: 1   MSKKIEQITEELVLRVLPEEYEMVDVEYVKEAGEMYLRILIDKD-GSMTIDDCVKLSGII 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK---QKLIG 133
              +D ++ I+  Y LE+SSPG+DR + +  DF+R  G  V  E+ L   D+   ++ + 
Sbjct: 60  GDEIDKKDYIKDAYNLEISSPGLDRTLKKDRDFVREKGKDV--EVKLFKKDEKYGKEFVA 117

Query: 134 KIMGTSETG 142
            + G  E G
Sbjct: 118 VLEGLDENG 126


>gi|167625061|ref|YP_001675355.1| hypothetical protein Shal_3149 [Shewanella halifaxensis HAW-EB4]
 gi|189039835|sp|B0TQA4|RIMP_SHEHH RecName: Full=Ribosome maturation factor rimP
 gi|167355083|gb|ABZ77696.1| protein of unknown function DUF150 [Shewanella halifaxensis
           HAW-EB4]
          Length = 151

 Score = 57.4 bits (137), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 1/89 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K+ +L+++++ + G + + DC E S+ +S +LDVE+ I   Y LEVSSPG++R +     
Sbjct: 33  KHSILRLYIDNEKG-IFIEDCAEASRQVSAVLDVEDPITSEYTLEVSSPGVERLLFTAEQ 91

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +  + G  V  ++ +     + L G + G
Sbjct: 92  YKAYIGETVKVQLTMPVAGSRNLKGTVTG 120


>gi|289646959|ref|ZP_06478302.1| hypothetical protein Psyrpa2_04287 [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 152

 Score = 57.4 bits (137), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  V+ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LDVE
Sbjct: 8   LQDVLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG++RP+     F  + G  V  ++
Sbjct: 67  DPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKL 104


>gi|310641592|ref|YP_003946350.1| ribosome maturation factor rimp [Paenibacillus polymyxa SC2]
 gi|309246542|gb|ADO56109.1| Ribosome maturation factor rimP [Paenibacillus polymyxa SC2]
          Length = 153

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + QP ++E  F  V +  ++E  N  L++FV++D G + L DC  +S+ +   LD  
Sbjct: 10  VEEMAQPYLDEHGFELVDVEYVKEGSNWFLRVFVDKD-GGIDLDDCSMISEYLGQKLDEN 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + +   Y LEVSSPG +RP+ +  D  +  G  V
Sbjct: 69  DPVSTAYFLEVSSPGAERPLKKAEDVTKAVGKNV 102


>gi|300721536|ref|YP_003710811.1| hypothetical protein XNC1_0503 [Xenorhabdus nematophila ATCC 19061]
 gi|297628028|emb|CBJ88577.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 140

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V +  +  +   L+++++ ++G +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVEALGFELVGLEFIRARVSTLRVYIDSEEG-ITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             Y LE+SSPG++RP+     + R+ G  V   + ++  ++++  G I
Sbjct: 60  VLYNLEISSPGLERPLFTAEHYQRFIGEEVNVVLRMAMQNRRRWQGII 107


>gi|294339929|emb|CAZ88292.1| conserved hypothetical protein [Thiomonas sp. 3As]
          Length = 191

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 6/84 (7%)

Query: 35  EMSFRSVQISLLEEKNL---LLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHY 90
           + +  S+ + L+E ++L   LL++ ++  DG  +T+ DCE +++ +  + +VEN+  G  
Sbjct: 8   DTAVTSLGLELVEVEHLPRGLLRVTIDHADGAPVTVEDCERVTRQLQYVFEVENVDYG-- 65

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNG 114
           RLEVSSPG+DRP+ +  DF+R+ G
Sbjct: 66  RLEVSSPGLDRPLRKSEDFVRFAG 89


>gi|308068696|ref|YP_003870301.1| hypothetical protein PPE_01927 [Paenibacillus polymyxa E681]
 gi|305857975|gb|ADM69763.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 153

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + QP ++E  F  V +  ++E  N  L++FV++D G + L DC  +S+ +   LD  
Sbjct: 10  VEEMAQPYLDEHGFELVDVEYVKEGSNWFLRVFVDKD-GGIDLDDCSMISEYLGQKLDEN 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + +   Y LEVSSPG +RP+ +  D  +  G  V
Sbjct: 69  DPVSTAYFLEVSSPGAERPLKKAEDVTKAVGKNV 102


>gi|329120393|ref|ZP_08249060.1| protein of hypothetical function DUF150 [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327462348|gb|EGF08674.1| protein of hypothetical function DUF150 [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 192

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 51/83 (61%), Gaps = 3/83 (3%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L++F++++ G +T+ DC  +S  +S +  VE++   +  LE+SSPG+DRP+ + +DF R+
Sbjct: 78  LRVFIDKE-GGITIDDCAAVSNHLSRLFTVEDV--DYKNLEISSPGLDRPLKKAADFARF 134

Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135
            G     +  L    ++  IG+I
Sbjct: 135 AGQEAKIKTRLPVDGQKNFIGRI 157


>gi|331269631|ref|YP_004396123.1| hypothetical protein CbC4_1447 [Clostridium botulinum BKT015925]
 gi|329126181|gb|AEB76126.1| Hypothetical UPF0090 protein [Clostridium botulinum BKT015925]
          Length = 154

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ +++P++E +++    I  + E+N   L+I+++   G + L DC+++S+ +S +LD +
Sbjct: 11  INELVRPIVEGLNYELYYIEYVREQNENYLRIYIDSSKG-INLEDCQKVSRKVSDMLDEK 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRW-NGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + IE  Y LEVSSPGI+R +       ++ N  +V     L  G ++   GK++  ++  
Sbjct: 70  DPIEDGYYLEVSSPGIERILHTDEHLHKYINNQIVIKLAKLFEGSREHQ-GKLLSFNDES 128

Query: 143 FFLEKE 148
             +EK+
Sbjct: 129 ITMEKD 134


>gi|116492652|ref|YP_804387.1| hypothetical protein PEPE_0886 [Pediococcus pentosaceus ATCC 25745]
 gi|122265884|sp|Q03FS7|RIMP_PEDPA RecName: Full=Ribosome maturation factor rimP
 gi|116102802|gb|ABJ67945.1| hypothetical protein PEPE_0886 [Pediococcus pentosaceus ATCC 25745]
          Length = 158

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 83/157 (52%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++QP+ +  +F  V++  ++E +   L++++++  G + + +C  +S  +S ILD +
Sbjct: 9   VTELVQPITDRHNFELVEVEFVKEGQGWFLRVYIDKV-GGINIEECAMVSDELSEILDAQ 67

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +   I   Y LEVSSPG +RP+  K D  R  G  +   +  +S +KQK+    + + E 
Sbjct: 68  DPDPIPQAYFLEVSSPGAERPLKTKEDLTRSIGEYIHISL-YASINKQKVFEGYLKSFEN 126

Query: 142 GF----FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +L+K +  E       + +++D +  ARL +
Sbjct: 127 DEIVLDYLDKTRHKE-------LKVTYDQVAFARLAI 156


>gi|107022572|ref|YP_620899.1| hypothetical protein Bcen_1018 [Burkholderia cenocepacia AU 1054]
 gi|116689520|ref|YP_835143.1| hypothetical protein Bcen2424_1498 [Burkholderia cenocepacia
           HI2424]
 gi|170732824|ref|YP_001764771.1| hypothetical protein Bcenmc03_1474 [Burkholderia cenocepacia MC0-3]
 gi|254245587|ref|ZP_04938908.1| hypothetical protein BCPG_00296 [Burkholderia cenocepacia PC184]
 gi|122978973|sp|Q1BWS9|RIMP_BURCA RecName: Full=Ribosome maturation factor rimP
 gi|166979874|sp|A0K6X3|RIMP_BURCH RecName: Full=Ribosome maturation factor rimP
 gi|226734185|sp|B1K0L8|RIMP_BURCC RecName: Full=Ribosome maturation factor rimP
 gi|105892761|gb|ABF75926.1| protein of unknown function DUF150 [Burkholderia cenocepacia AU
           1054]
 gi|116647609|gb|ABK08250.1| protein of unknown function DUF150 [Burkholderia cenocepacia
           HI2424]
 gi|124870363|gb|EAY62079.1| hypothetical protein BCPG_00296 [Burkholderia cenocepacia PC184]
 gi|169816066|gb|ACA90649.1| protein of unknown function DUF150 [Burkholderia cenocepacia MC0-3]
          Length = 152

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G ++L DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-ISLEDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G  V+  +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|296135766|ref|YP_003643008.1| protein of unknown function DUF150 [Thiomonas intermedia K12]
 gi|295795888|gb|ADG30678.1| protein of unknown function DUF150 [Thiomonas intermedia K12]
          Length = 191

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 6/84 (7%)

Query: 35  EMSFRSVQISLLEEKNL---LLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHY 90
           + +  S+ + L+E ++L   LL++ ++  DG  +T+ DCE +++ +  + +VEN+  G  
Sbjct: 8   DTAVTSLGLELVEVEHLPRGLLRVTIDHADGAPVTVEDCERVTRQLQYVFEVENVDYG-- 65

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNG 114
           RLEVSSPG+DRP+ +  DF+R+ G
Sbjct: 66  RLEVSSPGLDRPLRKAEDFVRFAG 89


>gi|157803621|ref|YP_001492170.1| hypothetical protein A1E_02200 [Rickettsia canadensis str. McKiel]
 gi|166987409|sp|A8EYF2|RIMP_RICCK RecName: Full=Ribosome maturation factor rimP
 gi|157784884|gb|ABV73385.1| hypothetical protein A1E_02200 [Rickettsia canadensis str. McKiel]
          Length = 125

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 65/113 (57%), Gaps = 1/113 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVE 83
           I++VI+  + +M F  V +      + +++I ++  +   +++ DC ++S+ I  ILDVE
Sbjct: 8   ITNVIEESLIDMGFELVLVKFKGVNSKVVEILIDSLNSEKVSVEDCTKVSRTIPAILDVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           N+IE    LEV+S G++RP+V+  ++ R+ G  V   +     DK    GKI+
Sbjct: 68  NLIEDASSLEVASSGLERPLVKFENYNRFLGREVKITLKELLNDKTSYQGKII 120


>gi|187931004|ref|YP_001890988.1| protein Lpl2691 [Francisella tularensis subsp. mediasiatica FSC147]
 gi|226696222|sp|B2SEW5|RIMP_FRATM RecName: Full=Ribosome maturation factor rimP
 gi|187711913|gb|ACD30210.1| protein Lpl2691 [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 150

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 77/142 (54%), Gaps = 5/142 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ IS + 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEISAVF 60

Query: 81  DVENIIEGHYRLEVSSPGIDRP---MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           DVE+ + G Y LEVSSPG++R    +++    + +N   V    V S    + ++ ++ G
Sbjct: 61  DVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQ 159
            S     LE  K    D +EL+
Sbjct: 121 NSVI-LNLEDGKEISFDFDELK 141


>gi|78066109|ref|YP_368878.1| hypothetical protein Bcep18194_A4639 [Burkholderia sp. 383]
 gi|91208362|sp|Q39H32|RIMP_BURS3 RecName: Full=Ribosome maturation factor rimP
 gi|77966854|gb|ABB08234.1| protein of unknown function DUF150 [Burkholderia sp. 383]
          Length = 152

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G ++L DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-ISLEDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G  V+  +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|257784635|ref|YP_003179852.1| hypothetical protein Apar_0832 [Atopobium parvulum DSM 20469]
 gi|257473142|gb|ACV51261.1| protein of unknown function DUF150 [Atopobium parvulum DSM 20469]
          Length = 164

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 8/130 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQA---ISPILDVENIIEGHYRLEVSSPGIDRPMVR 105
           KN L+++ ++ DD        +E++Q    IS  +D  +     + LEVSSPG+ RP+ R
Sbjct: 35  KNPLVRVRIDHDDETEETISLDEVAQETSWISETIDELDPFPASFTLEVSSPGMARPLRR 94

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR-GEKDMNELQ---IA 161
             DF+R+ G  V  +   + G ++K  G ++G   T   ++ E      D++EL+   I 
Sbjct: 95  AKDFVRFAGQEVQLQTTATEG-RRKFTGTLLGIEGTTISIQTEDEVCTIDLSELKKCVIK 153

Query: 162 ISFDSLLSAR 171
            +FD L SA+
Sbjct: 154 PAFDFLTSAK 163


>gi|224476388|ref|YP_002633994.1| hypothetical protein Sca_0900 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254807265|sp|B9DPF1|RIMP_STACT RecName: Full=Ribosome maturation factor rimP
 gi|222420995|emb|CAL27809.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 155

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 2/80 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  +IQPV+++++F  V+I   +E K+  L+I ++++ G + L DC   S+ IS +++ E
Sbjct: 8   IEEIIQPVLDDLNFELVEIEFTKEGKDHFLRISIDKE-GGVDLNDCTLASEKISEVMNEE 66

Query: 84  NIIEGHYRLEVSSPGIDRPM 103
           + IE  Y L+V+SPG +RP+
Sbjct: 67  DPIEQMYYLDVASPGAERPI 86


>gi|149194181|ref|ZP_01871279.1| hypothetical protein CMTB2_03813 [Caminibacter mediatlanticus TB-2]
 gi|149136134|gb|EDM24612.1| hypothetical protein CMTB2_03813 [Caminibacter mediatlanticus TB-2]
          Length = 147

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 4/108 (3%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ +VI+ ++E+       I    E ++   ++++ +  G + L DC  ++  ISPI DV
Sbjct: 5   ELKNVIKNIVEDNGCELYDIEETTEGEHKYFRVYITKP-GGVNLNDCTAINNLISPIFDV 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           E+ ++G Y LEVSSPG++R + +   F +  G  V  ++ L+ G K K
Sbjct: 64  EDPVDGKYFLEVSSPGVERKLTKSEHFEKSIGENV--KVTLNDGTKIK 109


>gi|70726650|ref|YP_253564.1| hypothetical protein SH1649 [Staphylococcus haemolyticus JCSC1435]
 gi|82582359|sp|Q4L5W7|RIMP_STAHJ RecName: Full=Ribosome maturation factor rimP
 gi|68447374|dbj|BAE04958.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 155

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++ ++I P+++E++F  V++   +E K+  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   ITEEVETIITPILDELNFELVEVEYTKEGKDHFLRISIDKE-GGVNLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQKLIGKIMGT 138
           +D  + I   Y L+V+SPG +RP+ ++ D+       V   +     GDK+ L G +   
Sbjct: 63  MDENDPIPDMYYLDVASPGAERPIKKEKDYHNAIDKPVFVSLYAPIEGDKEWL-GILKAV 121

Query: 139 SETGFFLE-KEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    +E KEK   K     QI I  + +  AR  V
Sbjct: 122 DDDTITMEVKEKAKTK-----QIEIPRNKIAKARHAV 153


>gi|255530055|ref|YP_003090427.1| hypothetical protein Phep_0139 [Pedobacter heparinus DSM 2366]
 gi|255343039|gb|ACU02365.1| protein of unknown function DUF150 [Pedobacter heparinus DSM 2366]
          Length = 154

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 77/136 (56%), Gaps = 8/136 (5%)

Query: 41  VQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGID 100
           V++ +L    L+  I V+ D+G ++++DC  +S+ +   L+ EN IE  Y LEVSSPG+ 
Sbjct: 24  VEVKMLPNNKLI--IHVDGDEG-ISIQDCAAISRHVGFHLEEENTIEKAYNLEVSSPGVG 80

Query: 101 RPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE-KEKRGEKDMNELQ 159
            P+  K  +L+  G  ++ +  L  G+ ++  GK++   E G  +E K K   K +  ++
Sbjct: 81  EPLKLKRQYLKNVGRELSVK--LDGGEVKE--GKLLAADEQGITIEAKIKEKGKKVQLVE 136

Query: 160 IAISFDSLLSARLIVT 175
             I F+ ++  +++++
Sbjct: 137 TRIDFNKIIETKVLIS 152


>gi|222151099|ref|YP_002560253.1| hypothetical protein MCCL_0850 [Macrococcus caseolyticus JCSC5402]
 gi|254806624|sp|B9EBE6|RIMP_MACCJ RecName: Full=Ribosome maturation factor rimP
 gi|222120222|dbj|BAH17557.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 155

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 4/123 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++ QPV+E + F  V +  ++E  +  L+I +++  G + + DC   S+ IS ++D E
Sbjct: 8   VEAICQPVVESLGFELVDVEYVKEGPDYYLRIAIDKP-GGIDISDCALASEKISEVMDKE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG-HVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + I   Y L+VSSPG +RP+ ++ D+    G HV         GDK+  IG++   S+  
Sbjct: 67  DPITEAYFLDVSSPGAERPLKKEKDYENAIGKHVYVKLYEPVEGDKE-WIGELKEVSKDT 125

Query: 143 FFL 145
             L
Sbjct: 126 ITL 128


>gi|33592373|ref|NP_880017.1| hypothetical protein BP1245 [Bordetella pertussis Tohama I]
 gi|33602224|ref|NP_889784.1| hypothetical protein BB3248 [Bordetella bronchiseptica RB50]
 gi|51316792|sp|Q7VYR4|RIMP_BORPE RecName: Full=Ribosome maturation factor rimP
 gi|51316959|sp|Q7WHG0|RIMP_BORBR RecName: Full=Ribosome maturation factor rimP
 gi|33572018|emb|CAE41541.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|33576662|emb|CAE33740.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
 gi|332381789|gb|AEE66636.1| hypothetical protein BPTD_1235 [Bordetella pertussis CS]
          Length = 168

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 47/66 (71%), Gaps = 3/66 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++ ++R DG + + DCE++S+ +S + +VENI   + RLEV SPG+DRP+  +++F R
Sbjct: 29  LLRVTIDRVDG-VRIEDCEQVSRQLSRVYEVENI--DYKRLEVGSPGVDRPLRNEAEFRR 85

Query: 112 WNGHVV 117
           + G  +
Sbjct: 86  FAGERI 91


>gi|332184779|gb|AEE27033.1| clustered with transcription termination protein NusA [Francisella
           cf. novicida 3523]
          Length = 150

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 53/81 (65%), Gaps = 1/81 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ +S I 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEVSAIF 60

Query: 81  DVENIIEGHYRLEVSSPGIDR 101
           DVE+ I G Y LEVSSPG++R
Sbjct: 61  DVEDPISGKYILEVSSPGMNR 81


>gi|319892282|ref|YP_004149157.1| transcription termination protein NusA-like protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161978|gb|ADV05521.1| transcription termination protein NusA-like protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464621|gb|ADX76774.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 155

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 8/152 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++IQPV++E++F  V +   +E ++  L+I +++  G + L DC   S+ IS ++D +
Sbjct: 8   VETIIQPVLDELNFELVDVEFAKEGRDHYLRIAIDKP-GGVDLNDCTLASERISEVMDEQ 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQKLIGKIMGTSETG 142
           + I   Y L+VSSPG +RP+  +  F       +   +     GDK+ L G +   +E  
Sbjct: 67  DPIPQAYYLDVSSPGAERPIKNEKGFQNAIEQPIFVSLYAPIEGDKEWL-GHLKSVTEDA 125

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +E + + +       I I  D +  AR  V
Sbjct: 126 ITMEVKVKAKTKT----ITIPRDKIAKARHAV 153


>gi|259585811|sp|A6T0Z0|RIMP_JANMA RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 57/95 (60%), Gaps = 9/95 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISPI 79
           +S++I+  +  M +  V     +    L+++F++      D G +T+ DCE+++  +  +
Sbjct: 3   LSALIEKTVVGMGYELVNFE--QAARGLVRVFIDFTPEDADKGAITVEDCEKVTHQLLHV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           L VEN    + RLEVSSPG+DRP+ + SD++R+ G
Sbjct: 61  LTVENA--NYERLEVSSPGLDRPLKKLSDYVRFAG 93


>gi|325526250|gb|EGD03869.1| ribosome maturation protein RimP [Burkholderia sp. TJI49]
          Length = 152

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L +++++  G ++L DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCVYIDQPAG-ISLEDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G  V+  +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|69246861|ref|ZP_00604153.1| Protein of unknown function DUF150 [Enterococcus faecium DO]
 gi|257878527|ref|ZP_05658180.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257882945|ref|ZP_05662598.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257884341|ref|ZP_05663994.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257889276|ref|ZP_05668929.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257894714|ref|ZP_05674367.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|258615948|ref|ZP_05713718.1| hypothetical protein EfaeD_09568 [Enterococcus faecium DO]
 gi|260560112|ref|ZP_05832290.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|261207400|ref|ZP_05922086.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289566678|ref|ZP_06447095.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|293556648|ref|ZP_06675213.1| hypothetical protein EfmE1039_1955 [Enterococcus faecium E1039]
 gi|293560201|ref|ZP_06676703.1| hypothetical protein EfmE1162_0858 [Enterococcus faecium E1162]
 gi|293567722|ref|ZP_06679064.1| hypothetical protein EfmE1071_0525 [Enterococcus faecium E1071]
 gi|294613938|ref|ZP_06693873.1| hypothetical protein EfmE1636_0063 [Enterococcus faecium E1636]
 gi|294618724|ref|ZP_06698256.1| hypothetical protein EfmE1679_1593 [Enterococcus faecium E1679]
 gi|294620762|ref|ZP_06699969.1| hypothetical protein EfmU0317_0176 [Enterococcus faecium U0317]
 gi|68195042|gb|EAN09505.1| Protein of unknown function DUF150 [Enterococcus faecium DO]
 gi|257812755|gb|EEV41513.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257818603|gb|EEV45931.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257820179|gb|EEV47327.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257825636|gb|EEV52262.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257831093|gb|EEV57700.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|260073947|gb|EEW62271.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|260078291|gb|EEW65996.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289161537|gb|EFD09420.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291589565|gb|EFF21371.1| hypothetical protein EfmE1071_0525 [Enterococcus faecium E1071]
 gi|291593213|gb|EFF24787.1| hypothetical protein EfmE1636_0063 [Enterococcus faecium E1636]
 gi|291595037|gb|EFF26382.1| hypothetical protein EfmE1679_1593 [Enterococcus faecium E1679]
 gi|291599742|gb|EFF30752.1| hypothetical protein EfmU0317_0176 [Enterococcus faecium U0317]
 gi|291601183|gb|EFF31470.1| hypothetical protein EfmE1039_1955 [Enterococcus faecium E1039]
 gi|291605873|gb|EFF35305.1| hypothetical protein EfmE1162_0858 [Enterococcus faecium E1162]
          Length = 157

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 66/109 (60%), Gaps = 5/109 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ P+++E +F  V++  ++E K+  L++F++++ G + + +C  +S+ +S  LD  
Sbjct: 8   VTEMVTPILDEQNFELVEVEFVKEGKSWFLRVFIDKE-GGIDIEECAFVSEKLSEKLDAA 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQ 129
             + I   Y LEVSSPG +RP+ ++SD+ +  G  V   +     G+KQ
Sbjct: 67  DPDPIPQAYFLEVSSPGAERPLKKESDYEKALGDYVHVSLYQPVDGEKQ 115


>gi|161524930|ref|YP_001579942.1| hypothetical protein Bmul_1757 [Burkholderia multivorans ATCC
           17616]
 gi|189350320|ref|YP_001945948.1| hypothetical protein BMULJ_01483 [Burkholderia multivorans ATCC
           17616]
 gi|221197755|ref|ZP_03570801.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
 gi|221204687|ref|ZP_03577704.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221214881|ref|ZP_03587849.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|226734876|sp|A9ABD7|RIMP_BURM1 RecName: Full=Ribosome maturation factor rimP
 gi|160342359|gb|ABX15445.1| protein of unknown function DUF150 [Burkholderia multivorans ATCC
           17616]
 gi|189334342|dbj|BAG43412.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
 gi|221165108|gb|EED97586.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|221175544|gb|EEE07974.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221181687|gb|EEE14088.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
          Length = 152

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L +++++  G ++L DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCVYIDQPAG-ISLEDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G  V+  +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|33596481|ref|NP_884124.1| hypothetical protein BPP1860 [Bordetella parapertussis 12822]
 gi|51316795|sp|Q7W9A7|RIMP_BORPA RecName: Full=Ribosome maturation factor rimP
 gi|33566250|emb|CAE37161.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 168

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 47/66 (71%), Gaps = 3/66 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++ ++R DG + + DCE++S+ +S + +VENI   + RLEV SPG+DRP+  +++F R
Sbjct: 29  LLRVTIDRVDG-VRIEDCEQVSRQLSHVYEVENI--DYKRLEVGSPGVDRPLRNEAEFRR 85

Query: 112 WNGHVV 117
           + G  +
Sbjct: 86  FAGERI 91


>gi|149277311|ref|ZP_01883453.1| hypothetical protein PBAL39_10486 [Pedobacter sp. BAL39]
 gi|149232188|gb|EDM37565.1| hypothetical protein PBAL39_10486 [Pedobacter sp. BAL39]
          Length = 154

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 77/136 (56%), Gaps = 8/136 (5%)

Query: 41  VQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGID 100
           V++ +L    L+  I V+ D+G ++++DC  +S+ +   L+ EN IE  Y LEVSSPG+ 
Sbjct: 24  VEVKMLPNNKLI--IHVDGDEG-ISIQDCAAISRHVGFHLEEENTIEKAYNLEVSSPGVG 80

Query: 101 RPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE-KEKRGEKDMNELQ 159
            P+  K  + +  G  V+ +  LS G+ ++  GK++   + G  +E K K   K    ++
Sbjct: 81  EPLKLKRQYDKNIGREVSVK--LSGGEVKE--GKLLSVDDKGIIIEAKVKEKGKKAQLVE 136

Query: 160 IAISFDSLLSARLIVT 175
            ++ F+S+   +++++
Sbjct: 137 TSVDFNSITETKVLIS 152


>gi|154174423|ref|YP_001408783.1| hypothetical protein CCV52592_0357 [Campylobacter curvus 525.92]
 gi|259585735|sp|A7GZZ1|RIMP_CAMC5 RecName: Full=Ribosome maturation factor rimP
 gi|112802245|gb|EAT99589.1| protein conserved hypothetical protein [Campylobacter curvus
           525.92]
          Length = 138

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I++ ++ G ++L DCE++S+ +SPI DVE  I G Y LEVSSPG++R +     F  
Sbjct: 28  IYRIYITKN-GGVSLDDCEKVSRLLSPIFDVEPPISGDYNLEVSSPGLERKLSEARHFKA 86

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
             G +V  +       + K  G+++   +    LE ++
Sbjct: 87  SLGELVKAQTA-----EAKFAGRLVKADDESIALENDE 119


>gi|313115475|ref|ZP_07800940.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622185|gb|EFQ05675.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 161

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 2/104 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++++P +E M  R   +   +E  +  L++ +++D G M    C ++S A+ PILD  
Sbjct: 13  VEALVRPTVEGMGLRLWDVVFEKEGPDWYLRVLIDKD-GTMDTDTCADVSHALDPILDEA 71

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           + I+  Y LEV SPG+ R + R   +    G  +  +++  + D
Sbjct: 72  DPIDQSYYLEVGSPGLGRKLTRPEHYEALKGQKIRVKLIRPNAD 115


>gi|289522944|ref|ZP_06439798.1| hypothetical protein HMPREF1705_00858 [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503487|gb|EFD24651.1| hypothetical protein HMPREF1705_00858 [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 161

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 8/128 (6%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV-ENIIEGHYRLEVSSPGIDRPMVR 105
           E   ++L+I++    G + ++DCE +S+ +   LD  E I  G Y LEVSSPG+D P+  
Sbjct: 34  EHGRMILRIYINTP-GGINVKDCETVSRKVDKFLDSREEIFGGRYYLEVSSPGLDAPLFY 92

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
             DF  + G  V  +     G ++   GKI+            K G  D  E  I I F 
Sbjct: 93  IKDFKNYVGKTVRIKTHDPVGSRRNFKGKIIEILSNNDI----KLGLDDGTE--ILIPFQ 146

Query: 166 SLLSARLI 173
           ++  ARL+
Sbjct: 147 NISKARLV 154


>gi|259585815|sp|A4G7S9|RIMP_HERAR RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 2/55 (3%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           D G++T+ DCE+++  +  +L VEN    + RLEVSSPG+DRP+ + SD++R+ G
Sbjct: 41  DKGSITVEDCEKVTHQLLHVLTVENA--NYERLEVSSPGLDRPLKKLSDYVRFAG 93


>gi|152981795|ref|YP_001354187.1| hypothetical protein mma_2497 [Janthinobacterium sp. Marseille]
 gi|151281872|gb|ABR90282.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 170

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 57/95 (60%), Gaps = 9/95 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISPI 79
           +S++I+  +  M +  V     +    L+++F++      D G +T+ DCE+++  +  +
Sbjct: 12  LSALIEKTVVGMGYELVNFE--QAARGLVRVFIDFTPEDADKGAITVEDCEKVTHQLLHV 69

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           L VEN    + RLEVSSPG+DRP+ + SD++R+ G
Sbjct: 70  LTVEN--ANYERLEVSSPGLDRPLKKLSDYVRFAG 102


>gi|254252538|ref|ZP_04945856.1| hypothetical protein BDAG_01771 [Burkholderia dolosa AUO158]
 gi|124895147|gb|EAY69027.1| hypothetical protein BDAG_01771 [Burkholderia dolosa AUO158]
          Length = 152

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G ++L DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-ISLDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G  V+  +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|206559871|ref|YP_002230635.1| hypothetical protein BCAL1505 [Burkholderia cenocepacia J2315]
 gi|226734182|sp|B4E7K9|RIMP_BURCJ RecName: Full=Ribosome maturation factor rimP
 gi|198035912|emb|CAR51804.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 152

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G ++L DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-ISLDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G  V+  +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|56707227|ref|YP_169123.1| hypothetical protein FTT_0048 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669697|ref|YP_666254.1| hypothetical protein FTF0048 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115315430|ref|YP_764153.1| hypothetical protein FTH_1748 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|169656764|ref|YP_001429349.2| hypothetical protein FTA_1918 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254375032|ref|ZP_04990512.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|254874066|ref|ZP_05246776.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81598096|sp|Q5NIL9|RIMP_FRATT RecName: Full=Ribosome maturation factor rimP
 gi|122324584|sp|Q0BK68|RIMP_FRATO RecName: Full=Ribosome maturation factor rimP
 gi|123169692|sp|Q14K22|RIMP_FRAT1 RecName: Full=Ribosome maturation factor rimP
 gi|189030342|sp|A7NEJ0|RIMP_FRATF RecName: Full=Ribosome maturation factor rimP
 gi|56603719|emb|CAG44681.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320030|emb|CAL08064.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115130329|gb|ABI83516.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|151572750|gb|EDN38404.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|164551832|gb|ABU62393.2| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254840065|gb|EET18501.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 152

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 53/81 (65%), Gaps = 1/81 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ IS + 
Sbjct: 4   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEISAVF 62

Query: 81  DVENIIEGHYRLEVSSPGIDR 101
           DVE+ + G Y LEVSSPG++R
Sbjct: 63  DVEDPVSGKYILEVSSPGMNR 83


>gi|168492709|ref|ZP_02716852.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|183576817|gb|EDT97345.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
          Length = 159

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  +E   +  K   ++  ++   + L+ +L
Sbjct: 128 DGLTMEYMDKTRKKTVQIPYSLVSKARLAVKL 159


>gi|89257074|ref|YP_514436.1| hypothetical protein FTL_1811 [Francisella tularensis subsp.
           holarctica LVS]
 gi|118498224|ref|YP_899274.1| hypothetical protein FTN_1662 [Francisella tularensis subsp.
           novicida U112]
 gi|134301262|ref|YP_001121230.1| hypothetical protein FTW_0124 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|167009461|ref|ZP_02274392.1| hypothetical protein Ftulh_01737 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|194324408|ref|ZP_03058181.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208780251|ref|ZP_03247593.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|224456288|ref|ZP_03664761.1| hypothetical protein FtultM_00215 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|290954350|ref|ZP_06558971.1| hypothetical protein FtulhU_09047 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312214|ref|ZP_06803014.1| hypothetical protein FtulhU_09034 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122500220|sp|Q2A1G6|RIMP_FRATH RecName: Full=Ribosome maturation factor rimP
 gi|226696298|sp|A4IW08|RIMP_FRATW RecName: Full=Ribosome maturation factor rimP
 gi|226736401|sp|A0Q8F5|RIMP_FRATN RecName: Full=Ribosome maturation factor rimP
 gi|89144905|emb|CAJ80250.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|118424130|gb|ABK90520.1| conserved protein of unknown function [Francisella novicida U112]
 gi|134049039|gb|ABO46110.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|194321473|gb|EDX18958.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208743900|gb|EDZ90202.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|282158335|gb|ADA77726.1| hypothetical protein NE061598_00270 [Francisella tularensis subsp.
           tularensis NE061598]
 gi|332678960|gb|AEE88089.1| clustered with transcription termination protein NusA [Francisella
           cf. novicida Fx1]
          Length = 150

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 53/81 (65%), Gaps = 1/81 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ IS + 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEISAVF 60

Query: 81  DVENIIEGHYRLEVSSPGIDR 101
           DVE+ + G Y LEVSSPG++R
Sbjct: 61  DVEDPVSGKYILEVSSPGMNR 81


>gi|332665271|ref|YP_004448059.1| ribosome maturation factor rimP [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334085|gb|AEE51186.1| Ribosome maturation factor rimP [Haliscomenobacter hydrossis DSM
           1100]
          Length = 158

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSV-QISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I +++Q   +E  F     I + +E    L++FV+ D G M    C+ +S+ +   LD  
Sbjct: 6   IEALLQEKYQEPEFADCFTIEIKQEGGNRLEVFVDSDSG-MQFEKCQRISRFLEAHLDTN 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             +   Y LEVSSPGI+RP+     +LR  G     E+ LS+G+ +   G +   +    
Sbjct: 65  GWLGEVYTLEVSSPGIERPLKFARQYLRNIGRTF--EVRLSAGETK--TGVLKAVNPESI 120

Query: 144 FLEKE---KRGEKDMN-ELQIAISFDSLLSA 170
            LE+E   K G+K+M   +Q  I F+ +  A
Sbjct: 121 VLEEEIKWKEGKKNMKGTVQTVIPFEHIAKA 151


>gi|302387321|ref|YP_003823143.1| protein of unknown function DUF150 [Clostridium saccharolyticum
           WM1]
 gi|302197949|gb|ADL05520.1| protein of unknown function DUF150 [Clostridium saccharolyticum
           WM1]
          Length = 155

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 31  PVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P+++E  F  V +  ++E  +  L+ +++++ G +T+ DCE +S+ +   LD ++ I   
Sbjct: 17  PLMKENHFELVDVEYVKEAGSWYLRAYIDKE-GGITVDDCETISRRLGDWLDEKDFIADS 75

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LEVSSPG+ RP+ +  DF R  G  V  ++      ++   G +         + +E 
Sbjct: 76  YILEVSSPGLGRPLKKDKDFNRSIGKEVDIKLYKPLNKQKDFTGTLTSYDRETVTITQED 135

Query: 150 RGEKDMNELQIAI 162
             E  +N  +IA+
Sbjct: 136 GIELVLNRPEIAL 148


>gi|294101967|ref|YP_003553825.1| protein of unknown function DUF150 [Aminobacterium colombiense DSM
           12261]
 gi|293616947|gb|ADE57101.1| protein of unknown function DUF150 [Aminobacterium colombiense DSM
           12261]
          Length = 159

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 69/116 (59%), Gaps = 7/116 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-V 82
           +S+ ++ ++E + +  V +   +E KNL ++++++   G +T++DCE +S+++S  LD  
Sbjct: 11  LSASLRQIVESLGYECVGVVFAQESKNLYVKVYIDVL-GGITVKDCETVSRSLSRYLDEN 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA--CEIVLSSGDKQKLIGKIM 136
           ++ +   Y LEV S G+DRP+    D+ R+ G  V   C+ ++    +++  G I+
Sbjct: 70  DSALPDRYFLEVGSAGLDRPLFSLDDYARFAGKKVKIRCQTLVEG--RKRFTGTIL 123


>gi|251772258|gb|EES52828.1| conserved protein of unknown function [Leptospirillum
           ferrodiazotrophum]
          Length = 171

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 32  VIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           +++ M      + L ++   +L++FV+  +G +T+   E +S+ +S +LDV +   G Y 
Sbjct: 20  LLDSMGLTLYDLVLPKKSGGVLRVFVDGPEG-VTIDQIESVSRRVSVLLDVLDPFPGRYH 78

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           LEVSSPG+DR +    D  +  G  V+ ++V +   ++ L G+I    + GFFL
Sbjct: 79  LEVSSPGLDRLLKIPEDLRKNEGKWVSLKLVDAIEGQKVLKGRIGSVGDAGFFL 132


>gi|134095612|ref|YP_001100687.1| hypothetical protein HEAR2435 [Herminiimonas arsenicoxydans]
 gi|133739515|emb|CAL62566.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 172

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 2/55 (3%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           D G++T+ DCE+++  +  +L VEN    + RLEVSSPG+DRP+ + SD++R+ G
Sbjct: 52  DKGSITVEDCEKVTHQLLHVLTVENA--NYERLEVSSPGLDRPLKKLSDYVRFAG 104


>gi|317133696|ref|YP_004093010.1| protein of unknown function DUF150 [Ethanoligenens harbinense
           YUAN-3]
 gi|315471675|gb|ADU28279.1| protein of unknown function DUF150 [Ethanoligenens harbinense
           YUAN-3]
          Length = 165

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++  PV E +      I  ++E  +  L+I++++D G + + DCE  S+AI   LD  
Sbjct: 11  VEALALPVAETLGLSIWDIEYVKEGASWFLRIYIDKD-GGVGIEDCEAFSRAIDGPLDEA 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           ++I   Y LEVSSPGI+R + R + F  + G  V   ++
Sbjct: 70  DLIPQQYYLEVSSPGIERELKRDAHFQAFIGKKVHVRLI 108


>gi|325142813|gb|EGC65184.1| hypothetical protein NMB9615945_0622 [Neisseria meningitidis
           961-5945]
          Length = 109

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G +T+ DC  +S  +S +  VE+I   +  LE+SSPG+DRP+ + +DF+R+ G     +
Sbjct: 2   EGGITVEDCATVSNHLSRVFMVEDI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIK 59

Query: 121 IVLSSGDKQKLIGKIMG 137
             L    ++  IGKI G
Sbjct: 60  TRLPIDGQKNFIGKIEG 76


>gi|312796185|ref|YP_004029107.1| hypothetical protein RBRH_03643 [Burkholderia rhizoxinica HKI 454]
 gi|312167960|emb|CBW74963.1| Hypothetical cytosolic protein [Burkholderia rhizoxinica HKI 454]
          Length = 216

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 53/82 (64%), Gaps = 3/82 (3%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L++F+++  G + + DCE++++ +  +L VENI   + RLEVSSPG+DRP+ +++DF R
Sbjct: 92  MLRVFIDQPAG-IAIDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKRADFER 148

Query: 112 WNGHVVACEIVLSSGDKQKLIG 133
           + G  V   +    G ++   G
Sbjct: 149 FAGSEVMVTLKQPLGGRKSFRG 170


>gi|257453567|ref|ZP_05618857.1| hypothetical protein ENHAE0001_1621 [Enhydrobacter aerosaccus SK60]
 gi|257449025|gb|EEV23978.1| hypothetical protein ENHAE0001_1621 [Enhydrobacter aerosaccus SK60]
          Length = 169

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 80/162 (49%), Gaps = 14/162 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDG-NMTLRDCEELSQA 75
            +++ +I+P +         I  + + +  LL+I++E     R +G  +T+ DC  ++  
Sbjct: 8   AELTQIIEPAVTACDVSLWGIEFVPQGRRSLLRIYIEALPEDRAEGKQVTIEDCAAVTHQ 67

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD----KQKL 131
           +  +LD+ + I G Y LEVSSPG+DR          + G  ++  ++ + G     ++K+
Sbjct: 68  VGGVLDLHDPIAGEYLLEVSSPGLDRAFFSAEQLHDYVGQTISLRLIHAIGQGSDKRRKV 127

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            G+++   E    ++ E      +N+  +AI  D++  A L+
Sbjct: 128 TGELVNIDERQLTVKTEN---DQVNDQLLAIELDNIDKANLV 166


>gi|332670043|ref|YP_004453051.1| hypothetical protein Celf_1529 [Cellulomonas fimi ATCC 484]
 gi|332339081|gb|AEE45664.1| protein of unknown function DUF150 [Cellulomonas fimi ATCC 484]
          Length = 193

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 41/65 (63%)

Query: 58  ERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           E D+G + L    E+++A+S  LD ++++ G Y LEVSSPG+ RP+ ++  F R  G  V
Sbjct: 47  EDDEGELDLDRVAEVTRAVSDALDAQDVVAGEYTLEVSSPGVSRPLTQRRHFARAVGRSV 106

Query: 118 ACEIV 122
           +  +V
Sbjct: 107 SVRLV 111


>gi|262377016|ref|ZP_06070242.1| UPF0090 protein [Acinetobacter lwoffii SH145]
 gi|262308054|gb|EEY89191.1| UPF0090 protein [Acinetobacter lwoffii SH145]
          Length = 174

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 18/132 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-----------DDG------NMTL 66
           +  +I P +E  +     I  L + K  LL+I++++           +DG       + +
Sbjct: 10  LQDLIAPAVEACNVNLWGIEFLPQGKCSLLRIYIDKPVDESVAPAINEDGEEEQGRGIGV 69

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + GH VA  ++ +  
Sbjct: 70  QDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQMSGYIGHTVALRLISAVD 129

Query: 127 DKQKLIGKIMGT 138
           +++K   K++  
Sbjct: 130 NRRKFQAKLVAV 141


>gi|62263138|gb|AAX78134.1| unknown protein [synthetic construct]
          Length = 187

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 53/81 (65%), Gaps = 1/81 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ IS + 
Sbjct: 30  LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEISAVF 88

Query: 81  DVENIIEGHYRLEVSSPGIDR 101
           DVE+ + G Y LEVSSPG++R
Sbjct: 89  DVEDPVSGKYILEVSSPGMNR 109


>gi|259645132|sp|Q10XM0|RIMP_TRIEI RecName: Full=Ribosome maturation factor rimP
          Length = 153

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L++ +     +  L DCE +S AI   LD  NII   Y LE+SSPGI + +    DF+ 
Sbjct: 37  ILRLDIRHPHQDTGLDDCERMSNAIGEQLDAANIIPEPYLLEISSPGISKFLDNDRDFIA 96

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
           + G  VA         K   IG+++   +T  ++ ++ R
Sbjct: 97  FKGFNVAVNTSEPYKGKNYWIGQLVSRDQTAVYINQKGR 135


>gi|259016312|sp|Q3IJ55|RIMP_PSEHT RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+ +++ P +E + F    +  ++  ++  L++++  + G +++ +C + S+ IS I
Sbjct: 4   LEQDLVAMLTPAVEMLGFELHGLEFVQAGRHSTLRVYITHEAG-ISVDNCADASRQISAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DR + ++  + +  G  V     L    ++   G ++  +
Sbjct: 63  LDVEDPITNEYDLEVSSPGVDRLLFKQDHYEQAQGEEVQLRTKLPQDGRRNFKGDLIAVT 122


>gi|319778228|ref|YP_004129141.1| transcription termination protein NusA [Taylorella equigenitalis
           MCE9]
 gi|317108252|gb|ADU90998.1| transcription termination protein NusA [Taylorella equigenitalis
           MCE9]
          Length = 171

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 3/66 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++ ++ D G +T+ DCEE+S+ +S I +VE++   + RLEV SPG DRP+ ++ DF R
Sbjct: 29  LLRVTIDIDRG-ITIEDCEEVSRLLSRIYEVEDV--DYARLEVGSPGTDRPLKKEDDFHR 85

Query: 112 WNGHVV 117
           + G  V
Sbjct: 86  FAGQRV 91


>gi|297617184|ref|YP_003702343.1| hypothetical protein Slip_0999 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145021|gb|ADI01778.1| protein of unknown function DUF150 [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 153

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 6/114 (5%)

Query: 29  IQPVIE-EMSFRSVQISLLEEKN----LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++P+IE E+    + +  ++ KN     +LQ+F+++  G + L  C++ S+ I   LD E
Sbjct: 10  VEPIIERELEPVGIDVVDVQYKNQAGRWVLQVFIDKP-GGVDLDTCQQASEIIGRALDWE 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + I   Y LEVSSPG+DR + +  DF R+ G  V  ++     +++   G ++G
Sbjct: 69  DPIPHSYVLEVSSPGLDRVLKKDKDFERFTGKKVTVKVREPINNQKNFKGLLLG 122


>gi|330963973|gb|EGH64233.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 152

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LDVE
Sbjct: 8   LQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I   Y LEVSSPG++RP+     F  + G  V
Sbjct: 67  DPISTEYTLEVSSPGMERPLFTIEQFASYAGEQV 100


>gi|227551757|ref|ZP_03981806.1| protein of hypothetical function DUF150 [Enterococcus faecium
           TX1330]
 gi|257887082|ref|ZP_05666735.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257895647|ref|ZP_05675300.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|257898237|ref|ZP_05677890.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|293377742|ref|ZP_06623931.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
 gi|293570614|ref|ZP_06681665.1| hypothetical protein EfmE980_0412 [Enterococcus faecium E980]
 gi|227179062|gb|EEI60034.1| protein of hypothetical function DUF150 [Enterococcus faecium
           TX1330]
 gi|257823136|gb|EEV50068.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257832212|gb|EEV58633.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|257836149|gb|EEV61223.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|291609285|gb|EFF38556.1| hypothetical protein EfmE980_0412 [Enterococcus faecium E980]
 gi|292643742|gb|EFF61863.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
          Length = 157

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 65/109 (59%), Gaps = 5/109 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ P+++E  F  V++  ++E K+  L++F++++ G + + +C  +S+ +S  LD  
Sbjct: 8   VTEMVTPILDEQHFELVEVEFVKEGKSWFLRVFIDKE-GGIDIEECAFVSEKLSEKLDAA 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQ 129
             + I   Y LEVSSPG +RP+ ++SD+ +  G  V   +     G+KQ
Sbjct: 67  DPDPIPQAYFLEVSSPGAERPLKKESDYEKALGDYVHVSLYQPVDGEKQ 115


>gi|330877235|gb|EGH11384.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 152

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LDVE
Sbjct: 8   LQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I   Y LEVSSPG++RP+     F  + G  V
Sbjct: 67  DPISTEYTLEVSSPGMERPLFTIEQFASYAGEQV 100


>gi|329736175|gb|EGG72447.1| hypothetical protein SEVCU028_0396 [Staphylococcus epidermidis
           VCU028]
          Length = 114

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++IQPV+ +++F  V I  ++E K+  L+I ++++ G + L DC   S+ IS ++D  
Sbjct: 8   VEALIQPVLNDLNFELVDIEYVKEGKDHFLRISIDKE-GGVDLNDCTIASEKISEVMDEN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + I   Y L+V+SPG +RP+ +K  F+
Sbjct: 67  DPIPEMYYLDVASPGAERPIKKKKIFI 93


>gi|113477416|ref|YP_723477.1| hypothetical protein Tery_3979 [Trichodesmium erythraeum IMS101]
 gi|110168464|gb|ABG53004.1| protein of unknown function DUF150 [Trichodesmium erythraeum
           IMS101]
          Length = 172

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L++ +     +  L DCE +S AI   LD  NII   Y LE+SSPGI + +    DF+ 
Sbjct: 56  ILRLDIRHPHQDTGLDDCERMSNAIGEQLDAANIIPEPYLLEISSPGISKFLDNDRDFIA 115

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
           + G  VA         K   IG+++   +T  ++ ++ R
Sbjct: 116 FKGFNVAVNTSEPYKGKNYWIGQLVSRDQTAVYINQKGR 154


>gi|237798561|ref|ZP_04587022.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|237803808|ref|ZP_04591393.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|237805250|ref|ZP_04591954.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021414|gb|EGI01471.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331025788|gb|EGI05844.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331026358|gb|EGI06413.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 152

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LDVE
Sbjct: 8   LQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG++RP+     F  + G  V  ++
Sbjct: 67  DPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKL 104


>gi|257482263|ref|ZP_05636304.1| hypothetical protein PsyrptA_03277 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289624600|ref|ZP_06457554.1| hypothetical protein PsyrpaN_05581 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|298488454|ref|ZP_07006485.1| 30S ribosomal subunit maturation factor [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|302185430|ref|ZP_07262103.1| hypothetical protein Psyrps6_03769 [Pseudomonas syringae pv.
           syringae 642]
 gi|298157079|gb|EFH98168.1| 30S ribosomal subunit maturation factor [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322530|gb|EFW78623.1| hypothetical protein PsgB076_21417 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330001|gb|EFW85988.1| hypothetical protein PsgRace4_10252 [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330868244|gb|EGH02953.1| ribosome maturation protein RimP [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330875222|gb|EGH09371.1| ribosome maturation protein RimP [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330888660|gb|EGH21321.1| ribosome maturation protein RimP [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330895307|gb|EGH27645.1| ribosome maturation protein RimP [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330937944|gb|EGH41731.1| ribosome maturation protein RimP [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330950307|gb|EGH50567.1| ribosome maturation protein RimP [Pseudomonas syringae Cit 7]
 gi|330969649|gb|EGH69715.1| ribosome maturation protein RimP [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330981088|gb|EGH79191.1| ribosome maturation protein RimP [Pseudomonas syringae pv. aptata
           str. DSM 50252]
 gi|330987053|gb|EGH85156.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011497|gb|EGH91553.1| ribosome maturation protein RimP [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 152

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LDVE
Sbjct: 8   LQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG++RP+     F  + G  V  ++
Sbjct: 67  DPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKL 104


>gi|66047409|ref|YP_237250.1| hypothetical protein Psyr_4182 [Pseudomonas syringae pv. syringae
           B728a]
 gi|71733923|ref|YP_276313.1| hypothetical protein PSPPH_4191 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289676022|ref|ZP_06496912.1| hypothetical protein PsyrpsF_22296 [Pseudomonas syringae pv.
           syringae FF5]
 gi|34223096|sp|P95578|RIMP_PSEU2 RecName: Full=Ribosome maturation factor rimP
 gi|91208357|sp|Q48E75|RIMP_PSE14 RecName: Full=Ribosome maturation factor rimP
 gi|1835603|gb|AAC45133.1| 15 kDa protein [Pseudomonas syringae pv. syringae]
 gi|63258116|gb|AAY39212.1| Protein of unknown function DUF150 [Pseudomonas syringae pv.
           syringae B728a]
 gi|71554476|gb|AAZ33687.1| YhbC-like protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 158

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LDVE
Sbjct: 14  LQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLDVE 72

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG++RP+     F  + G  V  ++
Sbjct: 73  DPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKL 110


>gi|172057850|ref|YP_001814310.1| hypothetical protein Exig_1841 [Exiguobacterium sibiricum 255-15]
 gi|226696098|sp|B1YI66|RIMP_EXIS2 RecName: Full=Ribosome maturation factor rimP
 gi|171990371|gb|ACB61293.1| protein of unknown function DUF150 [Exiguobacterium sibiricum
           255-15]
          Length = 155

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + +P++E      V +  ++E  +  L++ +++D G + L DC  +++ +S  L+ +
Sbjct: 8   VEQLAKPIVEREGMELVDVEFVKEGADWFLRVSIDKD-GGVDLEDCVNINEKLSEALNQD 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+  Y L+V+SPG +RP+ +  DF +  G  V  +      D  +  G ++  SE   
Sbjct: 67  DPIDEPYYLDVASPGAERPLKKTEDFEKAIGKHVYIKTHDPVKDATEFEGTLLTYSEEML 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE   +  K    L+I I  + +  ARL V
Sbjct: 127 ELEVRVKTRK----LKIEIPVNKIAMARLAV 153


>gi|330958051|gb|EGH58311.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 152

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LDVE
Sbjct: 8   LQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG++RP+     F  + G  V  ++
Sbjct: 67  DPITTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKL 104


>gi|115351433|ref|YP_773272.1| hypothetical protein Bamb_1380 [Burkholderia ambifaria AMMD]
 gi|170700024|ref|ZP_02891049.1| protein of unknown function DUF150 [Burkholderia ambifaria
           IOP40-10]
 gi|171317090|ref|ZP_02906293.1| protein of unknown function DUF150 [Burkholderia ambifaria MEX-5]
 gi|172060472|ref|YP_001808124.1| hypothetical protein BamMC406_1420 [Burkholderia ambifaria MC40-6]
 gi|122323374|sp|Q0BFY5|RIMP_BURCM RecName: Full=Ribosome maturation factor rimP
 gi|226734154|sp|B1YP34|RIMP_BURA4 RecName: Full=Ribosome maturation factor rimP
 gi|115281421|gb|ABI86938.1| protein of unknown function DUF150 [Burkholderia ambifaria AMMD]
 gi|170135083|gb|EDT03386.1| protein of unknown function DUF150 [Burkholderia ambifaria
           IOP40-10]
 gi|171097724|gb|EDT42551.1| protein of unknown function DUF150 [Burkholderia ambifaria MEX-5]
 gi|171992989|gb|ACB63908.1| protein of unknown function DUF150 [Burkholderia ambifaria MC40-6]
          Length = 152

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G ++L DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQLAG-ISLEDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G  V+  +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFEGKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|297562527|ref|YP_003681501.1| hypothetical protein Ndas_3595 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846975|gb|ADH68995.1| protein of unknown function DUF150 [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 160

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 7/126 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ +++PV+ E       + L    K  +L++ V+ D+G + L    E+SQ ++ +LD  
Sbjct: 10  IAELLEPVLAEAGLDLEAVELTPAGKRRVLRVVVDSDNG-VDLDTVGEVSQEVNTLLDSS 68

Query: 84  NIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +++    Y LEV+SPG+DRP+ +   + R  G +V    + S  +  K+ G++ G  + G
Sbjct: 69  DVMGAQPYVLEVTSPGVDRPLTQPRHWRRSRGRLV----IASLAEGGKVTGRVTGADDDG 124

Query: 143 FFLEKE 148
             L+ E
Sbjct: 125 VTLDVE 130


>gi|145593915|ref|YP_001158212.1| hypothetical protein Strop_1367 [Salinispora tropica CNB-440]
 gi|259586196|sp|A4X4N4|RIMP_SALTO RecName: Full=Ribosome maturation factor rimP
 gi|145303252|gb|ABP53834.1| protein of unknown function DUF150 [Salinispora tropica CNB-440]
          Length = 220

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 17/150 (11%)

Query: 14  RIFGDMGLAGDISS-------VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMT 65
           R  G +   GD++S       V++PV+ E  +   ++S+    +  ++Q+ V+  DG + 
Sbjct: 24  RSAGRVSRGGDLASRRARLHEVVEPVVGEAGYDLEELSISRAGRRHVVQVIVD-ADGGID 82

Query: 66  LRDCEELSQAISPILDVE-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           L    ++S+A+S  LD       +I+ G Y+LEVSSPG+ RP+     + R  G +V   
Sbjct: 83  LDAVADVSRAVSAALDAAEEARGDIVAGEYQLEVSSPGVSRPLTLPRHWRRNAGRLVRVT 142

Query: 121 IV--LSSGDKQKLIGKIMGTSETGFFLEKE 148
           +     +GD+Q L G+++   +    LE +
Sbjct: 143 VRGGPDAGDRQ-LTGRVVEADDEQVVLETD 171


>gi|257865908|ref|ZP_05645561.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257872241|ref|ZP_05651894.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257875535|ref|ZP_05655188.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257799842|gb|EEV28894.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257806405|gb|EEV35227.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257809701|gb|EEV38521.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 157

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 64/109 (58%), Gaps = 5/109 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ P+++   F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  LD  
Sbjct: 8   VTDIVTPILDAQKFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEQLSEQLDQC 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQ 129
             + I   Y LEVSSPG +RP+ +++D+ R  G  +   +     G+KQ
Sbjct: 67  EPDPIPQAYFLEVSSPGAERPLKKEADYQRAVGEYIHVSLYQPIDGEKQ 115


>gi|325847928|ref|ZP_08170099.1| hypothetical protein HMPREF9246_0391 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480797|gb|EGC83851.1| hypothetical protein HMPREF9246_0391 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 146

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +   ++  I  + +  V I  + E KN +L+ F+ +D G +T+ DCE+ S  +S
Sbjct: 1   MDLISKLKENLESDINNLGYELVDIEFVTEGKNKILRFFIYKD-GGITIDDCEKTSNLLS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSSP + RP+    D  R    ++  E+ L +G  +K +  I  
Sbjct: 60  ERLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELL--EVKLKNG--EKFLANIEE 115

Query: 138 TSETGFFLEKEK-RGEKDMNELQ 159
             E     + E  + E D NE++
Sbjct: 116 IKEDSLVFKCEDGQKEVDKNEIK 138


>gi|291166363|gb|EFE28409.1| hypothetical protein HMPREF0389_00324 [Filifactor alocis ATCC
           35896]
          Length = 152

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 58/90 (64%), Gaps = 1/90 (1%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L++FV++D G + + +  ++++ ++ +LD ++ I+  Y LEVS+PG+ R + ++ DF+R 
Sbjct: 37  LRVFVDKD-GGLDIDEISDITRVLNKLLDEKDPIQQQYFLEVSTPGLGRALKKERDFIRE 95

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +G  +  ++      +++L G ++G  ETG
Sbjct: 96  SGKEIELKLYQPVNGQKELSGVLIGLDETG 125


>gi|224543311|ref|ZP_03683850.1| hypothetical protein CATMIT_02511 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523844|gb|EEF92949.1| hypothetical protein CATMIT_02511 [Catenibacterium mitsuokai DSM
           15897]
          Length = 153

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 31  PVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P+I         +  ++EK    L++F+E++DGN+ +  C  +S+A+S  LD  ++I+  
Sbjct: 11  PIIASFECHLDSMEYVKEKGEWYLRVFIEKNDGNLDMDTCVAVSEAVSEKLDELDLIKDE 70

Query: 90  YRLEVSSPGIDRPM 103
           Y LEVSSPGI++P+
Sbjct: 71  YYLEVSSPGIEKPL 84


>gi|255994862|ref|ZP_05427997.1| conserved hypothetical protein [Eubacterium saphenum ATCC 49989]
 gi|255993575|gb|EEU03664.1| conserved hypothetical protein [Eubacterium saphenum ATCC 49989]
          Length = 187

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 4/101 (3%)

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           +C  +S+AIS  LD  +II+ +Y LEVS+PGIDR + +  DF+R+ G  V   +      
Sbjct: 87  ECTAISEAISEYLDKNDIIDNNYYLEVSTPGIDRELKKDIDFIRFKGRSVDISLYKRIDG 146

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGE----KDMNELQIAISF 164
           +++  G ++  ++ G  +E ++  +     D+ ++ +AI F
Sbjct: 147 QKEYRGTLIEKNDEGIAVEVDESTKVFSNNDVAKVNLAIEF 187


>gi|229918665|ref|YP_002887311.1| hypothetical protein EAT1b_2952 [Exiguobacterium sp. AT1b]
 gi|259585773|sp|C4L660|RIMP_EXISA RecName: Full=Ribosome maturation factor rimP
 gi|229470094|gb|ACQ71866.1| protein of unknown function DUF150 [Exiguobacterium sp. AT1b]
          Length = 156

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 6/152 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + S+  P++E  +   V +  ++E  +  L++++++  G + L DC  +++ +S  L+  
Sbjct: 8   VESIALPIVERENMELVDVEFVKEGPDWFLRVYIDKP-GGVDLDDCVNINEQLSEKLNET 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + IE  Y L+VSSPG +RP+ + SDF R  G  V  +        ++  G +        
Sbjct: 67  DPIEQAYYLDVSSPGAERPLKKPSDFERAVGKNVYMKTFAPIDGAKEFEGILTAYDGETV 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            +E   +  K      +++  D +  ARL VT
Sbjct: 127 VIETRIKTRKKA----VSLPVDKIAQARLAVT 154


>gi|259585828|sp|B8FCY3|RIMP_DESAA RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E    +L+++V+++ G +TL DC  +S+ +  +LD        YRLEVSSPG+DRP+ R+
Sbjct: 27  EGGGYILRLYVDKE-GGITLGDCTMVSRYVGDLLDAYADEMPRYRLEVSSPGLDRPLTRE 85

Query: 107 SDFLRWNGHVV 117
             F R+ G   
Sbjct: 86  DHFRRFEGRTA 96


>gi|257126085|ref|YP_003164199.1| hypothetical protein Lebu_1320 [Leptotrichia buccalis C-1013-b]
 gi|257050024|gb|ACV39208.1| protein of unknown function DUF150 [Leptotrichia buccalis C-1013-b]
          Length = 163

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 3/101 (2%)

Query: 53  LQIFVERDDGNMT-LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           L+++VE++DG+ T L DC + S+ I  + D  ++I+  + LEVS+PG++R + +  DFLR
Sbjct: 37  LRVYVEKEDGSTTTLDDCIDFSREIDGVAD--DLIDEKFFLEVSTPGVERRLKKPKDFLR 94

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE 152
           + G  +  +   +    +K +GK+        FL  E  G+
Sbjct: 95  FLGEKINVQAKSNIDGAKKFLGKLEKFENDTIFLLDENLGK 135


>gi|194467744|ref|ZP_03073730.1| protein of unknown function DUF150 [Lactobacillus reuteri 100-23]
 gi|194452597|gb|EDX41495.1| protein of unknown function DUF150 [Lactobacillus reuteri 100-23]
          Length = 157

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 14/156 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-V 82
           ++ ++ P++++  F    +  ++E K+  L++++++D G +TL DC  +S  +S  LD V
Sbjct: 8   VTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYIDKD-GGITLEDCALVSDELSEALDNV 66

Query: 83  E-NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE- 140
           E + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G +   S+ 
Sbjct: 67  EPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKIYEGTLTQLSDK 126

Query: 141 --TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             T  +L+K +         QI I    +  ARL +
Sbjct: 127 EITLDYLDKTRHR-------QITIDRQKIAQARLAI 155


>gi|134295572|ref|YP_001119307.1| hypothetical protein Bcep1808_1464 [Burkholderia vietnamiensis G4]
 gi|166979856|sp|A4JDW9|RIMP_BURVG RecName: Full=Ribosome maturation factor rimP
 gi|134138729|gb|ABO54472.1| protein of unknown function DUF150 [Burkholderia vietnamiensis G4]
          Length = 152

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G ++L DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-ISLDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK-RGEKDMNELQIAISFDSLLSA 170
           + G  V+  +      ++   G +   +     LE E+ +GE  M +  +A     +  A
Sbjct: 85  FAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFERNKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|313681591|ref|YP_004059329.1| hypothetical protein Sulku_0462 [Sulfuricurvum kujiense DSM 16994]
 gi|313154451|gb|ADR33129.1| protein of unknown function DUF150 [Sulfuricurvum kujiense DSM
           16994]
          Length = 143

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E +N + ++ V    G ++L  C E +  ISP+LDV   + G YRLEVSSPGI+R +   
Sbjct: 26  ENENTIFRVSV-TAPGGVSLDQCVEATHLISPLLDVTPPVGGEYRLEVSSPGIERKLKTL 84

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             F +  G     ++V S+ +K+K  G+++
Sbjct: 85  DHFAQSVGE----KVVFSTVNKEKFDGEVV 110


>gi|229592638|ref|YP_002874757.1| hypothetical protein PFLU5255 [Pseudomonas fluorescens SBW25]
 gi|229364504|emb|CAY52354.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 173

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LDV
Sbjct: 28  ELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLDV 86

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           E+ I   Y LEVSSPG++RP+     F ++ G  V
Sbjct: 87  EDPISVEYTLEVSSPGMERPLFTIDQFAKFAGEQV 121


>gi|28871626|ref|NP_794245.1| hypothetical protein PSPTO_4492 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213966649|ref|ZP_03394800.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301383159|ref|ZP_07231577.1| hypothetical protein PsyrptM_11007 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063406|ref|ZP_07254947.1| hypothetical protein PsyrptK_25769 [Pseudomonas syringae pv. tomato
           K40]
 gi|302133779|ref|ZP_07259769.1| hypothetical protein PsyrptN_20414 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|34222830|sp|Q87WQ3|RIMP_PSESM RecName: Full=Ribosome maturation factor rimP
 gi|28854878|gb|AAO57940.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213928499|gb|EEB62043.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 158

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LDVE
Sbjct: 14  LQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLDVE 72

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I   Y LEVSSPG++RP+     F  + G  V
Sbjct: 73  DPISTEYTLEVSSPGMERPLFTIEQFALYAGEQV 106


>gi|312963085|ref|ZP_07777570.1| hypothetical protein PFWH6_5007 [Pseudomonas fluorescens WH6]
 gi|311282596|gb|EFQ61192.1| hypothetical protein PFWH6_5007 [Pseudomonas fluorescens WH6]
          Length = 173

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LDV
Sbjct: 28  ELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLDV 86

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           E+ I   Y LEVSSPG++RP+     F ++ G  V
Sbjct: 87  EDPISVEYTLEVSSPGMERPLFTIEQFAKFAGEQV 121


>gi|329915248|ref|ZP_08276236.1| clustered with transcription termination protein NusA
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327544953|gb|EGF30294.1| clustered with transcription termination protein NusA
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 161

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 47/68 (69%), Gaps = 7/68 (10%)

Query: 52  LLQIFV-----ERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           LL++++     + + G +T+ DCE+++  +  +L VEN +  + RLEVSSPG+DRP+ + 
Sbjct: 28  LLRVYIDFPPEQAERGMITVEDCEKVTHQLLHVLTVENAV--YERLEVSSPGLDRPLKKL 85

Query: 107 SDFLRWNG 114
           +D+LR+ G
Sbjct: 86  ADYLRFAG 93


>gi|70734335|ref|YP_257975.1| hypothetical protein PFL_0842 [Pseudomonas fluorescens Pf-5]
 gi|91208376|sp|Q4KIF8|RIMP_PSEF5 RecName: Full=Ribosome maturation factor rimP
 gi|68348634|gb|AAY96240.1| 15 kDa protein [Pseudomonas fluorescens Pf-5]
          Length = 158

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 59/98 (60%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+  + +    I    + ++ LL+++++++ G + + DC  +S+ IS +LDVE
Sbjct: 14  LQALLAPVVVALGYECWGIEFSAQGRHSLLRVYIDKE-GGVLVDDCAIVSRQISGVLDVE 72

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG++RP+     F ++ G  V  ++
Sbjct: 73  DPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKL 110


>gi|218782564|ref|YP_002433882.1| hypothetical protein Dalk_4736 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763948|gb|ACL06414.1| protein of unknown function DUF150 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 182

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E    +L+++V+++ G +TL DC  +S+ +  +LD        YRLEVSSPG+DRP+ R+
Sbjct: 57  EGGGYILRLYVDKE-GGITLGDCTMVSRYVGDLLDAYADEMPRYRLEVSSPGLDRPLTRE 115

Query: 107 SDFLRWNGHVV 117
             F R+ G   
Sbjct: 116 DHFRRFEGRTA 126


>gi|333024105|ref|ZP_08452169.1| hypothetical protein STTU_1611 [Streptomyces sp. Tu6071]
 gi|332743957|gb|EGJ74398.1| hypothetical protein STTU_1611 [Streptomyces sp. Tu6071]
          Length = 197

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKS 107
           +  +LQI V+ D G ++L  C ELS+ IS +LD  + + E  Y LEV+SPG DRP+    
Sbjct: 48  RRRVLQIVVDGDSG-VSLDTCAELSREISTVLDDTDAMGENEYVLEVTSPGADRPLTAHR 106

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            ++R  G +V  ++     +  +L+ +++   + G  LE
Sbjct: 107 HYVRATGRLVRFQL----AEGGELVARLLKADDAGLDLE 141


>gi|331016646|gb|EGH96702.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 158

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LDVE
Sbjct: 14  LQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLDVE 72

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           + I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G  E
Sbjct: 73  DPISTEYTLEVSSPGMERPLFTIEQFALYAGEQVRIKLRSPFEGRRNFQGLLRGVEE 129


>gi|330807481|ref|YP_004351943.1| Sm_like superfamily [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375589|gb|AEA66939.1| Conserved hypothetical protein; Sm_like superfamily [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 152

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 58/98 (59%), Gaps = 2/98 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+  + +    I    + ++ LL+++++++ G + + DC  +S+ IS +LDVE
Sbjct: 8   LQALLAPVVVALGYECWGIEFSAQGRHSLLRVYIDKE-GGVLVDDCAIVSRQISGVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           + I   Y LEVSSPG++RP+     F  + G  V  ++
Sbjct: 67  DPITSEYTLEVSSPGMERPLFTLEQFASFAGEQVKIKL 104


>gi|302522223|ref|ZP_07274565.1| conserved hypothetical protein [Streptomyces sp. SPB78]
 gi|318062644|ref|ZP_07981365.1| ribosome maturation protein RimP [Streptomyces sp. SA3_actG]
 gi|318081084|ref|ZP_07988416.1| ribosome maturation protein RimP [Streptomyces sp. SA3_actF]
 gi|302431118|gb|EFL02934.1| conserved hypothetical protein [Streptomyces sp. SPB78]
          Length = 183

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKS 107
           +  +LQI V+ D G ++L  C ELS+ IS +LD  + + E  Y LEV+SPG DRP+    
Sbjct: 34  RRRVLQIVVDGDSG-VSLDTCAELSREISTVLDDTDAMGENEYVLEVTSPGADRPLTAHR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            ++R  G +V  ++     +  +L+ +++   + G  LE
Sbjct: 93  HYVRATGRLVRFQL----AEGGELVARLLKADDAGLDLE 127


>gi|288556946|ref|YP_003428881.1| hypothetical protein BpOF4_19750 [Bacillus pseudofirmus OF4]
 gi|288548106|gb|ADC51989.1| hypothetical protein BpOF4_19750 [Bacillus pseudofirmus OF4]
          Length = 156

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 5/102 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ P+++E++   V +   +E  N  L++F++ D G + L DC ++S+ +S  LD  
Sbjct: 9   VAELVTPLLDELNLELVDVEFKKEGPNWFLRVFIDSDTG-VDLEDCGKVSEQLSEKLDEM 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRW---NGHVVACEIV 122
           + I   Y LEVSSPG +RP+ +  D  +    N HV   E V
Sbjct: 68  DPIPQAYFLEVSSPGAERPLKKVKDLEKAVGKNVHVTTYEPV 109


>gi|293115578|ref|ZP_05792144.2| putative cytoplasmic protein [Butyrivibrio crossotus DSM 2876]
 gi|292808915|gb|EFF68120.1| putative cytoplasmic protein [Butyrivibrio crossotus DSM 2876]
          Length = 166

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + +I P+IE   F  V +  ++E  +  L+ ++++  G +T+ DC E+S+  S  LD  +
Sbjct: 23  TELIMPIIESCGFELVDLEYVKEGSSKYLRAYIDKP-GGITVDDCAEVSRPFSDKLDEAD 81

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLR 111
            I+  Y LEVSSPG+ RP  +  DF R
Sbjct: 82  FIDEAYILEVSSPGLFRPFKKDKDFER 108


>gi|163791588|ref|ZP_02185989.1| hypothetical protein CAT7_03409 [Carnobacterium sp. AT7]
 gi|159873137|gb|EDP67240.1| hypothetical protein CAT7_03409 [Carnobacterium sp. AT7]
          Length = 157

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++QP++E   F  V I  ++E +N  L++++++ +G + L DC  +S+ IS  +D  
Sbjct: 8   VTEIVQPIVERNQFELVDIEFVKEGQNWFLRVYIDKPEG-IDLEDCALVSEQISQHMDKI 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDF 109
             + I   Y LEVSSPG +RP+ ++ D+
Sbjct: 67  DPDPIPQAYFLEVSSPGAERPLKKEQDY 94


>gi|37523057|ref|NP_926434.1| hypothetical protein glr3488 [Gloeobacter violaceus PCC 7421]
 gi|35214060|dbj|BAC91429.1| glr3488 [Gloeobacter violaceus PCC 7421]
          Length = 182

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 69/133 (51%), Gaps = 5/133 (3%)

Query: 9   SKYEPRIFGDMG---LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNM 64
           S +E   F  M    +   ++++ +PV E++  + V ++     K   L++ +       
Sbjct: 17  SGFEAHFFDGMNPRDIVEQVTALAEPVAEQLGLQLVAVAYQTHTKPATLRVDIRHPTEGT 76

Query: 65  TLRDCEELSQAISPILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
            L DCE++S+A+  +LD  +++I G Y LEVSSPG++R +    +F+ + G  V  +   
Sbjct: 77  GLDDCEKMSRALEALLDTRDDLIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFG 136

Query: 124 SSGDKQKLIGKIM 136
               K++  G+++
Sbjct: 137 PVDGKKQWEGRLL 149


>gi|167950227|ref|ZP_02537301.1| 15 kDa protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 79

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 44/75 (58%)

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I+  Y LEVSSPG+DRP+   +DF R+ G  V  +  +  G++++  G + G 
Sbjct: 1   MLDVEDPIKEKYDLEVSSPGLDRPLFEAADFERFKGQRVRVKTRMKIGNQRRFSGTLCGL 60

Query: 139 SETGFFLEKEKRGEK 153
                 LE++ +  +
Sbjct: 61  EGNTILLEEDAQAAR 75


>gi|326803577|ref|YP_004321395.1| hypothetical protein HMPREF9243_1141 [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650272|gb|AEA00455.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
          Length = 157

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           + ++I+  I EM ++   I+  +E K+  L+I+++ +DG +T+ DC + S+ IS ILD  
Sbjct: 8   VKALIEADINEMGYQLFDITFSKEGKDWYLRIYIDNNDG-ITIADCVKASEKISEILDNV 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            ++ I   Y LEVSSPG +RP+   +   +  G  V           + + G+++  SE 
Sbjct: 67  EDDPIPQAYYLEVSSPGAERPLNNDNAIQQAIGKWVHLNFYHEIDGSKFVEGRLLEASEQ 126

Query: 142 GFFLE 146
            F LE
Sbjct: 127 YFTLE 131


>gi|268316866|ref|YP_003290585.1| hypothetical protein Rmar_1307 [Rhodothermus marinus DSM 4252]
 gi|262334400|gb|ACY48197.1| protein of unknown function DUF150 [Rhodothermus marinus DSM 4252]
          Length = 160

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 69/121 (57%), Gaps = 3/121 (2%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQA 75
           G   L   I + ++ V++  +F  + + +   +   +++IF++ D G  +LRD E+LS+ 
Sbjct: 7   GTPALIEQIRARVEEVLQGTTFFLIDVVVRGRRGAHVVEIFIDGDRGP-SLRDLEQLSRE 65

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV-LSSGDKQKLIGK 134
           I  +LD ++++ G Y L VSSPG+DRP+V    + +  G  +  ++V ++    ++L G 
Sbjct: 66  IGFLLDSDDLLPGPYTLNVSSPGVDRPLVHPRQYPKHVGRELEVKLVAVADAPAERLRGT 125

Query: 135 I 135
           +
Sbjct: 126 L 126


>gi|77457004|ref|YP_346509.1| hypothetical protein Pfl01_0777 [Pseudomonas fluorescens Pf0-1]
 gi|77381007|gb|ABA72520.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 173

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LDV
Sbjct: 28  ELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLDV 86

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           E+ I   Y LEVSSPG++RP+     F ++ G  V
Sbjct: 87  EDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQV 121


>gi|160913531|ref|ZP_02076222.1| hypothetical protein EUBDOL_00007 [Eubacterium dolichum DSM 3991]
 gi|158434083|gb|EDP12372.1| hypothetical protein EUBDOL_00007 [Eubacterium dolichum DSM 3991]
          Length = 181

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E KN +LQI + R DG M +  C E+S+ IS  LD E+ I+  Y LEV SPG +R +   
Sbjct: 56  EGKNKILQIAIMRKDGTMDIDTCAEVSEKISAKLDEEDFIQSEYFLEVCSPGAERELKTY 115

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIA 161
                  G  V  ++         + G ++   E    ++   +  K   E++IA
Sbjct: 116 EQIKDAIGEFVYVKLKDPKAGMCDVKGTLLSCEENSILIQYMDKAVKKKAEIEIA 170


>gi|239636257|ref|ZP_04677259.1| conserved hypothetical protein [Staphylococcus warneri L37603]
 gi|239597612|gb|EEQ80107.1| conserved hypothetical protein [Staphylococcus warneri L37603]
          Length = 155

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 8/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +  +IQPV+++++F  V+I  ++E K+  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   IAEQVEPIIQPVLDDLNFELVEIEYVKEGKDHFLRISIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+  +        H +   + +   ++++ +G +    
Sbjct: 63  MDENDPIPEMYYLDVASPGAERPIKNEKALKDAISHPIFISLYIPIENEKEWLGILKEVK 122

Query: 140 ETGFFLE-KEKRGEKDMNELQIAISFDSLLSAR 171
           E    +E KEK   K      I I  + +  AR
Sbjct: 123 EDIILIEVKEKSKTK-----TIEIPRNKIAKAR 150


>gi|15924255|ref|NP_371789.1| hypothetical protein SAV1265 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926848|ref|NP_374381.1| hypothetical protein SA1108 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148267755|ref|YP_001246698.1| hypothetical protein SaurJH9_1325 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393814|ref|YP_001316489.1| hypothetical protein SaurJH1_1351 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156979586|ref|YP_001441845.1| hypothetical protein SAHV_1255 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315621|ref|ZP_04838834.1| hypothetical protein SauraC_05652 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253733497|ref|ZP_04867662.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|255006052|ref|ZP_05144653.2| hypothetical protein SauraM_06265 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257795679|ref|ZP_05644658.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258416082|ref|ZP_05682350.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258421665|ref|ZP_05684589.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258434821|ref|ZP_05688895.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258444603|ref|ZP_05692932.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258447564|ref|ZP_05695708.1| hypothetical protein SAIG_00219 [Staphylococcus aureus A6300]
 gi|258449406|ref|ZP_05697509.1| hypothetical protein SAHG_00482 [Staphylococcus aureus A6224]
 gi|258454785|ref|ZP_05702749.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|269202882|ref|YP_003282151.1| hypothetical protein SAAV_1240 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892753|ref|ZP_06300988.1| hypothetical protein SGAG_00108 [Staphylococcus aureus A8117]
 gi|282927607|ref|ZP_06335223.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|295406202|ref|ZP_06816009.1| UPF0090 protein [Staphylococcus aureus A8819]
 gi|296274823|ref|ZP_06857330.1| hypothetical protein SauraMR_00705 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297244430|ref|ZP_06928313.1| hypothetical protein SLAG_00512 [Staphylococcus aureus A8796]
 gi|54040041|sp|P67221|RIMP_STAAN RecName: Full=Ribosome maturation factor rimP
 gi|54042669|sp|P67220|RIMP_STAAM RecName: Full=Ribosome maturation factor rimP
 gi|166977846|sp|A7X1P6|RIMP_STAA1 RecName: Full=Ribosome maturation factor rimP
 gi|189038661|sp|A5ISE9|RIMP_STAA9 RecName: Full=Ribosome maturation factor rimP
 gi|189038668|sp|A6U184|RIMP_STAA2 RecName: Full=Ribosome maturation factor rimP
 gi|13701065|dbj|BAB42360.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247035|dbj|BAB57427.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740824|gb|ABQ49122.1| protein of unknown function DUF150 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946266|gb|ABR52202.1| protein of unknown function DUF150 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156721721|dbj|BAF78138.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253728551|gb|EES97280.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|257789651|gb|EEV27991.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257839230|gb|EEV63706.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257842351|gb|EEV66776.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257849182|gb|EEV73164.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257850096|gb|EEV74049.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257853755|gb|EEV76714.1| hypothetical protein SAIG_00219 [Staphylococcus aureus A6300]
 gi|257857394|gb|EEV80292.1| hypothetical protein SAHG_00482 [Staphylococcus aureus A6224]
 gi|257863168|gb|EEV85932.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262075172|gb|ACY11145.1| hypothetical protein SAAV_1240 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590610|gb|EFB95687.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282764750|gb|EFC04875.1| hypothetical protein SGAG_00108 [Staphylococcus aureus A8117]
 gi|285816947|gb|ADC37434.1| clustered with transcription termination protein NusA
           [Staphylococcus aureus 04-02981]
 gi|294968790|gb|EFG44812.1| UPF0090 protein [Staphylococcus aureus A8819]
 gi|297178460|gb|EFH37706.1| hypothetical protein SLAG_00512 [Staphylococcus aureus A8796]
 gi|312829659|emb|CBX34501.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315131059|gb|EFT87043.1| hypothetical protein CGSSa03_05939 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727532|gb|EGG63988.1| hypothetical protein SA21172_0119 [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 155

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++QP++E+++F  V +  ++E ++  L+I ++++ G + L DC   S+ IS  +D  
Sbjct: 8   VEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKE-GGVDLNDCTLASEKISEAMDAN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I   Y L+V+SPG +RP+ ++ DF
Sbjct: 67  DPIPEMYYLDVASPGAERPIKKEQDF 92


>gi|227544952|ref|ZP_03975001.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           CF48-3A]
 gi|300910017|ref|ZP_07127477.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           SD2112]
 gi|77745317|gb|ABB02559.1| unknown [Lactobacillus reuteri]
 gi|227185063|gb|EEI65134.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           CF48-3A]
 gi|300892665|gb|EFK86025.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           SD2112]
          Length = 162

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 59/96 (61%), Gaps = 4/96 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-V 82
           ++ ++ P++++  F    +  ++E K+  L++++++D G +TL DC  +S  +S  LD V
Sbjct: 13  VTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYIDKD-GGITLEDCALVSDELSEALDNV 71

Query: 83  E-NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           E + I   Y LEVSSPG +RP+ ++ D+ R   H +
Sbjct: 72  EPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYI 107


>gi|116333945|ref|YP_795472.1| hypothetical protein LVIS_1339 [Lactobacillus brevis ATCC 367]
 gi|122269371|sp|Q03QT1|RIMP_LACBA RecName: Full=Ribosome maturation factor rimP
 gi|116099292|gb|ABJ64441.1| hypothetical protein LVIS_1339 [Lactobacillus brevis ATCC 367]
          Length = 157

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 8/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++++ QP++ +  F  V +  ++E K+  L++++++  G + + +C  +S  +S  +D  
Sbjct: 8   VTALAQPIVAQHQFELVDVEFVKEGKSWYLRLYIDKP-GGINIEECALVSDEVSEKMDAL 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I   Y LEVSSPG +RP+ + +DF +  G  +   +    G+ +   G ++  +  
Sbjct: 67  DPDPIPQAYFLEVSSPGAERPLKKPADFEKAVGDYIHVSLYQKIGNSKVYEGTLLSLTAD 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE   +G        + I  D++  ARL +
Sbjct: 127 SLDLEVNLKGRIKT----LTIPRDAVAQARLAI 155


>gi|326799023|ref|YP_004316842.1| ribosome maturation factor rimP [Sphingobacterium sp. 21]
 gi|326549787|gb|ADZ78172.1| Ribosome maturation factor rimP [Sphingobacterium sp. 21]
          Length = 154

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 7/117 (5%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           D  +T++DC  +S+ +   L+ EN IE  Y LEVSSPGID P+      LR     +   
Sbjct: 41  DQGITIQDCAAISRHVGYHLEEENAIENAYNLEVSSPGIDTPL----KLLRQYQKNIGRS 96

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEK--EKRGEKDMNELQIAISFDSLLSARLIVT 175
           I L   D  K  G ++  SE    L +  +++G+K + +++  +  D ++  +++++
Sbjct: 97  ITLKMADGSKREGTLLAASEKEMKLAETIKEKGKKAI-QVETVVPLDQVIETKVLIS 152


>gi|315652149|ref|ZP_07905147.1| protein of hypothetical function DUF150 [Eubacterium saburreum DSM
           3986]
 gi|315485641|gb|EFU76025.1| protein of hypothetical function DUF150 [Eubacterium saburreum DSM
           3986]
          Length = 166

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)

Query: 29  IQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ +  E+ F  V I  ++E     L+++ + D G + + DC E+S+ +S  LD E+ I+
Sbjct: 27  LEKLSSELKFELVDIEFVKEAGEYYLRVYCDMD-GGIGIEDCAEISRHLSDWLDEEDFID 85

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             Y LEVSSPG+ R + +  DFLR  G  V
Sbjct: 86  EGYILEVSSPGLGRTLKKDKDFLRELGKEV 115


>gi|57168691|ref|ZP_00367823.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|305432680|ref|ZP_07401841.1| conserved hypothetical protein [Campylobacter coli JV20]
 gi|57019972|gb|EAL56652.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|304444391|gb|EFM37043.1| conserved hypothetical protein [Campylobacter coli JV20]
          Length = 147

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 10/111 (9%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + L DC  LS+ +SPI DVE  + G Y LEVSS G++R + +   F +    +V     +
Sbjct: 45  VNLDDCARLSEILSPIFDVEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVK----I 100

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++G+K+K+  KI+   +    LE  +  EK        + F  +  AR  +
Sbjct: 101 TTGEKEKIEAKIISVEDENITLENLENQEK------TTLKFSDIKKARTFI 145


>gi|314937504|ref|ZP_07844837.1| UPF0090 family protein [Enterococcus faecium TX0133a04]
 gi|314942163|ref|ZP_07849017.1| UPF0090 family protein [Enterococcus faecium TX0133C]
 gi|314947497|ref|ZP_07850912.1| UPF0090 family protein [Enterococcus faecium TX0082]
 gi|314951484|ref|ZP_07854533.1| UPF0090 family protein [Enterococcus faecium TX0133A]
 gi|314992574|ref|ZP_07857992.1| UPF0090 family protein [Enterococcus faecium TX0133B]
 gi|314995491|ref|ZP_07860591.1| UPF0090 family protein [Enterococcus faecium TX0133a01]
 gi|313590325|gb|EFR69170.1| UPF0090 family protein [Enterococcus faecium TX0133a01]
 gi|313592866|gb|EFR71711.1| UPF0090 family protein [Enterococcus faecium TX0133B]
 gi|313596324|gb|EFR75169.1| UPF0090 family protein [Enterococcus faecium TX0133A]
 gi|313599086|gb|EFR77931.1| UPF0090 family protein [Enterococcus faecium TX0133C]
 gi|313643145|gb|EFS07725.1| UPF0090 family protein [Enterococcus faecium TX0133a04]
 gi|313646047|gb|EFS10627.1| UPF0090 family protein [Enterococcus faecium TX0082]
          Length = 147

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 64/106 (60%), Gaps = 5/106 (4%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV--EN 84
           ++ P+++E +F  V++  ++E K+  L++F++++ G + + +C  +S+ +S  LD    +
Sbjct: 1   MVTPILDEQNFELVEVEFVKEGKSWFLRVFIDKE-GGIDIEECAFVSEKLSEKLDAADPD 59

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQ 129
            I   Y LEVSSPG +RP+ ++SD+ +  G  V   +     G+KQ
Sbjct: 60  PIPQAYFLEVSSPGAERPLKKESDYEKALGDYVHVSLYQPVDGEKQ 105


>gi|148543927|ref|YP_001271297.1| hypothetical protein Lreu_0695 [Lactobacillus reuteri DSM 20016]
 gi|184153323|ref|YP_001841664.1| hypothetical protein LAR_0668 [Lactobacillus reuteri JCM 1112]
 gi|167016762|sp|A5VJD6|RIMP_LACRD RecName: Full=Ribosome maturation factor rimP
 gi|226708007|sp|B2G6V2|RIMP_LACRJ RecName: Full=Ribosome maturation factor rimP
 gi|148530961|gb|ABQ82960.1| protein of unknown function DUF150 [Lactobacillus reuteri DSM
           20016]
 gi|183224667|dbj|BAG25184.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
          Length = 157

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 14/156 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-V 82
           ++ ++ P++++  F    +  ++E K+  L++++ +D G +TL DC  +S  +S  LD V
Sbjct: 8   VTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYINKD-GGITLEDCALVSDELSEALDNV 66

Query: 83  E-NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE- 140
           E + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G +   S+ 
Sbjct: 67  EPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKVYEGTLTQLSDK 126

Query: 141 --TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             T  +L+K +         QI I    +  ARL +
Sbjct: 127 EITLDYLDKTRHR-------QITIDRQKIAQARLAI 155


>gi|313906215|ref|ZP_07839561.1| protein of unknown function DUF150 [Eubacterium cellulosolvens 6]
 gi|313468945|gb|EFR64301.1| protein of unknown function DUF150 [Eubacterium cellulosolvens 6]
          Length = 157

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 2/83 (2%)

Query: 36  MSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
           M++  V +  ++E     L+ + +++ G +T+ DCE +S+A    LD  ++IE  Y LEV
Sbjct: 23  MNYEFVDLEYVKEAGTWYLRAYADKE-GGITVDDCEIISRAFEEKLDAADLIEEAYILEV 81

Query: 95  SSPGIDRPMVRKSDFLRWNGHVV 117
           SSPG+ RP+ ++ D++R  G  V
Sbjct: 82  SSPGLGRPLKKERDYVRAMGQRV 104


>gi|152993548|ref|YP_001359269.1| hypothetical protein SUN_1969 [Sulfurovum sp. NBC37-1]
 gi|166980517|sp|A6QBQ3|RIMP_SULNB RecName: Full=Ribosome maturation factor rimP
 gi|151425409|dbj|BAF72912.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 142

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G + L  C  +S  +SP LDV   + GHYRLEVSSPGI+R + +   F    G  V  ++
Sbjct: 40  GGVNLDLCATISNELSPFLDVHPPMNGHYRLEVSSPGIERKLSKPIHFQNAIGEKV--KV 97

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEK 153
            L  GDK K  G +    + G  +E  K+GE+
Sbjct: 98  KLLGGDKLK--GVLKAADDKGITVET-KQGEE 126


>gi|91208372|sp|Q3KI86|RIMP_PSEPF RecName: Full=Ribosome maturation factor rimP
          Length = 158

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LDV
Sbjct: 13  ELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLDV 71

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           E+ I   Y LEVSSPG++RP+     F ++ G  V  ++
Sbjct: 72  EDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKL 110


>gi|259586222|sp|C3K261|RIMP_PSEFS RecName: Full=Ribosome maturation factor rimP
          Length = 158

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LDV
Sbjct: 13  ELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLDV 71

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           E+ I   Y LEVSSPG++RP+     F ++ G  V  ++
Sbjct: 72  EDPISVEYTLEVSSPGMERPLFTIDQFAKFAGEQVKIKL 110


>gi|254412382|ref|ZP_05026156.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196180692|gb|EDX75682.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 153

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 1/136 (0%)

Query: 31  PVIEEMSFRSV-QISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           PV E++    V  +     +  +L++ +   DG+  L DCE +S+A+   LD  ++I   
Sbjct: 15  PVAEKLGLEFVGAVFHTNRRPPVLRVDIRNRDGDTGLDDCERMSRALEAELDAVDLIPDA 74

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LE+SSPGI + +    DF+ + G  V           ++  GK++   +T  ++ ++ 
Sbjct: 75  YVLEISSPGISQELTTDRDFIAFKGFSVVVNTAEPDQGHKEWRGKLIRRDDTRVYINQKG 134

Query: 150 RGEKDMNELQIAISFD 165
           R      +    + FD
Sbjct: 135 RAIAIPRDQVTKVQFD 150


>gi|311030089|ref|ZP_07708179.1| hypothetical protein Bm3-1_06021 [Bacillus sp. m3-13]
          Length = 156

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 2/88 (2%)

Query: 31  PVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P+++EM+   V I  ++E  +  L++FV+++ G + + DC  +S+ +S  LD  + I  +
Sbjct: 15  PIVKEMNVELVDIEYVKEGSSWFLRVFVDKE-GGIDIEDCGTVSEKLSEKLDELDPIPHN 73

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           Y LEVSSPG +RP+ +K D  +  G  V
Sbjct: 74  YFLEVSSPGAERPLKKKEDIEKSVGKYV 101


>gi|332653589|ref|ZP_08419334.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
 gi|332518735|gb|EGJ48338.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
          Length = 151

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + + QP +E        +  ++E     L+ +++++ G +++ DCE +S+ +S  LD  +
Sbjct: 9   AQLAQPFVEAAGCSLWDVEYVKEAGEWYLRFYIDKE-GGVSINDCEAVSRPLSDALDEAD 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            IEG Y LEVSS G DR + +   F ++ G  V  ++  +   ++  +G
Sbjct: 68  PIEGSYTLEVSSAGADRALKKPEHFAQFQGAEVEVKLYRARDGRKDYVG 116


>gi|300772909|ref|ZP_07082778.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759080|gb|EFK55907.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 156

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 60/103 (58%), Gaps = 5/103 (4%)

Query: 43  ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           +S+  + N +L+I V+ D G + + DC ++S+ +   L+ EN+IE  YRLEVSSPGID P
Sbjct: 26  VSIKMQSNGVLEILVDGDSG-IAIDDCVKISRHVGFHLEEENVIETAYRLEVSSPGIDSP 84

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           ++     +R     +   + + + + +K  GK++  +E+   +
Sbjct: 85  LI----MIRQYKKNIGRNVRVKNHEGEKREGKLLNVTESNITI 123


>gi|296272022|ref|YP_003654653.1| hypothetical protein Arnit_0482 [Arcobacter nitrofigilis DSM 7299]
 gi|296096197|gb|ADG92147.1| protein of unknown function DUF150 [Arcobacter nitrofigilis DSM
           7299]
          Length = 142

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 13/119 (10%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I++   DG ++L  C E+S+ +SPILD    + G Y LEVSSPGI+R + + + ++ 
Sbjct: 31  IFRIYITSKDG-VSLDKCAEISRLVSPILDTNEPMYGKYNLEVSSPGIERKLKKTAHYIS 89

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
             G  V     +   DK  L G+++   E    + K + GE+        IS+D + SA
Sbjct: 90  SIGENVK----VKDFDKNVLKGELIFADENEIKV-KTQEGEE-------TISYDKISSA 136


>gi|269792607|ref|YP_003317511.1| hypothetical protein Taci_0997 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100242|gb|ACZ19229.1| protein of unknown function DUF150 [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 150

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 62/105 (59%), Gaps = 7/105 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN--I 85
           I+ ++E++ +  V++ L+ +    ++++ ++  D  +   DCE +S+ +  +LD E    
Sbjct: 13  IRRLVEDLGYICVEVKLVRDLGGQVVRVTIDSPDAPIGHGDCEAVSRKVGELLDGEGEGF 72

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           ++G Y LEVSSPG +RP++   DF R+ G     +I +S+G  +K
Sbjct: 73  LKGRYYLEVSSPGPNRPLLSLDDFRRFKGS----KIRVSTGKGKK 113


>gi|258404631|ref|YP_003197373.1| hypothetical protein Dret_0498 [Desulfohalobium retbaense DSM 5692]
 gi|257796858|gb|ACV67795.1| protein of unknown function DUF150 [Desulfohalobium retbaense DSM
           5692]
          Length = 157

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S +I+P+          + +   +  +L+++V+  +G +++  C  LS+ IS  LDVE+
Sbjct: 9   LSELIKPLAASCGLDVWGMEIPASRGGVLRVYVDSPNG-VSIDQCATLSRHISVTLDVED 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            + G Y LEVSSPG++RP    S    + G  VA ++      ++K  G ++
Sbjct: 68  PLPGPYTLEVSSPGLERPFFTVSQLPPYIGQPVALKLQAPMQGRKKWRGVLI 119


>gi|91774421|ref|YP_544177.1| hypothetical protein Mfla_0065 [Methylobacillus flagellatus KT]
 gi|122399243|sp|Q1GXD8|RIMP_METFK RecName: Full=Ribosome maturation factor rimP
 gi|91708408|gb|ABE48336.1| protein of unknown function DUF150 [Methylobacillus flagellatus KT]
          Length = 144

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 73/123 (59%), Gaps = 3/123 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D++++++  + ++ +  V + L   +  L+++F+++ +G + + DC  +S  +S +L VE
Sbjct: 3   DLNALLERSLGQLGYELVDMEL-ANRGKLIRLFIDKPEG-INIDDCVLVSNHLSNLLAVE 60

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I+ + RLE+SSPG+DR + + SDF+R+ G     ++ +    ++  +G + G  +   
Sbjct: 61  HDID-YDRLEISSPGLDRVLKKTSDFVRFAGERAQVKLRMPIEGRKNFLGILRGVDQEYL 119

Query: 144 FLE 146
            LE
Sbjct: 120 VLE 122


>gi|323144580|ref|ZP_08079169.1| hypothetical protein HMPREF9444_01845 [Succinatimonas hippei YIT
           12066]
 gi|322415656|gb|EFY06401.1| hypothetical protein HMPREF9444_01845 [Succinatimonas hippei YIT
           12066]
          Length = 175

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 7/122 (5%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LLQIF++  DG ++   C +++  +SP LD  +II   Y LEVSSPG DR +        
Sbjct: 50  LLQIFIDSKDG-VSADTCGDITNMLSPALDAADIIAPAYILEVSSPGFDRILFTLDQARA 108

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           + G  +  E+ +  G ++K  G +   +E       +K         Q+ I+F ++  AR
Sbjct: 109 YIGKKIKAEVRIPVGGRRKFEGVLEEVTEDNSLKINDKISG------QVEIAFSNISVAR 162

Query: 172 LI 173
           L+
Sbjct: 163 LV 164


>gi|227364836|ref|ZP_03848883.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM2-3]
 gi|325682538|ref|ZP_08162055.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM4-1A]
 gi|227070099|gb|EEI08475.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM2-3]
 gi|324978377|gb|EGC15327.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM4-1A]
          Length = 162

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 14/156 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-V 82
           ++ ++ P++++  F    +  ++E K+  L++++ +D G +TL DC  +S  +S  LD V
Sbjct: 13  VTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYINKD-GGITLEDCALVSDELSEALDNV 71

Query: 83  E-NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE- 140
           E + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G +   S+ 
Sbjct: 72  EPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKVYEGTLTQLSDK 131

Query: 141 --TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             T  +L+K +         QI I    +  ARL +
Sbjct: 132 EITLDYLDKTRHR-------QITIDRQKIAQARLAI 160


>gi|293604236|ref|ZP_06686644.1| protein of hypothetical function DUF150 [Achromobacter piechaudii
           ATCC 43553]
 gi|292817461|gb|EFF76534.1| protein of hypothetical function DUF150 [Achromobacter piechaudii
           ATCC 43553]
          Length = 174

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 3/70 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++ ++R  G + + DCE++S+ +S + +VEN+   + RLEV SPGIDRP+  +++F R
Sbjct: 37  LLRVTIDRV-GGVRIEDCEQVSRQLSRVFEVENV--DYKRLEVGSPGIDRPLRNEAEFRR 93

Query: 112 WNGHVVACEI 121
           + G  +  ++
Sbjct: 94  FAGERIEIKL 103


>gi|212696552|ref|ZP_03304680.1| hypothetical protein ANHYDRO_01090 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676488|gb|EEB36095.1| hypothetical protein ANHYDRO_01090 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 146

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 7/143 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +   ++  I  + +  V I  + E  N +L+ F+ +D G +T+ DCE+ S  +S
Sbjct: 1   MDLISKLKENLESDINNLGYELVDIEFVTEGNNKILRFFIYKD-GGITIDDCEKTSNLLS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSSP + RP+    D  R    ++  E+ L +G  +K +  I  
Sbjct: 60  ERLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELL--EVKLKNG--EKFLANIEE 115

Query: 138 TSETGF-FLEKEKRGEKDMNELQ 159
             E    F  ++++ E D NE++
Sbjct: 116 IKENSLVFKCEDEQKEVDKNEIK 138


>gi|330816692|ref|YP_004360397.1| hypothetical protein bgla_1g17960 [Burkholderia gladioli BSR3]
 gi|327369085|gb|AEA60441.1| hypothetical protein bgla_1g17960 [Burkholderia gladioli BSR3]
          Length = 153

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L +++++  G +++ DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCVYIDQPAG-ISIDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G+ ++  +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGNEISVTLKKPLEGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|317402908|gb|EFV83449.1| hypothetical protein HMPREF0005_01713 [Achromobacter xylosoxidans
           C54]
          Length = 175

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 3/64 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++ ++R  G + + DCE++S+ +S + +VENI   + RLEV SPGIDRP+  +++F R
Sbjct: 37  LLRVTIDRV-GGVRIEDCEQVSRQLSRVYEVENI--DYKRLEVGSPGIDRPLRNEAEFRR 93

Query: 112 WNGH 115
           + G 
Sbjct: 94  FAGE 97


>gi|167465393|ref|ZP_02330482.1| hypothetical protein Plarl_23005 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 140

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 9/143 (6%)

Query: 33  IEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           + E  F  V I  ++E  N  L+++V++ +G + + DC  +S+ +S  LD ++ I   Y 
Sbjct: 4   LTENGFELVDIEYVKEGSNWFLRVYVDKLEGGIDIEDCGRISEYLSAKLDEKDPIPTAYF 63

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           LEVSSPG +RP+ +  D  +  G  V         + ++  G+++        ++  K+ 
Sbjct: 64  LEVSSPGAERPLKKPQDIAKSVGKHVFITTYEPVDNAKEFEGELLSFDGETLVVKTAKK- 122

Query: 152 EKDMNELQIAISFDSLLSARLIV 174
                  + +I ++ + SARL +
Sbjct: 123 -------KSSIPYEKVASARLAI 138


>gi|268678891|ref|YP_003303322.1| hypothetical protein Sdel_0250 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616922|gb|ACZ11287.1| protein of unknown function DUF150 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 142

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 13/120 (10%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + +I++   +G + L  C E+S+ +SPI DVE  +EG Y  EVSSPGI+R +++   F  
Sbjct: 31  IFRIYITSKEG-INLDKCAEVSRILSPIFDVEPPLEGEYLFEVSSPGIERKLLKPEHFSV 89

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G  V  ++     +K+K IG + G +        + R E ++ E    I+ D +  AR
Sbjct: 90  SVGEKVKIKL----KNKEKFIGILEGFANNTL----QVRVENEVKE----IALDDIEKAR 137


>gi|304404289|ref|ZP_07385951.1| protein of unknown function DUF150 [Paenibacillus curdlanolyticus
           YK9]
 gi|304347267|gb|EFM13099.1| protein of unknown function DUF150 [Paenibacillus curdlanolyticus
           YK9]
          Length = 153

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++P I+E  F  V +  ++E  N  L+IFV+++ G + + +C  +S+ +S  LD +
Sbjct: 10  VEEMVKPFIDENGFELVDVEYVKEGSNWFLRIFVDKE-GGIDIDECGRVSEYLSEQLDQK 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG-HVVACEIVLSSGDKQ 129
           + I   Y LEVSSPG +RP+ +  D  +  G HV         G K+
Sbjct: 69  DPITDAYFLEVSSPGAERPLKKPEDVHKAVGKHVYMTTYEPVHGQKE 115


>gi|299139240|ref|ZP_07032416.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX8]
 gi|298598920|gb|EFI55082.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX8]
          Length = 193

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG-HYRLEVSSPGIDRPMVR 105
           EE  L   + VE   G +T  DC   ++    +LDVE++I G  Y LE SSPG++R +++
Sbjct: 59  EEAGLPKGVPVETLSG-VTHEDCANFARDFGTVLDVEDLIPGAEYTLETSSPGLERKLLK 117

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE----KEK-RGEKDMNELQI 160
            +D+ R+ G +V  +        +   G+++    T   L+    K+K + +K +    +
Sbjct: 118 AADYERFKGSLVKVQTFSPVDSNRHFTGRLVAFEGTNLTLDLAAVKQKGKAKKTLTAQTV 177

Query: 161 AISFDSLLSARLIV 174
            IS  ++  A L+ 
Sbjct: 178 EISLANVEKANLVA 191


>gi|317498936|ref|ZP_07957219.1| hypothetical protein HMPREF0996_02203 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893769|gb|EFV15968.1| hypothetical protein HMPREF0996_02203 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 95

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 2/81 (2%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P+IE  +F  V +  ++E  N  L+++ +++ G + + DC  +S+++   LD E+ I
Sbjct: 14  LVLPIIEANNFELVDVEYVKEGANWYLRVYADKE-GGIAIDDCVLISRSLEEKLDAEDFI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKS 107
           E  Y LEVSSPG+ RP+ +K 
Sbjct: 73  EDAYILEVSSPGLGRPLKKKK 93


>gi|328957407|ref|YP_004374793.1| hypothetical protein CAR_c10840 [Carnobacterium sp. 17-4]
 gi|328673731|gb|AEB29777.1| hypothetical protein CAR_c10840 [Carnobacterium sp. 17-4]
          Length = 154

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 57/96 (59%), Gaps = 4/96 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++P++E   F    I  ++E KN  L++++++ +G + L DC  +S+ IS  +D  
Sbjct: 5   VTEIVKPIVERNQFELEDIEFIKEGKNWFLRVYIDKPEG-IDLEDCALVSEQISEHMDKI 63

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           N   I   Y LEVSSPG +RP+ ++ D++   G  +
Sbjct: 64  NPDPIPQAYFLEVSSPGAERPLKKEEDYVNAVGEYI 99


>gi|297156813|gb|ADI06525.1| hypothetical protein SBI_03404 [Streptomyces bingchenggensis BCW-1]
          Length = 180

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKS 107
           K  +L+I V+ DDG + L  C ELS+AIS  LD  + +  H Y LEV+SPG DRP+    
Sbjct: 34  KRRVLRIVVDSDDG-VQLDACAELSRAISQTLDDTDAMGRHPYVLEVTSPGADRPLTEPR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            + R  G ++   +     +  +L+ +I    + G  +E
Sbjct: 93  HYRRAAGRLMKARL----AEGGELVARITAVDDEGLDVE 127


>gi|149926273|ref|ZP_01914535.1| hypothetical protein LMED105_02033 [Limnobacter sp. MED105]
 gi|149825091|gb|EDM84303.1| hypothetical protein LMED105_02033 [Limnobacter sp. MED105]
          Length = 171

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           E N LL+I ++   G +T+ DCE++S  ++ +  VEN+   + RLE+SSPG+DR + RK 
Sbjct: 45  EGNGLLRIMIDSPTG-VTVEDCEKVSHQLTHLFTVENV--NYERLEISSPGVDRVLRRKK 101

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           DF R+    V+ +   +  ++++  G +    E  +
Sbjct: 102 DFERFLDQEVSLKFKRAINNQKQFKGVLQKGKEQAW 137


>gi|311104986|ref|YP_003977839.1| hypothetical protein AXYL_01790 [Achromobacter xylosoxidans A8]
 gi|310759675|gb|ADP15124.1| hypothetical protein AXYL_01790 [Achromobacter xylosoxidans A8]
          Length = 182

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 25/137 (18%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++ ++R  G + + DCE++S+ +S + +VEN+   + R+EV SPG+DRP+  +++F R
Sbjct: 44  LLRVTIDRV-GGVRIEDCEQVSRQLSRVFEVENV--DYKRMEVGSPGVDRPLRNEAEFRR 100

Query: 112 WNGHVVACEIVLSSG-DKQKLIGKIM--------------GTSETGFFLEKEKRGEKDMN 156
           + G  +  EI L    D +K+   I+              G  +T F LE E +     N
Sbjct: 101 FAGERI--EIKLREALDGRKVFAGILTMPEDDAAASDAAAGMQKTVFGLEFEAK----KN 154

Query: 157 ELQI-AISFDSLLSARL 172
           E+Q+   + D +  A+L
Sbjct: 155 EIQVLNFTVDDIERAKL 171


>gi|157738248|ref|YP_001490932.1| hypothetical protein Abu_2045 [Arcobacter butzleri RM4018]
 gi|166980266|sp|A8EWD9|RIMP_ARCB4 RecName: Full=Ribosome maturation factor rimP
 gi|157700102|gb|ABV68262.1| conserved hypothetical protein (DUF150 domain protein) [Arcobacter
           butzleri RM4018]
          Length = 142

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 14/117 (11%)

Query: 29  IQPVIEEMSFRSVQISLLEE--KNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           I+  +E +  +   IS L E  KN+  + I  E   G + L  C E+S+ +SPILDVE  
Sbjct: 7   IKLTVESLGAKLYDISTLREHDKNIFRVSITCE---GGVNLDKCAEISRMLSPILDVEEP 63

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV-----ACEIV---LSSGDKQKLIGK 134
           + G Y LEVSSPGI+R + +   FL   G  V     A E+    L   D++K++ K
Sbjct: 64  MNGEYLLEVSSPGIERKLKKVDHFLASIGEKVKVKNFATEVFKGELICADEEKIVIK 120


>gi|167570130|ref|ZP_02363004.1| hypothetical protein BoklC_09816 [Burkholderia oklahomensis C6786]
          Length = 153

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           ++ +++++  G +T+ DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MVCVYIDQPAG-ITIDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFTR 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G      +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEAVITLKKPLDGRKTYRGILYAPNGETIGLEFERKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|257869191|ref|ZP_05648844.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257803355|gb|EEV32177.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 157

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 22/150 (14%)

Query: 31  PVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIE 87
           P++E  +F  V++  ++E K+  L++F++++ G + + +C  +S+ +S  LD    + I 
Sbjct: 14  PILEAQNFELVEVEFVKEGKSWFLRVFIDKE-GGIDIEECAFVSEQLSDKLDACDPDPIP 72

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVV------------ACEIVLSSGDKQKLIGKI 135
             Y LEVSSPG +RP+ ++ D+ R  G  +              E  L S D+++L+ KI
Sbjct: 73  QAYFLEVSSPGAERPLKKEEDYHRAVGEYIHLSLYQPVEGEKQFEGFLQSFDEEQLVIKI 132

Query: 136 -MGTSETGFFLEKEKRGEKDMNELQIAISF 164
            + T E    +E+     K++ + ++AI F
Sbjct: 133 RIKTREKELTIER-----KNIAKARLAIQF 157


>gi|322436507|ref|YP_004218719.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX9]
 gi|321164234|gb|ADW69939.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX9]
          Length = 207

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 64  MTLRDCEELSQAISPILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           +T  DC + ++    +LDVE+ I G  Y LEVSSPG++R + + +DF R++G ++  +  
Sbjct: 86  VTHEDCADFARDFGTVLDVEDTIPGAEYTLEVSSPGLERKLAKPADFARFSGFLIKLQTF 145

Query: 123 LSSGDKQKLIGKIMG 137
            +    +   G++ G
Sbjct: 146 TAVDGNRHFQGRLTG 160


>gi|325569919|ref|ZP_08145913.1| protein of hypothetical function DUF150 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325157042|gb|EGC69210.1| protein of hypothetical function DUF150 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 170

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 62/106 (58%), Gaps = 5/106 (4%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV--EN 84
           ++ P+++   F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  LD    +
Sbjct: 24  IVTPILDAQKFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEQLSEQLDQCEPD 82

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQ 129
            I   Y LEVSSPG +RP+ +++D+ R  G  +   +     G+KQ
Sbjct: 83  PIPQAYFLEVSSPGAERPLKKEADYQRAVGEYIHVSLYQPIDGEKQ 128


>gi|184155205|ref|YP_001843545.1| hypothetical protein LAF_0729 [Lactobacillus fermentum IFO 3956]
 gi|227514705|ref|ZP_03944754.1| protein of hypothetical function DUF150 [Lactobacillus fermentum
           ATCC 14931]
 gi|260662295|ref|ZP_05863191.1| UPF0090 protein [Lactobacillus fermentum 28-3-CHN]
 gi|259585802|sp|B2GBN3|RIMP_LACF3 RecName: Full=Ribosome maturation factor rimP
 gi|183226549|dbj|BAG27065.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
 gi|227086909|gb|EEI22221.1| protein of hypothetical function DUF150 [Lactobacillus fermentum
           ATCC 14931]
 gi|260553678|gb|EEX26570.1| UPF0090 protein [Lactobacillus fermentum 28-3-CHN]
          Length = 159

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 58/90 (64%), Gaps = 4/90 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++++++P++ E +F   ++  ++E K+  L+++++++ G +TL DC  +S  +S  LD  
Sbjct: 10  VTALVEPILAEHNFELYEVEFVQEAKSWYLRVYIDKE-GGITLEDCALVSDQLSEQLDSA 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
             + I   Y LEVSSPG +RP+ ++ D+ R
Sbjct: 69  DPDPIPQAYFLEVSSPGAERPLKKEVDYQR 98


>gi|227537267|ref|ZP_03967316.1| protein of hypothetical function DUF150 [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227242871|gb|EEI92886.1| protein of hypothetical function DUF150 [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 156

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 60/103 (58%), Gaps = 5/103 (4%)

Query: 43  ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           +S+  + N +L+I V+ D G + + DC ++S+ +   L+ EN+IE  YRLEVSSPGID P
Sbjct: 26  VSIKMQGNGVLEILVDGDSG-IAIDDCVKISRHVGFHLEEENVIETAYRLEVSSPGIDSP 84

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           +V     +R     +   + + + + +K  GK++  +E+   +
Sbjct: 85  LV----LIRQYEKNIGRNVRVKNHEGEKREGKLLDVTESAITI 123


>gi|254876276|ref|ZP_05248986.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842297|gb|EET20711.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 152

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 52/81 (64%), Gaps = 1/81 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ +S I 
Sbjct: 4   LLDDLYEIVEPITADLGYILWGIEVVGAGKLTIRIFIDHENG-VSVDDCQVVSKEVSAIF 62

Query: 81  DVENIIEGHYRLEVSSPGIDR 101
           DVE+ I   Y LEVSSPG++R
Sbjct: 63  DVEDPISDKYVLEVSSPGMNR 83


>gi|282898606|ref|ZP_06306594.1| protein of unknown function DUF150 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196474|gb|EFA71383.1| protein of unknown function DUF150 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 164

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 1/131 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+  E+    V +     ++  +L++ +     + +L DCE++S+A+   
Sbjct: 16  LVPQIIDLATPLAAELGLEVVGMVFHTNQRPPILRVDIRNPQQDTSLNDCEKMSRALETS 75

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R +    +F+ + G  V          +++  G+++   
Sbjct: 76  LDAAEIILDTYVLEVSSPGISRELATDREFISFKGFPVVVSTCDPDDGEKEWKGQLIRRD 135

Query: 140 ETGFFLEKEKR 150
           ET  +L ++ R
Sbjct: 136 ETKIYLNQKGR 146


>gi|254458920|ref|ZP_05072343.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
 gi|207084191|gb|EDZ61480.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
          Length = 149

 Score = 54.3 bits (129), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 17/157 (10%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK----NLLLQIFVERDDGNMTLRDCEELSQ 74
           M L  DI+S+++ V  E+ + +  +S  +E     +++ +  V+     ++L  C  L+ 
Sbjct: 1   MSLESDINSLVKSVDLEL-YDATVVSENDETIYRISVISKEIVDGKRSGISLDACVNLTH 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            ISP+LDV   + G YRLEV SPGI+R +     FL   G      I L   +K+K  GK
Sbjct: 60  LISPLLDVTPPVSGDYRLEVGSPGIERKLSSLKHFLLSIGE----NISLLLTNKEKYKGK 115

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           ++   ++  FL        ++ + ++ I F  +L A+
Sbjct: 116 LVKVKDSKIFL--------NVGDEKVEIDFYEILKAK 144


>gi|327398876|ref|YP_004339745.1| Ribosome maturation factor rimP [Hippea maritima DSM 10411]
 gi|327181505|gb|AEA33686.1| Ribosome maturation factor rimP [Hippea maritima DSM 10411]
          Length = 140

 Score = 54.3 bits (129), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)

Query: 32  VIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           V+E + +    I L ++K   + I++++  G +++ DCE  S+ IS +LDV++   G Y 
Sbjct: 13  VVESLGYSVYDIELTQKK---ITIYIDKP-GGVSIDDCELASRNISALLDVKDPFSGSYT 68

Query: 92  LEVSSPGIDRPMVRKSDFLRWNG 114
           LEVSSPGI+R +  K  F+   G
Sbjct: 69  LEVSSPGINRKLKTKEHFMAAIG 91


>gi|167627170|ref|YP_001677670.1| hypothetical protein Fphi_0946 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667732|ref|ZP_04755310.1| hypothetical protein FphipA2_03111 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|226696044|sp|B0TWR1|RIMP_FRAP2 RecName: Full=Ribosome maturation factor rimP
 gi|167597171|gb|ABZ87169.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 150

 Score = 54.3 bits (129), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 52/81 (64%), Gaps = 1/81 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ +S I 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGAGKLTIRIFIDHENG-VSVDDCQVVSKEVSAIF 60

Query: 81  DVENIIEGHYRLEVSSPGIDR 101
           DVE+ I   Y LEVSSPG++R
Sbjct: 61  DVEDPISDKYVLEVSSPGMNR 81


>gi|295836232|ref|ZP_06823165.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|295825917|gb|EFG64551.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 183

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKS 107
           +  +LQI V+ D G ++L  C ELS+ IS +LD  + + E  Y LEV+SPG DRP+    
Sbjct: 34  RRRVLQIVVDGDTG-VSLDTCAELSREISTVLDDTDAMGENEYVLEVTSPGADRPLSAHR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            ++R  G +V  ++     +  +L+ +++   + G  LE
Sbjct: 93  HYVRATGRLVRFQL----AEGGELVARLLKADDAGLDLE 127


>gi|237749787|ref|ZP_04580267.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229374652|gb|EEO25043.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 167

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  D+   I+ +I +       I LL+E ++++L+I + + +G ++L DCE +S  I+P+
Sbjct: 2   ITQDLHDKIESLITQKGLELYDIELLKENESMILRISIFKKEG-ISLDDCENISTLIAPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
           LDVE      Y LEVSSPG++R + +   FL   G  VA
Sbjct: 61  LDVELSDLEAYHLEVSSPGVERNLKKPKHFLCSIGQKVA 99


>gi|315636536|ref|ZP_07891772.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315479185|gb|EFU69882.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 142

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 14/117 (11%)

Query: 29  IQPVIEEMSFRSVQISLLEE--KNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           I+  +E +  +   IS L E  KN+  + I  E   G + L  C E+S+ +SPILDVE  
Sbjct: 7   IKLTVESLGAKLYDISTLREHDKNIFRVSITCE---GGVNLDKCAEISRMLSPILDVEEP 63

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV-----ACEIV---LSSGDKQKLIGK 134
           + G Y LEVSSPGI+R + +   FL   G  V     A E+    L   D++K++ K
Sbjct: 64  MNGEYILEVSSPGIERKLKKVDHFLASIGEKVKVKNFATEVFKGELICADEEKIVIK 120


>gi|238027586|ref|YP_002911817.1| hypothetical protein bglu_1g20040 [Burkholderia glumae BGR1]
 gi|237876780|gb|ACR29113.1| Hypothetical protein bglu_1g20040 [Burkholderia glumae BGR1]
          Length = 153

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L +++++  G +++ DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCVYIDQPAG-ISIDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G  ++  +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEISVTLKKPLEGRKTYRGILHAPNGETIGLEFEMKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|282898465|ref|ZP_06306455.1| Protein of unknown function DUF150 [Raphidiopsis brookii D9]
 gi|281196631|gb|EFA71537.1| Protein of unknown function DUF150 [Raphidiopsis brookii D9]
          Length = 163

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L++ +     + +L DCE++S+A+   LD   II   Y LEVSSPGI R +    +F+ 
Sbjct: 47  ILRVDIRNPQQDTSLNDCEKMSRALESYLDAAGIIPDTYVLEVSSPGISRQLETDREFIS 106

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
           + G  V          +++  G+++   ET  +L ++ R
Sbjct: 107 FKGFPVVVSTCDPDDGEKEWKGQLIRRDETKIYLNQKGR 145


>gi|167587340|ref|ZP_02379728.1| hypothetical protein BuboB_18484 [Burkholderia ubonensis Bu]
          Length = 152

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 3/63 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G ++L DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-ISLDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNG 114
           + G
Sbjct: 85  FAG 87


>gi|53719534|ref|YP_108520.1| hypothetical protein BPSL1920 [Burkholderia pseudomallei K96243]
 gi|53724823|ref|YP_102762.1| hypothetical protein BMA1063 [Burkholderia mallei ATCC 23344]
 gi|67641343|ref|ZP_00440123.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|83720636|ref|YP_443083.1| hypothetical protein BTH_I2566 [Burkholderia thailandensis E264]
 gi|121601076|ref|YP_992839.1| hypothetical protein BMASAVP1_A1509 [Burkholderia mallei SAVP1]
 gi|124386071|ref|YP_001026182.1| hypothetical protein BMA10229_A0177 [Burkholderia mallei NCTC
           10229]
 gi|126439674|ref|YP_001058777.1| hypothetical protein BURPS668_1738 [Burkholderia pseudomallei 668]
 gi|126448900|ref|YP_001080548.1| hypothetical protein BMA10247_0989 [Burkholderia mallei NCTC 10247]
 gi|126452322|ref|YP_001066029.1| hypothetical protein BURPS1106A_1760 [Burkholderia pseudomallei
           1106a]
 gi|134282401|ref|ZP_01769106.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
 gi|167004350|ref|ZP_02270108.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
 gi|167562941|ref|ZP_02355857.1| hypothetical protein BoklE_10300 [Burkholderia oklahomensis EO147]
 gi|167582088|ref|ZP_02374962.1| hypothetical protein BthaT_28352 [Burkholderia thailandensis TXDOH]
 gi|167620249|ref|ZP_02388880.1| hypothetical protein BthaB_28340 [Burkholderia thailandensis Bt4]
 gi|167719820|ref|ZP_02403056.1| hypothetical protein BpseD_12440 [Burkholderia pseudomallei DM98]
 gi|167738821|ref|ZP_02411595.1| hypothetical protein Bpse14_12188 [Burkholderia pseudomallei 14]
 gi|167816042|ref|ZP_02447722.1| hypothetical protein Bpse9_12932 [Burkholderia pseudomallei 91]
 gi|167824418|ref|ZP_02455889.1| hypothetical protein Bpseu9_12158 [Burkholderia pseudomallei 9]
 gi|167836823|ref|ZP_02463706.1| hypothetical protein Bpse38_10070 [Burkholderia thailandensis
           MSMB43]
 gi|167845950|ref|ZP_02471458.1| hypothetical protein BpseB_11725 [Burkholderia pseudomallei B7210]
 gi|167894527|ref|ZP_02481929.1| hypothetical protein Bpse7_12319 [Burkholderia pseudomallei 7894]
 gi|167902932|ref|ZP_02490137.1| hypothetical protein BpseN_11790 [Burkholderia pseudomallei NCTC
           13177]
 gi|167919192|ref|ZP_02506283.1| hypothetical protein BpseBC_11610 [Burkholderia pseudomallei
           BCC215]
 gi|217423492|ref|ZP_03454993.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|226199708|ref|ZP_03795261.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|237812040|ref|YP_002896491.1| hypothetical protein GBP346_A1782 [Burkholderia pseudomallei
           MSHR346]
 gi|242317839|ref|ZP_04816855.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|254178698|ref|ZP_04885353.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|254179982|ref|ZP_04886581.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|254188606|ref|ZP_04895117.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254197760|ref|ZP_04904182.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
 gi|254199710|ref|ZP_04906076.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|254206032|ref|ZP_04912384.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|254297817|ref|ZP_04965270.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
 gi|254358406|ref|ZP_04974679.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|257139312|ref|ZP_05587574.1| hypothetical protein BthaA_08929 [Burkholderia thailandensis E264]
 gi|81379645|sp|Q63TP6|RIMP_BURPS RecName: Full=Ribosome maturation factor rimP
 gi|81605125|sp|Q62KK7|RIMP_BURMA RecName: Full=Ribosome maturation factor rimP
 gi|123536573|sp|Q2SVG6|RIMP_BURTA RecName: Full=Ribosome maturation factor rimP
 gi|166980214|sp|A3N8V6|RIMP_BURP6 RecName: Full=Ribosome maturation factor rimP
 gi|166980223|sp|A3NUK8|RIMP_BURP0 RecName: Full=Ribosome maturation factor rimP
 gi|166987486|sp|A2S2L3|RIMP_BURM9 RecName: Full=Ribosome maturation factor rimP
 gi|166990761|sp|A1V3N6|RIMP_BURMS RecName: Full=Ribosome maturation factor rimP
 gi|166990846|sp|A3MJW2|RIMP_BURM7 RecName: Full=Ribosome maturation factor rimP
 gi|52209948|emb|CAH35920.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52428246|gb|AAU48839.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
 gi|83654461|gb|ABC38524.1| Uncharacterized BCR, YhbC family COG0779 superfamily [Burkholderia
           thailandensis E264]
 gi|121229886|gb|ABM52404.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|124294091|gb|ABN03360.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
 gi|126219167|gb|ABN82673.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
 gi|126225964|gb|ABN89504.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
 gi|126241770|gb|ABO04863.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
 gi|134246439|gb|EBA46528.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
 gi|147749306|gb|EDK56380.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|147753475|gb|EDK60540.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|148027533|gb|EDK85554.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|157806885|gb|EDO84055.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
 gi|157936285|gb|EDO91955.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|160699737|gb|EDP89707.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|169654501|gb|EDS87194.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
 gi|184210522|gb|EDU07565.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|217393350|gb|EEC33371.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|225928294|gb|EEH24328.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|237503609|gb|ACQ95927.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
 gi|238522260|gb|EEP85705.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|242141078|gb|EES27480.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|243060318|gb|EES42504.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
          Length = 153

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 8/123 (6%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           ++ +++++  G +T+ DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MVCVYIDQPAG-ITIDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFTR 84

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSLLSA 170
           + G      +      ++   G +   +     LE E K+GE  M +  +A     +  A
Sbjct: 85  FAGSEAVITLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLA----DIDKA 140

Query: 171 RLI 173
           RLI
Sbjct: 141 RLI 143


>gi|89098597|ref|ZP_01171479.1| hypothetical protein B14911_00370 [Bacillus sp. NRRL B-14911]
 gi|89086559|gb|EAR65678.1| hypothetical protein B14911_00370 [Bacillus sp. NRRL B-14911]
          Length = 156

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 82/152 (53%), Gaps = 6/152 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P+++E++   V I  ++E K   L++F++++ G + + +C  +S+ +S  LD  
Sbjct: 8   VEELVTPIVDELNLELVDIEYVKEGKEWFLRVFIDKEQG-VDIEECGLVSERLSEKLDEL 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ ++ D+    G  V  +       ++   GK+  T   G 
Sbjct: 67  DPIPYNYFLEVSSPGAERPLKKEKDYKSAIGKNVLIKTYEPIDGEKTFEGKL--TQFDGE 124

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            +  E R +  +    I+I ++ + +ARL VT
Sbjct: 125 TVTVEVRVKTRIK--TISIPYEKVANARLAVT 154


>gi|76809648|ref|YP_333312.1| hypothetical protein BURPS1710b_1913 [Burkholderia pseudomallei
           1710b]
 gi|167911168|ref|ZP_02498259.1| hypothetical protein Bpse112_11783 [Burkholderia pseudomallei 112]
 gi|254259962|ref|ZP_04951016.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
 gi|91208395|sp|Q3JSZ1|RIMP_BURP1 RecName: Full=Ribosome maturation factor rimP
 gi|76579101|gb|ABA48576.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
 gi|254218651|gb|EET08035.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
          Length = 153

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 46/63 (73%), Gaps = 3/63 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           ++ +++++  G +T+ DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MVCVYIDQPAG-ITIDDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFTR 84

Query: 112 WNG 114
           + G
Sbjct: 85  FAG 87


>gi|302380608|ref|ZP_07269073.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
 gi|302311551|gb|EFK93567.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
          Length = 154

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 3/124 (2%)

Query: 29  IQPVIEE--MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           + P+I++  + F  V+ S    KN+L   ++E+DDG +++ DCE ++  IS  LD  + I
Sbjct: 14  LSPLIKDTGIEFYDVEYSNNNGKNIL-TFYIEKDDGLISIDDCELINNKISDKLDEIDPI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LE++S  I  P  R  DF +  G+VV   +      +++  G +   ++    LE
Sbjct: 73  SDPYYLEIASVDITTPFTRDKDFKKNLGNVVIVNLYQKLDSQKEFKGILKDFNDKEISLE 132

Query: 147 KEKR 150
            EK+
Sbjct: 133 LEKK 136


>gi|319957625|ref|YP_004168888.1| hypothetical protein Nitsa_1895 [Nitratifractor salsuginis DSM
           16511]
 gi|319420029|gb|ADV47139.1| protein of unknown function DUF150 [Nitratifractor salsuginis DSM
           16511]
          Length = 146

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E    + ++++ +D G + L  C ++S  +SP+LDV   + G Y LEVSSPGI+R + + 
Sbjct: 26  ENDQTIYRVYITKD-GGVDLDTCADISNDLSPLLDVHPPVGGKYFLEVSSPGIERTLKKP 84

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQI 160
             F    G  V  +I       +KL G +    E G  L + K GE   +  QI
Sbjct: 85  RHFQSAVGERVKLKIAGG----EKLRGILESADEEGIIL-RNKEGEHRYSYPQI 133


>gi|332976701|gb|EGK13539.1| hypothetical protein HMPREF9373_1208 [Psychrobacter sp. 1501(2011)]
          Length = 166

 Score = 53.9 bits (128), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 27/140 (19%)

Query: 52  LLQIFVER------DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVR 105
           LL+I++E        D  +T+ +C  ++  +S +L+V + I G Y LEVSSPG+DRP   
Sbjct: 38  LLRIYIESLPEDKAADKQVTIENCAAVTHQVSGVLEVHDPIAGEYVLEVSSPGLDRPFFA 97

Query: 106 KSDFLRWNGHVVACEIVLSSG----DKQKLIGKIMGTSETGFFLEKEKRGEKDMNEL--- 158
                 + G  +   ++ + G     ++K+ GK+            E+ G+K ++ +   
Sbjct: 98  PEQMTDYVGQTLNLRLIQAVGAGSSKRRKVTGKL------------EQLGDKQLSIVTPE 145

Query: 159 --QIAISFDSLLSARLIVTD 176
             Q  I+ D++  A LI  D
Sbjct: 146 GEQFDIALDNIDKANLIYQD 165


>gi|259016311|sp|Q7NFN6|RIMP_GLOVI RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 63/114 (55%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++++ +PV E++  + V ++     K   L++ +        L DCE++S+A+  +LD  
Sbjct: 10  VTALAEPVAEQLGLQLVAVAYQTHTKPATLRVDIRHPTEGTGLDDCEKMSRALEALLDTR 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           +++I G Y LEVSSPG++R +    +F+ + G  V  +       K++  G+++
Sbjct: 70  DDLIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFGPVDGKKQWEGRLL 123


>gi|78776877|ref|YP_393192.1| hypothetical protein Suden_0678 [Sulfurimonas denitrificans DSM
           1251]
 gi|91208367|sp|Q30SS4|RIMP_SULDN RecName: Full=Ribosome maturation factor rimP
 gi|78497417|gb|ABB43957.1| Protein of unknown function DUF150 [Sulfurimonas denitrificans DSM
           1251]
          Length = 149

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 12/108 (11%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           ++L +C  LS+ ISP+LDV   + G YRLEV +PGI+R +     F+   G  VA    L
Sbjct: 49  VSLDECVHLSRLISPLLDVTPPMSGEYRLEVGTPGIERKVSTLKQFVLSIGERVA----L 104

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +   K+KL G ++   E+  +L        D++  ++ + F  +  A+
Sbjct: 105 TLKSKEKLKGLLLRVEESNIYL--------DVDAEEVCVEFAQISKAK 144


>gi|255319714|ref|ZP_05360922.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
 gi|262380004|ref|ZP_06073159.1| UPF0090 protein [Acinetobacter radioresistens SH164]
 gi|255303243|gb|EET82452.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
 gi|262298198|gb|EEY86112.1| UPF0090 protein [Acinetobacter radioresistens SH164]
          Length = 174

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 18/132 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-----------DDGNMT------L 66
           +  +I P +E        I  L + K  L++IF+++           +DG +       +
Sbjct: 10  LHDLIAPAVEACDVELWGIEFLPQGKRSLVRIFIDKPVDENAEPVLNEDGELEQGRGIGV 69

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DC  ++Q +  ILDV + I G Y LEVSSPG DRP  +      + G  VA  ++ +  
Sbjct: 70  QDCVRVTQQVGAILDVHDPISGEYSLEVSSPGWDRPFFQLEQMSAYIGQQVALRLISAVD 129

Query: 127 DKQKLIGKIMGT 138
           +++K   K++  
Sbjct: 130 NRRKFQAKLVSV 141


>gi|187923622|ref|YP_001895264.1| hypothetical protein Bphyt_1630 [Burkholderia phytofirmans PsJN]
 gi|226736380|sp|B2T379|RIMP_BURPP RecName: Full=Ribosome maturation factor rimP
 gi|187714816|gb|ACD16040.1| protein of unknown function DUF150 [Burkholderia phytofirmans PsJN]
          Length = 152

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 46/66 (69%), Gaps = 3/66 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G + + DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-IAIEDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVV 117
           + G  V
Sbjct: 85  FAGSEV 90


>gi|91782987|ref|YP_558193.1| hypothetical protein Bxe_A2822 [Burkholderia xenovorans LB400]
 gi|296158770|ref|ZP_06841599.1| protein of unknown function DUF150 [Burkholderia sp. Ch1-1]
 gi|123358892|sp|Q140U8|RIMP_BURXL RecName: Full=Ribosome maturation factor rimP
 gi|91686941|gb|ABE30141.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
 gi|295890975|gb|EFG70764.1| protein of unknown function DUF150 [Burkholderia sp. Ch1-1]
          Length = 152

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 46/66 (69%), Gaps = 3/66 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G + + DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-IAIEDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNGHVV 117
           + G  V
Sbjct: 85  FAGSEV 90


>gi|332704825|ref|ZP_08424913.1| Ribosome maturation factor rimP [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554974|gb|EGJ52018.1| Ribosome maturation factor rimP [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 170

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 12/154 (7%)

Query: 25  ISSVIQPVIEEM--SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           I+   + VIE M  S   V+I +L+ +   + ++VE   G +++    E S+ I  +LDV
Sbjct: 11  IAQAARTVIEPMGLSLWGVEI-VLDGRGQTVLVYVESPTG-VSVEQLAEASRNIGLVLDV 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G YRLE+SSPG +R          + G  V     +  GD++K  G +    E  
Sbjct: 69  EDFIPGTYRLELSSPGFERSFFSTEQMRDYMGEKVEIRTSVPLGDRRKFRGILKEVREDS 128

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
             +E E +           + ++ +  ARLIV D
Sbjct: 129 IAVEAEGQ--------LFNLRWEDVKKARLIVED 154


>gi|332528134|ref|ZP_08404165.1| hypothetical protein RBXJA2T_19301 [Rubrivivax benzoatilyticus JA2]
 gi|332112705|gb|EGJ12498.1| hypothetical protein RBXJA2T_19301 [Rubrivivax benzoatilyticus JA2]
          Length = 194

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 10/72 (13%)

Query: 52  LLQIFVERDDGN--------MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPM 103
           LL++ ++R  G+        +T+ DCE +++ +  +L+VEN+   + RLEVSSPG+DRP+
Sbjct: 46  LLRVTIDRVPGHAYPVEGEFVTVEDCEAVTRQLQYVLEVENV--DYERLEVSSPGLDRPL 103

Query: 104 VRKSDFLRWNGH 115
            R +D+ R++G 
Sbjct: 104 RRAADYERFSGQ 115


>gi|169634555|ref|YP_001708291.1| hypothetical protein ABSDF3182 [Acinetobacter baumannii SDF]
 gi|226703734|sp|B0VLU4|RIMP_ACIBS RecName: Full=Ribosome maturation factor rimP
 gi|169153347|emb|CAP02460.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 174

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 18/129 (13%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-----------DDG------NMTLRDC 69
           +I P +E        I  L + K  LL+I+++R           +DG       + + DC
Sbjct: 13  MIAPAVEACGVDLWGIEFLPQGKRSLLRIYIDRTVDENAEPVINEDGEVEQGRGIGVEDC 72

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
             ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  VA  ++ +  +++
Sbjct: 73  VRVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLEQLQGYIGQQVALRLIAAVENRR 132

Query: 130 KLIGKIMGT 138
           K   K++  
Sbjct: 133 KFQAKLLAV 141


>gi|170696461|ref|ZP_02887587.1| protein of unknown function DUF150 [Burkholderia graminis C4D1M]
 gi|209520194|ref|ZP_03268965.1| protein of unknown function DUF150 [Burkholderia sp. H160]
 gi|295676259|ref|YP_003604783.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1002]
 gi|307730030|ref|YP_003907254.1| hypothetical protein BC1003_2000 [Burkholderia sp. CCGE1003]
 gi|323525723|ref|YP_004227876.1| hypothetical protein BC1001_1380 [Burkholderia sp. CCGE1001]
 gi|170138614|gb|EDT06816.1| protein of unknown function DUF150 [Burkholderia graminis C4D1M]
 gi|209499353|gb|EDZ99437.1| protein of unknown function DUF150 [Burkholderia sp. H160]
 gi|295436102|gb|ADG15272.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1002]
 gi|307584565|gb|ADN57963.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1003]
 gi|323382725|gb|ADX54816.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1001]
          Length = 152

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 45/63 (71%), Gaps = 3/63 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G + + DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-IAIEDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNG 114
           + G
Sbjct: 85  FAG 87


>gi|186476489|ref|YP_001857959.1| hypothetical protein Bphy_1731 [Burkholderia phymatum STM815]
 gi|226736435|sp|B2JKT6|RIMP_BURP8 RecName: Full=Ribosome maturation factor rimP
 gi|184192948|gb|ACC70913.1| protein of unknown function DUF150 [Burkholderia phymatum STM815]
          Length = 152

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 45/63 (71%), Gaps = 3/63 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I++++  G + + DCE++++ +  +L VENI   + RLEVSSPG+DRP+ + +DF R
Sbjct: 28  MLCIYIDQPAG-IAIEDCEKVTRQLQHVLTVENI--DYERLEVSSPGLDRPLKKLADFER 84

Query: 112 WNG 114
           + G
Sbjct: 85  FAG 87


>gi|21282877|ref|NP_645965.1| hypothetical protein MW1148 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49483428|ref|YP_040652.1| hypothetical protein SAR1241 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486104|ref|YP_043325.1| hypothetical protein SAS1199 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651835|ref|YP_186141.1| hypothetical protein SACOL1284 [Staphylococcus aureus subsp. aureus
           COL]
 gi|82750866|ref|YP_416607.1| hypothetical protein SAB1127 [Staphylococcus aureus RF122]
 gi|87160896|ref|YP_493855.1| hypothetical protein SAUSA300_1158 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194975|ref|YP_499775.1| hypothetical protein SAOUHSC_01242 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221387|ref|YP_001332209.1| hypothetical protein NWMN_1175 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509431|ref|YP_001575090.1| hypothetical protein USA300HOU_1197 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142499|ref|ZP_03566992.1| hypothetical protein SauraJ_12822 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253731884|ref|ZP_04866049.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257425319|ref|ZP_05601744.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427980|ref|ZP_05604378.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430613|ref|ZP_05606995.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433373|ref|ZP_05609731.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436215|ref|ZP_05612262.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|258423894|ref|ZP_05686779.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|258452564|ref|ZP_05700570.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|262048157|ref|ZP_06021044.1| hypothetical protein SAD30_1933 [Staphylococcus aureus D30]
 gi|262051327|ref|ZP_06023550.1| hypothetical protein SA930_2049 [Staphylococcus aureus 930918-3]
 gi|282903820|ref|ZP_06311708.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|282905583|ref|ZP_06313438.1| hypothetical protein SDAG_01207 [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282908558|ref|ZP_06316388.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910837|ref|ZP_06318640.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914042|ref|ZP_06321829.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282916525|ref|ZP_06324283.1| hypothetical protein SATG_00018 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282918964|ref|ZP_06326699.1| hypothetical protein SASG_00270 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282920509|ref|ZP_06328230.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282924087|ref|ZP_06331763.1| hypothetical protein SARG_01628 [Staphylococcus aureus subsp.
           aureus C101]
 gi|283770329|ref|ZP_06343221.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958008|ref|ZP_06375459.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024258|ref|ZP_06378656.1| hypothetical protein Saura13_06684 [Staphylococcus aureus subsp.
           aureus 132]
 gi|293501074|ref|ZP_06666925.1| hypothetical protein SCAG_01604 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510036|ref|ZP_06668744.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526622|ref|ZP_06671307.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294848261|ref|ZP_06789008.1| hypothetical protein SKAG_00320 [Staphylococcus aureus A9754]
 gi|295427752|ref|ZP_06820384.1| UPF0090 protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297208089|ref|ZP_06924520.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297591290|ref|ZP_06949928.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus MN8]
 gi|300912170|ref|ZP_07129613.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304381171|ref|ZP_07363824.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|34222911|sp|Q8NWZ3|RIMP_STAAW RecName: Full=Ribosome maturation factor rimP
 gi|56749717|sp|Q6G9U8|RIMP_STAAS RecName: Full=Ribosome maturation factor rimP
 gi|56749746|sp|Q6GHH0|RIMP_STAAR RecName: Full=Ribosome maturation factor rimP
 gi|81694636|sp|Q5HGG6|RIMP_STAAC RecName: Full=Ribosome maturation factor rimP
 gi|91207999|sp|Q2YXK3|RIMP_STAAB RecName: Full=Ribosome maturation factor rimP
 gi|122540592|sp|Q2G2D3|RIMP_STAA8 RecName: Full=Ribosome maturation factor rimP
 gi|123486179|sp|Q2FHH3|RIMP_STAA3 RecName: Full=Ribosome maturation factor rimP
 gi|189038628|sp|A8Z3U5|RIMP_STAAT RecName: Full=Ribosome maturation factor rimP
 gi|205405730|sp|A6QGG5|RIMP_STAAE RecName: Full=Ribosome maturation factor rimP
 gi|21204316|dbj|BAB95013.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49241557|emb|CAG40243.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244547|emb|CAG42976.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286021|gb|AAW38115.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|82656397|emb|CAI80816.1| conserved hypothetical protein [Staphylococcus aureus RF122]
 gi|87126870|gb|ABD21384.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202533|gb|ABD30343.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374187|dbj|BAF67447.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368240|gb|ABX29211.1| hypothetical protein USA300HOU_1197 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253724294|gb|EES93023.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257271776|gb|EEV03914.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274821|gb|EEV06308.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278741|gb|EEV09360.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281466|gb|EEV11603.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284497|gb|EEV14617.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257845923|gb|EEV69952.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|257859782|gb|EEV82624.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|259160702|gb|EEW45723.1| hypothetical protein SA930_2049 [Staphylococcus aureus 930918-3]
 gi|259163723|gb|EEW48278.1| hypothetical protein SAD30_1933 [Staphylococcus aureus D30]
 gi|269940756|emb|CBI49138.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282314059|gb|EFB44451.1| hypothetical protein SARG_01628 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316774|gb|EFB47148.1| hypothetical protein SASG_00270 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282319012|gb|EFB49364.1| hypothetical protein SATG_00018 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282322110|gb|EFB52434.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282325442|gb|EFB55751.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327620|gb|EFB57903.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330875|gb|EFB60389.1| hypothetical protein SDAG_01207 [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282594171|gb|EFB99158.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282595438|gb|EFC00402.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|283460476|gb|EFC07566.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
 gi|283470480|emb|CAQ49691.1| protein LMOf2365_1338 [Staphylococcus aureus subsp. aureus ST398]
 gi|283790157|gb|EFC28974.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920694|gb|EFD97757.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096079|gb|EFE26340.1| hypothetical protein SCAG_01604 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466980|gb|EFF09498.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M809]
 gi|294825061|gb|EFG41483.1| hypothetical protein SKAG_00320 [Staphylococcus aureus A9754]
 gi|295128110|gb|EFG57744.1| UPF0090 protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296887332|gb|EFH26234.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297576176|gb|EFH94892.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus MN8]
 gi|298694557|gb|ADI97779.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300886416|gb|EFK81618.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|302332871|gb|ADL23064.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751088|gb|ADL65265.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340154|gb|EFM06095.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312438355|gb|ADQ77426.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315194153|gb|EFU24546.1| hypothetical protein CGSSa00_05608 [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315198507|gb|EFU28836.1| hypothetical protein CGSSa01_02741 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140918|gb|EFW32765.1| hypothetical protein HMPREF9528_00535 [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144366|gb|EFW36132.1| hypothetical protein HMPREF9529_00249 [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323441045|gb|EGA98752.1| hypothetical protein SAO11_0112 [Staphylococcus aureus O11]
 gi|323443914|gb|EGB01525.1| hypothetical protein SAO46_0024 [Staphylococcus aureus O46]
 gi|329313935|gb|AEB88348.1| Ribosome maturation factor rimP [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727856|gb|EGG64307.1| hypothetical protein SA21189_0300 [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329733678|gb|EGG70006.1| hypothetical protein SA21193_0242 [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 155

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +++P++E+++F  V +  ++E ++  L+I ++++ G + L DC   S+ IS  +D  
Sbjct: 8   VEVIVKPIMEDLNFELVDVEYVKEGRDHFLRISIDKE-GGVDLNDCTLASEKISEAMDAN 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I   Y L+V+SPG +RP+ ++ DF
Sbjct: 67  DPIPEMYYLDVASPGAERPIKKEQDF 92


>gi|300312900|ref|YP_003776992.1| hypothetical protein Hsero_3606 [Herbaspirillum seropedicae SmR1]
 gi|300075685|gb|ADJ65084.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 164

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 12/77 (15%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           ++T+ DCE+ +  +  +  VEN++  + RLEVSSPG+DRP+ + SDF+R+    V CE V
Sbjct: 46  SITVEDCEKATHQLLHVFTVENVL--YERLEVSSPGLDRPLKKFSDFVRF----VDCEAV 99

Query: 123 LSSGDKQKLIGKIMGTS 139
           +      KL   + GTS
Sbjct: 100 I------KLRVPLPGTS 110


>gi|159162465|pdb|1IB8|A Chain A, Solution Structure And Function Of A Conserved Protein
           Sp14.3 Encoded By An Essential Streptococcus Pneumoniae
           Gene
          Length = 164

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 7/153 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 14  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPVLDTI 71

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 72  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 130

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +E   +  K   ++  ++   + L+ +L+
Sbjct: 131 DELTMEYMDKTRKKTVQIPYSLVSKARLAVKLL 163


>gi|328950380|ref|YP_004367715.1| Ribosome maturation factor rimP [Marinithermus hydrothermalis DSM
           14884]
 gi|328450704|gb|AEB11605.1| Ribosome maturation factor rimP [Marinithermus hydrothermalis DSM
           14884]
          Length = 147

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 7/115 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISPILD 81
           ++ +VI+ V+  + +  ++++L    K  +L + +ER D+  ++  D E  SQ IS  LD
Sbjct: 2   ELWNVIEAVVRPLGYEVLEVTLKGGGKTRVLTVRLERADEQPISFADLERASQVISLELD 61

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             + I G YRLEV SPG DRP++    F R+ G     +      D+ +  G+I+
Sbjct: 62  RLDPIPGAYRLEVESPGPDRPLITARHFERFMGLKAKVQ-----SDEGRFTGRIV 111


>gi|260550520|ref|ZP_05824730.1| UPF0090 protein [Acinetobacter sp. RUH2624]
 gi|260406435|gb|EEW99917.1| UPF0090 protein [Acinetobacter sp. RUH2624]
          Length = 174

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 18/129 (13%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-----------DDG------NMTLRDC 69
           +I P ++        I  L + K  LL+I+++R           +DG       + ++DC
Sbjct: 13  MIAPAVQACGVDLWGIEFLPQGKRSLLRIYIDRPVDENAEPVINEDGEVEQGRGIGVQDC 72

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
             ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  VA  ++ +  +++
Sbjct: 73  VRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQSYIGQQVALRLIAAVENRR 132

Query: 130 KLIGKIMGT 138
           K   K++  
Sbjct: 133 KFQAKLLAV 141


>gi|284992352|ref|YP_003410906.1| hypothetical protein Gobs_3968 [Geodermatophilus obscurus DSM
           43160]
 gi|284065597|gb|ADB76535.1| protein of unknown function DUF150 [Geodermatophilus obscurus DSM
           43160]
          Length = 196

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 8/160 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  ++ ++ PV+E   +   ++ +    +  ++++ V+RD G +TL D  E+S+A+S  
Sbjct: 10  VATRMAGLVAPVVEAAGYDLEELVVTPAGRRSIVRVVVDRDAG-VTLDDVAEVSRAVSTA 68

Query: 80  LDVEN--IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD  +       Y LEV+SPG+DRP+     + R  G +V    V   G  +++  +++ 
Sbjct: 69  LDEHDGEFGSAPYVLEVTSPGVDRPLTEPRHWRRNTGRLVTV-AVGREGSSEQVTARVLE 127

Query: 138 TSETGFFL---EKEKRGEKDMNELQIAISFDSLLSARLIV 174
               G  L    K K G K     +  + +  L + R+ V
Sbjct: 128 VDGDGVTLAVEAKGKPGAKKRPPTRRQVPWQELGAGRVQV 167


>gi|50083627|ref|YP_045137.1| hypothetical protein ACIAD0367 [Acinetobacter sp. ADP1]
 gi|51316595|sp|Q6FF42|RIMP_ACIAD RecName: Full=Ribosome maturation factor rimP
 gi|49529603|emb|CAG67315.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
          Length = 174

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 18/130 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-----------DDGNMTL------ 66
           +  +I P ++        I  + + K  LL+IF+++           +DG   L      
Sbjct: 10  LHDLIAPAVQACDVNLWGIEFIPQGKRSLLRIFIDKPVDETAEPVLNEDGETELGRGIGV 69

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DC  ++Q +  ILDV + I G Y LEVSSPG DRP  +      + G  VA  ++ +  
Sbjct: 70  QDCVRVTQQVGAILDVHDPISGEYALEVSSPGWDRPFFQLEQMSAYIGQQVALRLISAVE 129

Query: 127 DKQKLIGKIM 136
           +++K   K++
Sbjct: 130 NRRKFQAKLL 139


>gi|228474945|ref|ZP_04059673.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|314936574|ref|ZP_07843921.1| conserved hypothetical protein [Staphylococcus hominis subsp.
           hominis C80]
 gi|228270930|gb|EEK12318.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|313655193|gb|EFS18938.1| conserved hypothetical protein [Staphylococcus hominis subsp.
           hominis C80]
          Length = 155

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 56/90 (62%), Gaps = 2/90 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++ ++I P++++++F  V +   +E K+  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   ITEEVETIITPILDDLNFELVDVEYAKEGKDRFLRISIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           +D  + I   Y L+V+SPG +RP+ ++ D+
Sbjct: 63  MDQNDPIPEMYYLDVASPGAERPLKKEKDY 92


>gi|169797409|ref|YP_001715202.1| hypothetical protein ABAYE3440 [Acinetobacter baumannii AYE]
 gi|184156668|ref|YP_001845007.1| hypothetical protein ACICU_00348 [Acinetobacter baumannii ACICU]
 gi|213155777|ref|YP_002317822.1| hypothetical protein AB57_0413 [Acinetobacter baumannii AB0057]
 gi|215484848|ref|YP_002327085.1| hypothetical protein ABBFA_003201 [Acinetobacter baumannii
           AB307-0294]
 gi|239500932|ref|ZP_04660242.1| hypothetical protein AbauAB_01325 [Acinetobacter baumannii AB900]
 gi|260556301|ref|ZP_05828520.1| UPF0090 protein [Acinetobacter baumannii ATCC 19606]
 gi|301346316|ref|ZP_07227057.1| hypothetical protein AbauAB0_08725 [Acinetobacter baumannii AB056]
 gi|301513269|ref|ZP_07238506.1| hypothetical protein AbauAB05_16841 [Acinetobacter baumannii AB058]
 gi|301596449|ref|ZP_07241457.1| hypothetical protein AbauAB059_11562 [Acinetobacter baumannii
           AB059]
 gi|332855374|ref|ZP_08435839.1| hypothetical protein HMPREF0021_03428 [Acinetobacter baumannii
           6013150]
 gi|332867630|ref|ZP_08437762.1| hypothetical protein HMPREF0020_01378 [Acinetobacter baumannii
           6013113]
 gi|332873076|ref|ZP_08441033.1| hypothetical protein HMPREF0022_00636 [Acinetobacter baumannii
           6014059]
 gi|226703746|sp|B7H117|RIMP_ACIB3 RecName: Full=Ribosome maturation factor rimP
 gi|226703825|sp|B0VE83|RIMP_ACIBY RecName: Full=Ribosome maturation factor rimP
 gi|226703842|sp|B2I2M5|RIMP_ACIBC RecName: Full=Ribosome maturation factor rimP
 gi|226703866|sp|A3M1K2|RIMP_ACIBT RecName: Full=Ribosome maturation factor rimP
 gi|226706136|sp|B7I3R7|RIMP_ACIB5 RecName: Full=Ribosome maturation factor rimP
 gi|169150336|emb|CAM88233.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|183208262|gb|ACC55660.1| uncharacterized protein conserved in bacteria [Acinetobacter
           baumannii ACICU]
 gi|193076181|gb|ABO10796.2| hypothetical protein A1S_0334 [Acinetobacter baumannii ATCC 17978]
 gi|213054937|gb|ACJ39839.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
 gi|213988150|gb|ACJ58449.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|260410356|gb|EEX03655.1| UPF0090 protein [Acinetobacter baumannii ATCC 19606]
 gi|322506555|gb|ADX02009.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
 gi|323516434|gb|ADX90815.1| hypothetical protein ABTW07_0378 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727506|gb|EGJ58932.1| hypothetical protein HMPREF0021_03428 [Acinetobacter baumannii
           6013150]
 gi|332733824|gb|EGJ64971.1| hypothetical protein HMPREF0020_01378 [Acinetobacter baumannii
           6013113]
 gi|332738588|gb|EGJ69458.1| hypothetical protein HMPREF0022_00636 [Acinetobacter baumannii
           6014059]
          Length = 174

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 18/129 (13%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-----------DDG------NMTLRDC 69
           +I P +E        I  L + K  LL+I+++R           +DG       + + DC
Sbjct: 13  MIAPAVEACGVDLWGIEFLPQGKRSLLRIYIDRPVDENAEPVINEDGEVEQGRGIGVEDC 72

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
             ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  VA  ++ +  +++
Sbjct: 73  VRVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLEQLQGYIGQQVALRLIAAVENRR 132

Query: 130 KLIGKIMGT 138
           K   K++  
Sbjct: 133 KFQAKLLAV 141


>gi|257066113|ref|YP_003152369.1| hypothetical protein Apre_0606 [Anaerococcus prevotii DSM 20548]
 gi|256797993|gb|ACV28648.1| protein of unknown function DUF150 [Anaerococcus prevotii DSM
           20548]
          Length = 147

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 11/152 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  + +  IE + +  V I    +KN  +L  F+   DG +T+ DCE++S  + 
Sbjct: 1   MDLTKRLKEIFEADIENLGYELVDIEFKGQKNNKILTFFIYNKDG-ITIEDCEKVSAFLD 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  +II+  Y LEVSS  + RP+    D  R    ++  ++     D +  +GKI+ 
Sbjct: 60  EKLDEIDIIKDSYYLEVSSQDLSRPIKTDRDLERNKDELLKIKL----KDGEIFLGKIIN 115

Query: 138 TSET--GFFLEKEKR---GEKDMNELQIAISF 164
             E    F LE E      ++D+ E+ I I F
Sbjct: 116 IGEDFYEFILEDENTKNIKKEDVKEIYIEIVF 147


>gi|284052677|ref|ZP_06382887.1| hypothetical protein AplaP_14508 [Arthrospira platensis str.
           Paraca]
 gi|291568134|dbj|BAI90406.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 153

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 53/103 (51%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           +K  +L++ +   + + +L DCE +S+A+   LD  ++I   Y LEVSSPG+ R +    
Sbjct: 33  QKPPVLRVDIRNLEQDTSLEDCERMSRALEEQLDAVDVIPDAYILEVSSPGVSRSLSCDR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
           DF+ + G  V           ++  GK++G  E    + ++ R
Sbjct: 93  DFISFKGFPVTVTTSEPYKGHKQQTGKLVGRDEMAVHINQKGR 135


>gi|217077787|ref|YP_002335505.1| hypothetical protein THA_1728 [Thermosipho africanus TCF52B]
 gi|259645125|sp|B7IDT7|RIMP_THEAB RecName: Full=Ribosome maturation factor rimP
 gi|217037642|gb|ACJ76164.1| hypothetical protein THA_1728 [Thermosipho africanus TCF52B]
          Length = 148

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 5/110 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
            L+I ++     ++ +DCE +S+ +   LD  +II   Y L VSSPG+DRP+    DF R
Sbjct: 36  FLEIVIDNPLDYVSTKDCENISREVEFQLDKLDIIPQRYYLTVSSPGLDRPLRSIDDFKR 95

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIA 161
           +  + V  ++     + + +IG I    ++  FLE+  +  K++   QI 
Sbjct: 96  FINNKVKIKL-----ENETIIGYIKDVKDSVIFLEENNKKIKEIKYNQIK 140


>gi|77359941|ref|YP_339516.1| hypothetical protein PSHAa0995 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874852|emb|CAI86073.1| conserved protein of unknown function (yhbC) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 141

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 2/113 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P +E + F    +  ++  ++  L++++  + G +++ +C + S+ IS ILDVE+ I
Sbjct: 1   MLTPAVEMLGFELHGLEFVQAGRHSTLRVYITHEAG-ISVDNCADASRQISAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
              Y LEVSSPG+DR + ++  + +  G  V     L    ++   G ++  +
Sbjct: 60  TNEYDLEVSSPGVDRLLFKQDHYEQAQGEEVQLRTKLPQDGRRNFKGDLIAVT 112


>gi|291543556|emb|CBL16665.1| Uncharacterized protein conserved in bacteria [Ruminococcus sp.
           18P13]
          Length = 158

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 7/111 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
            LA  ++  +  VI ++ F        E  +  L++F+++D+G +++ DCE +S+ +S +
Sbjct: 15  ALAAPLAESLGLVIWDVRFEK------EGASWYLRVFIDKDEG-ISIDDCEAMSRPLSDL 67

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           LD  + I+  Y LEV S G++R +VR+S F    G VV   ++      QK
Sbjct: 68  LDEADPIDQQYFLEVGSAGLERDLVRESHFAASIGAVVRMRLIRPDETGQK 118


>gi|257094535|ref|YP_003168176.1| hypothetical protein CAP2UW1_2969 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047059|gb|ACV36247.1| protein of unknown function DUF150 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 155

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 65/119 (54%), Gaps = 5/119 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER--DDGNMTLRDCEELSQAISPILD 81
           D+  V++  +  + ++ V +     +  +L++F+++      + + DC  +S  ++ +L 
Sbjct: 2   DLHEVLEVTVTGLGYQLVDVER-SPRGRVLRVFIDKPAKPRGVDVEDCALVSNQLTRVLL 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           VENI   + RLEVSSPG+DRP+ ++ DF R+ G  V  ++ L    ++   G + G  +
Sbjct: 61  VENI--DYERLEVSSPGLDRPLTKEVDFERFAGSEVTIKLRLPLNGRRNFAGVLHGAQD 117


>gi|298528713|ref|ZP_07016117.1| protein of unknown function DUF150 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512365|gb|EFI36267.1| protein of unknown function DUF150 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 154

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L++FV+  +G +++  C +LS+ +S  LDVE+++ G Y LEVSSPG++R   R      
Sbjct: 40  VLRVFVDSPEG-VSIDQCADLSRQLSVALDVEDLVPGSYNLEVSSPGLNRRFFRPEQMSG 98

Query: 112 WNGHVV 117
           + GH V
Sbjct: 99  YTGHKV 104


>gi|168482792|ref|ZP_02707744.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|303260041|ref|ZP_07346014.1| hypothetical protein CGSSp9vBS293_01125 [Streptococcus pneumoniae
           SP-BS293]
 gi|303261225|ref|ZP_07347173.1| hypothetical protein CGSSp14BS292_07790 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303263890|ref|ZP_07349811.1| hypothetical protein CGSSpBS397_04757 [Streptococcus pneumoniae
           BS397]
 gi|303267074|ref|ZP_07352945.1| hypothetical protein CGSSpBS457_10002 [Streptococcus pneumoniae
           BS457]
 gi|303269289|ref|ZP_07355063.1| hypothetical protein CGSSpBS458_08806 [Streptococcus pneumoniae
           BS458]
 gi|172043720|gb|EDT51766.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|302637359|gb|EFL67846.1| hypothetical protein CGSSp14BS292_07790 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638736|gb|EFL69198.1| hypothetical protein CGSSpBS293_01125 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641186|gb|EFL71559.1| hypothetical protein CGSSpBS458_08806 [Streptococcus pneumoniae
           BS458]
 gi|302643402|gb|EFL73678.1| hypothetical protein CGSSpBS457_10002 [Streptococcus pneumoniae
           BS457]
 gi|302646295|gb|EFL76521.1| hypothetical protein CGSSpBS397_04757 [Streptococcus pneumoniae
           BS397]
          Length = 175

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 27  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPVLDTI 84

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 85  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 143

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E   +  K   ++  ++   + L+ +L
Sbjct: 144 DELTMEYMDKTRKKTVQIPYSLVSKARLAVKL 175


>gi|148983930|ref|ZP_01817249.1| hypothetical protein CGSSp3BS71_07349 [Streptococcus pneumoniae
           SP3-BS71]
 gi|148990070|ref|ZP_01821324.1| hypothetical protein CGSSp6BS73_05420 [Streptococcus pneumoniae
           SP6-BS73]
 gi|148992338|ref|ZP_01822061.1| hypothetical protein CGSSp9BS68_06575 [Streptococcus pneumoniae
           SP9-BS68]
 gi|148998225|ref|ZP_01825694.1| hypothetical protein CGSSp11BS70_03456 [Streptococcus pneumoniae
           SP11-BS70]
 gi|168485663|ref|ZP_02710171.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|168490558|ref|ZP_02714701.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|168576546|ref|ZP_02722420.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|225854093|ref|YP_002735605.1| hypothetical protein SPJ_0512 [Streptococcus pneumoniae JJA]
 gi|225856262|ref|YP_002737773.1| hypothetical protein SPP_0569 [Streptococcus pneumoniae P1031]
 gi|225860557|ref|YP_002742066.1| hypothetical protein SPT_0582 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|237650176|ref|ZP_04524428.1| hypothetical protein SpneC1_05532 [Streptococcus pneumoniae CCRI
           1974]
 gi|237821776|ref|ZP_04597621.1| hypothetical protein SpneC19_05602 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|298230908|ref|ZP_06964589.1| hypothetical protein SpneCMD_09588 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255626|ref|ZP_06979212.1| hypothetical protein SpneCM_08527 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298502346|ref|YP_003724286.1| hypothetical protein HMPREF0837_10844 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|303255253|ref|ZP_07341326.1| hypothetical protein CGSSpBS455_07226 [Streptococcus pneumoniae
           BS455]
 gi|307709806|ref|ZP_07646257.1| conserved hypothetical protein [Streptococcus mitis SK564]
 gi|254806452|sp|C1CCT4|RIMP_STRZJ RecName: Full=Ribosome maturation factor rimP
 gi|254806512|sp|C1CJ35|RIMP_STRZP RecName: Full=Ribosome maturation factor rimP
 gi|254806519|sp|C1CQ44|RIMP_STRZT RecName: Full=Ribosome maturation factor rimP
 gi|259586203|sp|C1C5S4|RIMP_STRP7 RecName: Full=Ribosome maturation factor rimP
 gi|259586204|sp|B2IME0|RIMP_STRPS RecName: Full=Ribosome maturation factor rimP
 gi|147755868|gb|EDK62912.1| hypothetical protein CGSSp11BS70_03456 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147924077|gb|EDK75189.1| hypothetical protein CGSSp3BS71_07349 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147924596|gb|EDK75683.1| hypothetical protein CGSSp6BS73_05420 [Streptococcus pneumoniae
           SP6-BS73]
 gi|147928964|gb|EDK79976.1| hypothetical protein CGSSp9BS68_06575 [Streptococcus pneumoniae
           SP9-BS68]
 gi|183571099|gb|EDT91627.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|183574915|gb|EDT95443.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|183577690|gb|EDT98218.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|225722728|gb|ACO18581.1| conserved hypothetical protein [Streptococcus pneumoniae JJA]
 gi|225725938|gb|ACO21790.1| conserved hypothetical protein [Streptococcus pneumoniae P1031]
 gi|225727228|gb|ACO23079.1| conserved hypothetical protein [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237941|gb|ADI69072.1| protein of hypothetical function DUF150 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301799609|emb|CBW32164.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
 gi|301801433|emb|CBW34120.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
 gi|302597794|gb|EFL64867.1| hypothetical protein CGSSpBS455_07226 [Streptococcus pneumoniae
           BS455]
 gi|307619508|gb|EFN98633.1| conserved hypothetical protein [Streptococcus mitis SK564]
 gi|327390292|gb|EGE88633.1| hypothetical protein SPAR5_0534 [Streptococcus pneumoniae GA04375]
 gi|332076388|gb|EGI86851.1| hypothetical protein SPAR68_0575 [Streptococcus pneumoniae GA41301]
 gi|332202436|gb|EGJ16505.1| hypothetical protein SPAR69_0547 [Streptococcus pneumoniae GA41317]
 gi|332203717|gb|EGJ17784.1| hypothetical protein SPAR93_0588 [Streptococcus pneumoniae GA47368]
          Length = 159

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPVLDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K    +QI  S  S   ARL V
Sbjct: 128 DELTMEYMDKTRK--KTVQIPYSLVS--KARLAV 157


>gi|297180709|gb|ADI16918.1| uncharacterized protein conserved in bacteria [uncultured gamma
           proteobacterium HF0010_16J05]
          Length = 171

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 10/152 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  +I P +E +      I  L + K   L I++ER DG + +  C  +S+ +  +LDVE
Sbjct: 27  IEELIAPTVESLGCEVWGIEYLSQGKYSKLLIYIERADG-IDVDLCATVSKHVGDLLDVE 85

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +I   Y LEVSSPG+DR + ++  +L   G  V   +      ++++ G + G  +   
Sbjct: 86  ELISSRYTLEVSSPGMDRVLFKEQHYLDHVGERVEIRLNYPFEGRKRISGILAGIEDQTA 145

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            +++         E +  +  +++  ARL+ T
Sbjct: 146 IVQE--------AEDEFLLPLENVQKARLVPT 169


>gi|332707467|ref|ZP_08427515.1| hypothetical protein LYNGBM3L_38480 [Lyngbya majuscula 3L]
 gi|332353764|gb|EGJ33256.1| hypothetical protein LYNGBM3L_38480 [Lyngbya majuscula 3L]
          Length = 153

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 54/100 (54%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L++++     + +L DCE +S+A+   LD + II   Y LE+SSPGI + +    +F+ 
Sbjct: 37  VLRVYIRNPIRDTSLDDCERMSRALEAQLDAKEIILDTYVLEISSPGITQDLTTDREFIS 96

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           + G  V  +       +Q+  G+++   E+G +L  + R 
Sbjct: 97  FKGFGVIVQTFEPYQGQQEWRGQLIRRDESGVYLNLKGRA 136


>gi|307705616|ref|ZP_07642468.1| conserved hypothetical protein [Streptococcus mitis SK597]
 gi|307620893|gb|EFN99977.1| conserved hypothetical protein [Streptococcus mitis SK597]
          Length = 159

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPVLDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K    +QI  S  S   ARL V
Sbjct: 128 EELTMEYMDKTRK--KTVQIPYSLVS--KARLAV 157


>gi|182683485|ref|YP_001835232.1| hypothetical protein SPCG_0515 [Streptococcus pneumoniae CGSP14]
 gi|225858390|ref|YP_002739900.1| hypothetical protein SP70585_0612 [Streptococcus pneumoniae 70585]
 gi|182628819|gb|ACB89767.1| hypothetical protein SPCG_0515 [Streptococcus pneumoniae CGSP14]
 gi|225720853|gb|ACO16707.1| conserved hypothetical protein [Streptococcus pneumoniae 70585]
          Length = 183

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 35  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPVLDTI 92

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 93  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 151

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E   +  K   ++  ++   + L+ +L
Sbjct: 152 DELTMEYMDKTRKKTVQIPYSLVSKARLAVKL 183


>gi|146319504|ref|YP_001199216.1| hypothetical protein SSU05_1850 [Streptococcus suis 05ZYH33]
 gi|259645119|sp|A4VXH7|RIMP_STRSY RecName: Full=Ribosome maturation factor rimP
 gi|145690310|gb|ABP90816.1| unknown protein [Streptococcus suis 05ZYH33]
          Length = 158

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L IFV+++ G ++L+D  +LS+ ISPILD    +     Y LEV+SPG++RP+    
Sbjct: 35  DYVLSIFVDKE-GGISLQDTADLSEKISPILDTIKPDPFPDQYMLEVTSPGLERPLKTAD 93

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
              +  G  +  ++   + DK K+  G ++    T   +E   +  K     ++ I + +
Sbjct: 94  AVEKAVGKYIHVKL-YQAIDKLKVFEGTLLSFDGTDLIMEYMDKTRKK----EVTIPYQT 148

Query: 167 LLSARLIV 174
           +  ARL V
Sbjct: 149 VAKARLAV 156


>gi|291541941|emb|CBL15051.1| Uncharacterized protein conserved in bacteria [Ruminococcus bromii
           L2-63]
          Length = 159

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + QP++E        +  ++E  +  L++++++ +G + + DCE +S+AI+  LD  
Sbjct: 13  VWELCQPIVEGFGLSLWDVRYVKEGADRFLRVYIDKPEG-IDINDCENVSRAINGPLDEL 71

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           + IE  Y LEV SPGI+R ++R   F+++ G
Sbjct: 72  DPIEEAYCLEVCSPGIERELIRDEHFMQFIG 102


>gi|139436992|ref|ZP_01771152.1| Hypothetical protein COLAER_00126 [Collinsella aerofaciens ATCC
           25986]
 gi|133776639|gb|EBA40459.1| Hypothetical protein COLAER_00126 [Collinsella aerofaciens ATCC
           25986]
          Length = 170

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 4/102 (3%)

Query: 49  KNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           K   +++ +E  +G +++L D    ++ +  +++  + I   Y LEVSSPG+ RP+ R S
Sbjct: 41  KAPCVRVRIEGAEGQSLSLNDVTANTKWVGDVIEELDPISSSYTLEVSSPGMARPLRRPS 100

Query: 108 DFLRWNGHVVACEIVLSSGD-KQKLIGKIMGTSETGFFLEKE 148
           DF R+ G    CE+  ++ + ++K  GKI   +ET   LE E
Sbjct: 101 DFARFVGE--NCELTSTATEGRRKYAGKIASATETSVTLELE 140


>gi|15900464|ref|NP_345068.1| hypothetical protein SP_0552 [Streptococcus pneumoniae TIGR4]
 gi|111657274|ref|ZP_01408040.1| hypothetical protein SpneT_02001512 [Streptococcus pneumoniae
           TIGR4]
 gi|149012574|ref|ZP_01833571.1| hypothetical protein CGSSp19BS75_10108 [Streptococcus pneumoniae
           SP19-BS75]
 gi|168488243|ref|ZP_02712442.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|194396782|ref|YP_002037213.1| hypothetical protein SPG_0498 [Streptococcus pneumoniae G54]
 gi|221231385|ref|YP_002510537.1| hypothetical protein SPN23F_04980 [Streptococcus pneumoniae ATCC
           700669]
 gi|307710805|ref|ZP_07647233.1| conserved hypothetical protein [Streptococcus mitis SK321]
 gi|34222993|sp|Q97S61|RIMP_STRPN RecName: Full=Ribosome maturation factor rimP; AltName: Full=SP14.3
 gi|226707643|sp|B5E262|RIMP_STRP4 RecName: Full=Ribosome maturation factor rimP
 gi|254806440|sp|B8ZM89|RIMP_STRPJ RecName: Full=Ribosome maturation factor rimP
 gi|14972026|gb|AAK74708.1| SP14.3 protein [Streptococcus pneumoniae TIGR4]
 gi|147763379|gb|EDK70316.1| hypothetical protein CGSSp19BS75_10108 [Streptococcus pneumoniae
           SP19-BS75]
 gi|183572963|gb|EDT93491.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|194356449|gb|ACF54897.1| hypothetical protein SPG_0498 [Streptococcus pneumoniae G54]
 gi|220673845|emb|CAR68348.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
           700669]
 gi|301793756|emb|CBW36143.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
 gi|307617411|gb|EFN96583.1| conserved hypothetical protein [Streptococcus mitis SK321]
 gi|332074366|gb|EGI84842.1| hypothetical protein SPAR50_0547 [Streptococcus pneumoniae GA17570]
 gi|332204572|gb|EGJ18637.1| hypothetical protein SPAR120_0537 [Streptococcus pneumoniae
           GA47901]
          Length = 159

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K    +QI  S  S   ARL V
Sbjct: 128 DELTMEYMDKTRK--KTVQIPYSLVS--KARLAV 157


>gi|260583737|ref|ZP_05851485.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633]
 gi|260158363|gb|EEW93431.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633]
          Length = 157

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S++  PVIE   F  V +  ++E KN  L+ ++++  G + L DC  +S+  S +LD +
Sbjct: 8   VSTLALPVIEAEGFELVDLEFVKEGKNWFLRFYLDK-PGGIDLDDCAFMSEKFSELLDAQ 66

Query: 84  --NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             + I   Y LEVSSPG +RP+  + D     G  V
Sbjct: 67  DPDPIPQAYFLEVSSPGAERPLKTEKDLKEAIGQYV 102


>gi|331701345|ref|YP_004398304.1| ribosome maturation factor rimP [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128688|gb|AEB73241.1| Ribosome maturation factor rimP [Lactobacillus buchneri NRRL
           B-30929]
          Length = 157

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++P++E+ SF    +  ++E K+  L++++++  G +T+ DC  +S  +S  LD  
Sbjct: 8   VKQVVEPILEKHSFYLFDVEFVKENKSWYLRVYIDKK-GGITIDDCVLVSDELSEKLDAM 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I   Y LEVSSPG +RP+   ++  +  G  +   +  +    +   G +    + 
Sbjct: 67  DPDPIPQAYFLEVSSPGAERPLRNDAELKQAIGEYIHVSLYQNLNGNKTFEGILKSLDDD 126

Query: 142 GFFLEKEKRGEKDMNEL 158
              L+ +K G++D  E+
Sbjct: 127 KLVLQNDKWGKQDTLEV 143


>gi|297588446|ref|ZP_06947089.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
 gi|297573819|gb|EFH92540.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
          Length = 154

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 3/124 (2%)

Query: 29  IQPVIEE--MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           + P+IE+  + F  V+ S    KN+L   ++E+D+G +++ DCE ++  I+  LD  + I
Sbjct: 14  LSPLIEDTGIDFYDVEYSNQNGKNIL-TFYIEKDEGLISIDDCELINNRITDKLDEIDPI 72

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LE++S  I  P  R  DF +  G+VV   +      K++  G +   ++    LE
Sbjct: 73  SDPYYLEIASVDITTPFTRDKDFKKNLGNVVIVNLYQKLDSKKEFKGILKDFNDQEISLE 132

Query: 147 KEKR 150
            EK 
Sbjct: 133 LEKN 136


>gi|315452832|ref|YP_004073102.1| ribosome maturation factor rimP [Helicobacter felis ATCC 49179]
 gi|315131884|emb|CBY82512.1| ribosome maturation factor rimP [Helicobacter felis ATCC 49179]
          Length = 156

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 47/78 (60%)

Query: 45  LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMV 104
           L E +  +L+I ++  +G  +L  C+E S  ISP+LDV   I G Y LEVSS G++R + 
Sbjct: 27  LKENQTDILRISIKALEGPTSLDVCQEASLLISPLLDVHAPIAGSYTLEVSSMGLERTLS 86

Query: 105 RKSDFLRWNGHVVACEIV 122
           ++  F    G ++ C+I+
Sbjct: 87  KRRHFELSIGELIECKIL 104


>gi|322387177|ref|ZP_08060787.1| hypothetical protein HMPREF9423_0185 [Streptococcus infantis ATCC
           700779]
 gi|321141706|gb|EFX37201.1| hypothetical protein HMPREF9423_0185 [Streptococcus infantis ATCC
           700779]
          Length = 183

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 35  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 92

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 93  KPDPFPEQYFLEITSPGLERPLKTKEAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLSFEE 151

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K      + I ++ +  ARL V
Sbjct: 152 DELTMEYMDKTRKK----TVRIPYNLVSKARLAV 181


>gi|309799812|ref|ZP_07694019.1| conserved hypothetical protein [Streptococcus infantis SK1302]
 gi|308116528|gb|EFO53997.1| conserved hypothetical protein [Streptococcus infantis SK1302]
          Length = 159

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKEAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E   +  K   ++  ++   + L+ +L
Sbjct: 128 DELTMEYMDKTRKKTVQIPYSLVSKARLAVKL 159


>gi|256379833|ref|YP_003103493.1| hypothetical protein Amir_5837 [Actinosynnema mirum DSM 43827]
 gi|255924136|gb|ACU39647.1| protein of unknown function DUF150 [Actinosynnema mirum DSM 43827]
          Length = 174

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 13/130 (10%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE----EKNLLLQIFVERDDGNMTLRDCEELSQAI 76
           LA  ++ V++  +E + +    + LL+     +  L+++ V+ D+G + L +  + S+A+
Sbjct: 9   LAAQLTPVVREAVEAIGY---DLELLDVNQAGRRRLVKVVVDGDEG-IGLDEVAQASRAV 64

Query: 77  SPILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           S  LD  E++I G Y LEV+SPG DRP+ R   +LR    +V     +   ++ +  G++
Sbjct: 65  SAALDANEHLIAGPYTLEVTSPGADRPLTRPRHWLRARLRLVK----VKQPEQVEWFGRV 120

Query: 136 MGTSETGFFL 145
               +TG  L
Sbjct: 121 GDCDDTGVVL 130


>gi|294649081|ref|ZP_06726524.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292825027|gb|EFF83787.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 174

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 47/88 (53%)

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  + S    + G  VA  ++ + 
Sbjct: 69  VQDCVLVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLSQMSGYIGQQVALRLIAAV 128

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEK 153
            +++K   K++        ++ E  G +
Sbjct: 129 ENRRKFQAKLLSVDLENEMIQVEVEGAQ 156


>gi|146321699|ref|YP_001201410.1| hypothetical protein SSU98_1852 [Streptococcus suis 98HAH33]
 gi|259586202|sp|A4W3S1|RIMP_STRS2 RecName: Full=Ribosome maturation factor rimP
 gi|145692505|gb|ABP93010.1| unknown protein [Streptococcus suis 98HAH33]
 gi|292559122|gb|ADE32123.1| hypothetical protein SSGZ1_1667 [Streptococcus suis GZ1]
          Length = 158

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L IFV+++ G ++L+D  +LS+ ISPILD    +     Y LEV+SPG++RP+    
Sbjct: 35  DYVLSIFVDKE-GGISLQDTADLSEKISPILDTIKPDPFPDQYMLEVTSPGLERPLKTAD 93

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
              +  G  +  ++   + DK K+  G ++    T   +E   +  K     ++ I + +
Sbjct: 94  AVEKAVGKYIHVKL-YQAIDKIKVFEGTLLSFDGTDLIMEYMDKTRKK----EVTIPYQT 148

Query: 167 LLSARLIV 174
           +  ARL V
Sbjct: 149 VAKARLAV 156


>gi|300813715|ref|ZP_07094035.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512172|gb|EFK39352.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 153

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
                I  + Q   EE+ +  V I   +  K+ LL IF+ + +G + L DC ++S  I  
Sbjct: 5   SFKNQIFKIAQVSAEELGYEIVDIEYQKGNKHDLLSIFIFKKEG-IDLDDCTKMSHNIEK 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD   I+   Y LE+SSPG+DRP+  K D+ R   + V  ++      K++ +G +   
Sbjct: 64  NLDNLEILTRPYYLEISSPGLDRPIKTKDDYRRNLENEVEVKLYGPYNGKKEYVGILKDY 123

Query: 139 SETGFFL 145
           +E    +
Sbjct: 124 NEHNVII 130


>gi|28210958|ref|NP_781902.1| hypothetical protein CTC01272 [Clostridium tetani E88]
 gi|34222839|sp|Q895K1|RIMP_CLOTE RecName: Full=Ribosome maturation factor rimP
 gi|28203397|gb|AAO35839.1| protein associated with NUS operon [Clostridium tetani E88]
          Length = 153

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 53/81 (65%), Gaps = 2/81 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++  + +P++ ++ +    +  + E K   L+I+++ + G + L DCE++S+A+S +LD 
Sbjct: 9   NLKELTEPIVNDLDYELYYLEFVNENKENYLRIYIDSESG-IGLEDCEKVSRAVSAMLDE 67

Query: 83  ENIIEGHYRLEVSSPGIDRPM 103
           ++ I+  Y LEVSSPG++R +
Sbjct: 68  KDPIDTSYYLEVSSPGLERQL 88


>gi|296877070|ref|ZP_06901111.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 15912]
 gi|312867870|ref|ZP_07728075.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
 gi|296431931|gb|EFH17737.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 15912]
 gi|311096625|gb|EFQ54864.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
          Length = 159

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILD-- 81
           ++ VIQP I+E  F  V +   +   + +L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VTEVIQPAIKE-PFELVDVEYGKMGGDYVLSIFVDKPEG-ITLNDTADLTEIISPLLDQI 68

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LEV+SPG++RP+  K       G  V   +   + +KQK+  G ++G  E
Sbjct: 69  KPDPFPEQYFLEVTSPGLERPLKTKEALEGAVGKYVNISL-YKAVEKQKVFEGNLVGFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K      + I ++ +  ARL V
Sbjct: 128 DVLTIEYMDKTRKK----TVDIPYNLVSKARLAV 157


>gi|304414227|ref|ZP_07395595.1| hypothetical protein REG_1311 [Candidatus Regiella insecticola
           LSR1]
 gi|304283441|gb|EFL91837.1| hypothetical protein REG_1311 [Candidatus Regiella insecticola
           LSR1]
          Length = 154

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I   ++ +  + V +  +  +   L+I+++  DG +T+  C ++S  +S +LDVE 
Sbjct: 12  LTEIISAPVKALGHKLVGVEFIPGRQSTLRIYIDNCDG-VTVDMCADVSYQVSAVLDVEE 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            I   Y LEVSSPG++R +    D+  + G  +   + ++  +++K  G I
Sbjct: 71  PITCPYNLEVSSPGLERLLFTAEDYTDYLGERINLTLRIAMQNRRKWQGII 121


>gi|223934078|ref|ZP_03626027.1| protein of unknown function DUF150 [Streptococcus suis 89/1591]
 gi|253752515|ref|YP_003025656.1| hypothetical protein SSUSC84_1671 [Streptococcus suis SC84]
 gi|253754341|ref|YP_003027482.1| hypothetical protein SSU1646 [Streptococcus suis P1/7]
 gi|253756275|ref|YP_003029415.1| hypothetical protein SSUBM407_1719 [Streptococcus suis BM407]
 gi|302024449|ref|ZP_07249660.1| hypothetical protein Ssui0_07814 [Streptococcus suis 05HAS68]
 gi|330833474|ref|YP_004402299.1| hypothetical protein SSUST3_1700 [Streptococcus suis ST3]
 gi|223897248|gb|EEF63660.1| protein of unknown function DUF150 [Streptococcus suis 89/1591]
 gi|251816804|emb|CAZ52447.1| conserved hypothetical protein [Streptococcus suis SC84]
 gi|251818739|emb|CAZ56575.1| conserved hypothetical protein [Streptococcus suis BM407]
 gi|251820587|emb|CAR47343.1| conserved hypothetical protein [Streptococcus suis P1/7]
 gi|319758924|gb|ADV70866.1| hypothetical protein SSUJS14_1808 [Streptococcus suis JS14]
 gi|329307697|gb|AEB82113.1| hypothetical protein SSUST3_1700 [Streptococcus suis ST3]
          Length = 156

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L IFV+++ G ++L+D  +LS+ ISPILD    +     Y LEV+SPG++RP+    
Sbjct: 33  DYVLSIFVDKE-GGISLQDTADLSEKISPILDTIKPDPFPDQYMLEVTSPGLERPLKTAD 91

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
              +  G  +  ++   + DK K+  G ++    T   +E   +  K     ++ I + +
Sbjct: 92  AVEKAVGKYIHVKL-YQAIDKIKVFEGTLLSFDGTDLIMEYMDKTRKK----EVTIPYQT 146

Query: 167 LLSARLIV 174
           +  ARL V
Sbjct: 147 VAKARLAV 154


>gi|46578926|ref|YP_009734.1| hypothetical protein DVU0511 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603473|ref|YP_967873.1| hypothetical protein Dvul_2430 [Desulfovibrio vulgaris DP4]
 gi|51316683|sp|Q72EQ8|RIMP_DESVH RecName: Full=Ribosome maturation factor rimP
 gi|166987475|sp|A1VG80|RIMP_DESVV RecName: Full=Ribosome maturation factor rimP
 gi|46448338|gb|AAS94993.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563702|gb|ABM29446.1| protein of unknown function DUF150 [Desulfovibrio vulgaris DP4]
 gi|311232784|gb|ADP85638.1| protein of unknown function DUF150 [Desulfovibrio vulgaris RCH1]
          Length = 172

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 4/157 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
            L   I+ +  P +  +      I L      ++++FV+  +G +T+  C E+S+ +   
Sbjct: 5   ALDATIADMAGPFLASLGLELWGIELSYGGRTVVRLFVDGPEG-VTIDQCAEVSRHVGLA 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIGKIM 136
           L+VE++I   Y LEVSSPG++RP  R      + G  +   ++  + +   ++K  G+++
Sbjct: 64  LEVEDVISSAYVLEVSSPGLERPFFRAEQMSPYVGRQIELTLIDPTPEWPGRRKFRGELL 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                   L  E     +  E  +  S+  +  A LI
Sbjct: 124 AVEGDTVVLRPEGAPAPEAEEAVLRTSWQGVRKANLI 160


>gi|148651971|ref|YP_001279064.1| hypothetical protein PsycPRwf_0155 [Psychrobacter sp. PRwf-1]
 gi|172048444|sp|A5WBS3|RIMP_PSYWF RecName: Full=Ribosome maturation factor rimP
 gi|148571055|gb|ABQ93114.1| protein of unknown function DUF150 [Psychrobacter sp. PRwf-1]
          Length = 166

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 52  LLQIFVER------DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVR 105
           LL+I++E        D  +T+ +C  ++  +S +L+V + I G Y LEVSSPG+DRP   
Sbjct: 38  LLRIYIEALPEDKAADKQVTIENCAAVTHQVSGVLEVHDPIAGEYVLEVSSPGLDRPFFA 97

Query: 106 KSDFLRWNGHVVACEIVLSSGD----KQKLIGKI 135
                 + G  +   ++ + G     ++K+ GK+
Sbjct: 98  PEQMTDYMGQTINLRLIQAVGSGSSKRRKVTGKL 131


>gi|229552420|ref|ZP_04441145.1| protein of hypothetical function DUF150 [Lactobacillus rhamnosus
           LMS2-1]
 gi|229314157|gb|EEN80130.1| protein of hypothetical function DUF150 [Lactobacillus rhamnosus
           LMS2-1]
          Length = 167

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++++++P++++  F    +  ++E     L++++++  G +TL +C  +S+A+S  LD  
Sbjct: 18  VTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDKP-GGITLDECVLVSEALSEQLDAI 76

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDF 109
           N   I   Y LEVSSPG +RP+ R++D+
Sbjct: 77  NPDPIPQQYFLEVSSPGAERPLKRETDY 104


>gi|297170975|gb|ADI21990.1| uncharacterized protein conserved in bacteria [uncultured
           myxobacterium HF0200_01L06]
          Length = 170

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 9/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD-CEELSQAISPILDV 82
           ++ ++I+PV+E+     V   +L    ++  I     +G     D C E+S+ +   LD 
Sbjct: 8   ELRTLIEPVLEDHGCELVDTIVLNRPKVVRIIIDRASEGRGVGIDLCAEISREVGTQLDA 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              IEG YRLEVSSPG+ R + R+ DF    G  V          +++  G+++   E G
Sbjct: 68  AEAIEGSYRLEVSSPGLHRVLSREKDFRAACGQNVNVTTKGLIDGRRRFNGQLL---EFG 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             L +      +++ +++ I FD +  A L+
Sbjct: 125 DGLAR-----VEVDGVRVGIPFDQIEKANLV 150


>gi|209527730|ref|ZP_03276226.1| protein of unknown function DUF150 [Arthrospira maxima CS-328]
 gi|209491851|gb|EDZ92210.1| protein of unknown function DUF150 [Arthrospira maxima CS-328]
          Length = 153

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 53/103 (51%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           +K  +L++ +   + + +L DCE +S+A+   LD  ++I   Y LEVSSPG+ R +    
Sbjct: 33  QKPPVLRVDIRNLEQDTSLEDCERMSRALEEQLDAVDVIPDAYILEVSSPGVSRSLSCDR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
           DF+ + G  V           ++  GK++G  E    + ++ R
Sbjct: 93  DFISFKGFPVTVTTSEPYKGHKQQSGKLVGRDEMAVHINQKGR 135


>gi|226951827|ref|ZP_03822291.1| YhbC family protein [Acinetobacter sp. ATCC 27244]
 gi|226837367|gb|EEH69750.1| YhbC family protein [Acinetobacter sp. ATCC 27244]
          Length = 174

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 47/88 (53%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  + S    + G  VA  ++ 
Sbjct: 67  IGVQDCVLVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLSQMSGYIGQQVALRLIA 126

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           +  +++K   K++        ++ E  G
Sbjct: 127 AVENRRKFQAKLLSVDLENEMIQVEVEG 154


>gi|71908072|ref|YP_285659.1| hypothetical protein Daro_2454 [Dechloromonas aromatica RCB]
 gi|91208406|sp|Q47D92|RIMP_DECAR RecName: Full=Ribosome maturation factor rimP
 gi|71847693|gb|AAZ47189.1| Protein of unknown function DUF150 [Dechloromonas aromatica RCB]
          Length = 146

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 82/152 (53%), Gaps = 13/152 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER--DDGNMTLRDCEELSQAISPILD 81
           D++++++  +  + +  V + +   +   +++F++    +  + + DC ++S  ++ + +
Sbjct: 2   DLNTLLETTVVGLGYELVDVEM-SPRGRTIRVFIDAPAKETGIDVEDCAKVSNQLTRVFE 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VEN      RLE+SSPG+DR + + +DF R++G  +  ++ +  G ++   G+++G  + 
Sbjct: 61  VENF--DFDRLEISSPGLDRVVKKAADFERFSGQEIQIKVRIPQGGRRNFQGELLGLKDG 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              L    R  KD  EL+    F ++  ARL+
Sbjct: 119 KVGL----RLAKDDVELE----FTNIEKARLV 142


>gi|322391411|ref|ZP_08064881.1| essential protein [Streptococcus peroris ATCC 700780]
 gi|321145837|gb|EFX41228.1| essential protein [Streptococcus peroris ATCC 700780]
          Length = 207

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 59  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 116

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 117 KPDPFPEQYFLEITSPGLERPLKTKEAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLSFEE 175

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K      + I ++ +  ARL V
Sbjct: 176 DELTMEYMDKTRKK----TVQIPYNLVSKARLAV 205


>gi|293610133|ref|ZP_06692434.1| hypothetical protein HMPREF0013_02285 [Acinetobacter sp. SH024]
 gi|292827365|gb|EFF85729.1| hypothetical protein HMPREF0013_02285 [Acinetobacter sp. SH024]
 gi|325124306|gb|ADY83829.1| hypothetical protein BDGL_003243 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 174

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 18/132 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-----------DDGNMTL------ 66
           +  +I P +E        I  L + K  LL+I++++           +DG + L      
Sbjct: 10  LHDLIVPAVEACGVDLWGIEFLPQGKRSLLRIYIDKAVSEDAEPVINEDGEVELGRGIGV 69

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  +A  ++ +  
Sbjct: 70  QDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQGYIGQQIALRLIAAVE 129

Query: 127 DKQKLIGKIMGT 138
           +++K   K++  
Sbjct: 130 NRRKFQAKLIAV 141


>gi|262374025|ref|ZP_06067302.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262311036|gb|EEY92123.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 174

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 48/89 (53%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  + +    + G  VA  ++ 
Sbjct: 67  IGVQDCVLVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLNQLPAYIGQQVALRLIA 126

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGE 152
           +  +++K   K++        ++ E  G+
Sbjct: 127 AVENRRKFQAKLLSVDLENELIQVEVEGK 155


>gi|315924375|ref|ZP_07920597.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622254|gb|EFV02213.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 162

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 8/124 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K  +L ++++R +G ++L DCE++S+ IS  LD  + I   Y L+VSSPG++R + R   
Sbjct: 43  KKRILTVYIDRKEG-ISLEDCEKVSREISAFLDAADPIAETYTLQVSSPGLERKLTRLKH 101

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           +    G ++  ++   + D QK +  ++       F++ EK   ++ +   + I F S+ 
Sbjct: 102 YRAVVGEMIDLKL-FEAIDGQKQLCAVLR------FVDDEKIVVQEGDAEPLTIPFKSIA 154

Query: 169 SARL 172
            A L
Sbjct: 155 KASL 158


>gi|212639525|ref|YP_002316045.1| hypothetical protein Aflv_1699 [Anoxybacillus flavithermus WK1]
 gi|212561005|gb|ACJ34060.1| Uncharacterized conserved protein, YhbC family [Anoxybacillus
           flavithermus WK1]
          Length = 200

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++  M    V I  ++E KN  L++F++   G + +  C  +S+ +S  LD  
Sbjct: 52  VEELVTPIVTHMGLELVDIEYVKEGKNWFLRVFIDSPTG-IDIDQCGVVSEQLSEKLDEI 110

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + I  +Y LEVSSPG +RP+ +  DF R  G  V
Sbjct: 111 DPIPHNYFLEVSSPGAERPLKKARDFERAVGKNV 144


>gi|251797401|ref|YP_003012132.1| hypothetical protein Pjdr2_3411 [Paenibacillus sp. JDR-2]
 gi|247545027|gb|ACT02046.1| protein of unknown function DUF150 [Paenibacillus sp. JDR-2]
          Length = 153

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P ++   F  V I  ++E  N  L++FV+++ G + + +C ++S+ +S  LD  
Sbjct: 10  VEAMVTPFLDSNGFELVDIEYVKEGSNYFLRVFVDKE-GGIDIDECGKVSEFLSEELDKN 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG-HV 116
           + +   Y LEVSSPG +RP+ +  D  +  G HV
Sbjct: 69  DPVSDAYFLEVSSPGAERPLKKPDDVRKAVGKHV 102


>gi|15902521|ref|NP_358071.1| hypothetical protein spr0477 [Streptococcus pneumoniae R6]
 gi|116516675|ref|YP_815984.1| hypothetical protein SPD_0478 [Streptococcus pneumoniae D39]
 gi|149002223|ref|ZP_01827165.1| hypothetical protein CGSSp14BS69_01239 [Streptococcus pneumoniae
           SP14-BS69]
 gi|149005662|ref|ZP_01829401.1| hypothetical protein CGSSp18BS74_08855 [Streptococcus pneumoniae
           SP18-BS74]
 gi|149021507|ref|ZP_01835562.1| hypothetical protein CGSSp23BS72_06564 [Streptococcus pneumoniae
           SP23-BS72]
 gi|169833553|ref|YP_001694039.1| hypothetical protein SPH_0649 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|307126755|ref|YP_003878786.1| hypothetical protein SP670_0615 [Streptococcus pneumoniae 670-6B]
 gi|34222871|sp|Q8DQV6|RIMP_STRR6 RecName: Full=Ribosome maturation factor rimP
 gi|122279130|sp|Q04LW4|RIMP_STRP2 RecName: Full=Ribosome maturation factor rimP
 gi|226707991|sp|B1IA76|RIMP_STRPI RecName: Full=Ribosome maturation factor rimP
 gi|15458047|gb|AAK99281.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077251|gb|ABJ54971.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
 gi|147759538|gb|EDK66529.1| hypothetical protein CGSSp14BS69_01239 [Streptococcus pneumoniae
           SP14-BS69]
 gi|147762602|gb|EDK69562.1| hypothetical protein CGSSp18BS74_08855 [Streptococcus pneumoniae
           SP18-BS74]
 gi|147930203|gb|EDK81188.1| hypothetical protein CGSSp23BS72_06564 [Streptococcus pneumoniae
           SP23-BS72]
 gi|168996055|gb|ACA36667.1| conserved hypothetical protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|306483817|gb|ADM90686.1| conserved hypothetical protein [Streptococcus pneumoniae 670-6B]
 gi|332076984|gb|EGI87446.1| hypothetical protein SPAR148_0517 [Streptococcus pneumoniae
           GA17545]
          Length = 159

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K      + I +  +  ARL V
Sbjct: 128 DELTMEYMDKTRKK----TVRIPYSLVSKARLAV 157


>gi|259585704|sp|B7GG79|RIMP_ANOFW RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++  M    V I  ++E KN  L++F++   G + +  C  +S+ +S  LD  
Sbjct: 8   VEELVTPIVTHMGLELVDIEYVKEGKNWFLRVFIDSPTG-IDIDQCGVVSEQLSEKLDEI 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           + I  +Y LEVSSPG +RP+ +  DF R  G
Sbjct: 67  DPIPHNYFLEVSSPGAERPLKKARDFERAVG 97


>gi|289167248|ref|YP_003445515.1| hypothetical protein smi_0375 [Streptococcus mitis B6]
 gi|288906813|emb|CBJ21647.1| conserved hypothetical protein [Streptococcus mitis B6]
          Length = 159

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VREVVEPVIQS-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEVISPVLDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E   +  K   ++  ++   + L+ +L
Sbjct: 128 DELTMEYMDKTRKKTVQIPYSLVSKARLAVKL 159


>gi|259585824|sp|A8ZZ67|RIMP_DESOH RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           D  +TL DC  +S+ ++ +LDV      +Y LEVSS G++RP+ ++ DF R+ G  V   
Sbjct: 50  DRGVTLEDCAGISRQVNGLLDVYLPELDNYTLEVSSAGLERPLAKEIDFERFAGSRVKIR 109

Query: 121 IVLSSGDKQKLIGKIMGTSE 140
                 D++   G ++G S+
Sbjct: 110 TAAPVSDRKNFTGILLGVSD 129


>gi|199597101|ref|ZP_03210533.1| hypothetical protein LRH_07196 [Lactobacillus rhamnosus HN001]
 gi|258508611|ref|YP_003171362.1| hypothetical protein LGG_01616 [Lactobacillus rhamnosus GG]
 gi|258539790|ref|YP_003174289.1| hypothetical protein LC705_01599 [Lactobacillus rhamnosus Lc 705]
 gi|199591905|gb|EDY99979.1| hypothetical protein LRH_07196 [Lactobacillus rhamnosus HN001]
 gi|257148538|emb|CAR87511.1| Conserved hypotehtical protein [Lactobacillus rhamnosus GG]
 gi|257151466|emb|CAR90438.1| Conserved hypotehtical protein [Lactobacillus rhamnosus Lc 705]
 gi|259649918|dbj|BAI42080.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 159

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 56/88 (63%), Gaps = 4/88 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++++++P++++  F    +  ++E     L++++++  G +TL +C  +S+A+S  LD  
Sbjct: 10  VTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDKP-GGITLDECVLVSEALSEQLDAI 68

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDF 109
           N   I   Y LEVSSPG +RP+ R++D+
Sbjct: 69  NPDPIPQQYFLEVSSPGAERPLKRETDY 96


>gi|293374144|ref|ZP_06620478.1| SP14.3 protein [Turicibacter sanguinis PC909]
 gi|325837436|ref|ZP_08166418.1| hypothetical protein HMPREF9402_1291 [Turicibacter sp. HGF1]
 gi|292647247|gb|EFF65223.1| SP14.3 protein [Turicibacter sanguinis PC909]
 gi|325490968|gb|EGC93266.1| hypothetical protein HMPREF9402_1291 [Turicibacter sp. HGF1]
          Length = 155

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 6/156 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +      +++P+ E  +   V +  ++E +N  L+++V+  +G + +  C ++++A+S 
Sbjct: 3   NIVAKTEELVKPICEANNVELVDVEYVKEGQNFFLRVYVDTPEG-IDIDQCADVAEALSE 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + IE  Y LEVSSPG +RP+  K       G  +  +   +   +++  G ++  
Sbjct: 62  KLDQHDYIEDEYMLEVSSPGAERPLKTKEAVAESIGAYINVKTYKAIDGQKEFEGHLIKF 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            E    LE   +  K +    + I +D     RL +
Sbjct: 122 EEDILTLEVLVKTRKKV----VEIPYDKAAKVRLAI 153


>gi|291532988|emb|CBL06101.1| Uncharacterized protein conserved in bacteria [Megamonas
           hypermegale ART12/1]
          Length = 112

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 54/91 (59%), Gaps = 5/91 (5%)

Query: 21  LAGDISSVIQPVIEEM----SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
           +A  +   ++ + EE+     +  V +  ++E++  L+++++++ G + L DC+E+S  +
Sbjct: 1   MANRVEEAVEKIAEEILANTDYELVDVEYVKERDWFLRVYIDKE-GGIGLDDCQEVSGLL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
              L+  NII   Y LEVSSPG+DR + ++ 
Sbjct: 60  DEKLEELNIINDRYILEVSSPGLDRALKKEK 90


>gi|109947687|ref|YP_664915.1| hypothetical protein Hac_1157 [Helicobacter acinonychis str.
           Sheeba]
 gi|122973267|sp|Q17WR0|RIMP_HELAH RecName: Full=Ribosome maturation factor rimP
 gi|109714908|emb|CAJ99916.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 146

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 29  IQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           I+ VIE + +    +SL++E +  +L++ ++  +G ++L +C+++S+ ISP+LDV + ++
Sbjct: 9   IEGVIESLGYLLYDVSLIKESEQHILRVSLKNPNGAVSLDNCQQVSEIISPLLDVCDFLK 68

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
             Y LEVSS G++R +     F    G  VA +++
Sbjct: 69  DAYILEVSSMGLERTLKTPKHFKLSLGEKVAVKLM 103


>gi|291296310|ref|YP_003507708.1| hypothetical protein Mrub_1931 [Meiothermus ruber DSM 1279]
 gi|290471269|gb|ADD28688.1| protein of unknown function DUF150 [Meiothermus ruber DSM 1279]
          Length = 159

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 15/151 (9%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER- 59
           ME  H L +          G A   S V + V+  + +  ++  L   KN +L + +ER 
Sbjct: 1   MEPEHPLQA----------GGAPQWSQVAESVLAPLGYEVLEAGLKSGKNPVLLVRIERK 50

Query: 60  DDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
           D+  +++ D E  ++A+S  LD +E ++   Y L+V SPG DRP+     F R+ G  + 
Sbjct: 51  DEVPISIADLERANRALSAHLDTLEALLPARYLLQVESPGADRPLFTARHFERFAG--LK 108

Query: 119 CEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
             +    G+    IG + G     F LEK++
Sbjct: 109 VRVRSPQGNFTGRIGAVRGDM-VEFLLEKDE 138


>gi|229820978|ref|YP_002882504.1| protein of unknown function DUF150 [Beutenbergia cavernae DSM
           12333]
 gi|259585729|sp|C5BWS6|RIMP_BEUC1 RecName: Full=Ribosome maturation factor rimP
 gi|229566891|gb|ACQ80742.1| protein of unknown function DUF150 [Beutenbergia cavernae DSM
           12333]
          Length = 162

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 9/136 (6%)

Query: 18  DMGLAGDISSVIQPVIEE--MSFRSVQISLLEEKNLLLQIFVERDDGNMTL--RDCEELS 73
           D  L G +  +++PV     +    V +S    +  + ++ ++  DG   L   D  + S
Sbjct: 6   DTALLGRLRDLLEPVAAGCGLHLEDVAVSPAGRRRRV-RVTLDLADGPGALGSNDLADAS 64

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+S  LD  +++ G Y LEVS+PG DRP+ +   F R  G +V   + L++G    + G
Sbjct: 65  RAVSAALDDADVVTGPYVLEVSTPGTDRPLTQPRHFRRAQGRLV--TLTLAAG--THVSG 120

Query: 134 KIMGTSETGFFLEKEK 149
           +++   + G  +  + 
Sbjct: 121 RLLSADDDGIHVRTDA 136


>gi|158523047|ref|YP_001530917.1| hypothetical protein Dole_3037 [Desulfococcus oleovorans Hxd3]
 gi|158511873|gb|ABW68840.1| protein of unknown function DUF150 [Desulfococcus oleovorans Hxd3]
          Length = 181

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 4/132 (3%)

Query: 13  PRIFGDMG-LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER--DDGNMTLRD 68
           PR+ G    +   +  +++PV        V +   +E +  +L++++     D  +TL D
Sbjct: 18  PRLMGGGNPVVAQMWKLVEPVCSAEGMELVFVEFNKESQGRVLRLYLASGVPDRGVTLED 77

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           C  +S+ ++ +LDV      +Y LEVSS G++RP+ ++ DF R+ G  V         D+
Sbjct: 78  CAGISRQVNGLLDVYLPELDNYTLEVSSAGLERPLAKEIDFERFAGSRVKIRTAAPVSDR 137

Query: 129 QKLIGKIMGTSE 140
           +   G ++G S+
Sbjct: 138 KNFTGILLGVSD 149


>gi|312194981|ref|YP_004015042.1| hypothetical protein FraEuI1c_1099 [Frankia sp. EuI1c]
 gi|311226317|gb|ADP79172.1| protein of unknown function DUF150 [Frankia sp. EuI1c]
          Length = 277

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           +L++ V+RDDG + L    + S+ IS +LD   E  + G Y LEV+SPG+DRP+     +
Sbjct: 52  VLRVAVDRDDG-IDLDAVADASRLISDLLDQVDEGGLAGAYVLEVTSPGVDRPLTEPRHW 110

Query: 110 LRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
            R  G +V    V    D   ++G+++G  + G  L
Sbjct: 111 RRARGRLVEARRV----DGTVVLGRVLGADDEGVDL 142


>gi|307707651|ref|ZP_07644132.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|322377699|ref|ZP_08052189.1| SP14.3 protein [Streptococcus sp. M334]
 gi|307616364|gb|EFN95556.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|321281464|gb|EFX58474.1| SP14.3 protein [Streptococcus sp. M334]
          Length = 159

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VREVVEPVIQ-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E   +  K   ++  ++   + L+ +L
Sbjct: 128 DELTMEYMDKTRKKTVQIPYSLVSKARLAVKL 159


>gi|126640414|ref|YP_001083398.1| hypothetical protein A1S_0334 [Acinetobacter baumannii ATCC 17978]
          Length = 157

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 17/112 (15%)

Query: 45  LLEEKNLLLQIFVER-----------DDG------NMTLRDCEELSQAISPILDVENIIE 87
           L + K  LL+I+++R           +DG       + + DC  ++Q +  +LDV + I 
Sbjct: 14  LPQGKRSLLRIYIDRPVDENAEPVINEDGEVEQGRGIGVEDCVRVTQQVGAMLDVHDPIS 73

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           G Y LEVSSPG DRP  +      + G  VA  ++ +  +++K   K++   
Sbjct: 74  GEYALEVSSPGWDRPFFQLEQLQGYIGQQVALRLIAAVENRRKFQAKLLAVD 125


>gi|297623579|ref|YP_003705013.1| hypothetical protein Trad_1348 [Truepera radiovictrix DSM 17093]
 gi|297164759|gb|ADI14470.1| protein of unknown function DUF150 [Truepera radiovictrix DSM
           17093]
          Length = 146

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           ++N+LL+I   RD G +T+ D E  +Q  S  LD  +  EG YRLEV SPG +RP+    
Sbjct: 29  KRNVLLRI-DRRDRGVVTMEDVERATQVFSLELDRLDPFEGAYRLEVESPGPERPLRTAE 87

Query: 108 DFLRWNG 114
            F R++G
Sbjct: 88  HFRRFSG 94


>gi|330466359|ref|YP_004404102.1| hypothetical protein VAB18032_11940 [Verrucosispora maris
           AB-18-032]
 gi|328809330|gb|AEB43502.1| hypothetical protein VAB18032_11940 [Verrucosispora maris
           AB-18-032]
          Length = 175

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 23/158 (14%)

Query: 29  IQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE---- 83
           I PV++   +    +S+    +  ++++ V+ D G + L    ++S+A+S  LD      
Sbjct: 2   IAPVVDSAGYDLEDLSVSRAGRRHVVRVIVDAD-GGINLDAVADVSRAVSAALDAAEESG 60

Query: 84  -NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI-------VLSSGDKQKLIGKI 135
            +I+ G Y+LEVSSPG+DRP+     + R  G +V   +          +GD+Q + G++
Sbjct: 61  GDIVAGEYQLEVSSPGVDRPLTLPRHWRRNVGRLVRVTVRGAGESGARPAGDRQ-VTGRV 119

Query: 136 MGTSETGFFLEKEKRGEK------DMNELQIAISFDSL 167
           +   +    LE +  GE+      D+   ++ + F  L
Sbjct: 120 VAADDESVALEVD--GERVQWPYADLGPGRVQVEFSRL 155


>gi|320108354|ref|YP_004183944.1| hypothetical protein AciPR4_3194 [Terriglobus saanensis SP1PR4]
 gi|319926875|gb|ADV83950.1| protein of unknown function DUF150 [Terriglobus saanensis SP1PR4]
          Length = 195

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 3/98 (3%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG--HYRLEVSSPGIDRPMV 104
           E K L   + VE   G +T +DC   +     +LDVE ++ G   Y LEVSSPGI+R + 
Sbjct: 59  ESKALPRGVPVEALSG-VTHQDCAAFATDFGTLLDVEELVPGTTEYTLEVSSPGIERKLF 117

Query: 105 RKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + +D+ R+ G +V  +   +    +   G++  T  T 
Sbjct: 118 KTADYERFAGSLVTLKTFQAINGTKNFTGRMTFTDGTA 155


>gi|293400741|ref|ZP_06644886.1| putative SP14.3 protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305767|gb|EFE47011.1| putative SP14.3 protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 155

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  +I+P++ +       +S  +E KN +LQ+ + R DG+M +  C  +S+ IS  LD  
Sbjct: 7   IKELIKPLLAQEDIELYDVSWQQEGKNRILQVAIMRKDGSMDIDTCAAMSEKISEKLDEV 66

Query: 84  NIIEGHYRLEVSSPGIDRPM 103
           ++I   Y LEV SPG +R +
Sbjct: 67  DMIASEYFLEVCSPGAEREL 86


>gi|227529105|ref|ZP_03959154.1| protein of hypothetical function DUF150 [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350949|gb|EEJ41240.1| protein of hypothetical function DUF150 [Lactobacillus vaginalis
           ATCC 49540]
          Length = 165

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 4/90 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-- 81
           +S + +P++ +       +  ++E K+  L+++V++D G +TL DC ++S  +S  LD  
Sbjct: 13  VSGLAKPILAKHDCYLYDLEFVKEGKSWYLRVYVDKD-GGVTLEDCADISDELSEALDNT 71

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
             + I   Y LEVSSPG +RP+ +++D+ R
Sbjct: 72  EPDPIPQAYFLEVSSPGAERPLKKEADYER 101


>gi|86605174|ref|YP_473937.1| hypothetical protein CYA_0456 [Synechococcus sp. JA-3-3Ab]
 gi|123507667|sp|Q2JX22|RIMP_SYNJA RecName: Full=Ribosome maturation factor rimP
 gi|86553716|gb|ABC98674.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 157

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE +SQA+   LD  ++I GHY LEVSSPGI   ++   DF+ + G   A E+ +    
Sbjct: 55  DCEAMSQALEVELDRVDLIPGHYVLEVSSPGISNLLISDRDFVVFKG--FAVEVTVDPPY 112

Query: 128 KQKLI--GKIMGTSETGFFLEKEKR 150
           K K +  G ++G  E    L  + R
Sbjct: 113 KGKAVWSGHLLGRDEEKVALSLKGR 137


>gi|319944111|ref|ZP_08018389.1| hypothetical protein HMPREF0551_1236 [Lautropia mirabilis ATCC
           51599]
 gi|319742605|gb|EFV95014.1| hypothetical protein HMPREF0551_1236 [Lautropia mirabilis ATCC
           51599]
          Length = 208

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 6/111 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD--GNMTLRDCEELSQAISPILDVENI 85
           ++ PV+  M +  V +  +     LL+I +E  D    +TL DCE +S+ +S +  VE++
Sbjct: 1   MVDPVVSGMGYEVVDVEFV--AGGLLRITIENVDHAQPITLDDCERVSEQLSHLFLVEDV 58

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              + RLE+SSPG+DR + R  DF R+ G  V   + +    ++   G ++
Sbjct: 59  --DYDRLEISSPGLDRRLRRPQDFARFTGDEVKLWLRMPQDGRRTFEGVLL 107


>gi|317010677|gb|ADU84424.1| Ribosome maturation factor rimP [Helicobacter pylori SouthAfrica7]
          Length = 146

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   I+ VIE + +    +SL++E ++ +L++ ++  +G ++L +C+++S+ ISP+LDV 
Sbjct: 5   IEERIEGVIESLGYLLYDVSLIKENEHNILRVSLKNPNGAVSLDNCQQVSEVISPLLDVC 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           + ++  Y LEVSS G++R +     F    G  V  ++V
Sbjct: 65  DFLKDAYILEVSSMGLERVLKTPKHFKLSLGEKVGVKLV 103


>gi|256847047|ref|ZP_05552493.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715711|gb|EEU30686.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 159

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++QP++++  F       ++E  +  L++++++  G +TL DC  +S  +S  LD  
Sbjct: 10  VNELVQPILDQYDFYLFDTEFVKEGHSWYLRVYIDKT-GGITLEDCVNVSDQLSEALDNC 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             + I   Y LEVSSPG +RP+ ++ D+ R  G  +
Sbjct: 69  DPDPIPQAYFLEVSSPGAERPLKKEEDYHRAIGEYI 104


>gi|221195857|ref|ZP_03568910.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
 gi|221184331|gb|EEE16725.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
          Length = 164

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 57  VERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV 116
            + D   ++L +    +  IS  LD  ++  G + LEVSSPG+DRP+ R  DF R++G  
Sbjct: 46  ADEDGKTISLDEVAAETGWISDALDEIDVFPGSFTLEVSSPGMDRPLRRVRDFERFSGSQ 105

Query: 117 VACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
           V+ +     G +++  GK++G  E    LE +
Sbjct: 106 VSLQTTALEG-RRRYTGKLLGIQENIVSLESD 136


>gi|108804246|ref|YP_644183.1| hypothetical protein Rxyl_1409 [Rubrobacter xylanophilus DSM 9941]
 gi|122381798|sp|Q1AW57|RIMP_RUBXD RecName: Full=Ribosome maturation factor rimP
 gi|108765489|gb|ABG04371.1| protein of unknown function DUF150 [Rubrobacter xylanophilus DSM
           9941]
          Length = 152

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           +  LL + V+R+ G +    C  +   ++P L+ E        +EVSSPGI+RP+ R S 
Sbjct: 32  RGPLLTLLVDREGGPVDHEFCARIISIVAPALEEEGY---SGMIEVSSPGIERPLTRPSH 88

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           F R+ G  V   +      ++   G I   ++ GF L   + GE      ++ + F S+ 
Sbjct: 89  FRRFIGRRVRVRVGEPVDGRRNFTGVIERVADAGFVLRLSEDGE------EVELPFGSVT 142

Query: 169 SARL 172
            A L
Sbjct: 143 RAHL 146


>gi|217031630|ref|ZP_03437135.1| hypothetical protein HPB128_21g188 [Helicobacter pylori B128]
 gi|298736659|ref|YP_003729185.1| hypothetical protein HPB8_1164 [Helicobacter pylori B8]
 gi|216946830|gb|EEC25426.1| hypothetical protein HPB128_21g188 [Helicobacter pylori B128]
 gi|298355849|emb|CBI66721.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 146

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+LDV 
Sbjct: 5   IEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPLLDVC 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I+  Y LEVSS G++R +     F
Sbjct: 65  DFIQDAYTLEVSSMGLERTLKTPKHF 90


>gi|307637097|gb|ADN79547.1| transcription termination protein [Helicobacter pylori 908]
 gi|325995688|gb|ADZ51093.1| ribosome maturation factor [Helicobacter pylori 2018]
 gi|325997284|gb|ADZ49492.1| hypothetical protein hp2017_0406 [Helicobacter pylori 2017]
          Length = 146

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+LDV 
Sbjct: 5   IEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPLLDVC 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I+  Y LEVSS G++R +     F
Sbjct: 65  DFIQDAYTLEVSSMGLERTLKTPKHF 90


>gi|304384866|ref|ZP_07367212.1| protein of hypothetical function DUF150 [Pediococcus acidilactici
           DSM 20284]
 gi|304329060|gb|EFL96280.1| protein of hypothetical function DUF150 [Pediococcus acidilactici
           DSM 20284]
          Length = 168

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 81/157 (51%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ + +PVIE   F+ V++  ++E +   L+ ++++  G + + +C  +S  +S +LD +
Sbjct: 19  ITELARPVIESHDFQLVEVEFVKEGQGWFLRFYIDKV-GGINIEECAMVSDELSELLDQQ 77

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +   I   Y LEVSSPG +RP+  K D     G  +   +  +S +KQK+    + + E 
Sbjct: 78  DPDPIPQAYFLEVSSPGAERPLKTKEDLAAAVGEYIHISL-YASINKQKVFEGYLKSFEN 136

Query: 142 GF----FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +L+K +  E       + ++++ +  ARL +
Sbjct: 137 DELVLDYLDKTRHKE-------LKVAYNQVAFARLAI 166


>gi|282882028|ref|ZP_06290669.1| conserved hypothetical protein [Peptoniphilus lacrimalis 315-B]
 gi|281298058|gb|EFA90513.1| conserved hypothetical protein [Peptoniphilus lacrimalis 315-B]
          Length = 153

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 2/127 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
                I  + Q   EE+ +  V I   +  K+ LL IF+ + +G + L DC  +S  I  
Sbjct: 5   SFKNQIFKIAQVSAEELGYEIVDIEYQKGNKHDLLSIFIFKKEG-IDLDDCTMMSHNIEK 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD   I+   Y LE+SSPG+DRP+  K D+ R   + V  ++      K++ +G +   
Sbjct: 64  NLDNLEILSRPYYLEISSPGLDRPIKTKDDYRRNLENEVEVKLYGPYNGKKEYVGILKDY 123

Query: 139 SETGFFL 145
           +E    +
Sbjct: 124 NEHNVII 130


>gi|56752081|ref|YP_172782.1| hypothetical protein syc2072_d [Synechococcus elongatus PCC 6301]
 gi|81300832|ref|YP_401040.1| hypothetical protein Synpcc7942_2023 [Synechococcus elongatus PCC
           7942]
 gi|81561540|sp|Q5N0A8|RIMP_SYNP6 RecName: Full=Ribosome maturation factor rimP
 gi|123556488|sp|Q31LL6|RIMP_SYNE7 RecName: Full=Ribosome maturation factor rimP
 gi|56687040|dbj|BAD80262.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169713|gb|ABB58053.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 153

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  + +P+ +++    VQ      +   +L++ +    G+  L DCE +S++    LD  
Sbjct: 9   ILDLARPIADDLDLEVVQAVFHTNQSPPILRLDIRSRVGDTGLEDCERMSRSFELALDEA 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NII   Y LE+SSPG+   +    DFL + G  V       + D  +  G ++G      
Sbjct: 69  NIIPDAYVLEISSPGLSDTLESDRDFLSFKGFPVQVTSRSPNDDTVEQQGTLLGRDADSV 128

Query: 144 FLEKEKR 150
           +L K  R
Sbjct: 129 YLNKRGR 135


>gi|167772659|ref|ZP_02444712.1| hypothetical protein ANACOL_04040 [Anaerotruncus colihominis DSM
           17241]
 gi|167665137|gb|EDS09267.1| hypothetical protein ANACOL_04040 [Anaerotruncus colihominis DSM
           17241]
          Length = 159

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 2/115 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A    ++  PV + M      ++  +E     L+ +++R+ G +T+ +CE  S+ +S +L
Sbjct: 12  AAVCEALAAPVAQRMGLYLWDVAFEKEGAGWYLRYYIDRE-GGVTIDECEAFSREVSDLL 70

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D  + I+  Y LEV SPG++R + +   F ++ G  V   ++     ++  +G +
Sbjct: 71  DEADPIDQSYTLEVGSPGVERKLTKDWHFQKYIGAQVHVRLIRPVEGERDFVGAL 125


>gi|308182570|ref|YP_003926697.1| Ribosome maturation factor rimP [Helicobacter pylori PeCan4]
 gi|308064755|gb|ADO06647.1| Ribosome maturation factor rimP [Helicobacter pylori PeCan4]
          Length = 146

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIESVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|299771784|ref|YP_003733810.1| hypothetical protein AOLE_17760 [Acinetobacter sp. DR1]
 gi|298701872|gb|ADI92437.1| hypothetical protein AOLE_17760 [Acinetobacter sp. DR1]
          Length = 175

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 42/75 (56%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  +A  ++ 
Sbjct: 68  IGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQGYIGQQIALRLIA 127

Query: 124 SSGDKQKLIGKIMGT 138
           +  +++K   K++  
Sbjct: 128 AVENRRKFQAKLIAV 142


>gi|262280757|ref|ZP_06058540.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257657|gb|EEY76392.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 174

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 42/75 (56%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  +A  ++ 
Sbjct: 67  IGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQGYIGQQIALRLIA 126

Query: 124 SSGDKQKLIGKIMGT 138
           +  +++K   K++  
Sbjct: 127 AVENRRKFQAKLIAV 141


>gi|150021291|ref|YP_001306645.1| hypothetical protein Tmel_1413 [Thermosipho melanesiensis BI429]
 gi|259645126|sp|A6LMV9|RIMP_THEM4 RecName: Full=Ribosome maturation factor rimP
 gi|149793812|gb|ABR31260.1| protein of unknown function DUF150 [Thermosipho melanesiensis
           BI429]
          Length = 147

 Score = 51.2 bits (121), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + Q + EE       +    +     L+I ++     ++ +DCE +S+ +   
Sbjct: 4   IVSQVKDIAQKICEEFHLELFDVKYYNKSGRWFLEIIIDNPYDYISTKDCENVSRKLEFE 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           LD  NII   Y L VSSPG++RP+    DF R+ G
Sbjct: 64  LDKINIIPNKYYLTVSSPGLNRPLRNVKDFERFTG 98


>gi|124002856|ref|ZP_01687708.1| 15 kDa protein [Microscilla marina ATCC 23134]
 gi|123992084|gb|EAY31471.1| 15 kDa protein [Microscilla marina ATCC 23134]
          Length = 152

 Score = 51.2 bits (121), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 69/123 (56%), Gaps = 7/123 (5%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           L + ++ D G +++  C  LS+ +   ++ EN+IEG Y LEVSSPG+D P+  +  +++ 
Sbjct: 35  LTVLIDGDQG-VSIDRCATLSRWLGKYIEEENLIEGAYTLEVSSPGVDLPLKNQRQYIKN 93

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  V   +    G+K  ++ K+    +    ++ EK+G K + E +  I FD ++  ++
Sbjct: 94  IGRKVKVSLN-EGGNKTGVLEKV---EDKLIVIQPEKKG-KIIPEKE-EIPFDQIMKTKV 147

Query: 173 IVT 175
           +++
Sbjct: 148 MIS 150


>gi|134102375|ref|YP_001108036.1| hypothetical protein SACE_5928 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291004240|ref|ZP_06562213.1| hypothetical protein SeryN2_06952 [Saccharopolyspora erythraea NRRL
           2338]
 gi|167016718|sp|A4FM36|RIMP_SACEN RecName: Full=Ribosome maturation factor rimP
 gi|133914998|emb|CAM05111.1| protein of unknown function DUF150 [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 185

 Score = 51.2 bits (121), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 60/95 (63%), Gaps = 7/95 (7%)

Query: 23  GDISSVIQPVIEE-MSFRSVQISLLE----EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           G++++ ++PV+ E +S     +  L+     +  L+++ V+ ++G + L +  E+S+A+S
Sbjct: 7   GEVAARLEPVVAEAVSAAGFDLEELDVQQAGRRRLVKVVVDAEEG-VGLDEISEISRAVS 65

Query: 78  PILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
            +LD  E+++ G Y LEV+SPG+DRP+ R   + R
Sbjct: 66  KVLDAHEHVLAGSYTLEVTSPGVDRPLTRPRHWRR 100


>gi|270290315|ref|ZP_06196540.1| hypothetical protein HMPREF9024_00500 [Pediococcus acidilactici
           7_4]
 gi|270281096|gb|EFA26929.1| hypothetical protein HMPREF9024_00500 [Pediococcus acidilactici
           7_4]
          Length = 158

 Score = 51.2 bits (121), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 81/157 (51%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ + +PVIE   F+ V++  ++E +   L+ ++++  G + + +C  +S  +S +LD +
Sbjct: 9   ITELARPVIESHDFQLVEVEFVKEGQGWFLRFYIDKV-GGINIEECAMVSDELSELLDQQ 67

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +   I   Y LEVSSPG +RP+  K D     G  +   +  +S +KQK+    + + E 
Sbjct: 68  DPDPIPQAYFLEVSSPGAERPLKTKEDLAAAVGEYIHISL-YASINKQKVFEGYLKSFEN 126

Query: 142 GF----FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +L+K +  E       + ++++ +  ARL +
Sbjct: 127 DELVLDYLDKTRHKE-------LKVAYNQVAFARLAI 156


>gi|302670326|ref|YP_003830286.1| hypothetical protein bpr_I0962 [Butyrivibrio proteoclasticus B316]
 gi|302394799|gb|ADL33704.1| hypothetical protein bpr_I0962 [Butyrivibrio proteoclasticus B316]
          Length = 154

 Score = 51.2 bits (121), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
           +++ P+ E    R   +  ++E     L+ ++++D G + + +C ++S A+S  LDV++ 
Sbjct: 13  ALLTPIAEANGVRVYDVEYVKEAGEWYLRAYIDKD-GGVDINECVDVSHALSDALDVDDF 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           IE  Y LEVSSPG+ R + +   F    G  V
Sbjct: 72  IEEAYTLEVSSPGLGRQLKKDRHFANSIGQDV 103


>gi|317013844|gb|ADU81280.1| Ribosome maturation factor rimP [Helicobacter pylori Gambia94/24]
          Length = 146

 Score = 51.2 bits (121), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 1/80 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+LDV 
Sbjct: 5   IEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPLLDVC 64

Query: 84  NIIEGHYRLEVSSPGIDRPM 103
           + I+  Y LEVSS G++R +
Sbjct: 65  DFIQDAYTLEVSSMGLERTL 84


>gi|332528892|ref|ZP_08404862.1| hypothetical protein HGR_03237 [Hylemonella gracilis ATCC 19624]
 gi|332041649|gb|EGI78005.1| hypothetical protein HGR_03237 [Hylemonella gracilis ATCC 19624]
          Length = 202

 Score = 51.2 bits (121), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 2/54 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + + DCE++++ +  +L+VE I   + RLEVSSPGIDRP+  + DF R+ G V+
Sbjct: 55  VNVEDCEKVTRQLQYVLEVEGI--EYKRLEVSSPGIDRPLRHEQDFERFAGQVI 106


>gi|315641144|ref|ZP_07896223.1| protein of hypothetical function DUF150 [Enterococcus italicus DSM
           15952]
 gi|315483152|gb|EFU73669.1| protein of hypothetical function DUF150 [Enterococcus italicus DSM
           15952]
          Length = 154

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 65/109 (59%), Gaps = 5/109 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ P+++   F  V++  ++E K+  L++F+++++G + + +C  +S+ +S  LD  
Sbjct: 5   VTDLVVPILDSKHFELVEVEFVKEGKSWFLRVFIDKEEG-IDIEECAWVSEMLSEKLDSI 63

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQ 129
             + I   Y LE+SSPG +RP+ ++ D+ +  G  V   +  +  G+KQ
Sbjct: 64  DPDPIPQAYFLEISSPGAERPLKKEKDYEKAVGSFVHLSLYQAVDGEKQ 112


>gi|254431118|ref|ZP_05044821.1| hypothetical protein CPCC7001_1009 [Cyanobium sp. PCC 7001]
 gi|197625571|gb|EDY38130.1| hypothetical protein CPCC7001_1009 [Cyanobium sp. PCC 7001]
          Length = 158

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)

Query: 32  VIEEMSFRSVQISLLEEK-NLLLQIFVERDDG-NMTLRDCEELSQAISPILDVENII-EG 88
           V  E+ F   Q++LL  +  + LQ+ V+R DG +++L +C  LS  +  + D   ++ E 
Sbjct: 16  VCAELGFELRQVNLLTHRIPMTLQVLVQRGDGRDISLDECAALSAPLGEVFDAAGVLGEE 75

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            Y LE+SSPG+   +  + DF  + G  VA      +G + +  G ++
Sbjct: 76  AYVLEISSPGVSDELQDERDFRSFRGFPVAVRFTDRNGAEARCEGLLL 123


>gi|163857447|ref|YP_001631745.1| hypothetical protein Bpet3135 [Bordetella petrii DSM 12804]
 gi|226703725|sp|A9ITY3|RIMP_BORPD RecName: Full=Ribosome maturation factor rimP
 gi|163261175|emb|CAP43477.1| conserved hypothetical protein [Bordetella petrii]
          Length = 163

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 44/64 (68%), Gaps = 3/64 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++ +++  G + + DCE++S+ +S + +VENI   + RLEV SPG+DRP+  +++  R
Sbjct: 29  LLRVTIDKA-GGVRIEDCEQVSRQLSRVYEVENI--DYKRLEVGSPGVDRPLRTEAELRR 85

Query: 112 WNGH 115
           + G 
Sbjct: 86  FAGE 89


>gi|108562826|ref|YP_627142.1| hypothetical protein HPAG1_0401 [Helicobacter pylori HPAG1]
 gi|122386653|sp|Q1CUA4|RIMP_HELPH RecName: Full=Ribosome maturation factor rimP
 gi|107836599|gb|ABF84468.1| hypothetical protein HPAG1_0401 [Helicobacter pylori HPAG1]
          Length = 146

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|326316664|ref|YP_004234336.1| ribosome maturation factor rimP [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373500|gb|ADX45769.1| Ribosome maturation factor rimP [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 201

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           +T+ DCE++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G VV   +  
Sbjct: 57  VTVEDCEKVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRHEQDFQRFAGEVVDITLKA 114

Query: 124 SSGD 127
             GD
Sbjct: 115 PIGD 118


>gi|238063379|ref|ZP_04608088.1| hypothetical protein MCAG_04345 [Micromonospora sp. ATCC 39149]
 gi|237885190|gb|EEP74018.1| hypothetical protein MCAG_04345 [Micromonospora sp. ATCC 39149]
          Length = 232

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 17/140 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +VI+PV+    +    +S+    +  ++++ V+  DG + L    ++S+A+S  LD  
Sbjct: 43  LHAVIEPVVNAAGYDLEDVSVSRAGRRHVVRVIVD-ADGGINLDAVADVSRAVSAALDAA 101

Query: 84  -----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV-----ACEIVLSSGDKQ---- 129
                +I+ G Y+LEVSSPG+DRP+     + R  G +V     A      +GD+Q    
Sbjct: 102 EEAGGDILAGEYQLEVSSPGVDRPLTLPRHWRRNVGRLVKVTARAVAPGPRAGDRQPTGD 161

Query: 130 -KLIGKIMGTSETGFFLEKE 148
            ++ G+++   +    LE +
Sbjct: 162 RQVTGRVVEADDERVVLETD 181


>gi|317180703|dbj|BAJ58489.1| hypothetical protein HPF32_0907 [Helicobacter pylori F32]
          Length = 146

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|306830061|ref|ZP_07463247.1| hypothetical protein HMPREF8571_1603 [Streptococcus mitis ATCC
           6249]
 gi|304427774|gb|EFM30868.1| hypothetical protein HMPREF8571_1603 [Streptococcus mitis ATCC
           6249]
          Length = 175

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 27  VREVVEPVIQ-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 84

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 85  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLLSFEE 143

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E   +  K   ++  ++   + L+ +L
Sbjct: 144 EELTVEYMDKTRKKTVQIPYSLVSKARLAVKL 175


>gi|270292190|ref|ZP_06198405.1| conserved hypothetical protein [Streptococcus sp. M143]
 gi|293364177|ref|ZP_06610904.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|270279718|gb|EFA25560.1| conserved hypothetical protein [Streptococcus sp. M143]
 gi|291317355|gb|EFE57781.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
          Length = 175

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 27  VREVVEPVIQ-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 84

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 85  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLVSFEE 143

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E   +  K   ++  ++   + L+ +L
Sbjct: 144 DELTMEYMDKTRKKTVQIPYSLVSKARLAVKL 175


>gi|290581069|ref|YP_003485461.1| hypothetical protein SmuNN2025_1543 [Streptococcus mutans NN2025]
 gi|254997968|dbj|BAH88569.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 163

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 21/159 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +  V+ PVI +  F  V I    EK   N +L I V++ +G +T+ D  +L+  ISP+LD
Sbjct: 15  VRPVVAPVIPK-PFELVDIEY--EKLGGNYVLSILVDKPEG-ITVEDTADLTDIISPLLD 70

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL----IGKI 135
               +     Y LE+SSPG++RP+      +   GH +   +   + DK K+    +   
Sbjct: 71  TIKPDPFPEQYMLEISSPGLERPLKTAQSLMNAVGHYINVSL-YQAIDKVKVFEGDLTAF 129

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + T  +L+K ++         + I +  +  ARL V
Sbjct: 130 DGETLTMTYLDKTQQK-------TVTIPYKMVAKARLAV 161


>gi|313680245|ref|YP_004057984.1| hypothetical protein Ocepr_1355 [Oceanithermus profundus DSM 14977]
 gi|313152960|gb|ADR36811.1| protein of unknown function DUF150 [Oceanithermus profundus DSM
           14977]
          Length = 147

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISPILD 81
           D+  +++ V+  + +  +++ L    K  +L + +ER D+  +T+ D +  ++ I   LD
Sbjct: 2   DLWELVENVVRPLGYEPLEVRLHGAGKTQVLTVRLERLDEAPITVADLQRANRIIGLELD 61

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
             + I G YRLEV SPG DRP++ +  F R+ G
Sbjct: 62  RADPIRGSYRLEVESPGPDRPLLTRRHFERFAG 94


>gi|307702468|ref|ZP_07639423.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|307623962|gb|EFO02944.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
          Length = 159

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VREVVEPVIQ-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKVFEGTLVSFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E   +  K   ++  ++   + L+ +L
Sbjct: 128 DELTMEYMDKTRKKTVQIPYSLVSKARLAVKL 159


>gi|313885302|ref|ZP_07819053.1| conserved hypothetical protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619408|gb|EFR30846.1| conserved hypothetical protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 157

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 11/143 (7%)

Query: 29  IQPVIEEM----SFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++P+IEE       R V +  L+E  N  L+++ ++D G + L DC  +S+ +S  LD+ 
Sbjct: 8   VRPIIEETVAANDCRLVDLEYLKEGPNWYLRVYADKD-GGIDLDDCAFISEKLSEALDLI 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEVSSPG +RP+   +D     G  V  +  +    ++   G ++   +T
Sbjct: 67  KPDPFPKSYYLEVSSPGAERPLKTAADIEAAVGEYVHFDYYVPQYGEKFHEGNLLAVEDT 126

Query: 142 GFFLE---KEKRGEKDMNELQIA 161
            + +E   K +R E ++++  +A
Sbjct: 127 LYRIEVKDKTRRKELEIDKKAVA 149


>gi|119485068|ref|ZP_01619453.1| hypothetical protein L8106_06459 [Lyngbya sp. PCC 8106]
 gi|119457296|gb|EAW38421.1| hypothetical protein L8106_06459 [Lyngbya sp. PCC 8106]
          Length = 172

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 1/131 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSV-QISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV E +    V  +        +L++ +   + +  L DCE++S+A+   
Sbjct: 24  LVPKIIDLATPVAEALGLEVVGAVFYTNHSPPVLRVDIRNPNQDTGLDDCEQMSRALEEQ 83

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LE+SSPGI + +    DF+ + G  +      +    ++  GK++   
Sbjct: 84  LDTIDFIPDAYVLEISSPGISQILTSDRDFISFKGFPILIRTSEAYKGYKEWSGKLIRRD 143

Query: 140 ETGFFLEKEKR 150
           ET  +L ++ R
Sbjct: 144 ETAVYLNQKGR 154


>gi|120612039|ref|YP_971717.1| hypothetical protein Aave_3385 [Acidovorax citrulli AAC00-1]
 gi|226703802|sp|A1TSK5|RIMP_ACIAC RecName: Full=Ribosome maturation factor rimP
 gi|120590503|gb|ABM33943.1| protein of unknown function DUF150 [Acidovorax citrulli AAC00-1]
          Length = 202

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           +T+ DCE++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G V+   +  
Sbjct: 58  VTVEDCEKVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRHEQDFQRFAGEVIDITLKA 115

Query: 124 SSGD 127
             GD
Sbjct: 116 PIGD 119


>gi|261839249|gb|ACX99014.1| hypothetical protein HPKB_0406 [Helicobacter pylori 52]
          Length = 146

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|227497550|ref|ZP_03927778.1| YhbC family protein [Actinomyces urogenitalis DSM 15434]
 gi|226833004|gb|EEH65387.1| YhbC family protein [Actinomyces urogenitalis DSM 15434]
          Length = 154

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 13/113 (11%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G++ L    E++Q +S  LD  + ++G Y LEV+SPG +R +     F R  GH      
Sbjct: 53  GDLDLDAVAEVTQTVSDALDEADPVKGQYTLEVTSPGAERELTTPRTFRRATGHQAR--- 109

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++++G  Q L G +    E    +      E D +E  IA  +  LL AR++V
Sbjct: 110 LVTAG--QTLTGTVRSADEETVTV------EVDGSEQTIA--YTDLLEARMVV 152


>gi|86609688|ref|YP_478450.1| hypothetical protein CYB_2246 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123501415|sp|Q2JJI0|RIMP_SYNJB RecName: Full=Ribosome maturation factor rimP
 gi|86558230|gb|ABD03187.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 156

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 7/135 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN---LLLQIFVERDDGNMTLRDCEELSQAIS 77
           L   + S+ +P+  ++ ++ VQ+     ++   L + I     D   +  DCE +SQA+ 
Sbjct: 5   LIPQLESLARPLAAQLGYQLVQMVFHTNQHPPVLRVDIRPLDPDRETSHADCEAMSQALE 64

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI--GKI 135
             LD  ++I G Y LEVSSPGI   +    DF+ + G   A E+ L    K K +  G +
Sbjct: 65  VELDRVDLIPGQYVLEVSSPGISNLLTSDRDFVVFKG--FAVEVTLDPPYKGKAVWSGHL 122

Query: 136 MGTSETGFFLEKEKR 150
           +G  E    L  + R
Sbjct: 123 LGRDEERVALSLKGR 137


>gi|332673248|gb|AEE70065.1| conserved hypothetical protein [Helicobacter pylori 83]
          Length = 146

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|259585814|sp|B5Z6E8|RIMP_HELPG RecName: Full=Ribosome maturation factor rimP
          Length = 146

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|188527211|ref|YP_001909898.1| hypothetical protein HPSH_02090 [Helicobacter pylori Shi470]
 gi|226701161|sp|B2USN6|RIMP_HELPS RecName: Full=Ribosome maturation factor rimP
 gi|188143451|gb|ACD47868.1| hypothetical protein HPSH_02090 [Helicobacter pylori Shi470]
 gi|261837834|gb|ACX97600.1| hypothetical protein KHP_0389 [Helicobacter pylori 51]
 gi|297379622|gb|ADI34509.1| UPF0090 protein [Helicobacter pylori v225d]
 gi|308061753|gb|ADO03641.1| Ribosome maturation factor rimP [Helicobacter pylori Cuz20]
 gi|308063263|gb|ADO05150.1| Ribosome maturation factor rimP [Helicobacter pylori Sat464]
          Length = 146

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|171058382|ref|YP_001790731.1| hypothetical protein Lcho_1699 [Leptothrix cholodnii SP-6]
 gi|226736416|sp|B1XY65|RIMP_LEPCP RecName: Full=Ribosome maturation factor rimP
 gi|170775827|gb|ACB33966.1| protein of unknown function DUF150 [Leptothrix cholodnii SP-6]
          Length = 183

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 22/136 (16%)

Query: 52  LLQIFVERDDGNMTL---------RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           LL ++++R  G++ L          DCE +++ +  + +VEN+   + RLEVSSPG+DRP
Sbjct: 28  LLCVYIDRVPGSVYLTGPGEFVLVEDCELVTRQLRYLFEVENV--DYSRLEVSSPGLDRP 85

Query: 103 MVRKSDFLRWNGHVVACEIVLSS---GDK--QKLIGKIMGTSETGFFLEKEKRGEKDMNE 157
           + +  DFLR+ G  V  ++ L +   G K  + L+ +   T E GF L  +   E  +  
Sbjct: 86  LRKVGDFLRFLGSDV--DVTLKAPFQGRKNYRGLLRQAGDTPEQGFELVFQDGKEDKV-- 141

Query: 158 LQIAISFDSLLSARLI 173
             +  + D +  ARL+
Sbjct: 142 --LGFALDEVREARLV 155


>gi|319947586|ref|ZP_08021816.1| hypothetical protein containing DUF150 [Streptococcus australis
           ATCC 700641]
 gi|319746274|gb|EFV98537.1| hypothetical protein containing DUF150 [Streptococcus australis
           ATCC 700641]
          Length = 195

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++QP I+   F  V +   +   + +L IFV++  G +TL D  +L++ ISP+LD  
Sbjct: 47  VTEILQPAIQ-APFELVDVEYGKMGGDYVLSIFVDKP-GGITLNDTADLTEVISPLLDQI 104

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LEV+SPG++RP+  K    +  G  +   +   + DKQK+I G ++   +
Sbjct: 105 QPDPFPEQYFLEVTSPGLERPLKTKDAVEKSLGQYIHVSL-YKAVDKQKVIEGTLVKFED 163

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E   +  K   E+  ++   + L+ +L
Sbjct: 164 DQLTMEYMDKTRKKTIEIPYSLVSKARLAVKL 195


>gi|256830178|ref|YP_003158906.1| hypothetical protein Dbac_2411 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579354|gb|ACU90490.1| protein of unknown function DUF150 [Desulfomicrobium baculatum DSM
           4028]
          Length = 162

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 4/121 (3%)

Query: 28  VIQPVIEEMSFRSVQISLLEE---KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ P+ E        I LL     ++ +++++++   G + + +C E+S+ +S  LDVE+
Sbjct: 13  MVTPLCEARDLEVWGIELLFAAGGRHKIVRVYLDSQQG-VGIDECSEVSRHLSLALDVED 71

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           II G + LEVSSPG++RP       L + G  V   +      ++   G+++      F 
Sbjct: 72  IIPGAFNLEVSSPGLERPFFSTEQMLPYVGQTVRIRLDNPLEGRKNFKGRLLSIESPMFT 131

Query: 145 L 145
           L
Sbjct: 132 L 132


>gi|311748746|ref|ZP_07722531.1| hypothetical protein ALPR1_20868 [Algoriphagus sp. PR1]
 gi|126577280|gb|EAZ81528.1| hypothetical protein ALPR1_20868 [Algoriphagus sp. PR1]
          Length = 157

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 5/91 (5%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L I ++ D G + ++ C  +S+A++  L+ + ++   Y LEVSSPG+D P+  +  F +
Sbjct: 36  VLSILIDADQG-LNVQTCANVSRAVAEELEAKELMSEAYILEVSSPGVDYPLSSRRQFQK 94

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
             G     +++L+SG  Q+L GK++    TG
Sbjct: 95  NIGR--ELKVLLTSG--QELKGKLLEVDTTG 121


>gi|241764250|ref|ZP_04762281.1| protein of unknown function DUF150 [Acidovorax delafieldii 2AN]
 gi|241366373|gb|EER60895.1| protein of unknown function DUF150 [Acidovorax delafieldii 2AN]
          Length = 197

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 39/54 (72%), Gaps = 2/54 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +T+ DCE++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF+R+ G V+
Sbjct: 53  ITVEDCEKVTRQLQFALEVDGV--EYKRLEVSSPGIDRPLRHEQDFVRFEGSVI 104


>gi|90961544|ref|YP_535460.1| hypothetical protein LSL_0568 [Lactobacillus salivarius UCC118]
 gi|227890632|ref|ZP_04008437.1| protein of hypothetical function DUF150 [Lactobacillus salivarius
           ATCC 11741]
 gi|301300280|ref|ZP_07206489.1| conserved hypothetical protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|122449172|sp|Q1WUF8|RIMP_LACS1 RecName: Full=Ribosome maturation factor rimP
 gi|90820738|gb|ABD99377.1| Conserved hypothetical protein [Lactobacillus salivarius UCC118]
 gi|227867570|gb|EEJ74991.1| protein of hypothetical function DUF150 [Lactobacillus salivarius
           ATCC 11741]
 gi|300852121|gb|EFK79796.1| conserved hypothetical protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 157

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 56/90 (62%), Gaps = 4/90 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +++++ P+++E  F  V +  ++E K+  L++++++ +G + + +C  +S  +S  LD  
Sbjct: 8   VTNLVTPILDENHFELVDVEFVKEGKSWYLRVYIDKPNG-INIEECALVSDKLSEKLDSC 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
             + I   Y LEVSSPG +RP+ ++ D+ R
Sbjct: 67  DPDPIPQAYYLEVSSPGAERPLKKEKDYER 96


>gi|307067173|ref|YP_003876139.1| hypothetical protein SPAP_0544 [Streptococcus pneumoniae AP200]
 gi|306408710|gb|ADM84137.1| Uncharacterized protein conserved in bacteria [Streptococcus
           pneumoniae AP200]
          Length = 134

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 9/128 (7%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           +++L IFV++ +G +TL D  +L++ ISP+LD    +     Y LE++SPG++RP+  K 
Sbjct: 11  DMILSIFVDKPEG-ITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLERPLKTKD 69

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
                 G  +   +   + DKQK+  G ++   E    +E   +  K    +QI  S  S
Sbjct: 70  AVAGAVGKYIHVGL-YQAIDKQKVFEGTLLAFEEDELTMEYMDKTRK--KTVQIPYSLVS 126

Query: 167 LLSARLIV 174
              ARL V
Sbjct: 127 --KARLAV 132


>gi|317179205|dbj|BAJ56993.1| hypothetical protein HPF30_0896 [Helicobacter pylori F30]
          Length = 146

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|254779091|ref|YP_003057196.1| hypothetical protein HELPY_0404 [Helicobacter pylori B38]
 gi|254001002|emb|CAX28946.1| Conserved hypothetical protein [Helicobacter pylori B38]
          Length = 146

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+LDV 
Sbjct: 5   IEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPLLDVC 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I+  Y LEVSS G++R +     F
Sbjct: 65  DFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|262370082|ref|ZP_06063409.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315121|gb|EEY96161.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 174

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 41/73 (56%)

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           ++DC  ++Q +  ++DV + I G Y LEVSSPG DRP  +      + G  +A  ++ + 
Sbjct: 69  VQDCVRVTQQVGAMMDVHDPISGEYALEVSSPGWDRPFFQLEQLPAYIGQQIAFRLISAV 128

Query: 126 GDKQKLIGKIMGT 138
            +++K   K++  
Sbjct: 129 DNRRKFQAKLVAV 141


>gi|312130304|ref|YP_003997644.1| hypothetical protein Lbys_1583 [Leadbetterella byssophila DSM
           17132]
 gi|311906850|gb|ADQ17291.1| protein of unknown function DUF150 [Leadbetterella byssophila DSM
           17132]
          Length = 151

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 84/158 (53%), Gaps = 10/158 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  +++ +I +  +  V+I++ + K    + IF++ D G +T+  C E+S+ + 
Sbjct: 1   MSLKDTVIKLVEDLIRDTDYYVVEIAVSDSKIRRKVSIFLDSDAG-ITIDQCTEVSRKLG 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L +E +I+  + LEVSSPG D P+  +  +++  G   + +I+   G + K  GK++ 
Sbjct: 60  --LQLEEVIDEAFTLEVSSPGADSPLKFERQYVKNIGR--SLKILKVDGSEIK--GKLVS 113

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                  +E E   +K +    +A+S D +  A++I++
Sbjct: 114 VENGSITIETE--AKKKVKSETVALSLDEIKEAKVIIS 149


>gi|317009046|gb|ADU79626.1| Ribosome maturation factor rimP [Helicobacter pylori India7]
          Length = 146

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|220907501|ref|YP_002482812.1| hypothetical protein Cyan7425_2088 [Cyanothece sp. PCC 7425]
 gi|254801539|sp|B8HUA6|RIMP_CYAP4 RecName: Full=Ribosome maturation factor rimP
 gi|219864112|gb|ACL44451.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7425]
          Length = 154

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 50/100 (50%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L++ +     + +L DCE +S  +   LD  +++ G Y LEVSSPGI R +    +F+ 
Sbjct: 37  VLRVDIRNLSADTSLEDCERMSHRLETALDAADLVAGTYVLEVSSPGISRLLSSDREFVS 96

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           + G  V          +++ +G ++   E   +L ++ R 
Sbjct: 97  FRGFSVIVRTREPIAGQREWVGNLVQRDEEFVYLNQKGRA 136


>gi|15611447|ref|NP_223098.1| hypothetical protein jhp0379 [Helicobacter pylori J99]
 gi|6648012|sp|Q9ZM44|RIMP_HELPJ RecName: Full=Ribosome maturation factor rimP
 gi|4154909|gb|AAD05958.1| putative [Helicobacter pylori J99]
          Length = 146

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|71064648|ref|YP_263375.1| hypothetical protein Psyc_0067 [Psychrobacter arcticus 273-4]
 gi|91207994|sp|Q4FVL7|RIMP_PSYA2 RecName: Full=Ribosome maturation factor rimP
 gi|71037633|gb|AAZ17941.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 166

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVER------DDGNMTLRDCEELSQAI 76
           +++++I P +         I    + N  LL+I++E        +  +T+ +C  ++  +
Sbjct: 9   ELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIENCAAVNHQV 68

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S IL+V + I G + LEVSSPG DR          + G  V+  ++ + G+  K   K  
Sbjct: 69  SGILEVHDPIAGEFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEGDKKRRKAT 128

Query: 137 GT 138
           GT
Sbjct: 129 GT 130


>gi|93004903|ref|YP_579340.1| hypothetical protein Pcryo_0072 [Psychrobacter cryohalolentis K5]
 gi|122416155|sp|Q1QEP7|RIMP_PSYCK RecName: Full=Ribosome maturation factor rimP
 gi|92392581|gb|ABE73856.1| protein of unknown function DUF150 [Psychrobacter cryohalolentis
           K5]
          Length = 166

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVER------DDGNMTLRDCEELSQAI 76
           +++++I P +         I    + N  LL+I++E        +  +T+ +C  ++  +
Sbjct: 9   ELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIENCAAVNHQV 68

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S IL+V + I G + LEVSSPG DR          + G  V+  ++ + G+  K   K  
Sbjct: 69  SGILEVHDPISGEFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEGDKKRRKAT 128

Query: 137 GT 138
           GT
Sbjct: 129 GT 130


>gi|327403852|ref|YP_004344690.1| Ribosome maturation factor rimP [Fluviicola taffensis DSM 16823]
 gi|327319360|gb|AEA43852.1| Ribosome maturation factor rimP [Fluviicola taffensis DSM 16823]
          Length = 158

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 70/131 (53%), Gaps = 25/131 (19%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           ++++ +++ +GN+++ DC  +S+ I   LD E+     + L VSS G+D+P+   + +++
Sbjct: 34  VIRLELDKTEGNVSIEDCMSVSRNIEHNLDRED---ADFELSVSSAGLDKPLRVHAQYVK 90

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR----GEK-------------- 153
             G     ++ L S  K+K+ G ++   ETG  L+ E++    G+K              
Sbjct: 91  NIGR--GLDVKLKS--KEKVTGTLISVDETGVVLQHEEKQAIEGKKKKELVVIENKIAFS 146

Query: 154 DMNELQIAISF 164
           D+NE +I ISF
Sbjct: 147 DINEAKIVISF 157


>gi|308184203|ref|YP_003928336.1| Ribosome maturation factor rimP [Helicobacter pylori SJM180]
 gi|308060123|gb|ADO02019.1| Ribosome maturation factor rimP [Helicobacter pylori SJM180]
          Length = 146

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 54/84 (64%), Gaps = 1/84 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPM 103
           LDV + I+  Y LEVSS G++R +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTL 84


>gi|323697470|ref|ZP_08109382.1| protein of unknown function DUF150 [Desulfovibrio sp. ND132]
 gi|323457402|gb|EGB13267.1| protein of unknown function DUF150 [Desulfovibrio desulfuricans
           ND132]
          Length = 152

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 2/115 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S +I+P +E + +    + S    K  +++I+++   G + +  C E+S+ +  +L+VE
Sbjct: 9   LSDMIRPEVENLGYVFWGLASPSSGKKRVVRIYIDAP-GGVNIDQCAEVSRQVGLMLEVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++I G + LEVSSPG++RP    +    + G  V   +      ++K  G++ G 
Sbjct: 68  DVIPGAFVLEVSSPGLERPFFAPAQLADYVGRKVDVLLFEPLDGRRKFKGELTGV 122


>gi|306824617|ref|ZP_07457962.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|315611733|ref|ZP_07886655.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
 gi|304433185|gb|EFM36156.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|315316148|gb|EFU64178.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
          Length = 175

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 6/110 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 27  VREVVEPVIQ-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 84

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+
Sbjct: 85  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKV 133


>gi|331265776|ref|YP_004325406.1| hypothetical protein SOR_0379 [Streptococcus oralis Uo5]
 gi|326682448|emb|CBZ00065.1| conserved hypothetical protein [Streptococcus oralis Uo5]
          Length = 175

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 6/110 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 27  VREVVEPVIQ-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPVLDTI 84

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+
Sbjct: 85  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKV 133


>gi|213026073|ref|ZP_03340520.1| hypothetical protein Salmonelentericaenterica_28018 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 59

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           +S  +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K
Sbjct: 1   MSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRK 59


>gi|207093098|ref|ZP_03240885.1| hypothetical protein HpylHP_09959 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 146

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+LDV 
Sbjct: 5   IEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPLLDVC 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I+  Y LEVSS G++R +     F
Sbjct: 65  DFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|322391043|ref|ZP_08064547.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 903]
 gi|321142273|gb|EFX37747.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 903]
          Length = 159

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILD-- 81
           ++ VIQP I+E  F  V +   +   + +L IFV++ +G +TL D  +L++ ISP+LD  
Sbjct: 11  VTEVIQPAIQE-PFELVDVEYGKMGGDYVLSIFVDKPEG-ITLNDTADLTEIISPLLDQI 68

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LEV+SPG++RP+  K       G  V   +   + +KQK+  G ++   E
Sbjct: 69  KPDPFPEQYFLEVTSPGLERPLKTKQALEGALGKYVNISL-YKAVEKQKVFEGTLVRFEE 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K   E    I ++ +  ARL V
Sbjct: 128 DVLTIEYMDKTRKKTVE----IPYNLVSKARLAV 157


>gi|116495059|ref|YP_806793.1| hypothetical protein LSEI_1577 [Lactobacillus casei ATCC 334]
 gi|191638562|ref|YP_001987728.1| hypothetical protein LCABL_17900 [Lactobacillus casei BL23]
 gi|239631346|ref|ZP_04674377.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066622|ref|YP_003788645.1| hypothetical protein LCAZH_1564 [Lactobacillus casei str. Zhang]
 gi|122263524|sp|Q038M1|RIMP_LACC3 RecName: Full=Ribosome maturation factor rimP
 gi|259585801|sp|B3WER9|RIMP_LACCB RecName: Full=Ribosome maturation factor rimP
 gi|116105209|gb|ABJ70351.1| hypothetical protein LSEI_1577 [Lactobacillus casei ATCC 334]
 gi|190712864|emb|CAQ66870.1| Putative uncharacterized protein [Lactobacillus casei BL23]
 gi|239525811|gb|EEQ64812.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300439029|gb|ADK18795.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
 gi|327382600|gb|AEA54076.1| Ribosome maturation factor rimP [Lactobacillus casei LC2W]
 gi|327385798|gb|AEA57272.1| Ribosome maturation factor rimP [Lactobacillus casei BD-II]
          Length = 159

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++++++P++++  F    +  ++E     L++++++  G +TL +C  +S+A+S  LD  
Sbjct: 10  VTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDKT-GGITLDECVMVSEALSEKLDAM 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDF 109
             + I   Y LEVSSPG +RP+  ++D+
Sbjct: 69  DPDPIPQQYFLEVSSPGAERPLKHETDY 96


>gi|300866112|ref|ZP_07110840.1| Ribosome maturation factor rimP [Oscillatoria sp. PCC 6506]
 gi|300335908|emb|CBN55998.1| Ribosome maturation factor rimP [Oscillatoria sp. PCC 6506]
          Length = 153

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 53/99 (53%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L++ +     +  L DCE +S+A+   LD+ +I+   Y LE+SSPG+ R +    +F+ 
Sbjct: 37  ILRVDIRNPQQDTGLEDCERMSKALEEKLDMADILPDAYVLEISSPGLSRSLASDREFIS 96

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
           + G  V  +   +    ++ +G+++   E   ++ ++ R
Sbjct: 97  FKGFPVIVKTSEAYNGLKEWVGQLIRRDEKAVYINQKGR 135


>gi|210134596|ref|YP_002301035.1| hypothetical protein HPP12_0398 [Helicobacter pylori P12]
 gi|226706095|sp|B6JKX7|RIMP_HELP2 RecName: Full=Ribosome maturation factor rimP
 gi|210132564|gb|ACJ07555.1| hypothetical protein HPP12_0398 [Helicobacter pylori P12]
          Length = 146

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   I+ VIE + +    +SL++E ++ +L++ ++  +G ++L  C+++S+ ISP+LDV 
Sbjct: 5   IEEKIEGVIESLGYLLYDVSLVKENEHNILRVSLKNPNGAVSLDICQQVSEIISPLLDVC 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I+  Y LEVSS G++R +     F
Sbjct: 65  DFIQDAYILEVSSMGLERVLKTPKHF 90


>gi|170017454|ref|YP_001728373.1| YlxS [Leuconostoc citreum KM20]
 gi|259585783|sp|B1MZH7|RIMP_LEUCK RecName: Full=Ribosome maturation factor rimP
 gi|169804311|gb|ACA82929.1| YlxS [Leuconostoc citreum KM20]
          Length = 158

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 14/158 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVE-RDDGNMTLRDCEELSQAISP 78
           +A +IS++I+P+I         +S  +E    +L+I ++ R+   +T+ D    +QA++ 
Sbjct: 5   VAQEISTLIEPLINAQQLLLWDVSYTKEGGQKVLRILIDKRNHEFITMDDITTFTQAVNE 64

Query: 79  ILDV--ENIIEGHYRLEVSSPGIDRPMVRKS--DFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +LD    + I   Y L++SSPG DRP++R    ++ + +G  +     ++   ++K  GK
Sbjct: 65  LLDTIEPDPIPEAYMLDISSPGADRPLIRPWHYEWAKASGENILVAFFVAKNGQKKWQGK 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           I    + G  L              I  +FD +  A L
Sbjct: 125 IETIDDKGITLTTSSE--------TIVCTFDEIAKAVL 154


>gi|315586392|gb|ADU40773.1| conserved hypothetical protein [Helicobacter pylori 35A]
 gi|317181743|dbj|BAJ59527.1| hypothetical protein HPF57_0453 [Helicobacter pylori F57]
          Length = 146

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL+ E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIRENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|24378910|ref|NP_720865.1| hypothetical protein SMU.417 [Streptococcus mutans UA159]
 gi|34222873|sp|Q8DVQ3|RIMP_STRMU RecName: Full=Ribosome maturation factor rimP
 gi|24376793|gb|AAN58171.1|AE014888_9 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 163

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 9/98 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +  V+ PVI +  F  V I    EK   N +L I V++ +G +T+ D  +L+  ISP+LD
Sbjct: 15  VRPVVAPVIPK-PFELVDIEY--EKLGGNYVLSILVDKPEG-ITVEDTADLTDIISPLLD 70

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
               +     Y LE+SSPG++RP+      +   GH +
Sbjct: 71  TIKPDPFPEQYMLEISSPGLERPLKTAQSLMNAVGHYI 108


>gi|227495146|ref|ZP_03925462.1| protein of hypothetical function DUF150 [Actinomyces coleocanis DSM
           15436]
 gi|226831598|gb|EEH63981.1| protein of hypothetical function DUF150 [Actinomyces coleocanis DSM
           15436]
          Length = 168

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 10/152 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELSQAISPILDVENII 86
           ++PV++        + + E    +++I V+ ++G   ++  D +E+S  IS  LD  + I
Sbjct: 14  VEPVVKAQGLFLEDVKVSERSETVVRIIVDLEEGTYLVSSDDLQEVSWKISEALDAADPI 73

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           E  Y LE+S+PG +R +     + R    +V  ++     DK +L G I    E+   LE
Sbjct: 74  EQAYTLEISTPGAERKLHTPRHYRRSLNRLVEIKL----ADKSELRGFIREVGESELTLE 129

Query: 147 KEKRGEKDMNELQ----IAISFDSLLSARLIV 174
           +E +  K   + +    + +SF+++  AR+ V
Sbjct: 130 EEAKAPKPGMKPKPGKLVTVSFENISKARVRV 161


>gi|241889857|ref|ZP_04777155.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
 gi|241863479|gb|EER67863.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
          Length = 154

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + ++     E   F    +  ++E     L+I+ ++D G +TL DC  LS+ ++
Sbjct: 1   MSIVEKVKAIATKQAENTEFSLYDVEYVKEGTEYFLRIYFDKD-GGLTLDDCVLLSEKLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPM 103
             LD E+ I   Y LEVSSPGI+R +
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERDL 85


>gi|328955635|ref|YP_004372968.1| protein of unknown function DUF150 [Coriobacterium glomerans PW2]
 gi|328455959|gb|AEB07153.1| protein of unknown function DUF150 [Coriobacterium glomerans PW2]
          Length = 167

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)

Query: 35  EMSFRSVQISLLE----EKNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGH 89
           E S R + I  +E     K   +++ +E+ DG+ ++L D    +  +S +++  + + G 
Sbjct: 17  EASARDIDIVDVELTGATKAPCVRVRLEKADGSALSLDDVCAQNCWVSAVVEDIDPVAGR 76

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIMGTSETGFFLEK 147
           Y LEVSSPG+ RP+ R  DF R+ G       + + G   + +L G I   +E    +  
Sbjct: 77  YTLEVSSPGMARPLRRPRDFARFVGQTAQIGFIQTQGPDGRSRLTGLIQSANEDCVTI-A 135

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            K GE       +A+ F+++  A L  + +  RA
Sbjct: 136 PKDGEP------LAVPFEAIKKATLKPSYDFGRA 163


>gi|158334114|ref|YP_001515286.1| hypothetical protein AM1_0930 [Acaryochloris marina MBIC11017]
 gi|259585654|sp|B0BZP6|RIMP_ACAM1 RecName: Full=Ribosome maturation factor rimP
 gi|158304355|gb|ABW25972.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 150

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +L++ +   D +  L DCE++S+A+  +LD +++    Y LE+SSPG+   +    DF+ 
Sbjct: 33  VLRVDIRNCDADTGLEDCEKMSRALEAVLDEDDVFPEAYVLEISSPGLSTLLTCDRDFVS 92

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           + G  V  +         + IG + G  E   F++  ++G
Sbjct: 93  FRGFPVLVQTHQPYRGHHQWIGNLTGRDEK--FVQLNQKG 130


>gi|260221429|emb|CBA29983.1| UPF0090 protein Daci_2988 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 199

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           + + DCE++++ +   L+V+ +   + RLEVSSPGIDRP+    DF R+ GHV+
Sbjct: 51  VNVEDCEKVTRQLQFALEVDGV--EYKRLEVSSPGIDRPLRHTQDFERFAGHVI 102


>gi|210634028|ref|ZP_03297946.1| hypothetical protein COLSTE_01864 [Collinsella stercoris DSM 13279]
 gi|210158972|gb|EEA89943.1| hypothetical protein COLSTE_01864 [Collinsella stercoris DSM 13279]
          Length = 164

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  ++  + I G Y LEVSSPG+ RP+ R SDF R+ G  V        G ++   G I
Sbjct: 63  VSDTVEALDPIAGAYTLEVSSPGMKRPLRRPSDFARFAGEEVELTTTAMEG-RRSYKGVI 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             T++T   ++ E        E  + ISFD +    L
Sbjct: 122 AETTDTAVTIQPE-------GEEAVTISFDDVKKCTL 151


>gi|319939748|ref|ZP_08014105.1| ribosome maturation factor rimP [Streptococcus anginosus 1_2_62CV]
 gi|319811086|gb|EFW07397.1| ribosome maturation factor rimP [Streptococcus anginosus 1_2_62CV]
          Length = 162

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVI+E  +  V I   +   + +L IFV++  G +T+ D  +L+  ISP+LD  
Sbjct: 14  VKEVVEPVIQE-PYELVNIDYGKMGSDHVLSIFVDKS-GGITVNDTADLTDIISPLLDTI 71

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEV+SPG++RP+  K       G  +   +  +    +   G ++   E 
Sbjct: 72  KPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGQYIHVSLYQAVDKSKTFEGTLLSFEED 131

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +E   +  K +    + I +  +  ARL V
Sbjct: 132 HLTMEYMDKTRKKV----VQIPYKLVSKARLAV 160


>gi|227534930|ref|ZP_03964979.1| protein of hypothetical function DUF150 [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227187686|gb|EEI67753.1| protein of hypothetical function DUF150 [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 150

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++++++P++++  F    +  ++E     L++++++  G +TL +C  +S+A+S  LD  
Sbjct: 1   MTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDKT-GGITLDECVMVSEALSEKLDAM 59

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDF 109
             + I   Y LEVSSPG +RP+  ++D+
Sbjct: 60  DPDPIPQQYFLEVSSPGAERPLKHETDY 87


>gi|217033305|ref|ZP_03438736.1| hypothetical protein HP9810_9g58 [Helicobacter pylori 98-10]
 gi|216944246|gb|EEC23671.1| hypothetical protein HP9810_9g58 [Helicobacter pylori 98-10]
          Length = 146

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y  EVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYIFEVSSMGLERTLKTPKHF 90


>gi|284929276|ref|YP_003421798.1| hypothetical protein UCYN_07210 [cyanobacterium UCYN-A]
 gi|284809720|gb|ADB95417.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
          Length = 125

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PVI+EM    V +     K   +L+  +     N++L DC ++S+ +  I
Sbjct: 5   LIQQIIDLTTPVIKEMGIDIVNVVFHTNKCPSILRFDISNPAENISLDDCAKVSRTLESI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           LD   II   Y LEVSSPGI + +  + DF  + G  +
Sbjct: 65  LDETTIIPHAYVLEVSSPGISQILNSERDFTTFQGFAI 102


>gi|253995582|ref|YP_003047646.1| hypothetical protein Mmol_0209 [Methylotenera mobilis JLW8]
 gi|253982261|gb|ACT47119.1| protein of unknown function DUF150 [Methylotenera mobilis JLW8]
          Length = 161

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 76/141 (53%), Gaps = 18/141 (12%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-----GNMTLRDCEELSQAISP 78
           D+ ++I+  + ++ +  V + +   +  LL++F+++ +      ++ + DC  +S  +  
Sbjct: 3   DLQTLIEKSVSQLGYELVDLEI-SNRGKLLRVFIDKQNPADSKDSVNIDDCVLVSNQLGN 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD----------- 127
           +L VE+ I+ + RLEVSSPG+DR + +++D++R+ G  V+ ++ +   D           
Sbjct: 62  LLAVEHEID-YDRLEVSSPGMDRVLKKEADYVRFVGERVSIKLRVGIKDEGPNATETTLP 120

Query: 128 KQKLIGKIMGTSETGFFLEKE 148
           ++  +G I G  +    LE E
Sbjct: 121 RKTFLGLIQGVEDGHLLLEFE 141


>gi|118474205|ref|YP_892625.1| hypothetical protein CFF8240_1491 [Campylobacter fetus subsp. fetus
           82-40]
 gi|261885775|ref|ZP_06009814.1| hypothetical protein CfetvA_11986 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|259585736|sp|A0RQZ2|RIMP_CAMFF RecName: Full=Ribosome maturation factor rimP
 gi|118413431|gb|ABK81851.1| hypothetical protein CFF8240_1491 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 140

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 67/125 (53%), Gaps = 12/125 (9%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E   ++ ++++ ++ G ++L +CE +S+ +SPI DV   + G + LEVSSPG++R + + 
Sbjct: 23  ENGRVIYRVYITKN-GGVSLEECEAVSKLLSPIYDVMPPVSGEWILEVSSPGLERKLSKI 81

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
             F    G     +I+L+  DK ++ GKI+   +    +  +       N   I + F++
Sbjct: 82  EHFTLSIGEFA--KIILN--DKTEIKGKIVSVKDDNICINIK-------NNESIEVKFEN 130

Query: 167 LLSAR 171
           +  A+
Sbjct: 131 IKKAK 135


>gi|207109808|ref|ZP_03243970.1| hypothetical protein HpylH_11664 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 143

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 54/83 (65%), Gaps = 1/83 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++ VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+LDV + I
Sbjct: 5   LLEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPLLDVCDFI 64

Query: 87  EGHYRLEVSSPGIDRPMVRKSDF 109
           +  Y LEVSS G++R +     F
Sbjct: 65  QDAYILEVSSMGLERTLKTPKHF 87


>gi|152990172|ref|YP_001355894.1| hypothetical protein NIS_0423 [Nitratiruptor sp. SB155-2]
 gi|167012920|sp|A6Q228|RIMP_NITSB RecName: Full=Ribosome maturation factor rimP
 gi|151422033|dbj|BAF69537.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 142

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 4/68 (5%)

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           L+ C E+S  ISP+LDV   + G Y LEVSSPG++R + + S F     H V  ++ ++ 
Sbjct: 44  LQKCVEISNLISPLLDVHPPVSGDYNLEVSSPGVERKLKKPSHF----EHSVGEKVRVTK 99

Query: 126 GDKQKLIG 133
            D + + G
Sbjct: 100 NDGETIEG 107


>gi|159036963|ref|YP_001536216.1| hypothetical protein Sare_1324 [Salinispora arenicola CNS-205]
 gi|259586188|sp|A8M743|RIMP_SALAI RecName: Full=Ribosome maturation factor rimP
 gi|157915798|gb|ABV97225.1| protein of unknown function DUF150 [Salinispora arenicola CNS-205]
          Length = 219

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 14/112 (12%)

Query: 19  MGLAGDISS-------VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCE 70
           +G  GD+++       V++PV++   +    +S+    +  ++Q+ V+  DG + L    
Sbjct: 29  VGRGGDLATRRARLHQVVEPVVQGAGYDLEDLSVSRAGRRHVVQVIVD-ADGGVDLDAVA 87

Query: 71  ELSQAISPILDVE-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           ++S+A+S  LD       +I+ G Y+LEVSSPG+ RP+     + R  G +V
Sbjct: 88  DVSRAVSAALDAAEEVGGDIVAGEYQLEVSSPGVARPLTLPRHWRRNTGRLV 139


>gi|317177213|dbj|BAJ55002.1| hypothetical protein HPF16_0405 [Helicobacter pylori F16]
          Length = 146

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 55/90 (61%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ +IE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGMIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|259645270|sp|A1WLI5|RIMP_VEREI RecName: Full=Ribosome maturation factor rimP
          Length = 245

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 2/55 (3%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           ++TL DCE++++ +   L+V+ +   + RLEV+SPGIDRP+  + D LR+ G V+
Sbjct: 99  SVTLEDCEKVTRQLQFALEVDGVQ--YQRLEVASPGIDRPLRGEQDLLRFAGSVI 151


>gi|297537314|ref|YP_003673083.1| hypothetical protein M301_0118 [Methylotenera sp. 301]
 gi|297256661|gb|ADI28506.1| protein of unknown function DUF150 [Methylotenera sp. 301]
          Length = 161

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 60/97 (61%), Gaps = 7/97 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-----GNMTLRDCEELSQAISP 78
           D+ ++I+  + ++ +  V + +   +  LL++F+++ +      ++ + DC  +S  +  
Sbjct: 3   DLHTLIEKSVSQLGYELVDLEI-SNRGKLLRVFIDKLNPADIKDSVNIDDCSLVSNQLGN 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           +L VEN I+ + RLEVSSPG+DR + +++DF+R+ G 
Sbjct: 62  LLAVENDID-YDRLEVSSPGMDRVLKKEADFVRFIGE 97


>gi|288904584|ref|YP_003429805.1| hypothetical protein GALLO_0368 [Streptococcus gallolyticus UCN34]
 gi|306830579|ref|ZP_07463746.1| protein of hypothetical function DUF150 [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325977558|ref|YP_004287274.1| hypothetical protein SGGBAA2069_c03580 [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288731309|emb|CBI12860.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
 gi|304427297|gb|EFM30402.1| protein of hypothetical function DUF150 [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325177486|emb|CBZ47530.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 177

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 21/159 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           ++ V+ P I+E  F  V +    EK   + +L I +++ +G +T+ D  EL++ ISP+LD
Sbjct: 29  VTEVVAPAIKE-PFELVDVEY--EKMGSDYVLSILIDKPEG-ITVDDTAELTEIISPLLD 84

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM-- 136
               +     Y LEVSSPG++RP+  K    +  G  V   +   + DK K+  G ++  
Sbjct: 85  AIKPDPFPEQYMLEVSSPGLERPLKTKEALEKAVGSYVNVSL-YKAIDKVKVFQGDLVAF 143

Query: 137 -GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + T  +L+K ++         + I + ++  ARL V
Sbjct: 144 DGDTLTIDYLDKTRKK-------TVEIPYSTVAKARLAV 175


>gi|114566430|ref|YP_753584.1| hypothetical protein Swol_0896 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|122318498|sp|Q0AYJ1|RIMP_SYNWW RecName: Full=Ribosome maturation factor rimP
 gi|114337365|gb|ABI68213.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 139

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 3/91 (3%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E K   L++F+++D+G + L  C + ++AI    D + I   +  LEVSSPG+DR + ++
Sbjct: 21  ENKEQFLRVFIDKDNG-VDLDMCSQANRAIKESFDEQEIPYDY--LEVSSPGLDRVLKKE 77

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            D+ R++G+ V  +   S    Q++ G ++G
Sbjct: 78  RDWERFSGYRVRIKTRKSFPGPQRITGILLG 108


>gi|322376137|ref|ZP_08050646.1| SP14.3 protein [Streptococcus sp. C300]
 gi|321278905|gb|EFX55949.1| SP14.3 protein [Streptococcus sp. C300]
          Length = 159

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 6/110 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  VI+PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP LD  
Sbjct: 11  VREVIEPVIQ-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPALDTI 68

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
             +     Y LE++SPG++RP+  K       G  +   +   + DKQK+
Sbjct: 69  KPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL-YQAIDKQKV 117


>gi|227510251|ref|ZP_03940300.1| protein of hypothetical function DUF150 [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227513180|ref|ZP_03943229.1| protein of hypothetical function DUF150 [Lactobacillus buchneri
           ATCC 11577]
 gi|227524395|ref|ZP_03954444.1| protein of hypothetical function DUF150 [Lactobacillus hilgardii
           ATCC 8290]
 gi|227083561|gb|EEI18873.1| protein of hypothetical function DUF150 [Lactobacillus buchneri
           ATCC 11577]
 gi|227088626|gb|EEI23938.1| protein of hypothetical function DUF150 [Lactobacillus hilgardii
           ATCC 8290]
 gi|227189903|gb|EEI69970.1| protein of hypothetical function DUF150 [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 157

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 68/133 (51%), Gaps = 4/133 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++P++++ +F    +  ++E K+  L++++++  G +T+ DC  +S  +S  LD  
Sbjct: 8   VKQVVKPILDKHTFYLFDVEFVKENKSWYLRVYIDKK-GGITIDDCVLVSDELSEKLDEM 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I   Y LEVSSPG +RP+    +  +  G  +   +  +   ++   G +   +  
Sbjct: 67  DPDPIPQQYFLEVSSPGAERPLRNDEELQQAVGEYIHISLYQNLNGQKAFEGFLRSVTSD 126

Query: 142 GFFLEKEKRGEKD 154
              L+ +K G+ D
Sbjct: 127 ELVLQNDKWGKND 139


>gi|157151233|ref|YP_001449858.1| hypothetical protein SGO_0542 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|259586201|sp|A8AVP8|RIMP_STRGC RecName: Full=Ribosome maturation factor rimP
 gi|157076027|gb|ABV10710.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 162

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +++VI+P I    F  V +   +   + +L +FV++ +G +T+ D  +L+  ISP+LD  
Sbjct: 14  VTAVIEPAIT-APFELVDVEYGKIGSDYVLSVFVDKPEG-ITVNDTADLTDIISPLLDTI 71

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LEV+SPG++RP+  K       G  +   +   S DKQK+  G ++   E
Sbjct: 72  KPDPFPEQYFLEVTSPGLERPLKTKEQVEAAVGQYIHVGL-YKSLDKQKVFEGTLLQFKE 130

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               LE   +  K     +I I +  +  ARL V
Sbjct: 131 DVLTLEYMDKTRKK----EIDIPYSLVSKARLAV 160


>gi|322378931|ref|ZP_08053345.1| hypothetical protein HSUHS1_0574 [Helicobacter suis HS1]
 gi|322379785|ref|ZP_08054082.1| hypothetical protein HSUHS5_0146 [Helicobacter suis HS5]
 gi|321147753|gb|EFX42356.1| hypothetical protein HSUHS5_0146 [Helicobacter suis HS5]
 gi|321148607|gb|EFX43093.1| hypothetical protein HSUHS1_0574 [Helicobacter suis HS1]
          Length = 152

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++++  ++ M      ++ L+E K  +L+I ++  +G  +L  CEE S  ISP+LDV
Sbjct: 6   ELENLLETTLKGMGCALYDVAFLKENKRDILRISIKALEGPTSLDICEEASLLISPLLDV 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
               +  Y LEVSS G++R + +   F    G +V C+ +
Sbjct: 66  HAPFKNAYTLEVSSMGLERSLSKLKHFKLSIGDLVECKTI 105


>gi|313889634|ref|ZP_07823277.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121931|gb|EFR45027.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 176

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 19/156 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--V 82
           +S VI+P  E +     ++      + LL I V+R+ G +T+ D  EL++ ISP+LD   
Sbjct: 32  VSPVIRPPFELVDVEYEKMG----SDYLLSILVDRE-GGITVEDTTELTEIISPLLDQIS 86

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM---GT 138
            +     Y LEVSSPG++RP+  K    +  G  V   +   + DK K+  G ++   G 
Sbjct: 87  PDPFPDQYMLEVSSPGLERPLKTKEAIEKAVGSYVNVSL-YKAIDKVKVFQGDLISFDGE 145

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +L+K +          +AI + ++  ARL V
Sbjct: 146 TLMIDYLDKTRHK-------VVAIPYQTVAKARLAV 174


>gi|317495159|ref|ZP_07953529.1| hypothetical protein HMPREF0432_00131 [Gemella moribillum M424]
 gi|316914581|gb|EFV36057.1| hypothetical protein HMPREF0432_00131 [Gemella moribillum M424]
          Length = 154

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
             L+I+ ++D G +TL DC  LS+ ++  LD E+ I   Y LEVSSPGI+R +    + +
Sbjct: 34  FFLRIYFDKD-GGLTLDDCVLLSEKLAEELDKEDFISDKYYLEVSSPGIERELRNLEEVI 92

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              G  V  +      ++++  G I+   +    +E + +     +     IS++ +   
Sbjct: 93  DSIGKHVYIKTYEKVDNQKEFYGDILDVEDKEITIEYKDKARVKKS----IISYEKIAKI 148

Query: 171 RLIV 174
           RL V
Sbjct: 149 RLAV 152


>gi|239815724|ref|YP_002944634.1| hypothetical protein Vapar_2746 [Variovorax paradoxus S110]
 gi|259645131|sp|C5CLW1|RIMP_VARPS RecName: Full=Ribosome maturation factor rimP
 gi|239802301|gb|ACS19368.1| protein of unknown function DUF150 [Variovorax paradoxus S110]
          Length = 212

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           +T+ DCE++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G V+  +I L
Sbjct: 54  VTVEDCEKVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRNEQDFERFVGEVI--DITL 109

Query: 124 SSGDKQKLIGKIMGT 138
            +       G++  T
Sbjct: 110 KAPMGAAAAGQVSAT 124


>gi|41409008|ref|NP_961844.1| hypothetical protein MAP2910c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|51316952|sp|Q73VV1|RIMP_MYCPA RecName: Full=Ribosome maturation factor rimP
 gi|41397367|gb|AAS05227.1| hypothetical protein MAP_2910c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 178

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 7/71 (9%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           LS++ S +LD  + IE HY LEVSSPG+DRP+     F R  G  V  ++VLS  D   +
Sbjct: 58  LSRSASALLDKLDTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKV--DVVLS--DNSTV 113

Query: 132 IGKIMGTSETG 142
            G++    ETG
Sbjct: 114 TGRV---GETG 121


>gi|15645660|ref|NP_207836.1| hypothetical protein HP1046 [Helicobacter pylori 26695]
 gi|6647978|sp|O25687|RIMP_HELPY RecName: Full=Ribosome maturation factor rimP
 gi|2314193|gb|AAD08091.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 146

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I  VIE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIGGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LDV + I+  Y LEVSS G++R +     F
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHF 90


>gi|261407940|ref|YP_003244181.1| hypothetical protein GYMC10_4147 [Paenibacillus sp. Y412MC10]
 gi|329929353|ref|ZP_08283106.1| hypothetical protein HMPREF9412_5355 [Paenibacillus sp. HGF5]
 gi|261284403|gb|ACX66374.1| protein of unknown function DUF150 [Paenibacillus sp. Y412MC10]
 gi|328936722|gb|EGG33165.1| hypothetical protein HMPREF9412_5355 [Paenibacillus sp. HGF5]
          Length = 153

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++QP ++E  F  V +  ++E  N  L++FV++D   + + DC  +S+ +S  LD  
Sbjct: 10  VEEMVQPYLDEHGFELVDVEYVKEGSNWFLRVFVDKDG-GIDIDDCGLISEHLSQKLDEN 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG +RP+ +K D  +  G  V   +       ++  GK+        
Sbjct: 69  DPIPTAYFLEVSSPGAERPLKKKEDVAKSVGKNVFVTVYEPINGLKEFEGKLESFDNEEL 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++  K+        Q  I +  + SARL +
Sbjct: 129 VIQTAKK--------QHVIPYAKVASARLAI 151


>gi|118464499|ref|YP_882873.1| hypothetical protein MAV_3696 [Mycobacterium avium 104]
 gi|166990891|sp|A0QIY5|RIMP_MYCA1 RecName: Full=Ribosome maturation factor rimP
 gi|118165786|gb|ABK66683.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 178

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 7/71 (9%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           LS++ S +LD  + IE HY LEVSSPG+DRP+     F R  G  V  ++VLS  D   +
Sbjct: 58  LSRSASALLDKLDTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKV--DVVLS--DNSTV 113

Query: 132 IGKIMGTSETG 142
            G++    ETG
Sbjct: 114 TGRV---GETG 121


>gi|315222141|ref|ZP_07864050.1| UPF0090 protein [Streptococcus anginosus F0211]
 gi|315188767|gb|EFU22473.1| UPF0090 protein [Streptococcus anginosus F0211]
          Length = 162

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++PVI+E  +  V I   +   + +L IFV++  G +T+ D  +L+  ISP+LD  
Sbjct: 14  VKEVVEPVIQE-PYELVNIEYGKMGSDHVLSIFVDKP-GGITVNDTADLTDIISPLLDTI 71

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LEV+SPG++RP+  K       G  +   +   + DK K+  G ++   E
Sbjct: 72  KPDPFPEQYFLEVTSPGLERPLKTKEQLAAAVGEYIHVSL-YQALDKSKVFEGTLLSFEE 130

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K +    + I +  +  ARL V
Sbjct: 131 DHLTMEYMDKTRKKV----VQIPYQLVSKARLAV 160


>gi|297565904|ref|YP_003684876.1| hypothetical protein Mesil_1476 [Meiothermus silvanus DSM 9946]
 gi|296850353|gb|ADH63368.1| protein of unknown function DUF150 [Meiothermus silvanus DSM 9946]
          Length = 143

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKN-LLLQIFVER-DDGNMTLRDCEELSQAISPILDVENI 85
           V Q ++  M +  +++SL    N  +L + +ER D+  +++ + E  S+ +   LD  ++
Sbjct: 3   VAQDLLGPMGYDVLEVSLKGSGNSRVLTVRLERKDEVPISVEELERASRVLGSELDRLDL 62

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE--TGF 143
           IE  YRLEV SPG DRP++    F R+ G  +  ++    G+     G+I G SE    F
Sbjct: 63  IESAYRLEVESPGPDRPLLTPRHFERFAG--LKAKVRSPEGN---FTGRIEGVSEDTVTF 117

Query: 144 FLEKEKR 150
            + KE R
Sbjct: 118 LVGKELR 124


>gi|322386002|ref|ZP_08059642.1| protein of hypothetical function DUF150 [Streptococcus cristatus
           ATCC 51100]
 gi|321269985|gb|EFX52905.1| protein of hypothetical function DUF150 [Streptococcus cristatus
           ATCC 51100]
          Length = 164

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  VI+P I+E  +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+LD  
Sbjct: 16  VREVIEPAIQE-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPLLDSI 73

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LEV+SPG++RP+  K       G  +   +   + DK K+  G ++G  +
Sbjct: 74  KPDPFPDQYFLEVTSPGLERPLKTKEAVAAAVGSYIHVSL-YKALDKNKVFEGTLLGFED 132

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K     ++ I ++ +  ARL V
Sbjct: 133 DVLLMEYMDKTRKK----EVEIPYNLVSKARLAV 162


>gi|317153846|ref|YP_004121894.1| hypothetical protein Daes_2142 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944097|gb|ADU63148.1| protein of unknown function DUF150 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 156

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 1/82 (1%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +++I+++  DG +T+  C ++S+ +S +L+VE+ I G Y LEVSSPG+DR     +    
Sbjct: 37  IIRIYIDGPDG-VTIDQCAKVSRQVSLLLEVEDTIPGAYILEVSSPGLDRRFFSTAQMAD 95

Query: 112 WNGHVVACEIVLSSGDKQKLIG 133
           + G  V   +  +   ++K+ G
Sbjct: 96  FVGKQVTALLYEARDGRRKVTG 117


>gi|317012240|gb|ADU82848.1| Ribosome maturation factor rimP [Helicobacter pylori Lithuania75]
          Length = 146

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I   I+ VIE + +    +SL++E +  +L++ ++  +G + L  C+++S+ ISP+LDV 
Sbjct: 5   IEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVNLDICQQVSEIISPLLDVC 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I+  Y LEVSS G++R +     F
Sbjct: 65  DFIQDAYILEVSSMGLERVLKTPKHF 90


>gi|118594130|ref|ZP_01551477.1| hypothetical protein MB2181_00640 [Methylophilales bacterium
           HTCC2181]
 gi|118439908|gb|EAV46535.1| hypothetical protein MB2181_00640 [Methylophilales bacterium
           HTCC2181]
          Length = 145

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 69/125 (55%), Gaps = 4/125 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +A D+ S I+ ++ ++ +  V + ++    LL ++F+++ +  +T+ DC  +S  ++  L
Sbjct: 1   MAFDVESFIEKMVTQLGYELVDLEIINHGQLL-RVFIDKPE-IVTIDDCVLVSNQLNHAL 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            VE   +   RLE+SSPG+DR + +  DF R++G  +  +      +++   G + G  +
Sbjct: 59  SVEEEFD-FGRLEISSPGVDRVIKKLEDFGRFDGEKIKIKTRSPISNRRNFSGVLRGI-K 116

Query: 141 TGFFL 145
            GF L
Sbjct: 117 AGFIL 121


>gi|302554521|ref|ZP_07306863.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302472139|gb|EFL35232.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 169

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 8/127 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           +  +L++ V+ D G   L    ++S+A+S  LD  + + EG Y LEV +PG +RP+    
Sbjct: 34  RKRVLRVVVDSDTG-ADLDRIADVSRALSAKLDETDAMGEGEYTLEVGTPGAERPLTEHR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
            ++R    +V  +  L+ GD  +L+ +I+   + G  ++ E  G K        I+FD +
Sbjct: 93  HYVRATDRLVKFQ--LAEGD--ELVARILKVDDEG--VDAEVPGVKGRKATARRIAFDDI 146

Query: 168 LSARLIV 174
           + AR+ V
Sbjct: 147 VRARVQV 153


>gi|121609703|ref|YP_997510.1| hypothetical protein Veis_2751 [Verminephrobacter eiseniae EF01-2]
 gi|121554343|gb|ABM58492.1| protein of unknown function DUF150 [Verminephrobacter eiseniae
           EF01-2]
          Length = 295

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 2/55 (3%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           ++TL DCE++++ +   L+V+ +   + RLEV+SPGIDRP+  + D LR+ G V+
Sbjct: 149 SVTLEDCEKVTRQLQFALEVDGVQ--YQRLEVASPGIDRPLRGEQDLLRFAGSVI 201


>gi|329767073|ref|ZP_08258601.1| hypothetical protein HMPREF0428_00298 [Gemella haemolysans M341]
 gi|328837798|gb|EGF87423.1| hypothetical protein HMPREF0428_00298 [Gemella haemolysans M341]
          Length = 154

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + ++     E   F    +  ++E     L+I+ ++D G ++L DC  LS+ ++
Sbjct: 1   MSIVEKVKTIATKQTENTEFSLYDVEYVKEGTEYFLRIYFDKD-GGLSLDDCVLLSEKLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPM 103
             LD E+ I   Y LEVSSPGI+R +
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERDL 85


>gi|324992029|gb|EGC23951.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK405]
 gi|324994122|gb|EGC26036.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK678]
 gi|325697659|gb|EGD39544.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK160]
 gi|327490546|gb|EGF22327.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1058]
          Length = 177

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGF---FLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DKQK+  G ++  +E      +L+K +R E       + I 
Sbjct: 113 QLADAVGSYIHVSL-YKAVDKQKVFEGTLLSFAEDVLHMEYLDKTRRKE-------VEIP 164

Query: 164 FDSLLSARLIV 174
           +  +  ARL V
Sbjct: 165 YSLVSKARLAV 175


>gi|332686769|ref|YP_004456543.1| clustered with transcription termination protein NusA
           [Melissococcus plutonius ATCC 35311]
 gi|332370778|dbj|BAK21734.1| clustered with transcription termination protein NusA
           [Melissococcus plutonius ATCC 35311]
          Length = 157

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ P++E+  F  + +  ++E K+  L++F+++  G + + +C  +S+ +S  LD  
Sbjct: 8   VTKLVTPILEKQQFELIDVEFIKEGKSWYLRVFIDKK-GGIDIEECAFVSEQLSEQLDSL 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             + I   Y LEVSSPG +RP+  + D+    G  +
Sbjct: 67  EPDPIPQAYFLEVSSPGAERPLKNEHDYFNAIGEYI 102


>gi|315648099|ref|ZP_07901200.1| hypothetical protein PVOR_22524 [Paenibacillus vortex V453]
 gi|315276745|gb|EFU40088.1| hypothetical protein PVOR_22524 [Paenibacillus vortex V453]
          Length = 153

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++QP + E  F  V +  ++E  N  L++FV++D   + + DC  +S+ +S  LD  
Sbjct: 10  VEEMVQPYLNEHGFELVDVEYVKEGSNWFLRVFVDKDG-GIDIDDCGLISEYLSQKLDEN 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG +RP+ +K D  +  G  V   +       ++  GK+        
Sbjct: 69  DPIPTAYFLEVSSPGAERPLKKKEDVAKSVGKNVFVTVYEPINGLKEFEGKLESFDNEEL 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++  K+        Q  I +  + SARL +
Sbjct: 129 VIQTVKK--------QYVIPYAKVASARLAI 151


>gi|302338536|ref|YP_003803742.1| protein of unknown function DUF150 [Spirochaeta smaragdinae DSM
           11293]
 gi|301635721|gb|ADK81148.1| protein of unknown function DUF150 [Spirochaeta smaragdinae DSM
           11293]
          Length = 175

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 82/156 (52%), Gaps = 20/156 (12%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISP--- 78
           G ++  ++P+IE + +++V+++  +  +   + + +   D  + L DCE++ +AI P   
Sbjct: 28  GPLTGELEPIIEGLGYKTVEVAAKKTGSRHHVSVIISGRDSGIGLTDCEKVHKAILPRLE 87

Query: 79  -ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD  +I      +EVSSPGI R +   ++F  + G +V    +L  G+ + ++G+IM 
Sbjct: 88  ILLDDRDIY-----VEVSSPGISRNLKCGAEFGIFVGSLVR---LLLEGENEWIVGRIME 139

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           + E    +E     ++D         +D++  A+L+
Sbjct: 140 SDERKVVIEMSDGKKEDY-------LYDTIRKAKLV 168


>gi|325686966|gb|EGD28990.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK72]
          Length = 177

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGF---FLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DKQK+  G ++   E      +L+K +R E       + I+
Sbjct: 113 QLADAVGSYIHVSL-YKAVDKQKVFEGTLLSFEEDVLHLEYLDKTRRKE-------VEIT 164

Query: 164 FDSLLSARLIV 174
           +  +  ARL V
Sbjct: 165 YSLVSKARLAV 175


>gi|154497679|ref|ZP_02036057.1| hypothetical protein BACCAP_01655 [Bacteroides capillosus ATCC
           29799]
 gi|150273177|gb|EDN00322.1| hypothetical protein BACCAP_01655 [Bacteroides capillosus ATCC
           29799]
          Length = 151

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++ QP+  E       +  + E     L+++++++ G + + DCE +S+ +S  LD  
Sbjct: 8   VRALAQPIAAENGCSIWDVEYVREAGTWFLRVYLDKE-GGVNIDDCEAVSRPLSDALDEA 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + IEG Y LEVSS GIDR +     F
Sbjct: 67  DPIEGSYTLEVSSAGIDRVLRHPEHF 92


>gi|42523052|ref|NP_968432.1| hypothetical protein Bd1545 [Bdellovibrio bacteriovorus HD100]
 gi|51316637|sp|Q6MMS8|RIMP_BDEBA RecName: Full=Ribosome maturation factor rimP
 gi|39575257|emb|CAE79425.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 174

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 9/100 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPI 79
           +A D+++    V+ ++ F  +       K   L++F++R++ G +++ DC  +S+ +S I
Sbjct: 14  IANDVAAAQGCVLYDIEFVGLG------KGRTLRLFIDREEEGAISIEDCTNVSRGLSEI 67

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           LD   E I  G Y LEVS+PG+DR + +   F +  G  V
Sbjct: 68  LDADEEMIPGGEYNLEVSTPGLDRHLKKPWHFKKAIGKKV 107


>gi|329769655|ref|ZP_08261059.1| hypothetical protein HMPREF0433_00823 [Gemella sanguinis M325]
 gi|328838410|gb|EGF88019.1| hypothetical protein HMPREF0433_00823 [Gemella sanguinis M325]
          Length = 154

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + S+    +++ ++    +  ++E  +  L+++ ++D G ++L DC  LS+ ++
Sbjct: 1   MSIVQKVKSIATEQVKDSNYSLYDVEYVKEGSDYFLRVYFDKD-GGLSLDDCVLLSERLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPM 103
             LD E+ I   Y LEVSSPGI+R +
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERDL 85


>gi|332362936|gb|EGJ40725.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK49]
          Length = 149

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 26  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 84

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGF---FLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DKQK+  G ++   E      +L+K +R E       + I 
Sbjct: 85  QLSNAVGSYIHVSL-YKAVDKQKVFEGTLLSFEEDVLHMEYLDKTRRKE-------VEIP 136

Query: 164 FDSLLSARLIV 174
           +  +  ARL V
Sbjct: 137 YSLVSKARLAV 147


>gi|288574933|ref|ZP_06393290.1| protein of unknown function DUF150 [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570674|gb|EFC92231.1| protein of unknown function DUF150 [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 181

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 2/56 (3%)

Query: 62  GNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           G +++RDCE +S+ I+  L+   E++++  Y LEVSSPG++RP+    DF R++G 
Sbjct: 44  GGISVRDCEIVSRRINNWLEESGEDLLDDRYYLEVSSPGLERPLFSLDDFRRFSGK 99


>gi|331002484|ref|ZP_08326002.1| hypothetical protein HMPREF0491_00864 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410300|gb|EGG89734.1| hypothetical protein HMPREF0491_00864 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 154

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%)

Query: 29  IQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ +  E+ F  V +  ++E     L+ + ++  G + + DC ++S+ +S  LD  + I+
Sbjct: 15  LEKLSSELDFEVVDVEFVKEAGEHYLRAYCDKT-GGIGIEDCADISRHLSDWLDENDFID 73

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             Y LEVSSPG+ R + +  DFLR  G  V
Sbjct: 74  EGYILEVSSPGLGRTLKKDKDFLRELGKEV 103


>gi|315928474|gb|EFV07784.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 114

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + L DC  LS+ +SPI DVE  + G Y LEVSS G++R + +   F +    +V     +
Sbjct: 45  VNLDDCARLSEILSPIFDVEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVK----I 100

Query: 124 SSGDKQK 130
           ++G+K+K
Sbjct: 101 TTGEKEK 107


>gi|319793510|ref|YP_004155150.1| hypothetical protein Varpa_2847 [Variovorax paradoxus EPS]
 gi|315595973|gb|ADU37039.1| protein of unknown function DUF150 [Variovorax paradoxus EPS]
          Length = 215

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 2/54 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +T+ DCE++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G V+
Sbjct: 54  VTVEDCEKVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRNEQDFERFVGSVI 105


>gi|160898429|ref|YP_001564011.1| hypothetical protein Daci_2988 [Delftia acidovorans SPH-1]
 gi|226703492|sp|A9C1Z0|RIMP_DELAS RecName: Full=Ribosome maturation factor rimP
 gi|160364013|gb|ABX35626.1| protein of unknown function DUF150 [Delftia acidovorans SPH-1]
          Length = 192

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +T+ DCE++++ +   L+V+     + RLEVSSPGIDRP+  + DF R+ G V+
Sbjct: 52  VTVEDCEKITRQLQFALEVDGA--DYTRLEVSSPGIDRPLRHEQDFTRFVGEVI 103


>gi|262282170|ref|ZP_06059939.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
 gi|262262624|gb|EEY81321.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
          Length = 162

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +++VI+P I    F  V +   +   + +L +FV++ +G +T+ D  +L+  ISP+LD  
Sbjct: 14  VTAVIEPAIT-APFELVDVEYGKIGSDYVLSVFVDKPEG-ITVNDTADLTDIISPLLDTI 71

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSE 140
             +     Y LEV+SPG++RP+  K       G  +   +   S DKQK+  G ++   E
Sbjct: 72  KPDPFPEQYFLEVTSPGLERPLKTKEQVEAAVGQYIHVGL-YKSLDKQKVFEGTLLQFKE 130

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +E   +  K     +I I +  +  ARL V
Sbjct: 131 DVLTIEYMDKTRKK----EIDIPYSLVSKARLAV 160


>gi|218960601|ref|YP_001740376.1| hypothetical protein CLOAM0262 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729258|emb|CAO80169.1| conserved hypothetical protein [Candidatus Cloacamonas
           acidaminovorans]
          Length = 156

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 5/77 (6%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G +TL +C   S A+   L++ ++I   Y LEVSSPG++RP+  KS ++      VA + 
Sbjct: 45  GGVTLDECAAFSNALGKELEIFDLIPERYFLEVSSPGLERPLKLKSHYVSAINEKVAVQ- 103

Query: 122 VLSSGDKQKLIGKIMGT 138
              +G+++K    IMGT
Sbjct: 104 -FQAGEERK---SIMGT 116


>gi|256827234|ref|YP_003151193.1| hypothetical protein Ccur_08070 [Cryptobacterium curtum DSM 15641]
 gi|256583377|gb|ACU94511.1| uncharacterized conserved protein [Cryptobacterium curtum DSM
           15641]
          Length = 177

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 28  VIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
            ++P   E     V I ++   K   +++F++  DG ++          I+ I+D  +  
Sbjct: 31  ALEPTAREKGIEIVSIEIVGSRKAPTIRVFIDTPDG-VSFDALASAQSWINEIMDAIDPF 89

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG--DKQKLIGKIMGTSETGFF 144
            G Y LEVSSPGIDRP+     F R++G     +IVL +    + K  G + G ++    
Sbjct: 90  PGAYMLEVSSPGIDRPLRTPEHFQRFSGQ--EAQIVLRAPIDGRSKFTGMLKGFADGAVL 147

Query: 145 L 145
           L
Sbjct: 148 L 148


>gi|307297717|ref|ZP_07577523.1| protein of unknown function DUF150 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916977|gb|EFN47359.1| protein of unknown function DUF150 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 177

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K  L++I +++ DG +++ DCE  S      LD  +++   Y L V SPG++R +    D
Sbjct: 58  KKRLVKITIDKLDGYVSISDCESFSADFGRALDSADLVPFSYDLVVESPGLERALRDLKD 117

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           ++R+ G      +         LIGKI+        +E  + G+      +IA  F ++ 
Sbjct: 118 YVRFTGEKAKVILKEPIEGVSVLIGKIISCENDVVTVESSENGK------EIAFHFSNVK 171

Query: 169 SARL 172
            A L
Sbjct: 172 RANL 175


>gi|327459331|gb|EGF05677.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1]
          Length = 177

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKSEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGF---FLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DKQK+  G ++   E      +L+K +R E       + I 
Sbjct: 113 QLADAVGSYINVSL-YKAVDKQKVFEGTLLSFEEDVLHMEYLDKTRRKE-------VEIP 164

Query: 164 FDSLLSARLIV 174
           +  +  ARL V
Sbjct: 165 YSLVSKARLAV 175


>gi|124515702|gb|EAY57211.1| conserved protein of unknown function [Leptospirillum rubarum]
          Length = 167

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 5/120 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + ++FV+   G + L   E +S+ IS +LDV +   G YRLEVSSPG+DR +    D L 
Sbjct: 30  VFKVFVDHPQG-VGLDQLEAVSRRISDLLDVLDPFPGKYRLEVSSPGLDRVLRIPEDLLL 88

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G  +  ++       Q++    +G+ E G  L     G+K   +L+ +I  D +   R
Sbjct: 89  HVGKHIKVKMK-EPFQGQRVFRGTIGSLEAGVLLISSVEGKK---QLKHSIPLDLVAEVR 144


>gi|327462401|gb|EGF08726.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1057]
          Length = 177

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGF---FLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DKQK+  G ++   E      +L+K +R E       + I 
Sbjct: 113 QLADAVGSYIHVSL-YKAVDKQKVFEGTLLSFEEEVLHMEYLDKTRRKE-------VEIP 164

Query: 164 FDSLLSARLIV 174
           +  +  ARL V
Sbjct: 165 YSLVSKARLAV 175


>gi|327467114|gb|EGF12624.1| hypothetical protein HMPREF9386_2224 [Streptococcus sanguinis
           SK330]
          Length = 177

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGF---FLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DKQK+  G ++   E      +L+K +R E       + I 
Sbjct: 113 QLADTVGSYIHVSL-YKAVDKQKVFEGTLLSFEEDVLHMEYLDKTRRKE-------VEIP 164

Query: 164 FDSLLSARLIV 174
           +  +  ARL V
Sbjct: 165 YSLVSKARLAV 175


>gi|125718694|ref|YP_001035827.1| hypothetical protein SSA_1901 [Streptococcus sanguinis SK36]
 gi|259595394|sp|A3CQ22|RIMP_STRSV RecName: Full=Ribosome maturation factor rimP
 gi|125498611|gb|ABN45277.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
 gi|325688732|gb|EGD30741.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK115]
 gi|332364629|gb|EGJ42398.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1059]
          Length = 177

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGF---FLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DKQK+  G ++   E      +L+K +R E       + I 
Sbjct: 113 QLADAVGSYIHVSL-YKAVDKQKVFEGTLLSFEEDVLHMEYLDKTRRKE-------VEIP 164

Query: 164 FDSLLSARLIV 174
           +  +  ARL V
Sbjct: 165 YSLVSKARLAV 175


>gi|329115931|ref|ZP_08244648.1| hypothetical protein SPB_1207 [Streptococcus parauberis NCFD 2020]
 gi|326906336|gb|EGE53250.1| hypothetical protein SPB_1207 [Streptococcus parauberis NCFD 2020]
          Length = 160

 Score = 47.8 bits (112), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I +++D G +T+ D   L++ ISP+LD    +     Y LEVSSPG++RP+    
Sbjct: 37  DYVLSILIDKD-GGITVEDTTALTEIISPVLDQITPDPFPEQYMLEVSSPGLERPLKTAE 95

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIM---GTSETGFFLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DK K+  G ++   G + T  +LEK ++         + I 
Sbjct: 96  SITNAVGSYINVSL-YKAIDKIKVFQGDLVAFDGQTLTINYLEKNRQK-------TVEIP 147

Query: 164 FDSLLSARLIV 174
           + S+  ARL V
Sbjct: 148 YQSVAKARLAV 158


>gi|320547938|ref|ZP_08042221.1| protein of hypothetical function DUF150 [Streptococcus equinus ATCC
           9812]
 gi|320447478|gb|EFW88238.1| protein of hypothetical function DUF150 [Streptococcus equinus ATCC
           9812]
          Length = 150

 Score = 47.8 bits (112), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 17/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ V+ P I+E  F  V +   +   + +L I +++  G +T+ D  +L++ ISP+LD  
Sbjct: 2   VTEVVAPAIKE-PFELVDVEYGKMGSDYVLSILIDKP-GGITVNDTADLTEIISPLLDAI 59

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM---G 137
             +     Y LEVSSPG++RP+  K    +  G  V   +   + DK K+  G ++   G
Sbjct: 60  KPDPFPEQYMLEVSSPGLERPLKTKEALEKAVGSYVNVSL-YKAIDKVKVFQGDLVAFDG 118

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            + T  +L+K ++         + I + ++  ARL V
Sbjct: 119 ETLTIDYLDKTRKK-------TVEIPYSTVAKARLAV 148


>gi|218296561|ref|ZP_03497289.1| protein of unknown function DUF150 [Thermus aquaticus Y51MC23]
 gi|218243103|gb|EED09635.1| protein of unknown function DUF150 [Thermus aquaticus Y51MC23]
          Length = 141

 Score = 47.8 bits (112), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +E +    +++   E    +L     +D+  +T+ D E  S+ I  +LD E
Sbjct: 2   DLWQLVEEAVEPLDLEVLEVK--EAPGEVLVRLERKDEKPITVADLERASRHIEAVLDRE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           + I G YRL V SPG  RP+  +  F R+ G
Sbjct: 60  DPIPGSYRLLVESPGPKRPLFTRRHFERFQG 90


>gi|257055489|ref|YP_003133321.1| hypothetical protein Svir_14540 [Saccharomonospora viridis DSM
           43017]
 gi|256585361|gb|ACU96494.1| uncharacterized conserved protein [Saccharomonospora viridis DSM
           43017]
          Length = 179

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV-ENIIEGHYRLEVSSPGIDRPMVRKS 107
           +  L+++ V+ D+G + L    E+S+A+S +LD  +++I G Y LEV+SPG+DRP+ +  
Sbjct: 34  RRKLVKVVVDGDEG-VELDKVAEISRAVSAVLDQHDHLIAGAYTLEVTSPGLDRPLTKPR 92

Query: 108 DFLRWNGHVV 117
            + R    +V
Sbjct: 93  HWRRSRNRLV 102


>gi|91788289|ref|YP_549241.1| hypothetical protein Bpro_2424 [Polaromonas sp. JS666]
 gi|123164890|sp|Q12AU9|RIMP_POLSJ RecName: Full=Ribosome maturation factor rimP
 gi|91697514|gb|ABE44343.1| protein of unknown function DUF150 [Polaromonas sp. JS666]
          Length = 200

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           DCE++++ +  +L+VE     + RLEVSSPGIDRP+  + DF R+ G +V
Sbjct: 49  DCEKVTRQLQFVLEVEGA--DYSRLEVSSPGIDRPLRNEKDFERFAGELV 96


>gi|21911035|ref|NP_665303.1| hypothetical protein SpyM3_1499 [Streptococcus pyogenes MGAS315]
 gi|34223120|sp|Q8K642|RIMP_STRP3 RecName: Full=Ribosome maturation factor rimP
 gi|21905244|gb|AAM80106.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
          Length = 178

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 4/64 (6%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I V+++DG +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+ + +
Sbjct: 55  DYILSILVDKEDG-ITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPL-KTA 112

Query: 108 DFLR 111
           D L+
Sbjct: 113 DSLK 116


>gi|308176798|ref|YP_003916204.1| hypothetical protein AARI_10150 [Arthrobacter arilaitensis Re117]
 gi|307744261|emb|CBT75233.1| conserved hypothetical protein [Arthrobacter arilaitensis Re117]
          Length = 188

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 18/130 (13%)

Query: 32  VIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELSQAISPILDVENIIE-- 87
           ++EE+S R         K +++QI V++ DG+  + L +  E++  IS  LD + +    
Sbjct: 29  LLEEVSLRP------SGKQMIVQIIVDKADGHESLNLDELGEVTTTISNALDKDAVYASA 82

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL-- 145
             Y LEVSSPG+ RP+  +  ++R    +V     +S  D  KL G+++  +++   +  
Sbjct: 83  APYELEVSSPGLSRPLTAQRHWIRAINRMVK----ISLADGTKLRGRLLEVNDSDVLVAE 138

Query: 146 --EKEKRGEK 153
             E  K+G K
Sbjct: 139 HREPAKKGMK 148


>gi|225874865|ref|YP_002756324.1| hypothetical protein ACP_3325 [Acidobacterium capsulatum ATCC
           51196]
 gi|259585657|sp|C1F695|RIMP_ACIC5 RecName: Full=Ribosome maturation factor rimP
 gi|225792684|gb|ACO32774.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 201

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 64  MTLRDCEELSQAISPILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           +T  DC   S     +LDVE ++ G   Y LEVSSPG+DR +  ++D+ R+ G +V    
Sbjct: 81  VTHEDCSAFSTDFGTLLDVEELMPGASEYTLEVSSPGLDRKLQSRADYERFAGSLVKLST 140

Query: 122 VLSSGDKQKLIGKIMG 137
                  +   G++ G
Sbjct: 141 FEPVNGNRHWQGRMAG 156


>gi|208434347|ref|YP_002266013.1| hypothetical protein HPG27_382 [Helicobacter pylori G27]
 gi|208432276|gb|ACI27147.1| hypothetical protein HPG27_382 [Helicobacter pylori G27]
          Length = 135

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 51/79 (64%), Gaps = 1/79 (1%)

Query: 32  VIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           +IE + +    +SL++E +  +L++ ++  +G ++L  C+++S+ ISP+LDV + I+  Y
Sbjct: 1   MIESLGYLLYDVSLVKENEQHILRVSLKNPNGAVSLDICQQVSEIISPLLDVCDFIQDAY 60

Query: 91  RLEVSSPGIDRPMVRKSDF 109
            LEVSS G++R +     F
Sbjct: 61  ILEVSSMGLERTLKTPKHF 79


>gi|295098917|emb|CBK88006.1| Uncharacterized protein conserved in bacteria [Eubacterium
           cylindroides T2-87]
          Length = 154

 Score = 47.8 bits (112), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           I+PV+ E       I  L  +N  +LQI VE+ DG M L  C   S  I  +LD ++   
Sbjct: 10  IEPVLNEKDCVLYDIEWLTNQNPPILQISVEKQDGTMDLDTCAMCSDVIGTLLDNKDWYT 69

Query: 88  GHYRLEVSSPGIDRPM 103
             Y LEV SPG +R +
Sbjct: 70  KEYMLEVCSPGAEREL 85


>gi|306832817|ref|ZP_07465952.1| protein of hypothetical function DUF150 [Streptococcus bovis ATCC
           700338]
 gi|304425052|gb|EFM28183.1| protein of hypothetical function DUF150 [Streptococcus bovis ATCC
           700338]
          Length = 146

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I +++ +G +T+ D  EL++ ISP+LD    +     Y LEVSSPG++RP+  K 
Sbjct: 23  DYVLSILIDKPEG-ITVDDTAELTEIISPLLDAIKPDPFPEQYMLEVSSPGLERPLKTKE 81

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIM---GTSETGFFLEKEKRGEKDMNELQIAIS 163
              +  G  V   +   + DK K+  G ++   G + T  +L+K ++         + I 
Sbjct: 82  ALEKAVGSYVNVSL-YKAIDKVKVFQGDLVAFDGDTLTIDYLDKTRKK-------TVEIP 133

Query: 164 FDSLLSARLIV 174
           + ++  ARL V
Sbjct: 134 YSTVAKARLAV 144


>gi|259046784|ref|ZP_05737185.1| BCR/YhbC family protein [Granulicatella adiacens ATCC 49175]
 gi|259036552|gb|EEW37807.1| BCR/YhbC family protein [Granulicatella adiacens ATCC 49175]
          Length = 167

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ + + VI++  F    +  ++E KN  L+ ++++  G + L DC  +S+  S ILD +
Sbjct: 18  VTELTRDVIQKEGFELFDLEFVKEGKNWFLRFYLDKP-GGIDLDDCAFMSEKFSEILDAQ 76

Query: 84  N--IIEGHYRLEVSSPGIDRPM 103
           N   I   Y LEVSSPG +RP+
Sbjct: 77  NPDPIPQAYFLEVSSPGAERPL 98


>gi|28895280|ref|NP_801630.1| hypothetical protein SPs0368 [Streptococcus pyogenes SSI-1]
 gi|28810526|dbj|BAC63463.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 127

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 4/64 (6%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I V+++DG +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+ + +
Sbjct: 4   DYILSILVDKEDG-ITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPL-KTA 61

Query: 108 DFLR 111
           D L+
Sbjct: 62  DSLK 65


>gi|324991724|gb|EGC23656.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK353]
          Length = 177

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 9/128 (7%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
                 G  +   +   + DKQK+  G ++   E    +E   +  K   E++I  S  S
Sbjct: 113 QLADAVGSYIHVSL-YKAVDKQKVFEGTLLSFEEDVLHMEYLDKTRK--KEVEIPYSLVS 169

Query: 167 LLSARLIV 174
              ARL V
Sbjct: 170 --KARLAV 175


>gi|189485236|ref|YP_001956177.1| hypothetical protein TGRD_233 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|259645130|sp|B1GZN4|RIMP_UNCTG RecName: Full=Ribosome maturation factor rimP
 gi|170287195|dbj|BAG13716.1| conserved hypothetical protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 151

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 4/121 (3%)

Query: 19  MGLAGDISSVIQPVI--EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
           M    +I  ++ PV   E++    VQ S  +  + + +IF+++D G +T+ DCE +S   
Sbjct: 1   MRKVQEIEDLLAPVAAREKIEIVDVQYSK-KAGDWVARIFIDKDSG-VTISDCENISCIF 58

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              LD  +I++  Y LE+SSPG  R +  +  F R+ G            +++  +G ++
Sbjct: 59  GAFLDESDILKDSYVLEISSPGFKRVLKSEKSFRRFIGSKTRIRTFKPINNQRNFLGTLL 118

Query: 137 G 137
            
Sbjct: 119 N 119


>gi|325695171|gb|EGD37072.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK150]
 gi|328944977|gb|EGG39134.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1087]
 gi|332358011|gb|EGJ35844.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1056]
          Length = 177

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGF---FLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DKQK+  G ++   E      +L+K +R E       + I 
Sbjct: 113 QLSDAVGSYIHVSL-YKAVDKQKVFEGTLLSFEEDVLHMEYLDKTRRKE-------VEIP 164

Query: 164 FDSLLSARLIV 174
           +  +  ARL V
Sbjct: 165 YSLVSKARLAV 175


>gi|259586215|sp|Q2S1N5|RIMP_SALRD RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ I  +LDVE++++G Y+LE+SSPGI RP+   + + +  G  +      S GD++ +
Sbjct: 59  ISKEIGFLLDVEDVVDGSYKLELSSPGIKRPLTMPAQYRKNVGRTLRVRFE-SDGDEEIV 117

Query: 132 IGKIMGTSETGFFLE 146
           +G +    +    LE
Sbjct: 118 VGDLTDADDEEIELE 132


>gi|32266338|ref|NP_860370.1| hypothetical protein HH0839 [Helicobacter hepaticus ATCC 51449]
 gi|34222773|sp|P59821|RIMP_HELHP RecName: Full=Ribosome maturation factor rimP
 gi|32262388|gb|AAP77436.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 157

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 40/59 (67%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           ++L+DC+ +S+ ISP+LDVE+     Y LEVSSPG++R + +   ++   G  V+ +++
Sbjct: 56  VSLQDCQNVSELISPLLDVEDENLKDYNLEVSSPGLERVLKKPQHYIYSLGEKVSIKLM 114


>gi|223984471|ref|ZP_03634604.1| hypothetical protein HOLDEFILI_01898 [Holdemania filiformis DSM
           12042]
 gi|223963542|gb|EEF67921.1| hypothetical protein HOLDEFILI_01898 [Holdemania filiformis DSM
           12042]
          Length = 156

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I ++I PV++ +  +   +  + E+K+ +LQI V R DG+M +  C  +S+ IS  LD 
Sbjct: 6   NIKTLILPVLDSLGIQLYDLKWVNEKKSRILQIAVMRADGSMDIDTCALVSEKISEALDA 65

Query: 83  -ENIIEGHYRLEVSSPGIDRPM 103
            ++ I   Y LEV SPG +R +
Sbjct: 66  HDDWISFEYFLEVCSPGAEREL 87


>gi|332522698|ref|ZP_08398950.1| hypothetical protein STRPO_1027 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313962|gb|EGJ26947.1| hypothetical protein STRPO_1027 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 176

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 21/159 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           ++  + PVI+   F  V +    EK   + +L I V+++ G +T+ D  EL++ ISP+LD
Sbjct: 28  VTETVSPVIKS-PFELVDVEY--EKMGSDYILSILVDKE-GGITVEDTTELTEIISPLLD 83

Query: 82  --VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM-- 136
               +     Y LEVSSPG++RP+  K    +  G  V   +   + DK K+  G ++  
Sbjct: 84  QISPDPFPDQYMLEVSSPGLERPLKTKEAIEKAVGSYVNVSL-YKAIDKVKVFQGDLISF 142

Query: 137 -GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + T  +L+K +    D       I + ++  ARL V
Sbjct: 143 DGKTLTIDYLDKTRHKVVD-------IPYQTVAKARLAV 174


>gi|259585710|sp|A1W8Z6|RIMP_ACISJ RecName: Full=Ribosome maturation factor rimP
          Length = 197

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 2/54 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +T+ DCE++++ +   L+VE +   + RLEVSSPGIDR +  ++DF R+ G V+
Sbjct: 54  ITVEDCEKVTRQLQFALEVEGV--DYTRLEVSSPGIDRLLRNEADFKRFEGEVI 105


>gi|222110448|ref|YP_002552712.1| hypothetical protein Dtpsy_1245 [Acidovorax ebreus TPSY]
 gi|254800004|sp|B9MGN9|RIMP_DIAST RecName: Full=Ribosome maturation factor rimP
 gi|221729892|gb|ACM32712.1| protein of unknown function DUF150 [Acidovorax ebreus TPSY]
          Length = 197

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 2/54 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +T+ DCE++++ +   L+VE +   + RLEVSSPGIDR +  ++DF R+ G V+
Sbjct: 54  ITVEDCEKVTRQLQFALEVEGV--DYTRLEVSSPGIDRLLRNEADFKRFEGEVI 105


>gi|228476573|ref|ZP_04061255.1| conserved hypothetical protein [Streptococcus salivarius SK126]
 gi|228251768|gb|EEK10833.1| conserved hypothetical protein [Streptococcus salivarius SK126]
          Length = 157

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 21/159 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +++V+ P I E  +  V I    EK   + +L + +++  G +T+ D  +L++ ISP+LD
Sbjct: 9   VTAVVAPAIPE-PYELVDIEY--EKLGGDYVLSVLIDKP-GGITVEDTADLTEIISPLLD 64

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM-- 136
               +     Y LEVSSPG++RP+  K       G  +   +   + DK K+  G ++  
Sbjct: 65  TIQPDPFPDQYMLEVSSPGLERPLKTKEALTNAVGQYINVSL-YKAIDKIKIFQGDLVAF 123

Query: 137 -GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + T  +L+K +          + I + ++  ARL V
Sbjct: 124 DGETLTIDYLDKTRHK-------TVEIPYQTVAKARLAV 155


>gi|119963357|ref|YP_947325.1| uncharacterized Bcr YhbC family protein [Arthrobacter aurescens
           TC1]
 gi|259585697|sp|A1R513|RIMP_ARTAT RecName: Full=Ribosome maturation factor rimP
 gi|119950216|gb|ABM09127.1| putative Uncharacterized BCR YhbC family protein [Arthrobacter
           aurescens TC1]
          Length = 203

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           G ++L    ++S+ +S ILD +   +G  Y LEVSSPG+ RP+     + R  G +V   
Sbjct: 70  GGVSLDAIADVSRGLSDILDNDPHDDGRPYDLEVSSPGVSRPLTEPRHWHRARGRMVRVN 129

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ---IAISFDSLLSARL 172
           ++   GD   L+G+I    +    L  E   +K M   Q   I I FD +   ++
Sbjct: 130 VI--QGD--NLLGRIASVGDDAVTLIPEHEVKKGMKPKQGEPITIPFDRIRQGKV 180


>gi|28378677|ref|NP_785569.1| hypothetical protein lp_2044 [Lactobacillus plantarum WCFS1]
 gi|254556875|ref|YP_003063292.1| hypothetical protein JDM1_1708 [Lactobacillus plantarum JDM1]
 gi|300768188|ref|ZP_07078093.1| protein of hypothetical function DUF150 [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308180816|ref|YP_003924944.1| hypothetical protein LPST_C1634 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|34223110|sp|Q88VK3|RIMP_LACPL RecName: Full=Ribosome maturation factor rimP
 gi|28271513|emb|CAD64418.1| unknown [Lactobacillus plantarum WCFS1]
 gi|254045802|gb|ACT62595.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
 gi|300494252|gb|EFK29415.1| protein of hypothetical function DUF150 [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308046307|gb|ADN98850.1| hypothetical protein LPST_C1634 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 158

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 23/157 (14%)

Query: 21  LAGDISSVIQPV----IEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQA 75
           ++ ++   IQPV    +    F  V +  + E ++  L++++++  G + + +C  +S  
Sbjct: 1   MSSNVVETIQPVAAAIVSAHQFELVDLEFVREGQSWYLRLYIDKP-GGINIEECAMVSDE 59

Query: 76  ISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +S  LD    + I   Y LEVSSPG +RP+ +++DF    G  V        G  QKL G
Sbjct: 60  LSEKLDAMEPDPIPQAYFLEVSSPGAERPLKKEADFQNAIGKYVHV------GLYQKLDG 113

Query: 134 K---------IMGTSETGFFLEKEKRGEKDMNELQIA 161
           K         +  T+ T  +L+K +     +N  QI+
Sbjct: 114 KKIFEGDLTAVTPTTLTIDYLDKTRHKTVTINREQIS 150


>gi|206602207|gb|EDZ38689.1| Conserved protein of unknown function [Leptospirillum sp. Group II
           '5-way CG']
          Length = 167

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           + ++FV+   G + L   E +S+ IS +LDV +   G YRLEVSSPG+DR +    D L 
Sbjct: 30  VFKVFVDHPKG-VGLDQLEAVSRRISDLLDVLDPFPGKYRLEVSSPGLDRVLRIPEDLLL 88

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             G  +  +        Q++    +G+ E G  L     G+K   +L+ +I  D +   R
Sbjct: 89  HVGKHIKVK-TKEPLQGQRVFRGTIGSLEAGVLLISSVEGKK---QLKHSIPLDLVAEVR 144


>gi|326382938|ref|ZP_08204628.1| ribosome maturation protein RimP [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198528|gb|EGD55712.1| ribosome maturation protein RimP [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 181

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 3/103 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISP 78
            L GDI  V+   + E  +   ++++L       ++I V+RD G  +L    +LS+A+  
Sbjct: 5   ALTGDIGDVLTAPLAEHGYDLEEVAILTPPGRREIRIVVDRD-GGASLDALADLSRALES 63

Query: 79  ILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +LD  +++ E  Y LE+++PGI RP+     + R  G  V  E
Sbjct: 64  VLDDSDLLGESPYDLELTTPGIGRPLTLPRHWRRSQGRKVTAE 106


>gi|149925032|ref|ZP_01913350.1| hypothetical protein PPSIR1_10025 [Plesiocystis pacifica SIR-1]
 gi|149814096|gb|EDM73722.1| hypothetical protein PPSIR1_10025 [Plesiocystis pacifica SIR-1]
          Length = 174

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 20/146 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-- 81
           + + I+PV  +M + ++ I      +  +L++F++   G +T+ DC  + + I   LD  
Sbjct: 1   MEAAIEPVCADMGYEALLIEWSGSGQRRVLRVFLDSPKG-VTIADCTRMGRLIGNSLDAA 59

Query: 82  ------------VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI----VLSS 125
                       +  ++   Y LEVSSPG+DRP+ +K  F    G  V  +       + 
Sbjct: 60  EAAVEAGEGNPALAALLAPGYTLEVSSPGVDRPLAKKRHFTAQVGGRVKLKTWESPAAAD 119

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRG 151
            D++   G+++   +     E ++RG
Sbjct: 120 ADERSFNGRLVAVHDDDAAPEDQRRG 145


>gi|322373935|ref|ZP_08048470.1| SP14.3 protein [Streptococcus sp. C150]
 gi|321277307|gb|EFX54377.1| SP14.3 protein [Streptococcus sp. C150]
          Length = 157

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 21/159 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +++V+ P I E  +  V I    EK   + +L + +++  G +T+ D  +L++ ISP+LD
Sbjct: 9   VTAVVAPAIPE-PYELVDIEY--EKLGSDYVLSVLIDKP-GGITVEDTADLTEIISPLLD 64

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM-- 136
               +     Y LEVSSPG++RP+  K       G  +   +   + DK K+  G ++  
Sbjct: 65  TIQPDPFPDQYMLEVSSPGLERPLKTKEALTNAVGQYINVSL-YKAIDKIKIFQGDLVAF 123

Query: 137 -GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + T  +L+K +          + I + ++  ARL V
Sbjct: 124 DGETLTIDYLDKTRHK-------TVEIPYQTVAKARLAV 155


>gi|319762632|ref|YP_004126569.1| hypothetical protein Alide_1938 [Alicycliphilus denitrificans BC]
 gi|330824722|ref|YP_004388025.1| ribosome maturation factor rimP [Alicycliphilus denitrificans K601]
 gi|317117193|gb|ADU99681.1| protein of unknown function DUF150 [Alicycliphilus denitrificans
           BC]
 gi|329310094|gb|AEB84509.1| Ribosome maturation factor rimP [Alicycliphilus denitrificans K601]
          Length = 196

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +T+ DCE++++ +   L+VE +   + RLEVSSPGIDR +  + DF R+ G V+
Sbjct: 53  VTVEDCEKVTRQLQFALEVEGV--DYKRLEVSSPGIDRLLRNEQDFTRFEGEVI 104


>gi|291519297|emb|CBK74518.1| Uncharacterized protein conserved in bacteria [Butyrivibrio
           fibrisolvens 16/4]
          Length = 100

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 15/107 (14%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTL 66
           H+ YE R             +I P+++E+ F    +  ++E  +  L+ +++++ G +T+
Sbjct: 4   HTDYEKRT----------EELITPILDELGFELYDVEYVKEGADYYLRAYIDKE-GGITI 52

Query: 67  RDCEELSQAISPILDVENIIEGH--YRLEVSSPGIDRPMVRKSDFLR 111
            DC ++S  ++ +LD E  I G   Y  EVSSPG+ R +++K+  L+
Sbjct: 53  DDCVDVSHRMNELLDAEPQIGGDEGYIFEVSSPGLGR-ILKKTSILK 98


>gi|206895232|ref|YP_002247277.1| protein of unknown function, putative [Coprothermobacter
           proteolyticus DSM 5265]
 gi|259585743|sp|B5Y930|RIMP_COPPD RecName: Full=Ribosome maturation factor rimP
 gi|206737849|gb|ACI16927.1| protein of unknown function, putative [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 169

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 9/151 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+   I  ++    F  + +    EK   +   V   + ++T+ DCE+L++AI P+L+ 
Sbjct: 8   ADLEERISKIVVSKGFYFIDLEERMEKGAHIISVVVHGEPSVTIGDCEKLTRAILPLLES 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
                 +  LEV+SPG+DR + R+ ++  + G V+        G  Q +  K++G     
Sbjct: 68  FPWYGDNDHLEVTSPGLDRVLKREWEYEIFKGRVIDISFD-RDGKSQTIRAKLVGRENEN 126

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +E E             I FD +  A+L+
Sbjct: 127 VVIEYEGN--------YFRIPFDQVRKAKLV 149


>gi|291276415|ref|YP_003516187.1| hypothetical protein HMU01790 [Helicobacter mustelae 12198]
 gi|290963609|emb|CBG39441.1| Putative hypothetical protein [Helicobacter mustelae 12198]
          Length = 147

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           ++ ++   I+ +I+ + +    I  L+E ++ +L+I +   D  +TL  C+ +S+A+SP+
Sbjct: 2   ISQELQERIENLIQSLGYTLYDIVFLKENQSDILRISITHADQPITLDACQMVSEALSPL 61

Query: 80  LDVENIIEGHYRLEVSSPGIDR 101
           LDV    +  Y LEVSSPG++R
Sbjct: 62  LDVALSDQKSYFLEVSSPGVER 83


>gi|332366409|gb|EGJ44160.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK355]
          Length = 177

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 13/126 (10%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIMGTSETGF---FLEKEKRGEKDM-----NEL 158
                 G  +   +   + DKQK+  G ++   E      +L+K +R E ++     ++ 
Sbjct: 113 QLADAVGSYIHVSL-YKAVDKQKVFEGTLLSFEEDVLRMEYLDKTRRKEVEILYSLVSKA 171

Query: 159 QIAISF 164
           ++A+ F
Sbjct: 172 RLAVKF 177


>gi|46198658|ref|YP_004325.1| putative cytoplasmic protein [Thermus thermophilus HB27]
 gi|55980671|ref|YP_143968.1| hypothetical protein TTHA0702 [Thermus thermophilus HB8]
 gi|51316688|sp|Q72KG3|RIMP_THET2 RecName: Full=Ribosome maturation factor rimP
 gi|62299029|sp|Q56425|RIMP_THET8 RecName: Full=Ribosome maturation factor rimP
 gi|46196281|gb|AAS80698.1| hypothetical cytosolic protein [Thermus thermophilus HB27]
 gi|55772084|dbj|BAD70525.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 157

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query: 59  RDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           +D+  +T+ D EE S+ I   LD E+ I G YRL V SPG  RP+  +  F R+ G
Sbjct: 51  KDERPITVADLEEASRHIEAALDREDPIPGSYRLLVESPGPKRPLFTRRHFERFQG 106


>gi|312862565|ref|ZP_07722807.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
 gi|322517415|ref|ZP_08070288.1| protein of hypothetical function DUF150 [Streptococcus vestibularis
           ATCC 49124]
 gi|311101970|gb|EFQ60171.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
 gi|322123897|gb|EFX95456.1| protein of hypothetical function DUF150 [Streptococcus vestibularis
           ATCC 49124]
          Length = 157

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 21/159 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +++V+ P I E  +  V I    EK   + +L + +++  G +T+ D  +L++ ISP+LD
Sbjct: 9   VTAVVAPAIPE-PYELVDIEY--EKIGSDYILSVLIDKP-GGITVEDTADLTEIISPLLD 64

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM-- 136
               +     Y LEVSSPG++RP+  K       G  +   +   + DK K+  G ++  
Sbjct: 65  TIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSL-YKAIDKIKIFQGDLLTF 123

Query: 137 -GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + T  +L+K +          + I + ++  ARL V
Sbjct: 124 DGETLTIDYLDKTRHK-------TVEIPYQTVAKARLAV 155


>gi|294507806|ref|YP_003571864.1| hypothetical protein SRM_01991 [Salinibacter ruber M8]
 gi|294344134|emb|CBH24912.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 160

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           D   +S+ +  +LDVE++++G Y+LE+SSPGI RP+   + + +  G  +      S GD
Sbjct: 60  DLALISKEVGFLLDVEDVVDGSYKLELSSPGIKRPLTMPAQYRKNVGRTLRVRFE-SDGD 118

Query: 128 KQKLIGKIMGTSETGFFLE 146
           ++ ++G +    +    LE
Sbjct: 119 EEIVVGDLTDADDEEIELE 137


>gi|121594901|ref|YP_986797.1| hypothetical protein Ajs_2563 [Acidovorax sp. JS42]
 gi|120606981|gb|ABM42721.1| protein of unknown function DUF150 [Acidovorax sp. JS42]
          Length = 219

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 2/54 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +T+ DCE++++ +   L+VE +   + RLEVSSPGIDR +  ++DF R+ G V+
Sbjct: 76  ITVEDCEKVTRQLQFALEVEGV--DYTRLEVSSPGIDRLLRNEADFKRFEGEVI 127


>gi|121604914|ref|YP_982243.1| hypothetical protein Pnap_2013 [Polaromonas naphthalenivorans CJ2]
 gi|226701127|sp|A1VNU4|RIMP_POLNA RecName: Full=Ribosome maturation factor rimP
 gi|120593883|gb|ABM37322.1| protein of unknown function DUF150 [Polaromonas naphthalenivorans
           CJ2]
          Length = 202

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 2/50 (4%)

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           DCE++++ +  +L+VE     + RLEVSSPGIDRP+  + DF R+ G ++
Sbjct: 53  DCEKVTRQLQFVLEVEGA--EYSRLEVSSPGIDRPLRSEKDFERFAGELI 100


>gi|296129354|ref|YP_003636604.1| protein of unknown function DUF150 [Cellulomonas flavigena DSM
           20109]
 gi|296021169|gb|ADG74405.1| protein of unknown function DUF150 [Cellulomonas flavigena DSM
           20109]
          Length = 186

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 56  FVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
             + D G + L    ++++A+S  LD  +++ G Y LEV SPG +RP+     + R  G 
Sbjct: 45  LADDDPGTLDLDRVGDVTRAVSDALDAADVLPGAYTLEVGSPGAERPLTLARHWRRARGR 104

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETG------FFLEKEKRGEKDMNELQIAISFDSLLS 169
            V    ++   D   L G++ G ++          +    +G + +    + +++D +  
Sbjct: 105 TV----LVRRTDGTTLTGRLDGVADGDAPELVVVPVTDPGKGRRPVVGAPVTLAWDDVRD 160

Query: 170 ARLIV 174
           AR+ V
Sbjct: 161 ARVQV 165


>gi|326333614|ref|ZP_08199852.1| hypothetical protein NBCG_05048 [Nocardioidaceae bacterium Broad-1]
 gi|325948595|gb|EGD40697.1| hypothetical protein NBCG_05048 [Nocardioidaceae bacterium Broad-1]
          Length = 166

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           K  +L+I V++D G +T  +  E ++ ++ +LD  +++ E  Y LEV+SPG+DRP+    
Sbjct: 44  KRRILRIAVDKD-GGITHEEVTEATREVNRVLDESDVMGEQPYTLEVTSPGVDRPLTLPR 102

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            + R  G +V     +++ D     G++  + E    LE
Sbjct: 103 HWRRNKGRLVK----VTATDGSTFTGRVKESDEDRVSLE 137


>gi|306968906|ref|ZP_07481567.1| hypothetical protein TMIG_02342 [Mycobacterium tuberculosis
           SUMu009]
 gi|308353519|gb|EFP42370.1| hypothetical protein TMIG_02342 [Mycobacterium tuberculosis
           SUMu009]
          Length = 183

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 4/56 (7%)

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LD  N I G Y LEVSSPG++RP+  +  F R  G  V  E+VLS G   +L G++
Sbjct: 69  LDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKV--ELVLSDG--SRLTGRV 120


>gi|15609979|ref|NP_217358.1| hypothetical protein Rv2842c [Mycobacterium tuberculosis H37Rv]
 gi|15842383|ref|NP_337420.1| hypothetical protein MT2908 [Mycobacterium tuberculosis CDC1551]
 gi|31794019|ref|NP_856512.1| hypothetical protein Mb2867c [Mycobacterium bovis AF2122/97]
 gi|121638722|ref|YP_978946.1| hypothetical protein BCG_2862c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662683|ref|YP_001284206.1| hypothetical protein MRA_2865 [Mycobacterium tuberculosis H37Ra]
 gi|148824032|ref|YP_001288786.1| hypothetical protein TBFG_12857 [Mycobacterium tuberculosis F11]
 gi|167967195|ref|ZP_02549472.1| hypothetical protein MtubH3_03787 [Mycobacterium tuberculosis
           H37Ra]
 gi|215404814|ref|ZP_03416995.1| hypothetical protein Mtub0_14218 [Mycobacterium tuberculosis
           02_1987]
 gi|215412674|ref|ZP_03421392.1| hypothetical protein Mtub9_14980 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428281|ref|ZP_03426200.1| hypothetical protein MtubT9_18553 [Mycobacterium tuberculosis T92]
 gi|215431784|ref|ZP_03429703.1| hypothetical protein MtubE_14186 [Mycobacterium tuberculosis
           EAS054]
 gi|215447096|ref|ZP_03433848.1| hypothetical protein MtubT_14592 [Mycobacterium tuberculosis T85]
 gi|218754590|ref|ZP_03533386.1| hypothetical protein MtubG1_14629 [Mycobacterium tuberculosis GM
           1503]
 gi|219558859|ref|ZP_03537935.1| hypothetical protein MtubT1_16742 [Mycobacterium tuberculosis T17]
 gi|224991214|ref|YP_002645903.1| hypothetical protein JTY_2857 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798072|ref|YP_003031073.1| hypothetical protein TBMG_01130 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232937|ref|ZP_04926264.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254365488|ref|ZP_04981533.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551906|ref|ZP_05142353.1| hypothetical protein Mtube_15842 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260187858|ref|ZP_05765332.1| hypothetical protein MtubCP_17794 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260201973|ref|ZP_05769464.1| hypothetical protein MtubT4_18245 [Mycobacterium tuberculosis T46]
 gi|260206153|ref|ZP_05773644.1| hypothetical protein MtubK8_17835 [Mycobacterium tuberculosis K85]
 gi|289444393|ref|ZP_06434137.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448504|ref|ZP_06438248.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553370|ref|ZP_06442580.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289571030|ref|ZP_06451257.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575543|ref|ZP_06455770.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746640|ref|ZP_06506018.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751503|ref|ZP_06510881.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754950|ref|ZP_06514328.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758962|ref|ZP_06518340.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763018|ref|ZP_06522396.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|294994067|ref|ZP_06799758.1| hypothetical protein Mtub2_06033 [Mycobacterium tuberculosis 210]
 gi|297635455|ref|ZP_06953235.1| hypothetical protein MtubK4_15097 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732454|ref|ZP_06961572.1| hypothetical protein MtubKR_15262 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526310|ref|ZP_07013719.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777126|ref|ZP_07415463.1| hypothetical protein TMAG_01041 [Mycobacterium tuberculosis
           SUMu001]
 gi|306781032|ref|ZP_07419369.1| hypothetical protein TMBG_02983 [Mycobacterium tuberculosis
           SUMu002]
 gi|306785670|ref|ZP_07423992.1| hypothetical protein TMCG_02090 [Mycobacterium tuberculosis
           SUMu003]
 gi|306789710|ref|ZP_07428032.1| hypothetical protein TMDG_00030 [Mycobacterium tuberculosis
           SUMu004]
 gi|306794343|ref|ZP_07432645.1| hypothetical protein TMEG_03985 [Mycobacterium tuberculosis
           SUMu005]
 gi|306798767|ref|ZP_07437069.1| hypothetical protein TMFG_00036 [Mycobacterium tuberculosis
           SUMu006]
 gi|306804613|ref|ZP_07441281.1| hypothetical protein TMHG_02045 [Mycobacterium tuberculosis
           SUMu008]
 gi|306807353|ref|ZP_07444021.1| hypothetical protein TMGG_02026 [Mycobacterium tuberculosis
           SUMu007]
 gi|306973242|ref|ZP_07485903.1| hypothetical protein TMJG_01830 [Mycobacterium tuberculosis
           SUMu010]
 gi|307080951|ref|ZP_07490121.1| hypothetical protein TMKG_03274 [Mycobacterium tuberculosis
           SUMu011]
 gi|307085546|ref|ZP_07494659.1| hypothetical protein TMLG_01328 [Mycobacterium tuberculosis
           SUMu012]
 gi|313659786|ref|ZP_07816666.1| ribosome maturation protein RimP [Mycobacterium tuberculosis KZN
           V2475]
 gi|54040615|sp|P67215|RIMP_MYCBO RecName: Full=Ribosome maturation factor rimP
 gi|54042962|sp|P67214|RIMP_MYCTU RecName: Full=Ribosome maturation factor rimP
 gi|166988534|sp|A1KMI5|RIMP_MYCBP RecName: Full=Ribosome maturation factor rimP
 gi|166988535|sp|A5U6J4|RIMP_MYCTA RecName: Full=Ribosome maturation factor rimP
 gi|254801565|sp|C1AFV6|RIMP_MYCBT RecName: Full=Ribosome maturation factor rimP
 gi|2078017|emb|CAB08448.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13882682|gb|AAK47234.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31619613|emb|CAD95052.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494370|emb|CAL72851.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601996|gb|EAY61006.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151001|gb|EBA43046.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506835|gb|ABQ74644.1| hypothetical protein MRA_2865 [Mycobacterium tuberculosis H37Ra]
 gi|148722559|gb|ABR07184.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774329|dbj|BAH27135.1| hypothetical protein JTY_2857 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319575|gb|ACT24178.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           1435]
 gi|289417312|gb|EFD14552.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421462|gb|EFD18663.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438002|gb|EFD20495.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289539974|gb|EFD44552.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544784|gb|EFD48432.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687168|gb|EFD54656.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692090|gb|EFD59519.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695537|gb|EFD62966.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710524|gb|EFD74540.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289714526|gb|EFD78538.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496104|gb|EFI31398.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214495|gb|EFO73894.1| hypothetical protein TMAG_01041 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326140|gb|EFP14991.1| hypothetical protein TMBG_02983 [Mycobacterium tuberculosis
           SUMu002]
 gi|308329670|gb|EFP18521.1| hypothetical protein TMCG_02090 [Mycobacterium tuberculosis
           SUMu003]
 gi|308333809|gb|EFP22660.1| hypothetical protein TMDG_00030 [Mycobacterium tuberculosis
           SUMu004]
 gi|308337335|gb|EFP26186.1| hypothetical protein TMEG_03985 [Mycobacterium tuberculosis
           SUMu005]
 gi|308340978|gb|EFP29829.1| hypothetical protein TMFG_00036 [Mycobacterium tuberculosis
           SUMu006]
 gi|308346276|gb|EFP35127.1| hypothetical protein TMGG_02026 [Mycobacterium tuberculosis
           SUMu007]
 gi|308348793|gb|EFP37644.1| hypothetical protein TMHG_02045 [Mycobacterium tuberculosis
           SUMu008]
 gi|308357360|gb|EFP46211.1| hypothetical protein TMJG_01830 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361313|gb|EFP50164.1| hypothetical protein TMKG_03274 [Mycobacterium tuberculosis
           SUMu011]
 gi|308364914|gb|EFP53765.1| hypothetical protein TMLG_01328 [Mycobacterium tuberculosis
           SUMu012]
 gi|323718541|gb|EGB27711.1| hypothetical protein TMMG_03713 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326904455|gb|EGE51388.1| hypothetical protein TBPG_02361 [Mycobacterium tuberculosis W-148]
 gi|328457845|gb|AEB03268.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           4207]
          Length = 183

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 4/56 (7%)

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LD  N I G Y LEVSSPG++RP+  +  F R  G  V  E+VLS G   +L G++
Sbjct: 69  LDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKV--ELVLSDG--SRLTGRV 120


>gi|222153584|ref|YP_002562761.1| hypothetical protein SUB1470 [Streptococcus uberis 0140J]
 gi|259645120|sp|B9DVC1|RIMP_STRU0 RecName: Full=Ribosome maturation factor rimP
 gi|222114397|emb|CAR43160.1| conserved hypothetical protein [Streptococcus uberis 0140J]
          Length = 158

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 19/156 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV-- 82
           +S VI+P  E +     ++      + +L +FV+++ G +++ D   L++ ISP+LD   
Sbjct: 14  VSPVIEPPYELVDVEYEKMG----SDYILSVFVDKE-GGISVEDTVTLTELISPLLDAIH 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM---GT 138
            +     Y LEVSSPG++RP+       +  G  V   +   + DK K+  G ++   G 
Sbjct: 69  PDPFPEQYMLEVSSPGLERPLKTPEALTKAIGSYVNVSL-YKAIDKVKVFQGDLVAFDGD 127

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + T  +L+K ++         + I + ++  ARL V
Sbjct: 128 TLTIHYLDKTRQK-------TVEIPYQTVAKARLAV 156


>gi|302335789|ref|YP_003800996.1| protein of unknown function DUF150 [Olsenella uli DSM 7084]
 gi|301319629|gb|ADK68116.1| protein of unknown function DUF150 [Olsenella uli DSM 7084]
          Length = 157

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            ++L +    S  I+ +LD  + I G Y LEVSSPG+ RP+ ++ DF R+ G  V+ +  
Sbjct: 52  TISLDEVAAQSGWINEVLDDADPIAGSYVLEVSSPGLARPLRKERDFERFAGSDVSLKTF 111

Query: 123 LSSGDKQKLIGKIMG 137
              G +++  G+++G
Sbjct: 112 AREG-RRRFTGRLLG 125


>gi|264677929|ref|YP_003277836.1| hypothetical protein CtCNB1_1794 [Comamonas testosteroni CNB-2]
 gi|262208442|gb|ACY32540.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
          Length = 192

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 11/89 (12%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV----AC 119
           +T+ DCE++++ +   L+V+     + RLEVSSPGIDR +  + DF+R+ G  V      
Sbjct: 52  VTVEDCEKVTRQLQFALEVDGA--DYARLEVSSPGIDRLLRHEQDFIRFEGSEVDLTLKA 109

Query: 120 EIVLSSGDK-----QKLIGKIMGTSETGF 143
            I  + GDK     +K  G +  T E G+
Sbjct: 110 PIGAAGGDKINANRKKFRGTLERTEEGGW 138


>gi|299530200|ref|ZP_07043626.1| hypothetical protein CTS44_05471 [Comamonas testosteroni S44]
 gi|298721857|gb|EFI62788.1| hypothetical protein CTS44_05471 [Comamonas testosteroni S44]
          Length = 182

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 11/89 (12%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV----AC 119
           +T+ DCE++++ +   L+V+     + RLEVSSPGIDR +  + DF+R+ G  V      
Sbjct: 42  VTVEDCEKVTRQLQFALEVDGA--DYARLEVSSPGIDRLLRHEQDFIRFEGSEVDLTLKA 99

Query: 120 EIVLSSGDK-----QKLIGKIMGTSETGF 143
            I  + GDK     +K  G +  T E G+
Sbjct: 100 PIGAAGGDKINANRKKFRGTLERTEEGGW 128


>gi|116073741|ref|ZP_01471003.1| hypothetical protein RS9916_34862 [Synechococcus sp. RS9916]
 gi|116069046|gb|EAU74798.1| hypothetical protein RS9916_34862 [Synechococcus sp. RS9916]
          Length = 155

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  D++SV      +  F    + L    + + +Q+ + R  G ++TL DC  LS  +  
Sbjct: 5   LLPDLTSVAAATAAQQGFELADLQLHTHLRPMTVQVQIRRPGGVDVTLDDCAGLSGPMGD 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            ++  +++   Y LE+SSPGI   +    DF  + G  V   I    G  Q L G ++  
Sbjct: 65  AIEASSLLTDAYVLEISSPGIGDLVQSDRDFQTFRGFPVEVTINEGDGPPQTLSGSLLDR 124

Query: 139 SETGFFLEKEKRGEK 153
           S+    +  + R +K
Sbjct: 125 SDNHLEINMKGRIKK 139


>gi|221067738|ref|ZP_03543843.1| protein of unknown function DUF150 [Comamonas testosteroni KF-1]
 gi|220712761|gb|EED68129.1| protein of unknown function DUF150 [Comamonas testosteroni KF-1]
          Length = 192

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 11/89 (12%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV----AC 119
           +T+ DCE++++ +   L+V+     + RLEVSSPGIDR +  + DF+R+ G  V      
Sbjct: 52  VTVEDCEKVTRQLQFALEVDGA--DYARLEVSSPGIDRLLRHEQDFIRFEGSEVDLTLKA 109

Query: 120 EIVLSSGDK-----QKLIGKIMGTSETGF 143
            I  + GDK     +K  G +  T E G+
Sbjct: 110 PIGAAGGDKINANRKKFRGTLERTEEGGW 138


>gi|83816343|ref|YP_445896.1| hypothetical protein SRU_1779 [Salinibacter ruber DSM 13855]
 gi|83757737|gb|ABC45850.1| Uncharacterized BCR, YhbC family COG0779 [Salinibacter ruber DSM
           13855]
          Length = 217

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 68/127 (53%), Gaps = 3/127 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           LA  +S + + VI    +  V + +   K   +++++++ ++  +   D   +S+ I  +
Sbjct: 70  LADRVSGLTEEVIVGTDYFLVDVEVRGHKGTRVVEVYIDSEE-EVGHDDLALISKEIGFL 128

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++++G Y+LE+SSPGI RP+   + + +  G  +      S GD++ ++G +    
Sbjct: 129 LDVEDVVDGSYKLELSSPGIKRPLTMPAQYRKNVGRTLRVRFE-SDGDEEIVVGDLTDAD 187

Query: 140 ETGFFLE 146
           +    LE
Sbjct: 188 DEEIELE 194


>gi|296171599|ref|ZP_06852839.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894054|gb|EFG73816.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 175

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           D  + L     LS++ S +LD  + +   Y LEVSSPG+DRP+  +  F R  G  V  +
Sbjct: 47  DKALDLDTIATLSRSASALLDGLDDVGDRYVLEVSSPGVDRPLTSEKHFRRARGRKV--D 104

Query: 121 IVLSSGDKQKLIGKI 135
           +VLS G   +L G++
Sbjct: 105 VVLSDG--SRLTGRV 117


>gi|16329286|ref|NP_440014.1| hypothetical protein slr0742 [Synechocystis sp. PCC 6803]
 gi|1651766|dbj|BAA16694.1| slr0742 [Synechocystis sp. PCC 6803]
          Length = 176

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 5/108 (4%)

Query: 24  DISSVIQPVIEEMSFRSV-QISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           DI ++ QP+ E++       +    ++  +L+I +     + +L DCE  S++    L+ 
Sbjct: 33  DILALAQPIAEDLGLEVTDAVFQTNKRPPVLRIDIRNLQQDTSLNDCEAFSRSFEAQLEE 92

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            ++I   Y LEVSSPGI   +  + DF+ + G     E+V++S +  +
Sbjct: 93  SSLIASAYVLEVSSPGISPYLATERDFIAFKGF----EVVVTSDNPHQ 136


>gi|323350355|ref|ZP_08086019.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           VMC66]
 gi|322123428|gb|EFX95104.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           VMC66]
 gi|327472755|gb|EGF18182.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK408]
          Length = 177

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L +FV++ +G +T+ D  +L+  ISP+LD    +     Y LEV+SPG++RP+  K 
Sbjct: 54  DYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQIKPDPFPEQYFLEVTSPGLERPLKTKE 112

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF----FLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DKQK+    + + E       +L+K +R E       + I 
Sbjct: 113 QLADAVGSYIHVSL-YKAVDKQKVFEGTLLSFEGEVLHMEYLDKTRRKE-------VEIP 164

Query: 164 FDSLLSARLIV 174
           +  +  ARL V
Sbjct: 165 YSLVSKARLAV 175


>gi|325105521|ref|YP_004275175.1| protein of unknown function DUF150 [Pedobacter saltans DSM 12145]
 gi|324974369|gb|ADY53353.1| protein of unknown function DUF150 [Pedobacter saltans DSM 12145]
          Length = 153

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 68/128 (53%), Gaps = 6/128 (4%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           +N  + + ++ D+G +T+ DC ++S+ +   L+ EN++   Y+LEV S G+D  +V    
Sbjct: 29  QNKKITLLLDGDNG-ITIEDCAKVSRHVGYHLEEENLMTEAYQLEVGSAGLDAALVLDRQ 87

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE-KRGEKDMNELQIAISFDSL 167
           + +  G      +++   D  K+ GK++G + T   +  E K   K    ++  I  +++
Sbjct: 88  YQKNIGR----NLLVKKVDGSKIEGKLIGANPTNLVISHEVKEKGKKAQTVETVIEKENI 143

Query: 168 LSARLIVT 175
            SA++ ++
Sbjct: 144 ASAKVSIS 151


>gi|312892422|ref|ZP_07751917.1| protein of unknown function DUF150 [Mucilaginibacter paludis DSM
           18603]
 gi|311295206|gb|EFQ72380.1| protein of unknown function DUF150 [Mucilaginibacter paludis DSM
           18603]
          Length = 161

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 7/108 (6%)

Query: 41  VQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGID 100
           V + +L  + L+  I V+ D G + + DC  +S+ +   L+ +N+IE  Y LEVSSPGID
Sbjct: 24  VDVKMLPNRKLI--ILVDGDAG-IGIADCAAISRFVGFKLEEDNVIEEAYNLEVSSPGID 80

Query: 101 RPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            P+      +R     +  ++ +   D Q   GK++  +E    ++++
Sbjct: 81  SPLT----LIRQYTKNIGRDLSVKMTDGQLREGKLLSLAEDAIVIDEK 124


>gi|34223734|sp|P72687|RIMP_SYNY3 RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 5/108 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           DI ++ QP+ E++            K   +L+I +     + +L DCE  S++    L+ 
Sbjct: 8   DILALAQPIAEDLGLEVTDAVFQTNKRPPVLRIDIRNLQQDTSLNDCEAFSRSFEAQLEE 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            ++I   Y LEVSSPGI   +  + DF+ + G     E+V++S +  +
Sbjct: 68  SSLIASAYVLEVSSPGISPYLATERDFIAFKGF----EVVVTSDNPHQ 111


>gi|300361903|ref|ZP_07058080.1| protein of hypothetical function DUF150 [Lactobacillus gasseri
           JV-V03]
 gi|300354522|gb|EFJ70393.1| protein of hypothetical function DUF150 [Lactobacillus gasseri
           JV-V03]
          Length = 172

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 13/156 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S  LD  
Sbjct: 22  VADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVSEKLDEL 81

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +   ++ 
Sbjct: 82  DPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTYEGTLKDLNQD 141

Query: 142 GFFLE---KEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE   K +R E       I I   ++ S+R  V
Sbjct: 142 QIVLEVKIKTRRKE-------ITIPRKTIASSRFAV 170


>gi|325479429|gb|EGC82525.1| hypothetical protein HMPREF9290_1585 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 147

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 11/152 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  + +  I E+ +  V I     K N +L  F+  ++G +T+ DCE++S  + 
Sbjct: 1   MDLTDRLREIFEADISELGYELVDIEYKGSKGNKILTFFIFNEEG-ITIDDCEKVSAFLD 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSS  + RP+    D  R    V+  ++     D +  +GK+  
Sbjct: 60  TRLDELDLIKDSYYLEVSSQDLSRPLKTDRDIERNINEVLKVKM----KDGEVFLGKVSD 115

Query: 138 TSETGFFLEKE-----KRGEKDMNELQIAISF 164
            +E  +  + E     +  + D+ ++ I I F
Sbjct: 116 INEDTYEFDLEDGTSRQVNKSDVKQINIEIVF 147


>gi|254423906|ref|ZP_05037624.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196191395|gb|EDX86359.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 154

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 41/88 (46%)

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           L DCE LS A++  LD  N+I   Y LEVSSPG+   +    DF  + G  V   +    
Sbjct: 52  LNDCERLSIALTEALDESNLIPDAYVLEVSSPGVSDVLSSDRDFKVFKGFPVEVRLSEPY 111

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEK 153
             KQ   G ++G  +    L  + R  K
Sbjct: 112 KSKQIWRGSLIGRDDDKLTLNLKGRPVK 139


>gi|320449996|ref|YP_004202092.1| 15 kDa protein [Thermus scotoductus SA-01]
 gi|320150165|gb|ADW21543.1| 15 kDa protein [Thermus scotoductus SA-01]
          Length = 141

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 35  EMSFRSVQISLLEEKNLLLQIFVE---RDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           E +   + + +LE K    ++ V    +D+  + + D E  S+AI  + D E+ I G YR
Sbjct: 8   EEAVEPLDLEVLEVKEAPGEVLVRLERKDERPIRVADLERASRAIEAVFDQEDPIPGSYR 67

Query: 92  LEVSSPGIDRPMVRKSDFLRWNG 114
           L V SPG  RP+  +  F R+ G
Sbjct: 68  LLVESPGPKRPLFTRRHFERFQG 90


>gi|218887602|ref|YP_002436923.1| hypothetical protein DvMF_2516 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226701448|sp|B8DN15|RIMP_DESVM RecName: Full=Ribosome maturation factor rimP
 gi|218758556|gb|ACL09455.1| protein of unknown function DUF150 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 226

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            +T+  C  LS+ +   LDVE+++   Y LEVSSPG++RP    +  + + G  +   + 
Sbjct: 75  GVTIDQCARLSRQLGLALDVEDVVRDAYVLEVSSPGLERPFFEIAQVVPYVGRTIELTLA 134

Query: 123 LSSGD---KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   +   ++K    I+           +     D +   I++++D +  A LI
Sbjct: 135 VPHPEWPGRRKFRADIVRVEGDTLTFLPDTAPRPDEDPAPISVAWDDVKKAHLI 188


>gi|312865482|ref|ZP_07725709.1| conserved hypothetical protein [Streptococcus downei F0415]
 gi|311099000|gb|EFQ57217.1| conserved hypothetical protein [Streptococcus downei F0415]
          Length = 134

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I V++ +G +T+ D  EL+  ISP+LD    +     Y LE+SSPG++RP+    
Sbjct: 11  DYVLSILVDKPEG-ITVDDTAELTDIISPLLDTIKPDPFPSQYMLEISSPGLERPLKTAE 69

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIM---GTSETGFFLEKEKRGEKDMNELQIAIS 163
                 G  +   +   + DK K+  G ++   G + T  +L+K ++        Q+ I 
Sbjct: 70  SLEAAIGSYINVSL-YKAIDKVKVFEGDLLDFDGQTLTLEYLDKTRKK-------QVEIP 121

Query: 164 FDSLLSARLIV 174
           + ++  AR+ V
Sbjct: 122 YSTVAKARMAV 132


>gi|171778094|ref|ZP_02919351.1| hypothetical protein STRINF_00186 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283076|gb|EDT48500.1| hypothetical protein STRINF_00186 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 146

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 15/131 (11%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I +++  G +T+ D  +L++ ISP+LD    +     Y LEVSSPG++RP+  K 
Sbjct: 23  DYVLSILIDKP-GGITVNDTADLTEIISPLLDAIKPDPFPEQYMLEVSSPGLERPLKTKE 81

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLI-GKIM---GTSETGFFLEKEKRGEKDMNELQIAIS 163
              +  G  V   +   + DK K+  G ++   G + T  +L+K ++         + I 
Sbjct: 82  ALEKALGSYVNVSL-YKAIDKVKVFQGDLVAFDGETLTIDYLDKTRKK-------TVEIP 133

Query: 164 FDSLLSARLIV 174
           + ++  ARL V
Sbjct: 134 YSTVAKARLAV 144


>gi|331698437|ref|YP_004334676.1| ribosome maturation factor rimP [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953126|gb|AEA26823.1| Ribosome maturation factor rimP [Pseudonocardia dioxanivorans
           CB1190]
          Length = 176

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 8/119 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD--GNMTLRDCEELSQAIS 77
           L   +  V++P++    F   ++ +    +   +++ V+  D    + L D   LS+A S
Sbjct: 7   LGRQLQDVLEPIVAGAGFELDELDVRATGRRHTVKVVVDSADEAAGVNLDDIARLSRAAS 66

Query: 78  PILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  E++I G Y LEV+SPGIDRP+ +   + R   ++   E+ L  G   KL G+I
Sbjct: 67  AELDQHEHLIGGSYTLEVTSPGIDRPLTQPRHWRR--AYLRLVEVTLVEGG--KLAGRI 121


>gi|116627257|ref|YP_819876.1| hypothetical protein STER_0379 [Streptococcus thermophilus LMD-9]
 gi|122268140|sp|Q03M92|RIMP_STRTD RecName: Full=Ribosome maturation factor rimP
 gi|116100534|gb|ABJ65680.1| Uncharacterized protein conserved in bacteria [Streptococcus
           thermophilus LMD-9]
 gi|312277741|gb|ADQ62398.1| Ribosome maturation factor rimP [Streptococcus thermophilus ND03]
          Length = 157

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 21/159 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +++V+ P I +  +  V I    EK   + +L + +++  G +T+ D  +L++ ISP+LD
Sbjct: 9   VTAVVAPAIPD-PYELVDIEY--EKIGSDYILSVLIDKP-GGITVEDTADLTEIISPLLD 64

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM-- 136
               +     Y LEVSSPG++RP+  K       G  +   +   + DK K+  G ++  
Sbjct: 65  TIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSL-YKAIDKIKIFQGDLLAF 123

Query: 137 -GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + T  +L+K +          + I + ++  ARL V
Sbjct: 124 DGETLTIDYLDKTRHK-------TVEIPYQTVAKARLAV 155


>gi|284044672|ref|YP_003395012.1| hypothetical protein Cwoe_3218 [Conexibacter woesei DSM 14684]
 gi|283948893|gb|ADB51637.1| protein of unknown function DUF150 [Conexibacter woesei DSM 14684]
          Length = 139

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           +++F++  DG ++L  CE ++  ++ I +        Y LEVSSPG +RP+ + + F R+
Sbjct: 32  VRLFIDHPDG-VSLELCERVTHHLAGIRE-------RYGLEVSSPGSERPLTKPAHFRRY 83

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            G         + G +    G+++G +E+
Sbjct: 84  LGQRARVRTRGAHGGQGSFTGELVGANES 112


>gi|160947564|ref|ZP_02094731.1| hypothetical protein PEPMIC_01499 [Parvimonas micra ATCC 33270]
 gi|158446698|gb|EDP23693.1| hypothetical protein PEPMIC_01499 [Parvimonas micra ATCC 33270]
          Length = 154

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E K  +L+IF+++D G + L  CE  S  IS  LD  + IE  Y LEVSSPG++R +   
Sbjct: 34  EPKGNVLRIFIDKD-GGVDLDSCEMTSNIISDWLDEVDPIEDSYFLEVSSPGVEREIKSD 92

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIG 133
                + G  V  +      ++++ IG
Sbjct: 93  EQLKTFIGKKVLVKCYKKINNEKEFIG 119


>gi|326771739|ref|ZP_08231024.1| YhbC family protein [Actinomyces viscosus C505]
 gi|326637872|gb|EGE38773.1| YhbC family protein [Actinomyces viscosus C505]
          Length = 172

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 10  KYEPRIFGDMGLAGDISSVIQPVIEE--MSFRSVQISLLEEKNLLLQIFVERDDG--NMT 65
           + +PR   D  LA  ++ ++ P++ +  +   SV+ +    K  ++++FV+  DG  ++ 
Sbjct: 7   RKDPRQRAD-ALARSLTDLLAPIVNDAGLHLESVETTR-AGKYSVVRVFVDLVDGPGDLD 64

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           L     ++ AIS  LD  + ++G Y LEVS+PG +R +     F R  GH
Sbjct: 65  LDALGPVTAAISQALDEADPVKGQYTLEVSTPGAERELTTLRHFRRAVGH 114


>gi|117928725|ref|YP_873276.1| hypothetical protein Acel_1518 [Acidothermus cellulolyticus 11B]
 gi|259585656|sp|A0LV30|RIMP_ACIC1 RecName: Full=Ribosome maturation factor rimP
 gi|117649188|gb|ABK53290.1| protein of unknown function DUF150 [Acidothermus cellulolyticus
           11B]
          Length = 170

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 7/103 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILD-- 81
           ++ ++ PV+         ++LL+ + +  L+I V++D G + L +    SQAIS  LD  
Sbjct: 10  LAELLAPVVAGQGLDLEGVTLLDHRTSAHLRIVVDKD-GGVQLDEIAAASQAISHFLDND 68

Query: 82  --VENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
              + II    Y LEVSSPGIDRP+V    + R  G +V  ++
Sbjct: 69  AEADAIIGPRSYTLEVSSPGIDRPLVEPRHWRRAIGRLVRVQL 111


>gi|325962804|ref|YP_004240710.1| hypothetical protein Asphe3_14020 [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468891|gb|ADX72576.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 192

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFV---ERDDGNMTLRDCEELSQAISP 78
           A  + ++++P ++        ++++   + ++ + V   + + G + L    ++S+ +S 
Sbjct: 16  AARLRALLEPAVQANRLYLEDVAIVAGSHRVVHVVVDLPQEETGGVGLDVIADISKVLSD 75

Query: 79  ILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +LD +   +G  Y LEVSSPG+ RP+     + R  G +V   ++   GD   + G+I  
Sbjct: 76  VLDNDPGDDGRPYDLEVSSPGVGRPLTEPRHWHRAKGRLVKVNVL--QGD--NVTGRIQA 131

Query: 138 TSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
             + G  +  E   K+G K      + + FD + + ++
Sbjct: 132 VDDAGVTIVPEIAVKKGMKPRQGDPVKLPFDRIRNGKV 169


>gi|300788186|ref|YP_003768477.1| hypothetical protein AMED_6341 [Amycolatopsis mediterranei U32]
 gi|299797700|gb|ADJ48075.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 168

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 6/88 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV-ENIIEGHYRLEVSSPGIDRPMVRKS 107
           +  L+++ V+ DDG + L +  E+S+ +S  LD  E+++   Y LEV+SPG+DRP+ +  
Sbjct: 22  RRQLVKVVVDSDDG-VGLDEIAEISRTVSATLDENEHVLASAYTLEVTSPGLDRPLTQPR 80

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            + R    +V     +S  +    +G++
Sbjct: 81  HWRRARFRLVK----ISPAEGAPFVGRV 104


>gi|325677900|ref|ZP_08157542.1| hypothetical protein CUS_7307 [Ruminococcus albus 8]
 gi|324110454|gb|EGC04628.1| hypothetical protein CUS_7307 [Ruminococcus albus 8]
          Length = 183

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ + QP+ +E+      +   +E     L++ +++D G +T+ DCE  ++  + ILD E
Sbjct: 19  VTELAQPLADELGLFLWDVRFEKEGATWYLRVLIDKD-GGVTMEDCENFTRPFNKILDDE 77

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS--SGDKQKLIG 133
           + I   Y  E  SPG+ R + +   F    G  V   ++    +G+++ ++G
Sbjct: 78  DPIAQSYVFECGSPGLGRELRKPIHFEVCIGDAVRVRLIRPDENGEREFIVG 129


>gi|94986975|ref|YP_594908.1| transcription elongation factor [Lawsonia intracellularis
           PHE/MN1-00]
 gi|167013025|sp|Q1MQZ0|RIMP_LAWIP RecName: Full=Ribosome maturation factor rimP
 gi|94731224|emb|CAJ54587.1| transcription elongation factor [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 196

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--------------MT 65
            L   I+ +I P+I     +   I L+     +++IFV+  + N              +T
Sbjct: 5   ALIETITQLISPLITAQGLKLWGIELINIPQPIIKIFVDTIETNRLHENNIINSKSEQIT 64

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMV---RKSDFLRWNGHVVACEIV 122
           +  C  LS+ I   L+VE +    + LEVSSPG++R      + S+++  +  V   E  
Sbjct: 65  IEQCASLSRLIGLTLEVEELFPNKWTLEVSSPGLERSFFTIQQLSNYINHDIDVTLKEQH 124

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +++K  G ++  ++  F L       K      ++I++  +  A L+
Sbjct: 125 PLWPNRKKFYGTLISITDNTFMLNLSLAHRKSDEPENVSINWQQVRKATLV 175


>gi|307331527|ref|ZP_07610640.1| protein of unknown function DUF150 [Streptomyces violaceusniger Tu
           4113]
 gi|306882844|gb|EFN13917.1| protein of unknown function DUF150 [Streptomyces violaceusniger Tu
           4113]
          Length = 174

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 60  DDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
           DDG + L  C ELS+ IS  LD  + + +  Y LEV+SPG +RP+     + R  G ++ 
Sbjct: 45  DDG-VQLDTCAELSRDISQTLDDTDAMGQVAYVLEVTSPGAERPLTEPRHYRRATGRLMR 103

Query: 119 CEIVLSSGDKQKLIGKIMGTSETGFFLE 146
             +     D  +L+ +I+   + G  LE
Sbjct: 104 ARLT----DDAELVARIVSVDDEGLDLE 127


>gi|227486446|ref|ZP_03916762.1| protein of hypothetical function DUF150 [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227235627|gb|EEI85642.1| protein of hypothetical function DUF150 [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 147

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 13/153 (8%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL--EEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
           M L   + + ++  IE + +  V +  +  ++ N L+  ++ ++DG +T+ DCE +S  +
Sbjct: 1   MDLIEKLKNALESDIENLGYDLVDLEFIGGKDGNRLI-FYIYKEDG-ITIDDCERVSGFL 58

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              LD  ++I+  Y LEVSS  + RP+    D LR    ++  +I L +GD   ++ K+ 
Sbjct: 59  DEKLDELDLIKSSYYLEVSSQDLSRPLKTDKDLLRNKDELL--KIKLKNGD--LILAKMK 114

Query: 137 GTSETGFFLEKE-----KRGEKDMNELQIAISF 164
              +      KE     +  + D+ E++I I F
Sbjct: 115 DIKDESIVFAKEDGKDIEINKSDIKEIKIEIVF 147


>gi|94994922|ref|YP_603020.1| hypothetical protein MGAS10750_Spy1526 [Streptococcus pyogenes
           MGAS10750]
 gi|166979761|sp|Q1J5B0|RIMP_STRPF RecName: Full=Ribosome maturation factor rimP
 gi|94548430|gb|ABF38476.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
          Length = 178

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 4/64 (6%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+ + +
Sbjct: 55  DYILSILVDKE-GGITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPL-KTA 112

Query: 108 DFLR 111
           D L+
Sbjct: 113 DSLK 116


>gi|56807386|ref|ZP_00365365.1| COG0779: Uncharacterized protein conserved in bacteria
           [Streptococcus pyogenes M49 591]
          Length = 162

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 4/64 (6%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+ + +
Sbjct: 39  DYILSILVDKE-GGITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPL-KTA 96

Query: 108 DFLR 111
           D L+
Sbjct: 97  DSLK 100


>gi|50914807|ref|YP_060779.1| hypothetical protein M6_Spy1461 [Streptococcus pyogenes MGAS10394]
 gi|71904118|ref|YP_280921.1| hypothetical protein M28_Spy1456 [Streptococcus pyogenes MGAS6180]
 gi|71911226|ref|YP_282776.1| hypothetical protein M5005_Spy_1413 [Streptococcus pyogenes
           MGAS5005]
 gi|94989045|ref|YP_597146.1| hypothetical protein MGAS9429_Spy1415 [Streptococcus pyogenes
           MGAS9429]
 gi|94991043|ref|YP_599143.1| hypothetical protein MGAS10270_Spy1534 [Streptococcus pyogenes
           MGAS10270]
 gi|94992936|ref|YP_601035.1| hypothetical protein MGAS2096_Spy1439 [Streptococcus pyogenes
           MGAS2096]
 gi|209559842|ref|YP_002286314.1| hypothetical protein Spy49_1341c [Streptococcus pyogenes NZ131]
 gi|34223094|sp|P59819|RIMP_STRP1 RecName: Full=Ribosome maturation factor rimP
 gi|73921027|sp|Q5XAG7|RIMP_STRP6 RecName: Full=Ribosome maturation factor rimP
 gi|91208006|sp|Q48RU4|RIMP_STRPM RecName: Full=Ribosome maturation factor rimP
 gi|166979769|sp|Q1JFG0|RIMP_STRPD RecName: Full=Ribosome maturation factor rimP
 gi|166979847|sp|Q1JAB7|RIMP_STRPB RecName: Full=Ribosome maturation factor rimP
 gi|166979918|sp|Q1JKG7|RIMP_STRPC RecName: Full=Ribosome maturation factor rimP
 gi|226695935|sp|B5XHV7|RIMP_STRPZ RecName: Full=Ribosome maturation factor rimP
 gi|50903881|gb|AAT87596.1| Hypothetical cytosolic protein [Streptococcus pyogenes MGAS10394]
 gi|71803213|gb|AAX72566.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS6180]
 gi|71854008|gb|AAZ52031.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS5005]
 gi|94542553|gb|ABF32602.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
 gi|94544551|gb|ABF34599.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
 gi|94546444|gb|ABF36491.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
 gi|209541043|gb|ACI61619.1| transcription termination protein NusA-like protein [Streptococcus
           pyogenes NZ131]
          Length = 178

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 4/64 (6%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+ + +
Sbjct: 55  DYILSILVDKE-GGITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPL-KTA 112

Query: 108 DFLR 111
           D L+
Sbjct: 113 DSLK 116


>gi|325000942|ref|ZP_08122054.1| ribosome maturation protein RimP [Pseudonocardia sp. P1]
          Length = 209

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 24/173 (13%)

Query: 21  LAGDISSVIQPVIEEMSFR--SVQISLLEEKN---LLLQIFVERDDGNMTLRDCEELSQA 75
           LA  +  V++PV+ +      +V++     ++   L++ +        + L D   LS+ 
Sbjct: 23  LADQLRGVLEPVVTDAGLEIDAVEVRTAGRRHAVKLVVDLPEASTATGIDLDDIARLSRT 82

Query: 76  ISPILDV-ENIIEGHYRLEVSSPGIDRPMVR----KSDFLRWNGHVVACEIVLSSGDK-Q 129
            +  LD  E++IEG Y LEV+SPGIDRP+      + +FLR         I L+ GD  +
Sbjct: 83  AAAELDPHEHLIEGSYTLEVTSPGIDRPLTTPRHWRRNFLRL------ARITLAGGDDLE 136

Query: 130 KLIGKIMGTSETGFFLEKEKRGE------KDMNELQIAISFDSLLSARLIVTD 176
             IG+  G       +   K+ E       D+   Q+ + F    +A   + D
Sbjct: 137 ARIGR-AGDDRVQVAVPGRKQPELREIAYDDVTHAQVQVEFKPAPAAETALLD 188


>gi|139473253|ref|YP_001127968.1| hypothetical protein SpyM50378 [Streptococcus pyogenes str.
           Manfredo]
 gi|166990902|sp|A2RCZ7|RIMP_STRPG RecName: Full=Ribosome maturation factor rimP
 gi|134271499|emb|CAM29720.1| conserved hypothetical protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 178

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 4/64 (6%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+ + +
Sbjct: 55  DYILSILVDKE-GGITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPL-KTA 112

Query: 108 DFLR 111
           D L+
Sbjct: 113 DSLK 116


>gi|317057641|ref|YP_004106108.1| hypothetical protein Rumal_3009 [Ruminococcus albus 7]
 gi|315449910|gb|ADU23474.1| protein of unknown function DUF150 [Ruminococcus albus 7]
          Length = 181

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 58/114 (50%), Gaps = 4/114 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ + QP+ +E+      +   +E     L++ +++D G +T+ DCE  ++  + ILD  
Sbjct: 17  VAGLAQPLADELGLFLWDVRFEKEGATWYLRVLIDKD-GGVTMEDCENFTRPFNKILDEA 75

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS--SGDKQKLIGKI 135
           + I   Y  E  SPG+ R + +   F    G VV   ++    +G+++ ++G +
Sbjct: 76  DPIPQSYVFECGSPGLGRELRKPIHFEVCIGDVVRVRLIRPDENGEREFIVGLV 129


>gi|15675575|ref|NP_269749.1| hypothetical protein SPy_1725 [Streptococcus pyogenes M1 GAS]
 gi|19746627|ref|NP_607763.1| hypothetical protein spyM18_1733 [Streptococcus pyogenes MGAS8232]
 gi|13622779|gb|AAK34470.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|19748846|gb|AAL98262.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 127

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 4/64 (6%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+ + +
Sbjct: 4   DYILSILVDKE-GGITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPL-KTA 61

Query: 108 DFLR 111
           D L+
Sbjct: 62  DSLK 65


>gi|306826864|ref|ZP_07460164.1| protein of hypothetical function DUF150 [Streptococcus pyogenes
           ATCC 10782]
 gi|34223095|sp|P59820|RIMP_STRP8 RecName: Full=Ribosome maturation factor rimP
 gi|304430882|gb|EFM33891.1| protein of hypothetical function DUF150 [Streptococcus pyogenes
           ATCC 10782]
          Length = 178

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 4/64 (6%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKS 107
           + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+ + +
Sbjct: 55  DYILSILVDKE-GGITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPL-KTA 112

Query: 108 DFLR 111
           D L+
Sbjct: 113 DSLK 116


>gi|309811524|ref|ZP_07705306.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
 gi|308434575|gb|EFP58425.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
          Length = 183

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 43  ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDR 101
           + +L ++++ L+  VE     +TL +  + ++ I   L+  +++ E  Y LEVSSPG DR
Sbjct: 37  VRVLVDRDVALETAVEESIEPVTLDEVTDATRVIDAELEASDVMGEQPYVLEVSSPGTDR 96

Query: 102 PMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEK 153
           P+     F R  G +V   +     D+ K+ G+I         +  E+ G+K
Sbjct: 97  PLTLPRHFARNVGRLVTVTL----DDESKVAGRITRADAQTVEVTPEQGGKK 144


>gi|325067075|ref|ZP_08125748.1| ribosome maturation protein RimP [Actinomyces oris K20]
          Length = 172

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 10  KYEPRIFGDMGLAGDISSVIQPVIEE--MSFRSVQISLLEEKNLLLQIFVERDDG--NMT 65
           + +PR   D  LA  ++ ++ P++ +  +   SV+ +    K  ++++FV+  DG  ++ 
Sbjct: 7   RKDPRQRAD-ALARSLADLLSPIVNDAGLHLESVETTR-AGKYSVVRVFVDLLDGPGDLD 64

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           L     ++ AIS  LD  + ++G Y LEVS+PG +R +     F R  GH
Sbjct: 65  LDALGPVTAAISQALDEADPVKGQYTLEVSTPGAERELTTLRHFRRAVGH 114


>gi|55820433|ref|YP_138875.1| hypothetical protein stu0340 [Streptococcus thermophilus LMG 18311]
 gi|55822317|ref|YP_140758.1| hypothetical protein str0340 [Streptococcus thermophilus CNRZ1066]
 gi|81559802|sp|Q5M1C3|RIMP_STRT1 RecName: Full=Ribosome maturation factor rimP
 gi|81560972|sp|Q5M5V9|RIMP_STRT2 RecName: Full=Ribosome maturation factor rimP
 gi|55736418|gb|AAV60060.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55738302|gb|AAV61943.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 163

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 21/159 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +++V+ P I +  +  V I    EK   + +L + +++  G +T+ D  +L++ ISP+LD
Sbjct: 15  VTAVVAPAIPD-PYELVDIEY--EKIGSDYILSVLIDKP-GGITVEDTADLTEIISPLLD 70

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM-- 136
               +     Y LEVSSPG++RP+  K       G  +   +   + DK K+  G ++  
Sbjct: 71  TIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSL-YKAIDKIKIFQGDLLAF 129

Query: 137 -GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + T  +L+K +          + I + ++  ARL V
Sbjct: 130 DGETLTIDYLDKTRHK-------TVEIPYQTVAKARLAV 161


>gi|226355943|ref|YP_002785683.1| hypothetical protein Deide_10390 [Deinococcus deserti VCD115]
 gi|259585746|sp|C1CUR2|RIMP_DEIDV RecName: Full=Ribosome maturation factor rimP
 gi|226317933|gb|ACO45929.1| conserved hypothetical protein [Deinococcus deserti VCD115]
          Length = 154

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 15/117 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE---EKNLLLQIFVER-DDGNMTLRDCEELSQAISPIL 80
           +  +    +E + F  +++ +     EK +L++  V+R D+  +T+ D  + S+A     
Sbjct: 11  LQQIAHAAVEPLGFEVLEVQVQSQGGEKIVLVR--VDRLDEQPVTMEDLTKASRAAEAEF 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDF---------LRWNGHVVACEIVLSSGDK 128
           D  + + G YRLE  SPG  RP+ R   F         +R  GH     I   SGD+
Sbjct: 69  DRLDPVAGEYRLEFESPGSKRPLTRARHFERMLGLKARVRGEGHAFTAPIKAVSGDQ 125


>gi|312880099|ref|ZP_07739899.1| protein of unknown function DUF150 [Aminomonas paucivorans DSM
           12260]
 gi|310783390|gb|EFQ23788.1| protein of unknown function DUF150 [Aminomonas paucivorans DSM
           12260]
          Length = 151

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 5/93 (5%)

Query: 61  DGNMTLRDCEELSQAISPILDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
           +G ++L+DCE  ++ ++  LD  +      + LEVSSPG +RP+VR  D+ R+ G  +  
Sbjct: 45  EGGISLQDCETAAREVNAFLDEHDEAFSEPFFLEVSSPGPERPLVRLEDYRRFRGEWI-- 102

Query: 120 EIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE 152
            I   +G K+ L   I    E G    + + GE
Sbjct: 103 RISWKNGKKRVLC--IDDVGEDGVVTLRSREGE 133


>gi|254821856|ref|ZP_05226857.1| hypothetical protein MintA_18122 [Mycobacterium intracellulare ATCC
           13950]
          Length = 170

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
              LS++ S +LD  + I  HY LEVSS G+DRP+     F R  G  V  ++ LS G  
Sbjct: 55  AATLSRSASALLDDLDTIGDHYVLEVSSRGVDRPLTSAKHFRRARGRKV--DLTLSDG-- 110

Query: 129 QKLIGKIMGTSETGFFL 145
             L G+I  T+E    L
Sbjct: 111 STLTGRIGETNEDAVAL 127


>gi|269956008|ref|YP_003325797.1| hypothetical protein Xcel_1208 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304689|gb|ACZ30239.1| protein of unknown function DUF150 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 192

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%)

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + +S+AIS  LD ++++ G Y LEVS+PG  RP+     F R    +V   +V     + 
Sbjct: 69  DAVSRAISAALDADDVVRGVYVLEVSTPGTSRPLTELRHFKRARTRLVTLSLVDGGEAEG 128

Query: 130 KLIGKIMGTSETGFFLEKEKR 150
           +L   + GT      LE   R
Sbjct: 129 RLQDVVAGTDGDELVLEDGGR 149


>gi|183981904|ref|YP_001850195.1| hypothetical protein MMAR_1891 [Mycobacterium marinum M]
 gi|226696166|sp|B2HKR9|RIMP_MYCMM RecName: Full=Ribosome maturation factor rimP
 gi|183175230|gb|ACC40340.1| conserved hypothetical protein [Mycobacterium marinum M]
          Length = 177

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 8/78 (10%)

Query: 61  DGNMTLRDCEE---LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           DG+ TL D +    LS++ S +LD  + I   Y LEVSSPGIDRP+  +  F R  G  V
Sbjct: 45  DGDTTL-DLDTIAVLSRSASSLLDSLDNIGDSYVLEVSSPGIDRPLTSEKHFRRARGRKV 103

Query: 118 ACEIVLSSGDKQKLIGKI 135
             E+ L+ G   +L G+I
Sbjct: 104 --ELTLADG--SQLTGRI 117


>gi|227499285|ref|ZP_03929397.1| protein of hypothetical function DUF150 [Anaerococcus tetradius
           ATCC 35098]
 gi|227218636|gb|EEI83870.1| protein of hypothetical function DUF150 [Anaerococcus tetradius
           ATCC 35098]
          Length = 147

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  + +  IE M +  V I     KN  +L  F+   +G +T+ DCE+ S  + 
Sbjct: 1   MNLTNRLKEIFERDIESMGYELVDIEFKGGKNNKVLTFFIYNKEG-ITIEDCEKASAFLD 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             LD  +II+  Y LEVSS  + RP+    D  R    ++  ++
Sbjct: 60  TKLDEIDIIKDSYYLEVSSQDLSRPLKTDRDLERNKDELLKVKL 103


>gi|227890228|ref|ZP_04008033.1| protein of hypothetical function DUF150 [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849230|gb|EEJ59316.1| protein of hypothetical function DUF150 [Lactobacillus johnsonii
           ATCC 33200]
          Length = 172

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S  LD  
Sbjct: 22  VADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVSEKLDEL 81

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             +     Y LE+SSPG++RP+  + D+ R  G  +
Sbjct: 82  DPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYI 117


>gi|72161179|ref|YP_288836.1| hypothetical protein Tfu_0775 [Thermobifida fusca YX]
 gi|91208371|sp|Q47RV4|RIMP_THEFY RecName: Full=Ribosome maturation factor rimP
 gi|71914911|gb|AAZ54813.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 157

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 9/99 (9%)

Query: 71  ELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E+SQ IS  LD V+ + +  Y LEV+SPG+DRP+     + R  G +V   +V       
Sbjct: 56  EVSQKISTALDEVDVMGQSPYVLEVTSPGVDRPLTEPRHWRRARGRLVHAPLVAGG---- 111

Query: 130 KLIGKIMGTSETGFFLEKEKRGE----KDMNELQIAISF 164
           ++ G+++   ETG   + + + +     D+   ++ + F
Sbjct: 112 QVKGRVIDADETGVTFDVDGQSQVYAFSDLGRGKVQVEF 150


>gi|240172758|ref|ZP_04751417.1| hypothetical protein MkanA1_25812 [Mycobacterium kansasii ATCC
           12478]
          Length = 177

 Score = 45.1 bits (105), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           D  + L     LS++ S +LD  + I   Y LEVSSPG++RP+  +  F R  G     +
Sbjct: 47  DTALDLDTIAALSRSASALLDGLDAIRDKYVLEVSSPGVERPLTSEKHFRRARGR----K 102

Query: 121 IVLSSGDKQKLIGKI 135
           I L+  D  +L G++
Sbjct: 103 IELTLADGSRLTGRV 117


>gi|297206127|ref|ZP_06923522.1| protein of hypothetical function DUF150 [Lactobacillus jensenii
           JV-V16]
 gi|297149253|gb|EFH29551.1| protein of hypothetical function DUF150 [Lactobacillus jensenii
           JV-V16]
          Length = 169

 Score = 44.7 bits (104), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ P+ E+     V +  ++EKN   L+I+V+R +  + + +   LS+ +S  LD  
Sbjct: 19  VTDLVTPLAEKRGDELVDVEYVKEKNQYYLRIYVDRGESGIDIEEIAALSEIVSEELDKL 78

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV-----VAC 119
           N       Y LE+SSPG++RP+  + D   WN  +     VAC
Sbjct: 79  NPDPFTEPYMLELSSPGLERPIKNERD---WNKALNKYIHVAC 118


>gi|116629467|ref|YP_814639.1| hypothetical protein LGAS_0810 [Lactobacillus gasseri ATCC 33323]
 gi|116095049|gb|ABJ60201.1| hypothetical protein LGAS_0810 [Lactobacillus gasseri ATCC 33323]
          Length = 172

 Score = 44.7 bits (104), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S  LD  
Sbjct: 22  VADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVSEKLDEL 81

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             +     Y LE+SSPG++RP+  + D+ R  G  +
Sbjct: 82  DPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYI 117


>gi|226226959|ref|YP_002761065.1| hypothetical protein GAU_1553 [Gemmatimonas aurantiaca T-27]
 gi|259585777|sp|C1A8N5|RIMP_GEMAT RecName: Full=Ribosome maturation factor rimP
 gi|226090150|dbj|BAH38595.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 155

 Score = 44.7 bits (104), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 8/123 (6%)

Query: 52  LLQIFVER-DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           +L+I ++R D+  +T+ DC  +S+A+   L+   ++   Y LEVSSPG DRP+   +D+ 
Sbjct: 33  VLEIRIDRRDEEKVTIDDCARVSRALEARLEAAALVGEQYVLEVSSPGADRPLRHAADWR 92

Query: 111 RWNGHVVACEIVLSSGDKQKL-IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
           R+ G        L +G KQ++ I  + G       L ++ +G       ++++    +  
Sbjct: 93  RFVGRRATVTSGLLAGGKQEVEIVAVTGEGGAEVALVRDPKGR------EVSVPLREVSQ 146

Query: 170 ARL 172
           ARL
Sbjct: 147 ARL 149


>gi|116669974|ref|YP_830907.1| hypothetical protein Arth_1413 [Arthrobacter sp. FB24]
 gi|259585698|sp|A0JUT7|RIMP_ARTS2 RecName: Full=Ribosome maturation factor rimP
 gi|116610083|gb|ABK02807.1| protein of unknown function DUF150 [Arthrobacter sp. FB24]
          Length = 205

 Score = 44.7 bits (104), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 50  NLLLQIFV---ERDDGNMTLRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVR 105
           N ++ + V   + + G ++L    E+S+ +S ILD +   +   Y LEVSSPG+ RP+  
Sbjct: 57  NRVVHVVVDLPQEETGGVSLDVIAEISKELSGILDGDPSYDSRPYDLEVSSPGVGRPLTE 116

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ---IAI 162
              + R  G +V   ++      + L G+I    + G  L  E   +K M   Q     I
Sbjct: 117 PRHWHRARGRMVKVNVIQG----ENLTGRIQSVDDDGVTLVPEIAAKKGMKPKQGEPEKI 172

Query: 163 SFDSLLSARL 172
            FD + + ++
Sbjct: 173 PFDRIRNGKV 182


>gi|257439269|ref|ZP_05615024.1| protein associated with NUS operon [Faecalibacterium prausnitzii
           A2-165]
 gi|257198311|gb|EEU96595.1| protein associated with NUS operon [Faecalibacterium prausnitzii
           A2-165]
          Length = 163

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRD-CEELSQAISPI 79
           A  + ++++P +E M  R   +   +E  +  L++ +++ DG     D C ++S A+ PI
Sbjct: 10  AQRVEALVRPTVEGMGLRLWDVVFEKEGPDWYLRVLIDKTDGTTMDTDTCADVSHALDPI 69

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           LD  + IE  Y LEV SPG+ R + R   +    G  V+  +
Sbjct: 70  LDEADPIEQSYYLEVGSPGLGRKLTRPEHYEAVQGQKVSVRL 111


>gi|291279909|ref|YP_003496744.1| hypothetical protein DEFDS_1528 [Deferribacter desulfuricans SSM1]
 gi|290754611|dbj|BAI80988.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 158

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE-GHYRLEVSSPGIDRPMVR 105
           E+   +L+IF+E D  N+ L DC  +S+ +S  LD  +II   +Y LEVS+PG  R +  
Sbjct: 35  EKSGWVLRIFIEGD--NVGLSDCISVSKQVSKWLDEVDIIPYENYNLEVSTPGATREIRN 92

Query: 106 KSDFLRWNGHVVACEIVLSSGDK 128
             +F ++ G    C+I L   DK
Sbjct: 93  LDEFKKYIGK--YCKIKLVEHDK 113


>gi|195977580|ref|YP_002122824.1| hypothetical protein Sez_0439 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|259586200|sp|B4U1E4|RIMP_STREM RecName: Full=Ribosome maturation factor rimP
 gi|195974285|gb|ACG61811.1| hypothetical protein Sez_0439 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 127

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPM 103
           + +L I V++  G +T+ D  EL++ ISP+LD    +     Y LEVSSPG++RP+
Sbjct: 4   DYVLSILVDKASG-ITVEDTAELTELISPLLDTISPDPFPDQYMLEVSSPGLERPL 58


>gi|256851260|ref|ZP_05556649.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260660684|ref|ZP_05861599.1| UPF0090 protein [Lactobacillus jensenii 115-3-CHN]
 gi|282934728|ref|ZP_06339971.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
 gi|256616322|gb|EEU21510.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260548406|gb|EEX24381.1| UPF0090 protein [Lactobacillus jensenii 115-3-CHN]
 gi|281301303|gb|EFA93604.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 158

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ P+ E+     V +  ++EKN   L+I+V+R +  + + +   LS+ +S  LD  
Sbjct: 8   VTDLVTPLAEKRGDELVDVEYVKEKNQYYLRIYVDRGESGIDIEEIAALSEIVSEELDKL 67

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV-----VAC 119
           N       Y LE+SSPG++RP+  + D   WN  +     VAC
Sbjct: 68  NPDPFTEPYMLELSSPGLERPIKNERD---WNKALNKYIHVAC 107


>gi|320528333|ref|ZP_08029495.1| hypothetical protein HMPREF9430_01620 [Solobacterium moorei F0204]
 gi|320131247|gb|EFW23815.1| hypothetical protein HMPREF9430_01620 [Solobacterium moorei F0204]
          Length = 153

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ + QPV +E   R  +I  L  EK L  Q+ ++ D   + L  C E+S+ +  +LD  
Sbjct: 7   LTKLFQPVFDECHVRLYEIVWLGNEKTL--QVAIDNDAHAIDLDICAEVSEKLGVVLDKY 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + I+  Y LEV SPG +R +   ++F
Sbjct: 65  DPIKEEYSLEVCSPGAEREIKDYAEF 90


>gi|89900916|ref|YP_523387.1| hypothetical protein Rfer_2132 [Rhodoferax ferrireducens T118]
 gi|122479183|sp|Q21WJ7|RIMP_RHOFD RecName: Full=Ribosome maturation factor rimP
 gi|89345653|gb|ABD69856.1| protein of unknown function DUF150 [Rhodoferax ferrireducens T118]
          Length = 204

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 2/52 (3%)

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           +T+ DCE++++ +   L+V+ +   + RLEVSSPGIDRP+    DF R+ G 
Sbjct: 50  VTVEDCEKVTRQLLFALEVDGV--DYKRLEVSSPGIDRPLRHGQDFERFVGR 99


>gi|323340012|ref|ZP_08080278.1| protein of hypothetical function DUF150 [Lactobacillus ruminis ATCC
           25644]
 gi|323092518|gb|EFZ35124.1| protein of hypothetical function DUF150 [Lactobacillus ruminis ATCC
           25644]
          Length = 157

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 4/90 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ P+++E  F  V    ++E K+  L+I++++  G + + +C  +S  +   LD  
Sbjct: 8   VTELVTPILDERHFELVDAEFVKEGKSWYLRIYIDKP-GGINIEECALVSDLLGEKLDNC 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
             + I   Y LEVSSPG +RP+ ++ D+ R
Sbjct: 67  DPDPIPQAYFLEVSSPGAERPLKKERDYER 96


>gi|326692689|ref|ZP_08229694.1| hypothetical protein LargK3_02896 [Leuconostoc argentinum KCTC
           3773]
          Length = 158

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 8/129 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGN-MTLRDCEELSQAISPILD 81
           +I+++I P++ E +     ++  +E    +L+I V++ D   +T+ D  + +QA++ +LD
Sbjct: 8   EITALITPILVEQNDLLWDLTYTKEGGQKVLRIMVDKPDHTFITMADITDFTQAVNDLLD 67

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRW---NGHVVACEIVLSSGDKQKLIGKIM 136
               + I   Y L++SSPG DRP+ +   + +W       +   +  +   ++K  GK+ 
Sbjct: 68  TVEPDPIPEAYLLDISSPGADRPLKQPWHY-KWAQEADETILVALFAAKDGQKKWQGKVK 126

Query: 137 GTSETGFFL 145
             ++ G  L
Sbjct: 127 SVTDDGIVL 135


>gi|291298940|ref|YP_003510218.1| hypothetical protein Snas_1418 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568160|gb|ADD41125.1| protein of unknown function DUF150 [Stackebrandtia nassauensis DSM
           44728]
          Length = 162

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 7/103 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I +V++PV+ E  +   ++ + +  +  L+++ V+RD G + L     +S+ +S  LD  
Sbjct: 9   ILAVLEPVLAEAGYDLEELKVSQAGRRTLVRVLVDRDAG-VDLDAIASVSRVLSKALDKS 67

Query: 84  NIIEG-----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
              +G      Y LEVSSPG+DRP+     + R  G +V+  +
Sbjct: 68  EADDGPFATNSYTLEVSSPGVDRPLTLPRHWRRNVGRLVSVRL 110


>gi|118617679|ref|YP_906011.1| hypothetical protein MUL_2119 [Mycobacterium ulcerans Agy99]
 gi|166987594|sp|A0PQC1|RIMP_MYCUA RecName: Full=Ribosome maturation factor rimP
 gi|118569789|gb|ABL04540.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 177

 Score = 44.3 bits (103), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 8/78 (10%)

Query: 61  DGNMTLRDCEE---LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           DG+ TL D +    LS++ S +LD  + I   Y LEVSSPGIDRP+  +  F R  G  V
Sbjct: 45  DGDTTL-DLDTIAVLSRSASSLLDSLDNIGDSYVLEVSSPGIDRPLTSEKHFRRARGPKV 103

Query: 118 ACEIVLSSGDKQKLIGKI 135
             E+ L+ G   +L G+I
Sbjct: 104 --ELTLADG--SQLTGRI 117


>gi|259016315|sp|Q8DHL1|RIMP_THEEB RecName: Full=Ribosome maturation factor rimP
          Length = 157

 Score = 44.3 bits (103), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 1/118 (0%)

Query: 34  EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLE 93
           E +   SVQ  L  +   +L++ V   + + +L DCE LS+A+   LD     E  Y LE
Sbjct: 21  EHLDLVSVQW-LTHQSPPILRVEVRHPENDTSLEDCERLSRALEMALDELPEFEFAYVLE 79

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           VSSPG+   +    DF  + G  V          K    G ++   E   +L +  R 
Sbjct: 80  VSSPGLSDYLSSDRDFDAFRGFPVRVTTTAPHRGKTLWEGNLIRRDEVNVYLNQRGRS 137


>gi|251783185|ref|YP_002997490.1| hypothetical protein SDEG_1793 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391817|dbj|BAH82276.1| hypothetical protein SDEG_1793 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 149

 Score = 44.3 bits (103), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPM 103
           + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+
Sbjct: 26  DYVLSILVDKE-GGITVEDTSDLTDIISPLLDTITPDPFPDQYMLEVSSPGLERPL 80


>gi|22299481|ref|NP_682728.1| hypothetical protein tll1938 [Thermosynechococcus elongatus BP-1]
 gi|22295664|dbj|BAC09490.1| tll1938 [Thermosynechococcus elongatus BP-1]
          Length = 168

 Score = 44.3 bits (103), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 1/118 (0%)

Query: 34  EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLE 93
           E +   SVQ  L  +   +L++ V   + + +L DCE LS+A+   LD     E  Y LE
Sbjct: 32  EHLDLVSVQW-LTHQSPPILRVEVRHPENDTSLEDCERLSRALEMALDELPEFEFAYVLE 90

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           VSSPG+   +    DF  + G  V          K    G ++   E   +L +  R 
Sbjct: 91  VSSPGLSDYLSSDRDFDAFRGFPVRVTTTAPHRGKTLWEGNLIRRDEVNVYLNQRGRS 148


>gi|323127912|gb|ADX25209.1| hypothetical protein SDE12394_08865 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 127

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPM 103
           + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+
Sbjct: 4   DYVLSILVDKE-GGITVEDTSDLTDIISPLLDTITPDPFPDQYMLEVSSPGLERPL 58


>gi|322412489|gb|EFY03397.1| hypothetical protein SDD27957_08990 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 127

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPM 103
           + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+
Sbjct: 4   DYVLSILVDKE-GGITVEDTSDLTDIISPLLDTITPDPFPDQYMLEVSSPGLERPL 58


>gi|42519363|ref|NP_965293.1| hypothetical protein LJ1491 [Lactobacillus johnsonii NCC 533]
 gi|51316714|sp|Q74IS4|RIMP_LACJO RecName: Full=Ribosome maturation factor rimP
 gi|41583651|gb|AAS09259.1| hypothetical protein LJ_1491 [Lactobacillus johnsonii NCC 533]
          Length = 158

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S  LD  
Sbjct: 8   VADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVSEKLDEL 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             +     Y LE+SSPG++RP+  + D+ R  G  +
Sbjct: 68  DPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYI 103


>gi|329947838|ref|ZP_08294770.1| hypothetical protein HMPREF9056_02685 [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328523462|gb|EGF50560.1| hypothetical protein HMPREF9056_02685 [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 165

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG--NMT 65
           + ++PR   D  LA  ++ ++ PV+ +       +      +  ++++FV+  DG  ++ 
Sbjct: 2   AAHDPRKRSD-ALARSLTDLLAPVVADAGLHLEAVETTRAGRYSVVRVFVDLADGPGDLD 60

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           +     ++ A+S  LD  + ++G Y LEVS+PG +R +     F R  GH
Sbjct: 61  IDTLGPVTAAVSQALDESDPVKGQYTLEVSTPGAERELSTLRHFRRAVGH 110


>gi|238852617|ref|ZP_04643027.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
 gi|282850816|ref|ZP_06260190.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
 gi|311110886|ref|ZP_07712283.1| SP14.3 protein [Lactobacillus gasseri MV-22]
 gi|259585807|sp|Q044C1|RIMP_LACGA RecName: Full=Ribosome maturation factor rimP
 gi|238834763|gb|EEQ26990.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
 gi|282557768|gb|EFB63356.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
 gi|311066040|gb|EFQ46380.1| SP14.3 protein [Lactobacillus gasseri MV-22]
          Length = 158

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S  LD  
Sbjct: 8   VADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVSEKLDEL 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             +     Y LE+SSPG++RP+  + D+ R  G  +
Sbjct: 68  DPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYI 103


>gi|329667118|gb|AEB93066.1| hypothetical protein LJP_0738 [Lactobacillus johnsonii DPC 6026]
          Length = 158

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S  LD  
Sbjct: 8   VADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVSEKLDEL 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             +     Y LE+SSPG++RP+  + D+ R  G  +
Sbjct: 68  DPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYI 103


>gi|302528543|ref|ZP_07280885.1| UPF0090 protein [Streptomyces sp. AA4]
 gi|302437438|gb|EFL09254.1| UPF0090 protein [Streptomyces sp. AA4]
          Length = 175

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 38/55 (69%), Gaps = 2/55 (3%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDV-ENIIEGHYRLEVSSPGIDRPMVR 105
           L+++ V+ DDG + L +  E+S+ +S  LD  E+++   Y LEV+SPG+DRP+ +
Sbjct: 40  LVKVVVDSDDG-VGLDEVAEVSRTVSAALDENEHVLASAYTLEVTSPGLDRPLTQ 93


>gi|269795642|ref|YP_003315097.1| hypothetical protein Sked_23480 [Sanguibacter keddieii DSM 10542]
 gi|269097827|gb|ACZ22263.1| uncharacterized conserved protein [Sanguibacter keddieii DSM 10542]
          Length = 181

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 4/106 (3%)

Query: 21  LAGDISSVIQPVIEE--MSFRSVQISLLEEKNLLLQIF--VERDDGNMTLRDCEELSQAI 76
           +A  ++  ++P +E   +    VQ++    + ++  +    E   G + L    E+S+ I
Sbjct: 6   IAEQVADAVRPGVESAGLVLEDVQVAPAGARTVVRVVLDLTEDQTGALGLDQVAEVSRVI 65

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           S  LD    + G + LEV+SPG  RP+     F R    +VA  +V
Sbjct: 66  SDTLDTLPALPGKFTLEVTSPGTSRPLTELRHFKRARTRLVAVTLV 111


>gi|308233944|ref|ZP_07664681.1| hypothetical protein AvagD15_02782 [Atopobium vaginae DSM 15829]
 gi|328943956|ref|ZP_08241421.1| hypothetical protein HMPREF0091_10646 [Atopobium vaginae DSM 15829]
 gi|327491925|gb|EGF23699.1| hypothetical protein HMPREF0091_10646 [Atopobium vaginae DSM 15829]
          Length = 156

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            +TL +    S+ I+ +LD  + I+  Y LEVSSPG+ RP+ R  DF R+ G  V  E+V
Sbjct: 52  TITLDEVAAQSEWINEVLDSLDPIDSSYTLEVSSPGLARPLRRIHDFERFCGQEV--ELV 109

Query: 123 LSSGD-KQKLIGKIMGTSETGFFL 145
             + + +++  GK+       F L
Sbjct: 110 TRALEGRKRFTGKLSSVEGNTFTL 133


>gi|154509103|ref|ZP_02044745.1| hypothetical protein ACTODO_01620 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798737|gb|EDN81157.1| hypothetical protein ACTODO_01620 [Actinomyces odontolyticus ATCC
           17982]
          Length = 156

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 14/123 (11%)

Query: 52  LLQIFVERD--DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LL++ VE     G +      ++S+A+S  LDV + I+G Y LEVS+PG +R + +   +
Sbjct: 38  LLRVIVEAPIGAGGIDSDTLADVSRAVSKALDVADPIDGEYLLEVSTPGAERELTKVGHW 97

Query: 110 LRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE------KDMNELQIAIS 163
           +R  G +V   I L +G    + G+++  +ET   ++ +  GE      +DM + +  + 
Sbjct: 98  MRQIGRLV--RIKLRAG--GYVSGRVVAANETSATIDVD--GETTIIDYQDMRKARSRVD 151

Query: 164 FDS 166
           F S
Sbjct: 152 FGS 154


>gi|289643648|ref|ZP_06475761.1| protein of unknown function DUF150 [Frankia symbiont of Datisca
           glomerata]
 gi|289506539|gb|EFD27525.1| protein of unknown function DUF150 [Frankia symbiont of Datisca
           glomerata]
          Length = 221

 Score = 43.9 bits (102), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 12/78 (15%)

Query: 71  ELSQAISPILDVENI--------IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           E S+  S +LD            + G Y LEVSSPG+DRP+V    + R  G +V+    
Sbjct: 82  EASRVASAVLDAAETDPAAGDPPLAGPYVLEVSSPGVDRPLVAPRHWHRARGRLVS---- 137

Query: 123 LSSGDKQKLIGKIMGTSE 140
           + + D ++L+G++  T E
Sbjct: 138 VRTRDGRELLGRVRATDE 155


>gi|218282330|ref|ZP_03488620.1| hypothetical protein EUBIFOR_01202 [Eubacterium biforme DSM 3989]
 gi|218216703|gb|EEC90241.1| hypothetical protein EUBIFOR_01202 [Eubacterium biforme DSM 3989]
          Length = 173

 Score = 43.9 bits (102), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           LL++ VE++DG M L  C   S  I  +LD ++     Y LEV SPG +R +    +  R
Sbjct: 53  LLRVSVEKEDGTMDLDTCASCSDVIGQMLDEKDWYSHEYMLEVCSPGAERELRTDEEVQR 112

Query: 112 WNGHVV 117
             G  V
Sbjct: 113 AVGKYV 118


>gi|238854743|ref|ZP_04645073.1| conserved hypothetical protein [Lactobacillus jensenii 269-3]
 gi|260663975|ref|ZP_05864828.1| conserved hypothetical protein [Lactobacillus jensenii SJ-7A-US]
 gi|282932866|ref|ZP_06338263.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
 gi|313472266|ref|ZP_07812758.1| SP14.3 protein [Lactobacillus jensenii 1153]
 gi|238832533|gb|EEQ24840.1| conserved hypothetical protein [Lactobacillus jensenii 269-3]
 gi|239529662|gb|EEQ68663.1| SP14.3 protein [Lactobacillus jensenii 1153]
 gi|260561861|gb|EEX27830.1| conserved hypothetical protein [Lactobacillus jensenii SJ-7A-US]
 gi|281302901|gb|EFA95106.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 158

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 5/100 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +++++ P+ E+     V +  ++E+N   L+I+V+R +  + + +   LS+ +S  LD  
Sbjct: 8   VTNLVSPIAEKRGDELVDVEYVKEQNQYYLRIYVDRGESGIDIEEIAALSEMVSEELDKL 67

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRW-NGHV-VAC 119
           N       Y LE+SSPG++RP+  + D+ +  N ++ VAC
Sbjct: 68  NPDPFTEPYMLELSSPGLERPIKNERDWEKAVNKYIHVAC 107


>gi|269215360|ref|ZP_06159214.1| hypothetical protein HMPREF0762_00005 [Slackia exigua ATCC 700122]
 gi|269131216|gb|EEZ62290.1| hypothetical protein HMPREF0762_00005 [Slackia exigua ATCC 700122]
          Length = 157

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K   ++++++ + G +   D       I+ ILD  +   G Y LEVSSPGIDRP+  +  
Sbjct: 34  KAPTIRVYIDTEQG-IVFDDIAAAQAWINEILDEIDPFPGAYTLEVSSPGIDRPLRTRGH 92

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           F    G  V          + +  G ++G +E G
Sbjct: 93  FEAAVGEQVYATCSEPVDGRSRFSGTLLGVAEDG 126


>gi|205373421|ref|ZP_03226225.1| hypothetical protein Bcoam_09030 [Bacillus coahuilensis m4-4]
          Length = 112

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           ++L++++++D G + + +C  +S+ +   +D  + I+ +Y LEVSSPG +RP+ ++ DF 
Sbjct: 1   MVLRVYIDKDAG-VDIEECGIVSERLGEKIDELDPIQHNYFLEVSSPGAERPLKKEKDFE 59

Query: 111 RWNGHVV 117
           +  G  V
Sbjct: 60  KAVGKQV 66


>gi|328479977|gb|EGF49014.1| hypothetical protein AAULR_12702 [Lactobacillus rhamnosus MTCC
           5462]
          Length = 119

 Score = 43.9 bits (102), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 62  GNMTLRDCEELSQAISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           G +TL +C  +S+A+S  LD  N   I   Y LEVSSPG +RP+ R++D+ +  G  +
Sbjct: 7   GGITLDECVLVSEALSEQLDAINPDPIPQQYFLEVSSPGAERPLKRETDYEQAIGDYI 64


>gi|269219600|ref|ZP_06163454.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210842|gb|EEZ77182.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 160

 Score = 43.5 bits (101), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 49  KNLLLQIFVE--RDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           KNL++++ V+     G +      E+S+ IS  LD  ++++G Y LEVS+PG +R +   
Sbjct: 30  KNLVVKVVVDLPSGPGGVDSDRLTEVSRDISQRLDDVDLVQGAYTLEVSTPGAERSLREP 89

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
             F R  G +V    V    D + ++G+++  S     ++ E
Sbjct: 90  RHFSRAQGRLVELRTV----DGKSVVGRLVSLSGDALNVQVE 127


>gi|293192165|ref|ZP_06609377.1| hypothetical protein HMPREF0970_01722 [Actinomyces odontolyticus
           F0309]
 gi|292820361|gb|EFF79353.1| hypothetical protein HMPREF0970_01722 [Actinomyces odontolyticus
           F0309]
          Length = 156

 Score = 43.5 bits (101), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 14/123 (11%)

Query: 52  LLQIFVERD--DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           LL++ VE     G +      E+S+A+S  LD  + I+G Y LEVS+PG +R + +   +
Sbjct: 38  LLRVIVEAPIGAGGIDSDTLAEVSRAVSKALDAADPIDGEYLLEVSTPGAERELTKVGHW 97

Query: 110 LRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE------KDMNELQIAIS 163
           +R  G +V   I L +G    + G+++   ET   ++ +  GE      +DM + +  + 
Sbjct: 98  MRQIGRLV--RIKLRAG--GYVSGRVVAADETSATIDVD--GETTIIDYQDMRKARSRVD 151

Query: 164 FDS 166
           F S
Sbjct: 152 FGS 154


>gi|94985334|ref|YP_604698.1| hypothetical protein Dgeo_1233 [Deinococcus geothermalis DSM 11300]
 gi|259585747|sp|Q1IZ05|RIMP_DEIGD RecName: Full=Ribosome maturation factor rimP
 gi|94555615|gb|ABF45529.1| protein of unknown function DUF150 [Deinococcus geothermalis DSM
           11300]
          Length = 155

 Score = 43.5 bits (101), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 11/118 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           A ++ ++ + V++ + +  + + +    +  ++ I ++R D+  +T+ D E  S+A+   
Sbjct: 9   APNLRTLAEGVLQPLGYEVLDVQVQNPGRRPIVVIRMDRLDEQPVTVEDLETASRAVGAE 68

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDF---------LRWNGHVVACEIVLSSGDK 128
            D  + I G YRLE+ SPG  RP+ R   +         +R +GH     I    G++
Sbjct: 69  FDRVDPIAGEYRLELESPGAKRPLTRARHYERMLGLKARVRGDGHSFTAPIKAVDGEQ 126


>gi|303233384|ref|ZP_07320053.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
 gi|302480513|gb|EFL43604.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
          Length = 157

 Score = 43.5 bits (101), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQA---ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           ++++ ++  D ++     +E++Q    I+  LD  + IEG Y LEVSSPG+ RP+ +  D
Sbjct: 38  IIRLRIDNADESLPTISLDEVAQQHEWINATLDEMDPIEGSYTLEVSSPGLARPLRKHHD 97

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           F R+    V  +   + G +++  G++ G
Sbjct: 98  FERFAHETVQLQTNNTEG-RKRFSGELCG 125


>gi|259501584|ref|ZP_05744486.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|302191442|ref|ZP_07267696.1| hypothetical protein LineA_05504 [Lactobacillus iners AB-1]
 gi|309807190|ref|ZP_07701164.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
 gi|259167102|gb|EEW51597.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|308166411|gb|EFO68616.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
          Length = 158

 Score = 43.5 bits (101), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI- 85
           VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N  
Sbjct: 11  VITPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPD 70

Query: 86  -IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
            +   Y LE+SSPG++RP+  ++D+ +     V
Sbjct: 71  PLPDPYILELSSPGVERPIKTEADWCKAKNDYV 103


>gi|256396851|ref|YP_003118415.1| hypothetical protein Caci_7750 [Catenulispora acidiphila DSM 44928]
 gi|256363077|gb|ACU76574.1| protein of unknown function DUF150 [Catenulispora acidiphila DSM
           44928]
          Length = 203

 Score = 43.5 bits (101), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 10/146 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G A  + ++++PV+    +    + + +         V   D  ++L    ++++ +S +
Sbjct: 8   GPADRLQALLEPVVAAAGYDLESVRVSQVARRRRVEVVVDGDDGVSLDAVSDITRVVSDV 67

Query: 80  LDVENII----EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LD    +    E  Y LEV SPG DRP+     + R  G +V   ++ + GD   + G++
Sbjct: 68  LDAPEGVAVMGEQPYVLEVGSPGTDRPLTLPKHWRRAKGRLVRA-LLRNGGD---VTGRV 123

Query: 136 MGTSETGFFLE--KEKRGEKDMNELQ 159
           + + + G  LE   +K+G+ +   L+
Sbjct: 124 LDSDDEGVLLEVPGKKKGQTEERRLE 149


>gi|315653431|ref|ZP_07906353.1| protein of hypothetical function DUF150 [Lactobacillus iners ATCC
           55195]
 gi|315489356|gb|EFU78996.1| protein of hypothetical function DUF150 [Lactobacillus iners ATCC
           55195]
          Length = 158

 Score = 43.5 bits (101), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI- 85
           VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N  
Sbjct: 11  VITPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPD 70

Query: 86  -IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
            +   Y LE+SSPG++RP+  ++D+ +     V
Sbjct: 71  PLPDPYILELSSPGVERPIKTEADWCKAKNDYV 103


>gi|313676537|ref|YP_004054533.1| hypothetical protein Ftrac_2447 [Marivirga tractuosa DSM 4126]
 gi|312943235|gb|ADR22425.1| protein of unknown function DUF150 [Marivirga tractuosa DSM 4126]
          Length = 157

 Score = 43.5 bits (101), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           +GL   I + +  +I E  +  V I +     L + + ++ D+G +++  C  +S+ ++ 
Sbjct: 2   IGLDEKIKAYLGEIITEPQYFIVDIVISGNDKLKIVVLLDGDEG-VSIDYCASVSRQLAH 60

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
            ++ + ++E  Y LEVSSPG+D P+     +L+  G  V  +
Sbjct: 61  RMEEDEVLEKAYVLEVSSPGLDHPLTNLRQYLKNIGRKVKVD 102


>gi|111225122|ref|YP_715916.1| hypothetical protein FRAAL5763 [Frankia alni ACN14a]
 gi|111152654|emb|CAJ64395.1| Hypothetical protein FRAAL5763 [Frankia alni ACN14a]
          Length = 197

 Score = 43.5 bits (101), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 61  DGNMTLRDCEELSQAISPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           DG + L    E S+ +S +LD      E +  G Y LEV+SPG+DRP+     + R  G 
Sbjct: 4   DGGIDLDAVAEASRVVSDLLDAAEAAGEGLSAGPYVLEVTSPGVDRPLTAPRHWRRAVGR 63

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           +V   +  S+G  + L G+++   E G  L
Sbjct: 64  LVT--VRDSAG--EVLSGRVLSADEAGADL 89


>gi|312873335|ref|ZP_07733388.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d]
 gi|311091125|gb|EFQ49516.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d]
          Length = 158

 Score = 43.5 bits (101), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 3/87 (3%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI- 85
           VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N  
Sbjct: 11  VITPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPD 70

Query: 86  -IEGHYRLEVSSPGIDRPMVRKSDFLR 111
            +   Y LE+SSPG++RP+  ++D+ +
Sbjct: 71  PLPDPYILELSSPGVERPIKTEADWCK 97


>gi|284036132|ref|YP_003386062.1| hypothetical protein Slin_1213 [Spirosoma linguale DSM 74]
 gi|283815425|gb|ADB37263.1| protein of unknown function DUF150 [Spirosoma linguale DSM 74]
          Length = 170

 Score = 43.5 bits (101), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-DGNMTLRDCEELSQAISPILDVE 83
           I+ ++QP ++   F  V I +   +   L++ +  D D  +T+ DC ++S+ +   +D  
Sbjct: 7   ITELLQPYLKNDLFYIVDIQVAGRQGGRLKVTILLDSDAGITIDDCADISRRLGGQMDEM 66

Query: 84  NII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           N   +  + LE+SSPG+D P+     F+R  G 
Sbjct: 67  NFFGDSPFTLEISSPGVDYPLTFSRQFVRNVGR 99


>gi|312139327|ref|YP_004006663.1| hypothetical protein REQ_19140 [Rhodococcus equi 103S]
 gi|311888666|emb|CBH47978.1| conserved hypothetical protein [Rhodococcus equi 103S]
          Length = 181

 Score = 43.5 bits (101), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +++ V+ D G + L +   LS  IS + D   +  E  Y LEV+SPGIDRP+     + R
Sbjct: 30  VRVMVDSDSG-LELDEVARLSHVISDVFDAASDFGESPYTLEVTSPGIDRPLTEGRHWRR 88

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIA 161
             G  V  E+      ++ + G++   ++ G  L  + +G   +  +++A
Sbjct: 89  AQGRKVLVELA-----EESVTGRVGRLTDGGVDLVVKAKGGPVVRRVELA 133


>gi|317121852|ref|YP_004101855.1| hypothetical protein Tmar_1015 [Thermaerobacter marianensis DSM
           12885]
 gi|315591832|gb|ADU51128.1| protein of unknown function DUF150 [Thermaerobacter marianensis DSM
           12885]
          Length = 153

 Score = 43.1 bits (100), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106
           E +   LQ  V+R  G +T+ +C   SQA+ P+L     ++    +EV SPG+DR +   
Sbjct: 33  EGRRWFLQCVVDRP-GGVTMDECAAFSQALDPVLAGVEGLDEDVVVEVMSPGLDRTLRND 91

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
            +F  + G  V          +++ +G++ G  +    +  E+   +        I  D+
Sbjct: 92  REFDWFRGREVEVATFRPVEGRRRFVGRLEGLEDGDVVITDEEGAHR--------IPRDA 143

Query: 167 LLSARLIV 174
           +  A+L V
Sbjct: 144 VAKAQLYV 151


>gi|296111950|ref|YP_003622332.1| hypothetical protein LKI_09120 [Leuconostoc kimchii IMSNU 11154]
 gi|295833482|gb|ADG41363.1| hypothetical protein LKI_09120 [Leuconostoc kimchii IMSNU 11154]
          Length = 158

 Score = 43.1 bits (100), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 16/155 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDG-NMTLRDCEELSQAISPILDV 82
           I+ +I P++E+       +S   E    +L+I +++ +  ++T+ D  + +Q ++ +LD 
Sbjct: 9   ITVLITPIVEKRDKLLWDLSYTREGGQKVLRILLDKPNHESITMTDLTDFTQEVNELLDT 68

Query: 83  --ENIIEGHYRLEVSSPGIDRPMVRKSDFLRW---NGHVVACEIVLSSGDKQKLIGKIMG 137
              + I   Y L++SSPG DRP+++   F +W   +   V   + ++   ++K  G I  
Sbjct: 69  TDPDPIPEPYLLDISSPGADRPLIKPWHF-KWAQESEEEVLISLFVAKNGQKKWQGNISS 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            ++ G  L  E          ++ ++FD +  A L
Sbjct: 128 LTDDGLVLATEAD--------ELVLNFDEIAKAVL 154


>gi|25010486|ref|NP_734881.1| hypothetical protein gbs0413 [Streptococcus agalactiae NEM316]
 gi|50403657|sp|P62599|RIMP_STRA5 RecName: Full=Ribosome maturation factor rimP
 gi|50403658|sp|P62600|RIMP_STRA3 RecName: Full=Ribosome maturation factor rimP
 gi|23094839|emb|CAD46057.1| unknown [Streptococcus agalactiae NEM316]
          Length = 159

 Score = 43.1 bits (100), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 21/159 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           ++ V+ P I+   F  V +    EK   + +L I +++  G +T+ D  +L+  +SP+LD
Sbjct: 11  VTQVVTPAIQA-PFELVDVEY--EKMGGDYVLSILIDKP-GGITVEDTAQLTDVVSPLLD 66

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GKIM-- 136
               +     Y LEVSSPG++RP+          G  +   +   S DK K+  G ++  
Sbjct: 67  TIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSL-YKSIDKVKIFEGDLLSF 125

Query: 137 -GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + T  +++K +    D       I + ++  ARL V
Sbjct: 126 DGETLTIDYMDKTRHKTVD-------IPYQTVAKARLAV 157


>gi|119717417|ref|YP_924382.1| hypothetical protein Noca_3193 [Nocardioides sp. JS614]
 gi|166988630|sp|A1SLL0|RIMP_NOCSJ RecName: Full=Ribosome maturation factor rimP
 gi|119538078|gb|ABL82695.1| protein of unknown function DUF150 [Nocardioides sp. JS614]
          Length = 175

 Score = 43.1 bits (100), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           K  +L++ V++D G +TL +  E ++ ++ +LD   ++ E  Y LEV+S G+DRP+    
Sbjct: 38  KRRILRVAVDKD-GGVTLDEVAEATREVNRVLDGSEVMGEQPYTLEVTSRGVDRPLTLPR 96

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            + R  G +V     ++  D +   G+I+ ++E    L+
Sbjct: 97  HWRRNAGRLVK----VAFADGRAATGRILDSNEEQVTLD 131


>gi|309775436|ref|ZP_07670439.1| 15 kDa protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916825|gb|EFP62562.1| 15 kDa protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 183

 Score = 43.1 bits (100), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 33/57 (57%)

Query: 47  EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPM 103
           E K  +LQ+ +   DG+M +  C   S+ IS +LD  ++I   Y LEV SPG +R +
Sbjct: 58  EGKMRILQVSIMHKDGSMDIDTCAAQSEKISAMLDELDLISSEYFLEVCSPGAEREL 114


>gi|325676663|ref|ZP_08156338.1| hypothetical protein HMPREF0724_14121 [Rhodococcus equi ATCC 33707]
 gi|325552518|gb|EGD22205.1| hypothetical protein HMPREF0724_14121 [Rhodococcus equi ATCC 33707]
          Length = 189

 Score = 43.1 bits (100), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           +++ V+ D G + L +   LS  IS + D   +  E  Y LEV+SPGIDRP+     + R
Sbjct: 38  VRVMVDSDSG-LELDEVARLSHVISDVFDAASDFGESPYTLEVTSPGIDRPLTEGRHWRR 96

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIA 161
             G  V  E+      ++ + G++   ++ G  L  + +G   +  +++A
Sbjct: 97  AQGRKVLVELA-----EESVTGRVGRLTDGGVDLVVKAKGGPVVRRVELA 141


>gi|329919854|ref|ZP_08276792.1| hypothetical protein HMPREF9210_0185 [Lactobacillus iners SPIN
           1401G]
 gi|328936944|gb|EGG33374.1| hypothetical protein HMPREF9210_0185 [Lactobacillus iners SPIN
           1401G]
          Length = 158

 Score = 43.1 bits (100), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI- 85
           VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N  
Sbjct: 11  VITPLVHARGDELVDIEYVKENNQNYLRIYVDREPDGIDIDEIATLSESVSEQLDLINPD 70

Query: 86  -IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
            +   Y LE+SSPG++RP+  ++D+ +     V
Sbjct: 71  PLPDPYILELSSPGVERPIKTEADWCKAKNDYV 103


>gi|325282975|ref|YP_004255516.1| Ribosome maturation factor rimP [Deinococcus proteolyticus MRP]
 gi|324314784|gb|ADY25899.1| Ribosome maturation factor rimP [Deinococcus proteolyticus MRP]
          Length = 150

 Score = 43.1 bits (100), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%)

Query: 35  EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
           E     VQ+     + +LL      D+  +++ D E  ++ +S  LD  + I G YRLEV
Sbjct: 18  EYELLEVQMQNASGRPVLLVRIDRADEQPVSVDDIERATRRLSLWLDEADPIGGEYRLEV 77

Query: 95  SSPGIDRPMVRKSDFLRWNG 114
            SPG  RP++R   F R  G
Sbjct: 78  ESPGAKRPLLRTRHFERMLG 97


>gi|120403302|ref|YP_953131.1| hypothetical protein Mvan_2311 [Mycobacterium vanbaalenii PYR-1]
 gi|259585796|sp|A1T7H5|RIMP_MYCVP RecName: Full=Ribosome maturation factor rimP
 gi|119956120|gb|ABM13125.1| protein of unknown function DUF150 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 176

 Score = 42.7 bits (99), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 7/101 (6%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           D  + L    ELS+  S +LD   +    Y LEV+SPG+DRP+  +  + R  G +   E
Sbjct: 50  DHGLDLDSVAELSRIASELLD--GLDSAPYVLEVTSPGVDRPLTTEKHYRRARGRL--AE 105

Query: 121 IVLSSGDKQKLIGKIMGTSE-TGFFLEKEKRGEKDMNELQI 160
           I L+ G    L G+I G ++ T   + +E R    + E+ +
Sbjct: 106 ITLTDG--SVLTGRIGGVADGTVGVVVREGRSNLSVREIAL 144


>gi|239907794|ref|YP_002954535.1| hypothetical protein DMR_31580 [Desulfovibrio magneticus RS-1]
 gi|239797660|dbj|BAH76649.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 189

 Score = 42.7 bits (99), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            +T+ +C  +S+ +  +L+V+ I    Y LEVSSPG+ R        L + G  +  ++ 
Sbjct: 58  GVTIDECARVSRHLGALLEVDEIFHNPYVLEVSSPGLSRRFFEAGQLLAYVGREIEAKLA 117

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
           +    +++  G + G S+    +        D    + +ISFD
Sbjct: 118 VPREGRKRFKGILSGVSDQTVSM------TVDPGAKEFSISFD 154


>gi|325957050|ref|YP_004292462.1| ribosome maturation protein RimP [Lactobacillus acidophilus 30SC]
 gi|325333615|gb|ADZ07523.1| ribosome maturation protein RimP [Lactobacillus acidophilus 30SC]
 gi|327183773|gb|AEA32220.1| ribosome maturation protein RimP [Lactobacillus amylovorus GRL
           1118]
          Length = 158

 Score = 42.7 bits (99), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  V++P+I+E     V +  ++EK    L+I+V+R+   + + +   LS+ +S  LD  
Sbjct: 8   VRPVVEPIIDEHGDMLVDMEYVKEKGQNYLRIYVDREPNGIDIDEIAALSELVSEKLDTI 67

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           N       Y LE+SSPG +RP+  ++D+ +     +   +     DK+   G +   ++ 
Sbjct: 68  NPDPFPEPYVLELSSPGAERPIKTEADWKKALNDYIHIGLYQKIKDKKVYEGTLKSYNDE 127

Query: 142 GFFLE 146
              LE
Sbjct: 128 EIVLE 132


>gi|320334651|ref|YP_004171362.1| ribosome maturation factor rimP [Deinococcus maricopensis DSM
           21211]
 gi|319755940|gb|ADV67697.1| Ribosome maturation factor rimP [Deinococcus maricopensis DSM
           21211]
          Length = 147

 Score = 42.7 bits (99), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF---------L 110
           D+  +T+ D E  S+ +   LD  + I+G YRLE+ SPG  RP+ R   F         +
Sbjct: 41  DEQPVTVDDLETASKLLGLELDRTDPIKGEYRLELESPGSKRPLRRTRHFERMVGLKARV 100

Query: 111 RWNGHVVACEIVLSSGD 127
           R  GH     I+   GD
Sbjct: 101 RGEGHSFTAPILKVEGD 117


>gi|29829096|ref|NP_823730.1| hypothetical protein SAV_2554 [Streptomyces avermitilis MA-4680]
 gi|34223104|sp|Q82K50|RIMP_STRAW RecName: Full=Ribosome maturation factor rimP
 gi|29606202|dbj|BAC70265.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 169

 Score = 42.7 bits (99), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 8/127 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           +  +L++ V+ D+G   L    ++S+A+S  LD  + + EG Y LEV +PG +R +    
Sbjct: 34  RKRVLRVVVDSDEG-ADLDAIADVSRALSAKLDETDAMGEGEYTLEVGTPGAERALTEHR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
            ++R    +V  +  L+ GD  +L+ +I+   + G  LE    G K        ++F+ +
Sbjct: 93  HYVRAVDRLVRFQ--LTEGD--ELVARILTVDDAGLDLEVP--GVKGRKATTRRLAFEDI 146

Query: 168 LSARLIV 174
             AR+ V
Sbjct: 147 AKARVQV 153


>gi|225012170|ref|ZP_03702607.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-2A]
 gi|225003725|gb|EEG41698.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-2A]
          Length = 154

 Score = 42.7 bits (99), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 30/161 (18%)

Query: 36  MSFRSVQISLLE-----EKNLLL-----------QIFVERDDGNMTLRDCEELSQAISPI 79
           M+FRS   SLLE     +++L L            I ++ D G +TL+DC  +S+AI   
Sbjct: 1   MNFRSKVESLLEAALEEDQSLFLIDLKIGSDNSIHITLDGDQG-VTLKDCVNVSRAIEHN 59

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E   E  + LEV+S G+  P++    +++  G  +  E    S +   L G +    
Sbjct: 60  LDRE---EYDFSLEVASAGVGSPLLNSRQYIKNIGRKLRVE----SMEVSTLEGTLTAAD 112

Query: 140 ETGFFLEKEKRGEKDMNELQIAI------SFDSLLSARLIV 174
              F LE ++R  K + + ++ +      S+D +  A+++V
Sbjct: 113 NQAFTLEWKQREAKPVGKGKVTVTKQKTLSYDQISIAKVLV 153


>gi|296269041|ref|YP_003651673.1| hypothetical protein Tbis_1058 [Thermobispora bispora DSM 43833]
 gi|296091828|gb|ADG87780.1| protein of unknown function DUF150 [Thermobispora bispora DSM
           43833]
          Length = 171

 Score = 42.7 bits (99), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 5/129 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD- 81
           G +  ++ PV+E        +++       +   V   DG +T+ +  ++S+++S  LD 
Sbjct: 8   GRLVELLGPVVEAKGLDLEDVTITSAGRRRIVRVVVDRDGGVTVDEIADVSRSVSDRLDE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           V+ + +  Y LEV+SPG+DRP+  +  + R  G +V    VL  G    + G+I   +ET
Sbjct: 68  VDVLGDAPYVLEVTSPGVDRPLTEQRHWRRARGLLVKA--VLRDG--GTVEGRITDVTET 123

Query: 142 GFFLEKEKR 150
              L+  +R
Sbjct: 124 EVELDGTRR 132


>gi|148240412|ref|YP_001225799.1| hypothetical protein SynWH7803_2076 [Synechococcus sp. WH 7803]
 gi|166980273|sp|A5GNI7|RIMP_SYNPW RecName: Full=Ribosome maturation factor rimP
 gi|147848951|emb|CAK24502.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
          Length = 155

 Score = 42.4 bits (98), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 2/118 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  DI+ V         F  V+I +L   + + +Q+ + R DG +++L DC   S  +  
Sbjct: 5   LLPDITPVAASTAAAHGFELVEIQILTHLQPMTVQVQIRRTDGSDVSLDDCAGFSGPMGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            L+ + ++   Y LE+SSPGI   +    DF  +  + V        G +Q+  G ++
Sbjct: 65  ALESQALLTEAYVLEISSPGIGEQLQSDRDFQTFRSYPVEVLYRDDEGREQRQQGSLL 122


>gi|227904179|ref|ZP_04021984.1| protein of hypothetical function DUF150 [Lactobacillus acidophilus
           ATCC 4796]
 gi|227868198|gb|EEJ75619.1| protein of hypothetical function DUF150 [Lactobacillus acidophilus
           ATCC 4796]
          Length = 172

 Score = 42.4 bits (98), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++ +I+E     V +  ++EK+   L+I+V+R+   + + +   LS+ IS  LD  
Sbjct: 22  VRPVVESIIDEHGDMLVNMEYIKEKSQNYLRIYVDREPNGIDIDEIAVLSELISEKLDTL 81

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG +RP+  K+D+ +     +   +     DK+   G +   ++ 
Sbjct: 82  DPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIEDKKMYEGTLKSYNDD 141

Query: 142 GFFLE 146
              LE
Sbjct: 142 EIILE 146


>gi|229815166|ref|ZP_04445503.1| hypothetical protein COLINT_02212 [Collinsella intestinalis DSM
           13280]
 gi|229809396|gb|EEP45161.1| hypothetical protein COLINT_02212 [Collinsella intestinalis DSM
           13280]
          Length = 164

 Score = 42.4 bits (98), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 8/97 (8%)

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  ++  + I   Y LEVSSPG+ RP+ R SDF R+ G  V        G ++   G I
Sbjct: 63  VSETVEALDPISSAYTLEVSSPGMKRPLRRPSDFARFVGEDVELTTTAMEG-RRSYKGAI 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              ++    ++ E        E  + I+FD +    L
Sbjct: 122 AAATDACVTIQPE-------GEDAVTIAFDDVKKCAL 151


>gi|283769340|ref|ZP_06342239.1| conserved hypothetical protein [Bulleidia extructa W1219]
 gi|283103997|gb|EFC05381.1| conserved hypothetical protein [Bulleidia extructa W1219]
          Length = 150

 Score = 42.4 bits (98), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M    +I +++ P +++  F   +++ +  K   LQI V    G   L  C + S+ IS 
Sbjct: 1   MNRIDEIKALVVPALKKQGFEVEEVTWIS-KERTLQISVHNLQGETDLEACAKASECISD 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPM 103
           +LD  +++   Y LEV SPG +R +
Sbjct: 60  MLDENDLMLEGYTLEVCSPGAEREI 84


>gi|311898672|dbj|BAJ31080.1| hypothetical protein KSE_53040 [Kitasatospora setae KM-6054]
          Length = 184

 Score = 42.4 bits (98), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 23/144 (15%)

Query: 4   THFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN 63
           T  L +  EP +  D GL  D+  V   V +  S R VQI +               DG 
Sbjct: 6   TDRLRALLEP-LAADAGL--DLEEV--KVTQAGSRRQVQIDVDA-------------DGG 47

Query: 64  MTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
           + L    E S+ +S  LD   ++ E  Y LEV SPG +RP+     + R  G + A ++V
Sbjct: 48  VDLDAVAEFSRLVSRALDDSALMGETPYVLEVGSPGAERPLSEPRHWRRAVGRLAAVKLV 107

Query: 123 LSSGDKQKLIGKIMGTSETGFFLE 146
               D  +L  +++ + E G  +E
Sbjct: 108 ----DGAELTARVLESDEDGALVE 127


>gi|22536560|ref|NP_687411.1| hypothetical protein SAG0377 [Streptococcus agalactiae 2603V/R]
 gi|76786908|ref|YP_329097.1| hypothetical protein SAK_0451 [Streptococcus agalactiae A909]
 gi|76798054|ref|ZP_00780311.1| UPF0090 protein SP0552 (SP14.3) [Streptococcus agalactiae 18RS21]
 gi|77406351|ref|ZP_00783413.1| conserved hypotehtical protein [Streptococcus agalactiae H36B]
 gi|77408760|ref|ZP_00785490.1| conserved hypotehtical protein [Streptococcus agalactiae COH1]
 gi|77411665|ref|ZP_00788005.1| conserved hypotehtical protein [Streptococcus agalactiae CJB111]
 gi|77414448|ref|ZP_00790599.1| conserved hypotehtical protein [Streptococcus agalactiae 515]
 gi|91208361|sp|Q3K306|RIMP_STRA1 RecName: Full=Ribosome maturation factor rimP
 gi|22533394|gb|AAM99283.1|AE014208_23 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
 gi|76561965|gb|ABA44549.1| conserved hypothetical protein [Streptococcus agalactiae A909]
 gi|76586613|gb|EAO63114.1| UPF0090 protein SP0552 (SP14.3) [Streptococcus agalactiae 18RS21]
 gi|77159493|gb|EAO70653.1| conserved hypotehtical protein [Streptococcus agalactiae 515]
 gi|77162309|gb|EAO73280.1| conserved hypotehtical protein [Streptococcus agalactiae CJB111]
 gi|77172605|gb|EAO75744.1| conserved hypotehtical protein [Streptococcus agalactiae COH1]
 gi|77175020|gb|EAO77827.1| conserved hypotehtical protein [Streptococcus agalactiae H36B]
          Length = 127

 Score = 42.4 bits (98), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPM 103
           + +L I +++  G +T+ D  +L+  +SP+LD    +     Y LEVSSPG++RP+
Sbjct: 4   DYVLSILIDKP-GGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPL 58


>gi|318042327|ref|ZP_07974283.1| hypothetical protein SCB01_11489 [Synechococcus sp. CB0101]
          Length = 157

 Score = 42.4 bits (98), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 4/101 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           L  D+  +   V  +  F+   + LL  +    LL+Q+ +  D G+++L +C   S  + 
Sbjct: 5   LIPDLERLASQVAADAGFQVCGVQLLTHRIPMTLLVQLRLA-DGGDVSLDNCASFSGVLG 63

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
             L+   +IE  Y LE+SSPGI   +    DF  + G  V 
Sbjct: 64  EALEAAALIEDAYVLEISSPGIAETLNDDRDFRSFRGFPVC 104


>gi|315038576|ref|YP_004032144.1| hypothetical protein LA2_07130 [Lactobacillus amylovorus GRL 1112]
 gi|312276709|gb|ADQ59349.1| hypothetical protein LA2_07130 [Lactobacillus amylovorus GRL 1112]
          Length = 158

 Score = 42.4 bits (98), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  V++P+I+E     V +  ++EK    L+I+V+R+   + + +   LS+ +S  LD  
Sbjct: 8   VRPVVEPIIDEHGDMLVDMEYVKEKGQNYLRIYVDREPNGIDIDEIAALSELVSEKLDTI 67

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           N       Y LE+SSPG +RP+  ++D+ +     +   +     DK+   G +   ++ 
Sbjct: 68  NPDPFPEPYVLELSSPGAERPIKTEADWKKALNDYIHIGLYQKIMDKKVYEGTLKSYNDE 127

Query: 142 GFFLE 146
              LE
Sbjct: 128 EIVLE 132


>gi|116328715|ref|YP_798435.1| hypothetical protein LBL_2089 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330627|ref|YP_800345.1| hypothetical protein LBJ_0944 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281618|sp|Q04U33|RIMP_LEPBJ RecName: Full=Ribosome maturation factor rimP
 gi|122283500|sp|Q04ZJ3|RIMP_LEPBL RecName: Full=Ribosome maturation factor rimP
 gi|116121459|gb|ABJ79502.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124316|gb|ABJ75587.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 162

 Score = 42.4 bits (98), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 20/124 (16%)

Query: 62  GNMTLRDCEELSQA-------ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           G+++L +CE++S+        ISP LD        + L+VSS G +R +    D  R+ G
Sbjct: 48  GSVSLLECEQVSRKLKEELERISPDLD--------FTLKVSSAGAERKLHLPEDIDRFRG 99

Query: 115 HVVACEIVLSSGDKQKL---IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             +   +V  SG+ +K    I +I+       FLEK ++G+K   + Q  ++   +L   
Sbjct: 100 --IPVRLVFRSGESEKNQEGIFRIVNRDGDQVFLEKFQKGKKSAVKKQTTLNLKDILKGN 157

Query: 172 LIVT 175
           L V+
Sbjct: 158 LYVS 161


>gi|313897501|ref|ZP_07831044.1| conserved hypothetical protein [Clostridium sp. HGF2]
 gi|312957871|gb|EFR39496.1| conserved hypothetical protein [Clostridium sp. HGF2]
          Length = 155

 Score = 42.0 bits (97), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPM 103
           +LQ+ +   DG+M +  C   S+ IS +LD  ++I   Y LEV SPG +R +
Sbjct: 35  ILQVSIMHKDGSMDIDTCAAQSEKISTMLDEMDMIASEYFLEVCSPGAEREL 86


>gi|33862047|ref|NP_893608.1| hypothetical protein PMM1491 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|51316771|sp|Q7V002|RIMP_PROMP RecName: Full=Ribosome maturation factor rimP
 gi|33634265|emb|CAE19950.1| DUF150 [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
          Length = 155

 Score = 42.0 bits (97), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQ--IFVERDDGNMTLRDCEELSQA 75
           D     ++ S++Q V +E + +   + +L  +N ++   I  + +  ++TL DC   +  
Sbjct: 2   DKECKSNLESLLQGVAKEFNLKIHSLDILTNQNPIIVKIIICKTNKDDITLDDCSRFNNP 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
              +++  N++   Y LE+SS G+   +  + DF  + G  V  E+
Sbjct: 62  AISVIENSNLLNCSYVLEISSQGVSDELTSERDFKTFKGFPVNVEL 107


>gi|84498574|ref|ZP_00997337.1| hypothetical protein JNB_20318 [Janibacter sp. HTCC2649]
 gi|84381107|gb|EAP96992.1| hypothetical protein JNB_20318 [Janibacter sp. HTCC2649]
          Length = 187

 Score = 42.0 bits (97), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 5/75 (6%)

Query: 63  NMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           +++L +    +  +S  LD  +++ E  Y LEV+SPG+ RP+   S F R  G +V    
Sbjct: 56  SLSLDEIASATHTVSDALDESDVLGEQPYTLEVTSPGVSRPLTAASHFRRNVGRLV---- 111

Query: 122 VLSSGDKQKLIGKIM 136
           VL+  D + + G+I+
Sbjct: 112 VLTPQDGEPVTGRIV 126


>gi|260101366|ref|ZP_05751603.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|260084818|gb|EEW68938.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
          Length = 172

 Score = 42.0 bits (97), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 11/151 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  VI+ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S  LD  
Sbjct: 22  VRPVIETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVSEKLDTI 81

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +   +  
Sbjct: 82  DPDPLPDPYVLELSSPGAERPITTEADWKRALNDYVHIGLYQKIDDKKVYEGTLKYYNND 141

Query: 142 GFFLE-KEKRGEKDMN-------ELQIAISF 164
              LE K+K   K +        +++ AI F
Sbjct: 142 EIVLEVKDKTRRKKLTIPRKLIAKIRFAIEF 172


>gi|313901627|ref|ZP_07835064.1| protein of unknown function DUF150 [Thermaerobacter subterraneus
           DSM 13965]
 gi|313468108|gb|EFR63585.1| protein of unknown function DUF150 [Thermaerobacter subterraneus
           DSM 13965]
          Length = 153

 Score = 42.0 bits (97), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 2/114 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ + +P+ E+     + +    E     LQ  V+R+ G +T+ +C   S+A+ P+L+  
Sbjct: 10  VAQLAEPLAEQRGLVLLDVEYRREGGRWFLQCVVDRE-GGVTMDECAAFSEALDPVLEGV 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + +     +EV SPG+DR +    +F  + G  V          +++  G++ G
Sbjct: 69  DGLAEDVVVEVMSPGLDRTLRNDREFAWFRGREVEVTTYRPVDGRRRFQGRLEG 122


>gi|226306116|ref|YP_002766076.1| hypothetical protein RER_26290 [Rhodococcus erythropolis PR4]
 gi|259586185|sp|C0ZYA2|RIMP_RHOE4 RecName: Full=Ribosome maturation factor rimP
 gi|226185233|dbj|BAH33337.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 206

 Score = 42.0 bits (97), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKS 107
           K+  ++I V+ D G + L    E+S+ +S + D +E I E  Y LEV+SPGIDRP+  + 
Sbjct: 34  KHSAVRIMVDSDAG-IELDAAAEISRLVSELFDSLEEIGETPYTLEVTSPGIDRPLTLER 92

Query: 108 DFLRWNGH 115
            + R  G 
Sbjct: 93  HWRRARGR 100


>gi|193214184|ref|YP_001995383.1| hypothetical protein Ctha_0465 [Chloroherpeton thalassium ATCC
           35110]
 gi|259585751|sp|B3QUN0|RIMP_CHLT3 RecName: Full=Ribosome maturation factor rimP
 gi|193087661|gb|ACF12936.1| protein of unknown function DUF150 [Chloroherpeton thalassium ATCC
           35110]
          Length = 182

 Score = 42.0 bits (97), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILD----VENIIEGHYRLEVSSPGIDRPMVRKS 107
           ++++F + D G +++ +C+ LS+ IS  LD    ++ ++  H++L VSSPG+ RP+    
Sbjct: 47  IIEVFADTDSG-ISVENCKFLSKHISAELDASEEMQALLPRHFKLVVSSPGLSRPLTMNR 105

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            + +  G ++      + G+ + + G+ +   E
Sbjct: 106 QYKKNIGRLMQVTYQNADGEIKTIDGRFISLEE 138


>gi|123966904|ref|YP_001011985.1| hypothetical protein P9515_16711 [Prochlorococcus marinus str. MIT
           9515]
 gi|166980184|sp|A2BYL7|RIMP_PROM5 RecName: Full=Ribosome maturation factor rimP
 gi|123201270|gb|ABM72878.1| DUF150 [Prochlorococcus marinus str. MIT 9515]
          Length = 155

 Score = 42.0 bits (97), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 56/106 (52%), Gaps = 2/106 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN--LLLQIFVERDDGNMTLRDCEELSQA 75
           D  L  ++  +++ V +E + +   ++LL  +N  ++  I  + ++ ++T+ DC   +  
Sbjct: 2   DKELKNNLEILLEEVAKEFNLKVYSLNLLTNQNPIIIKIIIKKTNEEDITIEDCSRFNNP 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
            S +++  N+++  Y LE+SS G+   +  + DF  + G  V  E+
Sbjct: 62  ASAVIENSNLLKCSYVLEISSQGVSDELTSERDFKTFKGFPVNVEL 107


>gi|281491259|ref|YP_003353239.1| hypothetical protein LLKF_0783 [Lactococcus lactis subsp. lactis
           KF147]
 gi|281375000|gb|ADA64518.1| Hypothetical protein LLKF_0783 [Lactococcus lactis subsp. lactis
           KF147]
          Length = 157

 Score = 42.0 bits (97), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV---ENIIEGHYRLEVSSPGIDRPMVRK 106
           +++L I V+++ G + + +  ELS+ ISP+LD    +      Y LEV+SPG +RP+ + 
Sbjct: 33  DMMLSILVDKE-GGIEIDETAELSEIISPLLDTISPDPFPTEGYLLEVASPGAERPLRKA 91

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             F    G  +  ++     +++++ G ++
Sbjct: 92  EHFAGAVGEYIFVKLYQKINNEKEITGDLV 121


>gi|259645134|sp|A5GVG1|RIMP_SYNR3 RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 42.0 bits (97), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 53  LQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           L + V + DG ++ L DC   SQA    L+   ++ G Y LE++SPG+   + +  DF  
Sbjct: 38  LIVAVRKGDGSDVNLDDCASFSQAFGEALETGELLTGAYVLEITSPGLGDVLQQDRDFRS 97

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMG 137
           + G  V      + G + +  G ++G
Sbjct: 98  FRGFPVCVRQRDAKGGEIQREGTLLG 123


>gi|58337538|ref|YP_194123.1| hypothetical protein LBA1260 [Lactobacillus acidophilus NCFM]
 gi|75357528|sp|Q5FJN2|RIMP_LACAC RecName: Full=Ribosome maturation factor rimP
 gi|58254855|gb|AAV43092.1| hypothetical protein LBA1260 [Lactobacillus acidophilus NCFM]
          Length = 158

 Score = 42.0 bits (97), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 3/125 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++ +I+E     V +  ++EK+   L+I+V+R+   + + +   LS+ IS  LD  
Sbjct: 8   VRPVVESIIDEHGDMLVNMEYIKEKSQNYLRIYVDREPNGIDIDEIAVLSELISEKLDTL 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG +RP+  K+D+ +     +   +     DK+   G +   ++ 
Sbjct: 68  DPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIEDKKMYEGTLKSYNDD 127

Query: 142 GFFLE 146
              LE
Sbjct: 128 EIILE 132


>gi|226366089|ref|YP_002783872.1| hypothetical protein ROP_66800 [Rhodococcus opacus B4]
 gi|254806567|sp|C1B310|RIMP_RHOOB RecName: Full=Ribosome maturation factor rimP
 gi|226244579|dbj|BAH54927.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 190

 Score = 41.6 bits (96), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 46  LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMV 104
           L  K+  ++I V+ D G + L     LS  IS + D V +  E  Y LEV+SPGIDRP+ 
Sbjct: 31  LAGKHSAVRIMVDSDAG-LELDAVANLSHEISEVFDSVSDFGESPYTLEVTSPGIDRPLT 89

Query: 105 RKSDFLRWNG 114
            +  + R  G
Sbjct: 90  HERHWRRARG 99


>gi|15672745|ref|NP_266919.1| hypothetical protein L173151 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|34223137|sp|Q9CHG8|RIMP_LACLA RecName: Full=Ribosome maturation factor rimP
 gi|12723681|gb|AAK04861.1|AE006310_3 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406314|gb|ADZ63385.1| Ribosome maturation factor [Lactococcus lactis subsp. lactis CV56]
          Length = 157

 Score = 41.6 bits (96), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV---ENIIEGHYRLEVSSPGIDRPMVRK 106
           +++L I V+++ G + + +  ELS+ ISP+LD    +      Y LEV+SPG +RP+ + 
Sbjct: 33  DMMLSILVDKE-GGIEIDETAELSEIISPLLDTISPDPFPTEGYLLEVASPGAERPLRKA 91

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             F    G  +  ++     +++++ G ++
Sbjct: 92  EHFAGAVGEYIFVKLYQKINNEKEITGDLV 121


>gi|124022126|ref|YP_001016433.1| hypothetical protein P9303_04161 [Prochlorococcus marinus str. MIT
           9303]
 gi|167012912|sp|A2C6Q8|RIMP_PROM3 RecName: Full=Ribosome maturation factor rimP
 gi|123962412|gb|ABM77168.1| DUF150 [Prochlorococcus marinus str. MIT 9303]
          Length = 154

 Score = 41.6 bits (96), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 51  LLLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + +Q+ + R DG +++L DC   S ++   L+   +    Y LE+SSPGI   +    DF
Sbjct: 36  MTIQVQIRRKDGSDVSLDDCAHFSASMDEALEASQLFTEAYVLEISSPGIGDQLHSDQDF 95

Query: 110 LRWNGHVV 117
           L + G  V
Sbjct: 96  LTFRGFPV 103


>gi|33863792|ref|NP_895352.1| hypothetical protein PMT1525 [Prochlorococcus marinus str. MIT
           9313]
 gi|51316777|sp|Q7V5M7|RIMP_PROMM RecName: Full=Ribosome maturation factor rimP
 gi|33635375|emb|CAE21700.1| DUF150 [Prochlorococcus marinus str. MIT 9313]
          Length = 154

 Score = 41.6 bits (96), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 51  LLLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           + +Q+ + R DG +++L DC   S ++   L+   +    Y LE+SSPGI   +    DF
Sbjct: 36  MTIQVQIRRKDGSDVSLDDCAHFSASMDEALEASQLFTEAYVLEISSPGIGDQLHSDQDF 95

Query: 110 LRWNGHVV 117
           L + G  V
Sbjct: 96  LTFRGFPV 103


>gi|317484450|ref|ZP_07943363.1| hypothetical protein HMPREF0179_00714 [Bilophila wadsworthia 3_1_6]
 gi|316924310|gb|EFV45483.1| hypothetical protein HMPREF0179_00714 [Bilophila wadsworthia 3_1_6]
          Length = 205

 Score = 41.6 bits (96), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            +T+  C ELS+     LDVE+    ++ LE+SSPG+ RP  +      + G  +  E+V
Sbjct: 65  GVTIDQCAELSRLAGLALDVEDPFATNWTLEISSPGLQRPFFKIDQLRNYVGREL--EVV 122

Query: 123 LSS-----GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           L++       ++K  G +   ++  F L       K     ++ I++  +  A L+
Sbjct: 123 LAAPLDTWPGRKKFSGVLAAVADEEFTLSLPDTSRKAEEPEEVTIAWPFVRKATLV 178


>gi|125624586|ref|YP_001033069.1| hypothetical protein llmg_1797 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166980233|sp|A2RM41|RIMP_LACLM RecName: Full=Ribosome maturation factor rimP
 gi|124493394|emb|CAL98368.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071377|gb|ADJ60777.1| hypothetical protein LLNZ_09255 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 157

 Score = 41.6 bits (96), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 4/90 (4%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV---ENIIEGHYRLEVSSPGIDRPMVRK 106
           +++L I V+++ G + + +  ELS+ ISP+LD    +      Y LEV+SPG +RP+ + 
Sbjct: 33  DMMLSILVDKE-GGIEIDETAELSELISPLLDTISPDPFPTEGYLLEVASPGAERPLRKA 91

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             F    G  +  ++     ++++  G ++
Sbjct: 92  EHFAGAVGEYIFVKLYQKINNEKEFTGDLV 121


>gi|116511572|ref|YP_808788.1| hypothetical protein LACR_0813 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|122940261|sp|Q030K6|RIMP_LACLS RecName: Full=Ribosome maturation factor rimP
 gi|116107226|gb|ABJ72366.1| hypothetical protein LACR_0813 [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 157

 Score = 41.6 bits (96), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 4/90 (4%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV---ENIIEGHYRLEVSSPGIDRPMVRK 106
           +++L I V+++ G + + +  ELS+ ISP+LD    +      Y LEV+SPG +RP+ + 
Sbjct: 33  DMMLSILVDKE-GGIEIDETAELSELISPLLDTISPDPFPTEGYLLEVASPGAERPLRKA 91

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             F    G  +  ++     ++++  G ++
Sbjct: 92  EHFAGAVGEYIFVKLYQKINNEKEFTGDLV 121


>gi|297571192|ref|YP_003696966.1| hypothetical protein Arch_0611 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931539|gb|ADH92347.1| protein of unknown function DUF150 [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 156

 Score = 41.6 bits (96), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 61/105 (58%), Gaps = 5/105 (4%)

Query: 21  LAGDISSVIQPVIEE--MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE--ELSQAI 76
           ++  I+ ++ PV++E  +   +V++ +   K+ ++++ V+   G   +   +  ++S+A+
Sbjct: 5   VSAQIAQLLDPVVQESGLWLETVRV-VGAGKHTVVRVTVDLPSGPGGVDSTQLMDVSRAV 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           S +LD ++ I+G Y LEVS+PG  R +  +  F R  G  VA ++
Sbjct: 64  SVVLDEKDPIKGAYTLEVSTPGATRELSEERHFSRAIGRKVAFQL 108


>gi|319744371|gb|EFV96731.1| hypothetical protein containing DUF150 [Streptococcus agalactiae
           ATCC 13813]
          Length = 127

 Score = 41.6 bits (96), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPM 103
           + +L I +++  G +T+ D  +L+  +SP+LD    +     Y LEVSSPG++RP+
Sbjct: 4   DYVLSILIDKP-GGITVEDTVQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPL 58


>gi|148243066|ref|YP_001228223.1| hypothetical protein SynRCC307_1967 [Synechococcus sp. RCC307]
 gi|147851376|emb|CAK28870.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 185

 Score = 41.6 bits (96), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 53  LQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
           L + V + DG ++ L DC   SQA    L+   ++ G Y LE++SPG+   + +  DF  
Sbjct: 68  LIVAVRKGDGSDVNLDDCASFSQAFGEALETGELLTGAYVLEITSPGLGDVLQQDRDFRS 127

Query: 112 WNGHVVACEIVLSSGDKQKLIGKIMG 137
           + G  V      + G + +  G ++G
Sbjct: 128 FRGFPVCVRQRDAKGGEIQREGTLLG 153


>gi|229491457|ref|ZP_04385281.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229321742|gb|EEN87539.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 206

 Score = 41.2 bits (95), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKS 107
           K+  ++I V+ D G + L    E+S+ +S + D +E I E  Y LEV+SPGIDRP+    
Sbjct: 34  KHSAVRIMVDSDAG-IELDAAAEISRLVSELFDTLEEIGETPYTLEVTSPGIDRPLTLDR 92

Query: 108 DFLRWNGH 115
            + R  G 
Sbjct: 93  HWRRARGR 100


>gi|220912194|ref|YP_002487503.1| hypothetical protein Achl_1424 [Arthrobacter chlorophenolicus A6]
 gi|219859072|gb|ACL39414.1| protein of unknown function DUF150 [Arthrobacter chlorophenolicus
           A6]
          Length = 222

 Score = 41.2 bits (95), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 58  ERDDGNMTLRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHV 116
           + + G ++L    ++S+ +S  LD +   +   Y LEVSSPG+ RP+     + R  G +
Sbjct: 85  QEETGGVSLDVIADISKVLSDALDNDPGADTRPYDLEVSSPGVGRPLTEPRHWHRAKGRI 144

Query: 117 VACEIVLSSGDKQKLIGKIMGTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
              +++      + + G+I    + G  L  E   K+G K      + + FD + + ++
Sbjct: 145 ATVKVIQG----ENVTGRIQSVDDGGVTLVPEIAVKKGMKPKQGDPVKLPFDRIRTGKV 199


>gi|300812571|ref|ZP_07092988.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496444|gb|EFK31549.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 158

 Score = 41.2 bits (95), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           I   I+PVI       V +  ++EK+   L+I+V++    + +    ELS+ +   LD  
Sbjct: 8   IQEAIEPVIIGHDCELVDLEYVKEKSQDYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +
Sbjct: 68  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYI 103


>gi|241895993|ref|ZP_04783289.1| hypothetical protein of function DUF150 [Weissella
           paramesenteroides ATCC 33313]
 gi|241870724|gb|EER74475.1| hypothetical protein of function DUF150 [Weissella
           paramesenteroides ATCC 33313]
          Length = 235

 Score = 41.2 bits (95), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 87/169 (51%), Gaps = 13/169 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKN--LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           ++ ++++P++ +  F    + L E+++   +L++ V+R DG + + D   L++ IS  LD
Sbjct: 14  NVQAILKPILAKKGFDLWDV-LYEKQDSDFVLRVLVDRVDGEINMDDLVMLTEVISDELD 72

Query: 82  V--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS--GDKQKLIGKIMG 137
           +   +     Y L+VSSPG DR + +  +F+   G  +  E++L++     +K  G+++ 
Sbjct: 73  MITPDPFPQAYLLDVSSPGADRELQQPGNFVWAVGKFI--EVILNNPVAGLEKFTGQLVS 130

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
             +    ++   + +  +    I I  D++  A L V+ + +  +  +Y
Sbjct: 131 FLDDKLTIDVALKTKHQL----IEIDLDNIQKANLSVSQDRILTTEEDY 175


>gi|259585703|sp|B8HG52|RIMP_ARTCA RecName: Full=Ribosome maturation factor rimP
          Length = 205

 Score = 41.2 bits (95), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 8/115 (6%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           G ++L    ++S+ +S  LD +   +   Y LEVSSPG+ RP+     + R  G +   +
Sbjct: 72  GGVSLDVIADISKVLSDALDNDPGADTRPYDLEVSSPGVGRPLTEPRHWHRAKGRIATVK 131

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
           ++      + + G+I    + G  L  E   K+G K      + + FD + + ++
Sbjct: 132 VIQG----ENVTGRIQSVDDGGVTLVPEIAVKKGMKPKQGDPVKLPFDRIRTGKV 182


>gi|328465728|gb|EGF36932.1| ribosome maturation protein RimP [Lactobacillus helveticus MTCC
           5463]
          Length = 158

 Score = 41.2 bits (95), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 11/151 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  VI+ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S  LD  
Sbjct: 8   VRPVIETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVSEKLDTI 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +   +  
Sbjct: 68  DPDPLPDPYVLELSSPGAERPITTEADWKRALNDYVHIGLYQKIDDKKVYEGTLKYYNND 127

Query: 142 GFFLE-KEKRGEKDMN-------ELQIAISF 164
              LE K+K   K +        +++ AI F
Sbjct: 128 EIVLEVKDKTRRKKLTIPRKLIAKIRFAIEF 158


>gi|312872031|ref|ZP_07732109.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1]
 gi|311092444|gb|EFQ50810.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1]
          Length = 148

 Score = 41.2 bits (95), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N   + 
Sbjct: 4   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 63

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             Y LE+SSPG++RP+  ++D+ +     V
Sbjct: 64  DPYILELSSPGVERPIKTEADWCKAKNDYV 93


>gi|312871843|ref|ZP_07731928.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a]
 gi|311092624|gb|EFQ50983.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a]
          Length = 146

 Score = 41.2 bits (95), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N   + 
Sbjct: 2   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             Y LE+SSPG++RP+  ++D+ +     V
Sbjct: 62  DPYILELSSPGVERPIKTEADWCKAKNDYV 91


>gi|309808386|ref|ZP_07702287.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
 gi|308168371|gb|EFO70488.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
          Length = 145

 Score = 41.2 bits (95), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N   + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             Y LE+SSPG++RP+  ++D+ +     V
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKNDYV 90


>gi|309804436|ref|ZP_07698504.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
 gi|308166249|gb|EFO68464.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
          Length = 115

 Score = 41.2 bits (95), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 3/84 (3%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N   + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLR 111
             Y LE+SSPG++RP+  ++D+ +
Sbjct: 61  DPYILELSSPGVERPIKTEADWCK 84


>gi|325912470|ref|ZP_08174863.1| hypothetical protein HMPREF0522_0261 [Lactobacillus iners UPII
           143-D]
 gi|325475717|gb|EGC78890.1| hypothetical protein HMPREF0522_0261 [Lactobacillus iners UPII
           143-D]
          Length = 145

 Score = 40.8 bits (94), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N   + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             Y LE+SSPG++RP+  ++D+ +     V
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKNDYV 90


>gi|110639789|ref|YP_679999.1| hypothetical protein CHU_3420 [Cytophaga hutchinsonii ATCC 33406]
 gi|122966504|sp|Q11PK7|RIMP_CYTH3 RecName: Full=Ribosome maturation factor rimP
 gi|110282470|gb|ABG60656.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 167

 Score = 40.8 bits (94), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 55  IFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWN 113
           + +++D G + + +C E S+A+  +++  N+  +  Y LEVSSPG+DRP++    + R  
Sbjct: 40  VILDKDSG-ILIDECGEFSRALGNLIEENNLFGDNAYVLEVSSPGMDRPLLVSRQYKRRI 98

Query: 114 GHVVA 118
           G+ ++
Sbjct: 99  GNTLS 103


>gi|303248241|ref|ZP_07334504.1| protein of unknown function DUF150 [Desulfovibrio fructosovorans
           JJ]
 gi|302490379|gb|EFL50290.1| protein of unknown function DUF150 [Desulfovibrio fructosovorans
           JJ]
          Length = 180

 Score = 40.8 bits (94), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 18/73 (24%), Positives = 37/73 (50%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            +T+ +C  +S+ +  +L++E++  G Y LEVSSPG  R          + G  +  ++ 
Sbjct: 58  GVTIDECATVSRHLGTLLEMEDLFHGPYVLEVSSPGFGRRFFSADQLPAYIGEAIEAKLA 117

Query: 123 LSSGDKQKLIGKI 135
                +++  GK+
Sbjct: 118 APRDGRKRFRGKL 130


>gi|309809702|ref|ZP_07703557.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
 gi|325912543|ref|ZP_08174930.1| hypothetical protein HMPREF0523_0654 [Lactobacillus iners UPII
           60-B]
 gi|308169982|gb|EFO72020.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
 gi|325478152|gb|EGC81277.1| hypothetical protein HMPREF0523_0654 [Lactobacillus iners UPII
           60-B]
          Length = 145

 Score = 40.8 bits (94), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 3/84 (3%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N   + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLR 111
             Y LE+SSPG++RP+  ++D+ +
Sbjct: 61  DPYILELSSPGVERPIKTEADWCK 84


>gi|300173096|ref|YP_003772262.1| hypothetical protein LEGAS_0795 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887475|emb|CBL91443.1| conserved hypothetical protein [Leuconostoc gasicomitatum LMG
           18811]
          Length = 158

 Score = 40.8 bits (94), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 17/128 (13%)

Query: 52  LLQIFVERDDGN-MTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKSD 108
           +L+I +++ +   +T+ D    +Q ++ +LD    + I   Y L++SSPG DRP+ +   
Sbjct: 37  VLRILLDKPNHQFITMADLTAFTQEVNELLDTSDPDPIPEAYLLDISSPGADRPLKQPWH 96

Query: 109 FLRW----NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISF 164
           F +W    N +++    V  +G K K  GKI   ++ G  L  +  GE       I ++F
Sbjct: 97  F-KWAQDGNENILMSLFVAKNGQK-KWQGKIKTLTDNGLVLLTD-HGE-------IILNF 146

Query: 165 DSLLSARL 172
           D +  A L
Sbjct: 147 DEIAKAVL 154


>gi|227878820|ref|ZP_03996727.1| protein of hypothetical function DUF150 [Lactobacillus crispatus
           JV-V01]
 gi|227861568|gb|EEJ69180.1| protein of hypothetical function DUF150 [Lactobacillus crispatus
           JV-V01]
          Length = 172

 Score = 40.8 bits (94), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S  LD  
Sbjct: 22  VRPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVSEKLDAL 81

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDF 109
             + +   Y LE+SSPG +RP+  K+D+
Sbjct: 82  DPDPLPDPYVLELSSPGAERPIKTKADW 109


>gi|257791561|ref|YP_003182167.1| hypothetical protein Elen_1813 [Eggerthella lenta DSM 2243]
 gi|325833208|ref|ZP_08165714.1| hypothetical protein HMPREF9404_3885 [Eggerthella sp. HGA1]
 gi|257475458|gb|ACV55778.1| protein of unknown function DUF150 [Eggerthella lenta DSM 2243]
 gi|325485590|gb|EGC88058.1| hypothetical protein HMPREF9404_3885 [Eggerthella sp. HGA1]
          Length = 159

 Score = 40.8 bits (94), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 7/70 (10%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQA---ISPILDVENIIEGHYRLEVSSPGIDRPMV 104
           +K   ++++++  DG       +ELS A   I+ ++D  +   G Y LEVSSPGIDRP+ 
Sbjct: 33  KKAPTIRVYIDTPDGV----SFDELSSAQAWINDLMDELDPFPGAYTLEVSSPGIDRPLR 88

Query: 105 RKSDFLRWNG 114
               F R+ G
Sbjct: 89  TAEHFARFVG 98


>gi|254482605|ref|ZP_05095844.1| conserved hypothetical protein [marine gamma proteobacterium
           HTCC2148]
 gi|214037296|gb|EEB77964.1| conserved hypothetical protein [marine gamma proteobacterium
           HTCC2148]
          Length = 90

 Score = 40.8 bits (94), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +LDVE+ I G Y LEVSSPG+DR + + + +  + G ++   +  +   ++K  G + G
Sbjct: 1   MLDVEDPITGEYTLEVSSPGMDRLLFQLTQYPAYVGEIIELRLRSAFEGRRKFKGVLKG 59


>gi|213852789|ref|ZP_03382321.1| hypothetical protein SentesT_07966 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 82

 Score = 40.8 bits (94), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 4   YNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 49


>gi|268319260|ref|YP_003292916.1| hypothetical protein FI9785_775 [Lactobacillus johnsonii FI9785]
 gi|262397635|emb|CAX66649.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 158

 Score = 40.8 bits (94), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ V+ P+ E      V +  ++EK    L+I+V+R    + + +   LS+ +S  LD  
Sbjct: 8   VADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPVGIDIEEIANLSELVSEKLDKL 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             +     Y LE+SSPG++RP+  + D+ R  G  +
Sbjct: 68  DPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYI 103


>gi|256832249|ref|YP_003160976.1| hypothetical protein Jden_1017 [Jonesia denitrificans DSM 20603]
 gi|256685780|gb|ACV08673.1| protein of unknown function DUF150 [Jonesia denitrificans DSM
           20603]
          Length = 177

 Score = 40.8 bits (94), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G + L     +S+ +S  LD  +++   Y LEVSSPG  RP+ +   F R  G +++ + 
Sbjct: 51  GPVGLETISSVSRDLSTALDSVSVLHSQYTLEVSSPGTSRPLTQPRHFRRNVGRLISVKT 110

Query: 122 V 122
           V
Sbjct: 111 V 111


>gi|118473512|ref|YP_886961.1| hypothetical protein MSMEG_2624 [Mycobacterium smegmatis str. MC2
           155]
 gi|259585793|sp|A0QVM3|RIMP_MYCS2 RecName: Full=Ribosome maturation factor rimP
 gi|118174799|gb|ABK75695.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 181

 Score = 40.8 bits (94), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           D  + L     LS+  S +LD  +  +  Y LEV+SPG+DRP+  +  F R  G     +
Sbjct: 54  DKGLDLDAVAMLSRLASGLLDTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGR----K 109

Query: 121 IVLSSGDKQKLIGKIMGT 138
             LS  D   L  ++ GT
Sbjct: 110 AELSLADGSSLTARLGGT 127


>gi|313124032|ref|YP_004034291.1| ribosome maturation factor rimp [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280595|gb|ADQ61314.1| Ribosome maturation factor rimP [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 158

 Score = 40.4 bits (93), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           I   I+PVI       V +  ++EK+   L+I+V++    + +    ELS+ +   LD  
Sbjct: 8   ILEAIEPVIIGHDCELVDLEYVKEKSQYYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +
Sbjct: 68  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYI 103


>gi|312875705|ref|ZP_07735702.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b]
 gi|311088770|gb|EFQ47217.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b]
          Length = 144

 Score = 40.4 bits (93), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 41  VQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IEGHYRLEVSSP 97
           V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N   +   Y LE+SSP
Sbjct: 10  VDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLPDPYILELSSP 69

Query: 98  GIDRPMVRKSDFLRWNGHVV 117
           G++RP+  ++D+ +     V
Sbjct: 70  GVERPIKTEADWCKAKNDYV 89


>gi|309804399|ref|ZP_07698473.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
 gi|308163514|gb|EFO65787.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
          Length = 144

 Score = 40.4 bits (93), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 41  VQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IEGHYRLEVSSP 97
           V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+ N   +   Y LE+SSP
Sbjct: 10  VDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLPDPYILELSSP 69

Query: 98  GIDRPMVRKSDFLRWNGHVV 117
           G++RP+  ++D+ +     V
Sbjct: 70  GVERPIKTEADWCKAKNDYV 89


>gi|167751251|ref|ZP_02423378.1| hypothetical protein EUBSIR_02237 [Eubacterium siraeum DSM 15702]
 gi|167655758|gb|EDR99887.1| hypothetical protein EUBSIR_02237 [Eubacterium siraeum DSM 15702]
          Length = 163

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 22/99 (22%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           + P+IE   +    +   +E  +  L++  ++ DG +   +CEE+++ ++  +D  + I+
Sbjct: 23  VLPIIERYGYELWDVIFEKEGAMWYLKVLFDKADGGIDDVECEEITEPLNKAVDTLSCID 82

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
                EV SPG+DR + +   F++  G  +   +   +G
Sbjct: 83  LVDVFEVGSPGLDRQLRKPFHFVKMKGEKIKVTVRDENG 121


>gi|294631731|ref|ZP_06710291.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292835064|gb|EFF93413.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 169

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           +  +L++ V+ D G   L    ++S+A+S  LD  + + EG Y LEV +PG +R +    
Sbjct: 34  RKRVLRVVVDSDTG-ADLDQIADVSRALSAKLDESDAMGEGEYTLEVGTPGAERLLTEHR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
            ++R  G +   ++     +  +L+ +I+   + G  LE    G K        ++F  +
Sbjct: 93  HYVRATGRLAKFQL----AEGGELVARILRVDDEGLDLEVP--GVKGRKATTRRVAFPDV 146

Query: 168 LSARLIV 174
           + AR+ V
Sbjct: 147 VRARVQV 153


>gi|642363|emb|CAA88035.1| 15 kD protein [Thermus thermophilus]
          Length = 156

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 59  RDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           +D+  +T+ D EE S+ I   LD E+ I G YRL V SPG  R   R+  F R+ G
Sbjct: 51  KDERPITVADLEEASRHIEAALDREDPIPGSYRLLVESPGPKRLFTRRH-FERFQG 105


>gi|255033850|ref|YP_003084471.1| hypothetical protein Dfer_0034 [Dyadobacter fermentans DSM 18053]
 gi|254946606|gb|ACT91306.1| protein of unknown function DUF150 [Dyadobacter fermentans DSM
           18053]
          Length = 160

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 55  IFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           I V+ D+G +T++ C  +S+ ++  L+   +    Y LEVSSPG+D+P++    + +  G
Sbjct: 38  ILVDSDEG-ITIQQCTSISRRLAKQLEELEVFTQAYTLEVSSPGLDQPLLLPRQYKKNVG 96

Query: 115 HVVACEIVLSSGD 127
                +I L SG+
Sbjct: 97  R--NLKITLKSGE 107


>gi|315604482|ref|ZP_07879547.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313809|gb|EFU61861.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 156

 Score = 40.4 bits (93), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+S  LD  + I+G Y LEVS+PG +R + +   +LR  G +V   + L +G    +
Sbjct: 60  VSRAVSRALDDADPIDGEYLLEVSTPGAERELTKVDHWLRQVGRLV--RVKLRAG--GHV 115

Query: 132 IGKIMGTSETGFFLE 146
            G+++   E+G  ++
Sbjct: 116 SGRVVDADESGATID 130


>gi|169630218|ref|YP_001703867.1| hypothetical protein MAB_3136c [Mycobacterium abscessus ATCC 19977]
 gi|259585791|sp|B1MD92|RIMP_MYCA9 RecName: Full=Ribosome maturation factor rimP
 gi|169242185|emb|CAM63213.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 189

 Score = 40.4 bits (93), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           LS+  S +LD  +     Y LE+++PG+DRP+   + F R   H+   +I L++G  + L
Sbjct: 70  LSRTASALLDEADTGWQAYELEITTPGVDRPLTTVAHFRR--AHLRLAQIRLTNG--EDL 125

Query: 132 IGKIMGTSETG--FFLEKEKRG 151
           +G+I  T + G    L K  +G
Sbjct: 126 LGRIGITHDDGVQVVLRKPIKG 147


>gi|239928613|ref|ZP_04685566.1| hypothetical protein SghaA1_10340 [Streptomyces ghanaensis ATCC
           14672]
 gi|291436938|ref|ZP_06576328.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339833|gb|EFE66789.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 173

 Score = 40.4 bits (93), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 7/151 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VE 83
           +  +++P++    F   +I++       +   V   D    L    ++S+A+S  LD  +
Sbjct: 9   LRELLEPLVSSQGFDLEEIAVDSVGRRRVLRVVVDSDTGADLDRIADVSRALSAKLDETD 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            + +G Y LEV +PG +R +     ++R  G +V  ++     +  +L+ +I+   + G 
Sbjct: 69  AMGQGEYTLEVGTPGAERLLTEHRHYVRATGRLVRFQLA----EGGELVARILEVGDDGL 124

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE    G K        ++FD +  AR+ V
Sbjct: 125 DLEVP--GVKGRKATARRLAFDDITRARVQV 153


>gi|325685947|gb|EGD28010.1| hypothetical protein HMPREF5505_0324 [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 176

 Score = 40.4 bits (93), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           I   I+PVI       V +  ++EK+   L+I+V++    + +    ELS+ +   LD  
Sbjct: 26  ILEAIEPVIIGHDCELVDLEYVKEKSQYYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 85

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +
Sbjct: 86  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYI 121


>gi|87125355|ref|ZP_01081201.1| hypothetical protein RS9917_08055 [Synechococcus sp. RS9917]
 gi|86167124|gb|EAQ68385.1| hypothetical protein RS9917_08055 [Synechococcus sp. RS9917]
          Length = 155

 Score = 40.0 bits (92), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 2/148 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN-MTLRDCEELSQAISP 78
           L  D+++V     +   F    + ++   + + LQI + R +G+ ++L DC  LS  +  
Sbjct: 5   LLPDLTAVAASTAQAHGFELADVQVMTHLQPMTLQIQIRRSNGDDVSLDDCARLSAPMGD 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +D   +    Y LE+SSPGI   +    DF  +  + +        G +Q+  G ++  
Sbjct: 65  AIDNAALPIEAYVLEISSPGIGDQLQTDRDFRTFRSYPIEVIYRDDEGGEQRQQGSLLER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDS 166
           ++    L    R ++   +  IA+   S
Sbjct: 125 TDEHIHLNVRGRIKRISRQAVIAVQLTS 152


>gi|320531906|ref|ZP_08032816.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320135875|gb|EFW27913.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 172

 Score = 40.0 bits (92), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           G++ L     ++ A+S  LD  + ++G Y LEVS+PG +R +     F R  GH V
Sbjct: 61  GDLDLDSLGPVTAAVSQALDEADPVKGQYTLEVSTPGAERELTTLRHFRRAVGHSV 116


>gi|256843342|ref|ZP_05548830.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256849839|ref|ZP_05555270.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262046915|ref|ZP_06019875.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
 gi|293381213|ref|ZP_06627221.1| SP14.3 family protein [Lactobacillus crispatus 214-1]
 gi|295693138|ref|YP_003601748.1| hypothetical protein LCRIS_01276 [Lactobacillus crispatus ST1]
 gi|312978243|ref|ZP_07789987.1| SP14.3 protein [Lactobacillus crispatus CTV-05]
 gi|256614762|gb|EEU19963.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256713328|gb|EEU28318.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260572897|gb|EEX29457.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
 gi|290922253|gb|EFD99247.1| SP14.3 family protein [Lactobacillus crispatus 214-1]
 gi|295031244|emb|CBL50723.1| UPF0090 protein [Lactobacillus crispatus ST1]
 gi|310894961|gb|EFQ44031.1| SP14.3 protein [Lactobacillus crispatus CTV-05]
          Length = 158

 Score = 40.0 bits (92), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S  LD  
Sbjct: 8   VRPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVSEKLDAL 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDF 109
             + +   Y LE+SSPG +RP+  K+D+
Sbjct: 68  DPDPLPDPYVLELSSPGAERPIKTKADW 95


>gi|15806797|ref|NP_295519.1| hypothetical protein DR_1796 [Deinococcus radiodurans R1]
 gi|34223164|sp|Q9RTG8|RIMP_DEIRA RecName: Full=Ribosome maturation factor rimP
 gi|6459574|gb|AAF11352.1|AE002021_1 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 158

 Score = 40.0 bits (92), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 2/85 (2%)

Query: 32  VIEEMSFRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVENIIEGH 89
            +  + F  ++++   E ++L++ + ++R D+  +T+ D    S+A     D  + IE  
Sbjct: 18  AVRPLGFEVLEVTQQREGRDLIVLVRIDRLDEQPVTMDDLTAASRAAEAEFDRVDPIEEE 77

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNG 114
           YRLE  SPG  RP++R   F R  G
Sbjct: 78  YRLEFESPGGKRPLLRARHFERMIG 102


>gi|104774215|ref|YP_619195.1| hypothetical protein Ldb1336 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514303|ref|YP_813209.1| hypothetical protein LBUL_1245 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122274965|sp|Q049V1|RIMP_LACDB RecName: Full=Ribosome maturation factor rimP
 gi|122397110|sp|Q1G9P5|RIMP_LACDA RecName: Full=Ribosome maturation factor rimP
 gi|103423296|emb|CAI98137.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093618|gb|ABJ58771.1| hypothetical protein LBUL_1245 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 158

 Score = 40.0 bits (92), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           I   I+PVI       V +  ++EK+   L+I+V++    + +    ELS+ +   LD  
Sbjct: 8   ILEAIEPVIIGHDCELVDLEYVKEKSQDYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +
Sbjct: 68  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYI 103


>gi|257063652|ref|YP_003143324.1| hypothetical protein Shel_09340 [Slackia heliotrinireducens DSM
           20476]
 gi|256791305|gb|ACV21975.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
           20476]
          Length = 158

 Score = 40.0 bits (92), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           K   ++++++  +G +T  D       ++ I++  +   G Y LEVSSPGIDRP+     
Sbjct: 34  KAPTIRVYLDTPEG-VTFDDIAAAQVWVNEIVEEIDPFPGAYTLEVSSPGIDRPLRTPEH 92

Query: 109 FLRWNGHVV 117
           F R+ G  V
Sbjct: 93  FARFAGEDV 101


>gi|330718232|ref|ZP_08312832.1| hypothetical protein LfalK3_02050 [Leuconostoc fallax KCTC 3537]
          Length = 158

 Score = 40.0 bits (92), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 4/83 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGN-MTLRDCEELSQAISPILDV 82
           ++ +++PVI+E       ++   E    +L+I +++ D   +T+ D  +L++ I+ +LD 
Sbjct: 9   VAQLVKPVIDEHGDILWDLTFGNEGGQRVLRILIDKADHEFITMNDLTKLTEEINELLDN 68

Query: 83  E--NIIEGHYRLEVSSPGIDRPM 103
              + I G Y L++SSPG DRP+
Sbjct: 69  SEPDPIPGTYMLDISSPGADRPL 91


>gi|42526618|ref|NP_971716.1| hypothetical protein TDE1108 [Treponema denticola ATCC 35405]
 gi|51316704|sp|Q73NP4|RIMP_TREDE RecName: Full=Ribosome maturation factor rimP
 gi|41816811|gb|AAS11597.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
 gi|325473160|gb|EGC76356.1| hypothetical protein HMPREF9353_02549 [Treponema denticola F0402]
          Length = 148

 Score = 40.0 bits (92), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 3/89 (3%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           S  +P++E + F+ V +++L +K++     V + +  + ++DC  + + + P   +E +I
Sbjct: 13  SECEPLVEGLGFKLVDLNVLHKKDVWQVKAVIKSEKGVGIKDCTSVHRTLQP--RIEALI 70

Query: 87  EGH-YRLEVSSPGIDRPMVRKSDFLRWNG 114
                 +EVSSPGI+R + R  +F  + G
Sbjct: 71  GSQDVTMEVSSPGINRLVKRAVEFYAFVG 99


>gi|262202084|ref|YP_003273292.1| hypothetical protein Gbro_2150 [Gordonia bronchialis DSM 43247]
 gi|262085431|gb|ACY21399.1| protein of unknown function DUF150 [Gordonia bronchialis DSM 43247]
          Length = 179

 Score = 40.0 bits (92), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111
             + V+RD G   L    ELS  I  +LD V  + +  Y LEV+SPGIDRP+     + R
Sbjct: 37  FSVVVDRD-GGSDLDVLAELSTEIGEVLDAVPALADAAYTLEVTSPGIDRPLTAPRHWRR 95

Query: 112 WNGHVVACE 120
             G  V  E
Sbjct: 96  ALGRRVRIE 104


>gi|213962899|ref|ZP_03391159.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
 gi|213954556|gb|EEB65878.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
          Length = 155

 Score = 40.0 bits (92), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 8/117 (6%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           ++I ++ D G + + DC ELS+A+   LD E +    + LEV+S G   P V +  + + 
Sbjct: 34  IRITIDGDKG-VCIDDCIELSRAVEGALDRETV---DFALEVTSFGATEPFVMERQYTKN 89

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
            G  V     +++ D +   G + G  E    LE E R  K + + +I +  + L +
Sbjct: 90  AGRTVQ----ITTLDGKTHEGVLKGLQEGKAVLETETREPKPVGKGKITVKKEQLFA 142


>gi|194476585|ref|YP_002048764.1| hypothetical protein PCC_0102 [Paulinella chromatophora]
 gi|171191592|gb|ACB42554.1| hypothetical protein PCC_0102 [Paulinella chromatophora]
          Length = 159

 Score = 40.0 bits (92), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 28/123 (22%)

Query: 42  QISLLEEKN--------------LLLQIFV--ERDDGNMTLRDCEELSQAISPILDVENI 85
           Q++ L EKN              L +QI V  ERD   +++ DC   S+ +   LD  ++
Sbjct: 17  QVAYLSEKNICDMQLLANLVPITLKIQISVSSERD---VSINDCTVFSRQVEEALDNSSL 73

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           ++  Y LEVSSPGI+  ++   DF  + G  V  E+V++         K       G  L
Sbjct: 74  LKEAYILEVSSPGINEELINDRDFRIFRGFPV--EVVVNK-------SKTPTNRREGLLL 124

Query: 146 EKE 148
           E++
Sbjct: 125 ERD 127


>gi|88807315|ref|ZP_01122827.1| hypothetical protein WH7805_12228 [Synechococcus sp. WH 7805]
 gi|88788529|gb|EAR19684.1| hypothetical protein WH7805_12228 [Synechococcus sp. WH 7805]
          Length = 155

 Score = 40.0 bits (92), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  DI+SV         F    I +L   + + +Q+ + R DG +++L DC   S+ +  
Sbjct: 5   LLPDITSVAAATAAAQGFELAGIQILTHLQPMTVQVQIRRSDGSDVSLDDCAGFSRPMGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
            L+ + ++   Y LE+SSPGI   +    DF  +  + V
Sbjct: 65  ALESQALLTEAYVLEISSPGIGDQLQSDRDFQTFRSYPV 103


>gi|283850805|ref|ZP_06368091.1| protein of unknown function DUF150 [Desulfovibrio sp. FW1012B]
 gi|283573728|gb|EFC21702.1| protein of unknown function DUF150 [Desulfovibrio sp. FW1012B]
          Length = 181

 Score = 39.7 bits (91), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 38/71 (53%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            +T+ +C   S+ ++ +L++E++    Y LEVSSPG+ R     +    + G V+  ++ 
Sbjct: 58  GVTIDECARASRHLATLLEMEDLFHDPYVLEVSSPGLGRRFFEPAQLPAYVGQVIEAKLT 117

Query: 123 LSSGDKQKLIG 133
           +    +++  G
Sbjct: 118 VPRDGRKRFKG 128


>gi|323466336|gb|ADX70023.1| Ribosome maturation factor rimP [Lactobacillus helveticus H10]
          Length = 172

 Score = 39.7 bits (91), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 11/149 (7%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV--E 83
            V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S  LD    
Sbjct: 24  PVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVSEKLDTIDP 83

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +   +    
Sbjct: 84  DPLPDPYVLELSSPGAERPIKTEADWKRALNDYVHIGLYQKIDDKKVYEGTLKYYNNDEI 143

Query: 144 FLE-KEKRGEKDMN-------ELQIAISF 164
            LE K+K   K +        +++ AI F
Sbjct: 144 VLEVKDKTRRKKLTIPRKLIAKIRFAIEF 172


>gi|258652413|ref|YP_003201569.1| hypothetical protein Namu_2203 [Nakamurella multipartita DSM 44233]
 gi|258555638|gb|ACV78580.1| protein of unknown function DUF150 [Nakamurella multipartita DSM
           44233]
          Length = 173

 Score = 39.7 bits (91), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 9/99 (9%)

Query: 66  LRDCEELSQAISPILDVEN--IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           L D  E+S+ IS  LD  +  + E  Y LEV+SPG+ RP+     F R  G      +++
Sbjct: 50  LDDAAEVSREISERLDGPDDPMGEHPYTLEVTSPGVGRPLREPRHFRRARGR-----LLV 104

Query: 124 SSGDKQKLIGKIMGTSETG--FFLEKEKRGEKDMNELQI 160
            + ++  + G ++  S+TG    L  +K+G   + EL +
Sbjct: 105 VTTEQGPVTGHLLRASDTGIELALAPDKKGVVTVVELPL 143


>gi|295426317|ref|ZP_06818976.1| protein of hypothetical function DUF150 [Lactobacillus amylolyticus
           DSM 11664]
 gi|295063990|gb|EFG54939.1| protein of hypothetical function DUF150 [Lactobacillus amylolyticus
           DSM 11664]
          Length = 159

 Score = 39.7 bits (91), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 10/114 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDD-GNMTLRDCEELSQAISPILDV 82
           I S I+P+I++     V I  ++EK    L+I+V++D  G + + +   LS+ +S  LD 
Sbjct: 8   IRSEIEPIIDQRGDEFVDIEYVKEKGQNYLRIYVDKDQLGGIDINEIAYLSELVSEKLDS 67

Query: 83  --ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
              + +   Y L +SSPG + P+    D+ +  G  V        G  QK+ GK
Sbjct: 68  LDPDPLPDPYVLGLSSPGAEHPIKSAKDWTKARGEYVHV------GLYQKIDGK 115


>gi|259586224|sp|A9BCI2|RIMP_PROM4 RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 39.7 bits (91), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 49  KNLLLQIFVERD-DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           K + +Q+ +++    +++L DC + S+ IS  +++  +I   Y LE+SSPG+   +    
Sbjct: 34  KPITIQVQIQKKPKKDVSLDDCAQFSELISETIELSKLINEPYLLEISSPGLGDLLQTDK 93

Query: 108 DFLRWNGHVVACEIVLSSGDKQKL 131
           DF  + G  +  E++  + +  KL
Sbjct: 94  DFKTFKGFPI--EVLFKNNENTKL 115


>gi|161507685|ref|YP_001577639.1| hypothetical protein lhv_1346 [Lactobacillus helveticus DPC 4571]
 gi|172048309|sp|A8YVR1|RIMP_LACH4 RecName: Full=Ribosome maturation factor rimP
 gi|160348674|gb|ABX27348.1| hypothetical protein lhv_1346 [Lactobacillus helveticus DPC 4571]
          Length = 158

 Score = 39.7 bits (91), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 11/151 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S  LD  
Sbjct: 8   VRPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVSEKLDTI 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +   +  
Sbjct: 68  DPDPLPDPYVLELSSPGAERPIKTEADWKRALNDYVHIGLYQKIDDKKVYEGTLKYYNND 127

Query: 142 GFFLE-KEKRGEKDMN-------ELQIAISF 164
              LE K+K   K +        +++ AI F
Sbjct: 128 EIVLEVKDKTRRKKLTIPRKLIAKIRFAIEF 158


>gi|291460013|ref|ZP_06599403.1| hypothetical protein GCWU000341_02180 [Oribacterium sp. oral taxon
           078 str. F0262]
 gi|291417354|gb|EFE91073.1| hypothetical protein GCWU000341_02180 [Oribacterium sp. oral taxon
           078 str. F0262]
          Length = 98

 Score = 39.7 bits (91), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 53  LQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGI-DRP 102
           L++F+ R DG  MT  DC  +S+ +S  LD E+ IE  Y LEV S G  D P
Sbjct: 36  LRVFILRKDGEPMTTDDCAAVSRPLSRWLDKEDFIEDEYVLEVCSLGFKDEP 87


>gi|159904154|ref|YP_001551498.1| hypothetical protein P9211_16131 [Prochlorococcus marinus str. MIT
           9211]
 gi|159889330|gb|ABX09544.1| DUF150 [Prochlorococcus marinus str. MIT 9211]
          Length = 171

 Score = 39.7 bits (91), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 49  KNLLLQIFVERD-DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           K + +Q+ +++    +++L DC + S+ IS  +++  +I   Y LE+SSPG+   +    
Sbjct: 50  KPITIQVQIQKKPKKDVSLDDCAQFSELISETIELSKLINEPYLLEISSPGLGDLLQTDK 109

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           DF  + G  +  E++  + +  KL       +++G   E+ K
Sbjct: 110 DFKTFKGFPI--EVLFKNNENTKL-------TKSGLLHERSK 142


>gi|21224052|ref|NP_629831.1| hypothetical protein SCO5703 [Streptomyces coelicolor A3(2)]
 gi|256784870|ref|ZP_05523301.1| hypothetical protein SlivT_10300 [Streptomyces lividans TK24]
 gi|289768764|ref|ZP_06528142.1| UPF0090 protein [Streptomyces lividans TK24]
 gi|34223163|sp|Q9KYR2|RIMP_STRCO RecName: Full=Ribosome maturation factor rimP
 gi|7801275|emb|CAB91139.1| hypothetical protein SC5H4.27 [Streptomyces coelicolor A3(2)]
 gi|289698963|gb|EFD66392.1| UPF0090 protein [Streptomyces lividans TK24]
          Length = 177

 Score = 39.3 bits (90), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           +  +L + V+ D G   L    ++S+A+S  LD  + + EG Y LEV +PG +R + +  
Sbjct: 34  RRRVLSVVVDSDTG-ADLDRIADVSRALSAKLDETDAMGEGEYTLEVGTPGAERSLTQHR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            ++R    +V  +  L  G   +L+ +I+   E G  LE
Sbjct: 93  HYVRATDRLVRFQ--LREG--GELVARILAVDEDGLDLE 127


>gi|220903348|ref|YP_002478660.1| hypothetical protein Ddes_0062 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254799886|sp|B8J1Y7|RIMP_DESDA RecName: Full=Ribosome maturation factor rimP
 gi|219867647|gb|ACL47982.1| protein of unknown function DUF150 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 258

 Score = 39.3 bits (90), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDR---------PMVRKSDFLRWN 113
           + T+  CEE+S+ ++  L+VE+ I   Y LEVS+PG+ R         P V      R +
Sbjct: 87  SATIEQCEEISRHLALALEVEDSIADAYVLEVSTPGLSRLFFSLEQMIPYVGDVVEARLH 146

Query: 114 GHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK---EKRGE-KDMNELQIAISFDSLLS 169
             V + +     G ++   G ++   +  F L        GE +D N+  + + ++++  
Sbjct: 147 TPVASTDPAAHGGPRRVWRGTLVAVEDDAFVLAPVTVSPEGEVEDENQPPVRLPWEAVRR 206

Query: 170 A 170
           A
Sbjct: 207 A 207


>gi|317125352|ref|YP_004099464.1| hypothetical protein Intca_2228 [Intrasporangium calvum DSM 43043]
 gi|315589440|gb|ADU48737.1| protein of unknown function DUF150 [Intrasporangium calvum DSM
           43043]
          Length = 197

 Score = 38.9 bits (89), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 64  MTLRDCEELSQAISPILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           ++L D  + ++A+S  LD  +++    Y LEVSSPG+ RP+  + DF R  G +V
Sbjct: 59  LSLDDIADATRAVSTRLDDSDVMGSMPYVLEVSSPGVGRPLRSRHDFRRQVGRLV 113


>gi|218509056|ref|ZP_03506934.1| hypothetical protein RetlB5_16765 [Rhizobium etli Brasil 5]
          Length = 83

 Score = 38.9 bits (89), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 119 CEIVLSSGDKQKLIGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTD 176
           CE  +   ++++  GKI+     GF LE+++   GE    E +++I F +L  A+LI+TD
Sbjct: 1   CETSIMICNRKRFRGKIVEADADGFTLERDQIAYGE----EPKVSIPFTALSDAKLILTD 56

Query: 177 ELLRASL 183
           +L+R +L
Sbjct: 57  DLIRDAL 63


>gi|227892602|ref|ZP_04010407.1| protein of hypothetical function DUF150 [Lactobacillus ultunensis
           DSM 16047]
 gi|227865587|gb|EEJ73008.1| protein of hypothetical function DUF150 [Lactobacillus ultunensis
           DSM 16047]
          Length = 172

 Score = 38.9 bits (89), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  V++ +I+E     V +  + EK    L+I+V+R+   + + +   LS+ +S  LD  
Sbjct: 22  VRPVVESIIDEHGDMLVDMEYVTEKGKKYLRIYVDREPDGIDIDEIAALSELVSEKLDSL 81

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           N       Y LE+SSPG +RP+   +D+ R     +   +     DK+   G +   ++ 
Sbjct: 82  NPDPFPEPYVLELSSPGAERPIKTAADWKRALNDYIHIGLYQKVEDKKVYEGTLKSYNDD 141

Query: 142 GFFLE-KEKRGEKDMN 156
              LE K+K   K + 
Sbjct: 142 EIVLEIKDKTRRKTLT 157


>gi|193213434|ref|YP_001999387.1| hypothetical protein Cpar_1795 [Chlorobaculum parvum NCIB 8327]
 gi|259585748|sp|B3QQI4|RIMP_CHLP8 RecName: Full=Ribosome maturation factor rimP
 gi|193086911|gb|ACF12187.1| protein of unknown function DUF150 [Chlorobaculum parvum NCIB 8327]
          Length = 170

 Score = 38.9 bits (89), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 52  LLQIFVERDDGNMTLRDCEELSQAISPILDV--ENII--EGHYRLEVSSPGIDRPMVRKS 107
           ++++ +E D G +++  C +LS+ I   L+   EN++   G + L VSSPGI  P+    
Sbjct: 37  IIELTIEADKG-VSIDQCAKLSRTIRARLEACEENLMLAAGDFELMVSSPGIGEPIRVSR 95

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            +LR  G  +    + S G+++++ GK+   S  G
Sbjct: 96  QYLRHLGRKMKVVYLDSEGERKEIEGKLTEASLEG 130


>gi|317490694|ref|ZP_07949160.1| hypothetical protein HMPREF1023_02860 [Eggerthella sp. 1_3_56FAA]
 gi|316910225|gb|EFV31868.1| hypothetical protein HMPREF1023_02860 [Eggerthella sp. 1_3_56FAA]
          Length = 159

 Score = 38.9 bits (89), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 70  EELSQA---ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           +ELS A   I+ ++D  +   G Y LEVSSPGIDRP+     F R+ G
Sbjct: 51  DELSSAQAWINDLMDELDPFPGAYTLEVSSPGIDRPLRTAEHFARFVG 98


>gi|237785728|ref|YP_002906433.1| hypothetical protein ckrop_1145 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259585744|sp|C4LJ85|RIMP_CORK4 RecName: Full=Ribosome maturation factor rimP
 gi|237758640|gb|ACR17890.1| hypothetical protein ckrop_1145 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 189

 Score = 38.9 bits (89), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 9/66 (13%)

Query: 70  EELSQAISPILDVE------NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           EELS  IS   D        N   G YRLEVS+PG D P++    F R  GH+     VL
Sbjct: 54  EELSDEISRNFDAAESDGELNFGAG-YRLEVSTPGFDEPLLAARHFRRQRGHI--ATFVL 110

Query: 124 SSGDKQ 129
           +  D +
Sbjct: 111 NQADDE 116


>gi|158313031|ref|YP_001505539.1| hypothetical protein Franean1_1179 [Frankia sp. EAN1pec]
 gi|259585776|sp|A8L6F1|RIMP_FRASN RecName: Full=Ribosome maturation factor rimP
 gi|158108436|gb|ABW10633.1| protein of unknown function DUF150 [Frankia sp. EAN1pec]
          Length = 308

 Score = 38.5 bits (88), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           I G Y LEV+SPG+DRP+V    + R  G +V    V+   D  ++ G+++   + G  L
Sbjct: 119 ISGAYVLEVTSPGVDRPLVEPRHWRRAVGRLV----VVRRADGVEVEGRVLSADDEGADL 174


>gi|255326387|ref|ZP_05367471.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
 gi|255296604|gb|EET75937.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
          Length = 223

 Score = 38.5 bits (88), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 14/142 (9%)

Query: 24  DISSVIQPVIEEMSF--RSVQISLLEEKNLLLQIFV----ERDDGNMTLRDCEELSQAIS 77
           +++  I PVI E S     ++IS     N  ++I V    ER D +++L    E+S AIS
Sbjct: 58  EVAEAIAPVISEFSLVLEGLKISG-PAANRTVKITVDYTAERTD-SLSLDSLAEISGAIS 115

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD   EN     Y LEVSSPG  R +  +  + R    ++A    +++ D  + + ++
Sbjct: 116 SALDRADENDEFFPYELEVSSPGATRALTERRHWERARTRLIA----VTAPDGTEYLARL 171

Query: 136 MGTSETGFFLEKEKRGEKDMNE 157
               + G  L ++K  +K   E
Sbjct: 172 HEVQDEGPVLARKKNTKKGQKE 193


>gi|54026040|ref|YP_120282.1| hypothetical protein nfa40690 [Nocardia farcinica IFM 10152]
 gi|81373776|sp|Q5YSC3|RIMP_NOCFA RecName: Full=Ribosome maturation factor rimP
 gi|54017548|dbj|BAD58918.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 217

 Score = 38.5 bits (88), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 3/78 (3%)

Query: 61  DGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
           DG   L    ELS  +S +LD  +I  +  Y LEV++PG+DRP+     + R  G  V  
Sbjct: 49  DGAADLDAVAELSSEMSVVLDDTDIFGDSPYLLEVTTPGVDRPLTAPRHWRRAQGRKV-- 106

Query: 120 EIVLSSGDKQKLIGKIMG 137
            I L  G +    G   G
Sbjct: 107 RITLRPGAEPPDPGGSAG 124


>gi|260436689|ref|ZP_05790659.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
 gi|260414563|gb|EEX07859.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
          Length = 155

 Score = 38.5 bits (88), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 17/144 (11%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  D+ +++  V     F    I LL   + + L++ +    G +++L DC   S  +  
Sbjct: 5   LLPDLETLVTDVASSKGFALCGIQLLTHMSPMTLEVQIRHSSGADVSLDDCAGFSGVLGD 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+   ++   Y LE+SSPGI   +    DF  + G  V      +   +Q+L G ++  
Sbjct: 65  ALEASTLLTDAYVLEISSPGIGDQLSSDRDFETFRGFPVEVHHRDNDDSEQRLEGLLL-- 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAI 162
                        E+D + LQI I
Sbjct: 123 -------------ERDADTLQINI 133


>gi|145224622|ref|YP_001135300.1| hypothetical protein Mflv_4042 [Mycobacterium gilvum PYR-GCK]
 gi|315444954|ref|YP_004077833.1| hypothetical protein Mspyr1_33870 [Mycobacterium sp. Spyr1]
 gi|259585792|sp|A4TCF3|RIMP_MYCGI RecName: Full=Ribosome maturation factor rimP
 gi|145217108|gb|ABP46512.1| protein of unknown function DUF150 [Mycobacterium gilvum PYR-GCK]
 gi|315263257|gb|ADT99998.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
          Length = 178

 Score = 38.5 bits (88), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           D  + L    ELS+  S  LD   +    Y LEV+SPG+DRP+  +  + R  G +   E
Sbjct: 54  DRGLDLDAVAELSRLASEQLD--TLDTPPYVLEVTSPGVDRPLTEEKHYRRAQGRL--AE 109

Query: 121 IVLSSGDKQKLIGKI 135
           + L+ G    L G+I
Sbjct: 110 VTLADG--STLTGRI 122


>gi|283458509|ref|YP_003363137.1| hypothetical protein RMDY18_14850 [Rothia mucilaginosa DY-18]
 gi|283134552|dbj|BAI65317.1| uncharacterized protein conserved in archaea [Rothia mucilaginosa
           DY-18]
          Length = 223

 Score = 38.5 bits (88), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 14/142 (9%)

Query: 24  DISSVIQPVIEEMSF--RSVQISLLEEKNLLLQIFV----ERDDGNMTLRDCEELSQAIS 77
           +++  I PVI E S     ++IS     N  ++I V    ER D +++L    E+S AIS
Sbjct: 58  EVAEAIAPVISEFSLVLEGLKISG-PAANRTVKITVDYTAERTD-SLSLDSLAEISGAIS 115

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD   EN     Y LEVSSPG  R +  +  + R    ++A    +++ D  + + ++
Sbjct: 116 SALDRADENDEFFPYELEVSSPGATRALTERRHWERARTRLIA----VTAPDGTEYLARL 171

Query: 136 MGTSETGFFLEKEKRGEKDMNE 157
               + G  L ++K  +K   E
Sbjct: 172 HEVQDDGPVLARKKNTKKGQKE 193


>gi|259016313|sp|Q7U8L5|RIMP_SYNPX RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 38.1 bits (87), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 28/163 (17%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  ++ ++   V  +  F    I LL     + L++ + R +G ++ + DC   S  +  
Sbjct: 5   LLPELETLATSVAADQGFELCGIQLLTHLAPMTLEVHIRRSNGVDVNMDDCAGFSGTLGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIM 136
            L+   ++   Y LE+SSPGI   +    DF  + G  V  E+V    D  +Q+L G ++
Sbjct: 65  ALESAQLLTEAYVLEISSPGIGETLSSDRDFQTFRGFPV--EVVHRDRDDTEQRLEGLLL 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAI-------SFDSLLSARL 172
                          E+D + LQI I         D +LS RL
Sbjct: 123 ---------------ERDEDTLQINIRGRIKRLPRDHVLSVRL 150


>gi|116618454|ref|YP_818825.1| hypothetical protein LEUM_1359 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431860|ref|ZP_03913884.1| protein of hypothetical function DUF150 [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|122271346|sp|Q03WH0|RIMP_LEUMM RecName: Full=Ribosome maturation factor rimP
 gi|116097301|gb|ABJ62452.1| hypothetical protein LEUM_1359 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227352402|gb|EEJ42604.1| protein of hypothetical function DUF150 [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 158

 Score = 38.1 bits (87), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 10/129 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGN-MTLRDCEELSQAISPILDV 82
           +  +I P+IE  +     ++  +E    +L+I +++ D   +T+ D    +Q ++ +LD 
Sbjct: 9   VIDLISPIIEAHNDLLWDLTFTKEGGQKVLRILLDKPDHQFITMNDLTLFTQEVNELLDT 68

Query: 83  --ENIIEGHYRLEVSSPGIDRPMVRKSDFLRW----NGHVVACEIVLSSGDKQKLIGKIM 136
              + I   Y L++SSPG DRP+     F  W    N +++    V   G K K  GKI 
Sbjct: 69  VDPDPIPEAYVLDISSPGADRPLKELWHF-EWAKEANENILVSLFVAKEGQK-KWQGKIA 126

Query: 137 GTSETGFFL 145
             ++ G  L
Sbjct: 127 DLNKDGLTL 135


>gi|256820093|ref|YP_003141372.1| hypothetical protein Coch_1263 [Capnocytophaga ochracea DSM 7271]
 gi|256581676|gb|ACU92811.1| protein of unknown function DUF150 [Capnocytophaga ochracea DSM
           7271]
          Length = 155

 Score = 38.1 bits (87), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 8/117 (6%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           +++ ++ D G + + DC ELS+AI   LD E +    + LEV+S G   P V +  + + 
Sbjct: 34  IRVTIDGDKG-VGIDDCIELSRAIENSLDREAM---DFALEVTSFGATEPFVMERQYAKN 89

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
            G  V     +++ D +   G + G +E    +E E R  K + + +I +  + L +
Sbjct: 90  AGRTVQ----ITTLDGKTHEGLLKGIAEGNVIIETETREPKPVGKGKITVKKEHLFA 142


>gi|184201253|ref|YP_001855460.1| hypothetical protein KRH_16070 [Kocuria rhizophila DC2201]
 gi|259585800|sp|B2GKR8|RIMP_KOCRD RecName: Full=Ribosome maturation factor rimP
 gi|183581483|dbj|BAG29954.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 163

 Score = 38.1 bits (87), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 8/135 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN--MTLRDCEELSQAISPILD 81
           I + ++PV+        +  L  +     LQ+ V+  DG   + L     ++Q IS  LD
Sbjct: 9   IRATVEPVVAAAGLHLEECELKGQGATRTLQVLVDLPDGTEALGLDRVAAVAQEISDALD 68

Query: 82  VENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            ++ + G  Y LEVSSPG  R +     + R  GH+V    +    + ++   +++   E
Sbjct: 69  RDDPVPGPPYELEVSSPGATRTLETPRHWRRTVGHLVRIRTL----EGERYTARLLEAHE 124

Query: 141 TGFFLEKEKRGEKDM 155
               +++  + +K M
Sbjct: 125 DHAVVQRSHQPKKGM 139


>gi|33241095|ref|NP_876037.1| hypothetical protein Pro1646 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|51316781|sp|Q7VA23|RIMP_PROMA RecName: Full=Ribosome maturation factor rimP
 gi|33238624|gb|AAQ00690.1| Uncharacterized YhbC family conserved protein [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 155

 Score = 38.1 bits (87), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 45  LLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPM 103
           L + K + +Q+ +   +G +++L DC  LS+ I  +++   +I   Y LE+SSPG+   +
Sbjct: 30  LAQMKPMKIQLQIRHKNGSDVSLEDCSRLSRPIGEVIENSKLINQSYILEISSPGLSDIL 89

Query: 104 VRKSDFLRWNG 114
               +F  + G
Sbjct: 90  ETDKEFATFKG 100


>gi|33865135|ref|NP_896694.1| hypothetical protein SYNW0601 [Synechococcus sp. WH 8102]
 gi|33638819|emb|CAE07116.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 166

 Score = 38.1 bits (87), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 28/152 (18%)

Query: 32  VIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGH 89
           V  +  F    I LL     + L++ + R +G ++ + DC   S  +   L+   ++   
Sbjct: 27  VAADQGFELCGIQLLTHLAPMTLEVHIRRSNGVDVNMDDCAGFSGTLGEALESAQLLTEA 86

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIMGTSETGFFLEK 147
           Y LE+SSPGI   +    DF  + G  V  E+V    D  +Q+L G ++           
Sbjct: 87  YVLEISSPGIGETLSSDRDFQTFRGFPV--EVVHRDRDDTEQRLEGLLL----------- 133

Query: 148 EKRGEKDMNELQIAI-------SFDSLLSARL 172
               E+D + LQI I         D +LS RL
Sbjct: 134 ----ERDEDTLQINIRGRIKRLPRDHVLSVRL 161


>gi|87301302|ref|ZP_01084143.1| hypothetical protein WH5701_15491 [Synechococcus sp. WH 5701]
 gi|87284270|gb|EAQ76223.1| hypothetical protein WH5701_15491 [Synechococcus sp. WH 5701]
          Length = 156

 Score = 38.1 bits (87), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 51  LLLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           L L I +   DG ++ L +C   S  +  +++   ++   Y LEVSSPGI   ++   DF
Sbjct: 36  LTLVIQIRHADGRDINLDECAAFSGVLGEVVEASELMTQAYVLEVSSPGIGEELLDDRDF 95

Query: 110 LRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
             + G  VA              GK + T+  G  LE+++
Sbjct: 96  HSFRGFPVAVRF---------RDGKGLETTREGLLLERDE 126


>gi|126697020|ref|YP_001091906.1| hypothetical protein P9301_16821 [Prochlorococcus marinus str. MIT
           9301]
 gi|166980189|sp|A3PEY0|RIMP_PROM0 RecName: Full=Ribosome maturation factor rimP
 gi|126544063|gb|ABO18305.1| DUF150 [Prochlorococcus marinus str. MIT 9301]
          Length = 155

 Score = 38.1 bits (87), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 51  LLLQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           ++++I +++ +GN ++L DC   +   S  ++  N++   Y LE+SS G+   +  + DF
Sbjct: 36  IVIEIIIKKTNGNDVSLDDCALFNTPASDEIEKSNLLNCSYVLEISSQGVSDELTSERDF 95

Query: 110 LRWNGHVVACEI 121
             + G  V  E+
Sbjct: 96  KTFKGFPVNVEL 107


>gi|113954072|ref|YP_731567.1| hypothetical protein sync_2370 [Synechococcus sp. CC9311]
 gi|123327605|sp|Q0I7K5|RIMP_SYNS3 RecName: Full=Ribosome maturation factor rimP
 gi|113881423|gb|ABI46381.1| DUF150 [Synechococcus sp. CC9311]
          Length = 157

 Score = 37.7 bits (86), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 9/129 (6%)

Query: 45  LLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPM 103
           L   + + +QI + R  G+ +TL DC   S  +   L+   ++   Y LE+SSPGI   +
Sbjct: 32  LAHMQPMTVQIQIRRSSGDDVTLDDCAAFSAPMGEALENSAVLNEAYVLEISSPGIGDHL 91

Query: 104 VRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS 163
               DF  +  + V        G +QK  G ++  +E    +    R ++        I 
Sbjct: 92  QSDRDFQTFRRYPVDVIHRDPDGAEQKHSGTLLERTENHLKISIHGRIKQ--------IP 143

Query: 164 FDSLLSARL 172
            DS+LS  L
Sbjct: 144 RDSILSVEL 152


>gi|229824125|ref|ZP_04450194.1| hypothetical protein GCWU000282_01429 [Catonella morbi ATCC 51271]
 gi|229786479|gb|EEP22593.1| hypothetical protein GCWU000282_01429 [Catonella morbi ATCC 51271]
          Length = 157

 Score = 37.7 bits (86), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++  I  ++E      V +  ++E K+  L+I+ ++  G + + DC  +S+ IS  LD  
Sbjct: 8   VTPAITEIVEANGCYLVDMEYVKEGKSWFLRIYADKP-GRIDIDDCAAISEQISEHLDSI 66

Query: 83  -ENIIEGHYRLEVSSPGIDRPM 103
             +     Y LEVSSPG +RP+
Sbjct: 67  KPDPFPEAYFLEVSSPGAERPL 88


>gi|212704655|ref|ZP_03312783.1| hypothetical protein DESPIG_02718 [Desulfovibrio piger ATCC 29098]
 gi|212671889|gb|EEB32372.1| hypothetical protein DESPIG_02718 [Desulfovibrio piger ATCC 29098]
          Length = 244

 Score = 37.7 bits (86), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDR 101
           + ++  CEE+S+ +   L+VE++IE  Y LEVS+PG  R
Sbjct: 76  SASIDQCEEISRQLGLALEVEDLIEQAYVLEVSTPGFSR 114


>gi|289705160|ref|ZP_06501563.1| conserved hypothetical protein [Micrococcus luteus SK58]
 gi|289558104|gb|EFD51392.1| conserved hypothetical protein [Micrococcus luteus SK58]
          Length = 195

 Score = 37.4 bits (85), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 53  LQIFVERDDGN--MTLRDCEELSQAISPILD-----VENIIEGHYRLEVSSPGIDRPMVR 105
           +++ ++R  G   ++L D   LS  +S  LD     V  +  G Y LEV++ G+DRP+  
Sbjct: 42  VEVVLDRASGTQGLSLDDVARLSGRVSAALDALGDHVPGVGAGEYLLEVTTAGVDRPLTE 101

Query: 106 KSDFLRWNGHVVACEI 121
              F R  G +V   +
Sbjct: 102 PRHFARNVGRLVEVSV 117


>gi|45658542|ref|YP_002628.1| hypothetical protein LIC12707 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|34222882|sp|Q8F7K3|RIMP_LEPIN RecName: Full=Ribosome maturation factor rimP
 gi|51316950|sp|Q72NX1|RIMP_LEPIC RecName: Full=Ribosome maturation factor rimP
 gi|45601785|gb|AAS71265.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 162

 Score = 37.4 bits (85), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 20/124 (16%)

Query: 62  GNMTLRDCEELSQA-------ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           G+++L +CE++S+        ISP LD        Y L+VSS G +R +    D  R+ G
Sbjct: 48  GSVSLLECEQVSRKLKEELERISPDLD--------YTLKVSSAGAERKLNLPGDLDRFRG 99

Query: 115 HVVACEIVLSSGDKQKL---IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             +   +V  S + +K    I +++        LEK ++G+K + + Q  ++   +L   
Sbjct: 100 --IPIRLVFRSEESEKEQEGIFRVVNRDGDQIVLEKFQKGKKSVVKKQTTLNLKDILKGN 157

Query: 172 LIVT 175
           L V 
Sbjct: 158 LYVN 161


>gi|108799046|ref|YP_639243.1| hypothetical protein Mmcs_2079 [Mycobacterium sp. MCS]
 gi|119868161|ref|YP_938113.1| hypothetical protein Mkms_2125 [Mycobacterium sp. KMS]
 gi|126434649|ref|YP_001070340.1| hypothetical protein Mjls_2062 [Mycobacterium sp. JLS]
 gi|123070305|sp|Q1BA97|RIMP_MYCSS RecName: Full=Ribosome maturation factor rimP
 gi|259585794|sp|A3PY72|RIMP_MYCSJ RecName: Full=Ribosome maturation factor rimP
 gi|259585795|sp|A1UER5|RIMP_MYCSK RecName: Full=Ribosome maturation factor rimP
 gi|108769465|gb|ABG08187.1| protein of unknown function DUF150 [Mycobacterium sp. MCS]
 gi|119694250|gb|ABL91323.1| protein of unknown function DUF150 [Mycobacterium sp. KMS]
 gi|126234449|gb|ABN97849.1| protein of unknown function DUF150 [Mycobacterium sp. JLS]
          Length = 192

 Score = 37.4 bits (85), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           Y LEV+SPG+DRP+  +  + R  G  V  E+ LS G   +L G+I   +  G
Sbjct: 90  YVLEVTSPGVDRPLTTEKHYRRARGRKV--ELTLSDG--SQLTGRIGALTADG 138


>gi|86742246|ref|YP_482646.1| hypothetical protein Francci3_3565 [Frankia sp. CcI3]
 gi|123750811|sp|Q2J725|RIMP_FRASC RecName: Full=Ribosome maturation factor rimP
 gi|86569108|gb|ABD12917.1| protein of unknown function DUF150 [Frankia sp. CcI3]
          Length = 268

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D + ++ G Y LEV+SPG++RP+     + R  G +V     +   D   L G+++   E
Sbjct: 107 DGQGLVAGPYVLEVTSPGVERPLTEPRHWRRAIGRLV----TVRDRDGIVLAGRVLSADE 162

Query: 141 TGFFL 145
           +G  L
Sbjct: 163 SGADL 167


>gi|240146878|ref|ZP_04745479.1| protein associated with NUS operon [Roseburia intestinalis L1-82]
 gi|257200976|gb|EEU99260.1| protein associated with NUS operon [Roseburia intestinalis L1-82]
          Length = 74

 Score = 37.0 bits (84), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 40/61 (65%), Gaps = 2/61 (3%)

Query: 28 VIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
          +I P+++ M+F  V +  ++E     L+ +++++ G +T+ DCE +++ ++ ILD E+ +
Sbjct: 14 LITPILDRMNFELVDVEYVKEGGAWYLRAYIDKE-GGITVNDCEAVAREMNEILDREDFV 72

Query: 87 E 87
          E
Sbjct: 73 E 73


>gi|294827764|ref|NP_711122.2| hypothetical protein LA_0941 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293385607|gb|AAN48140.2| conserved hypothetical protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 123

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 20/124 (16%)

Query: 62  GNMTLRDCEELSQA-------ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           G+++L +CE++S+        ISP LD        Y L+VSS G +R +    D  R+ G
Sbjct: 9   GSVSLLECEQVSRKLKEELERISPDLD--------YTLKVSSAGAERKLNLPGDLDRFRG 60

Query: 115 HVVACEIVLSSGDKQKL---IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             +   +V  S + +K    I +++        LEK ++G+K + + Q  ++   +L   
Sbjct: 61  --IPIRLVFRSEESEKEQEGIFRVVNRDGDQIVLEKFQKGKKSVVKKQTTLNLKDILKGN 118

Query: 172 LIVT 175
           L V 
Sbjct: 119 LYVN 122


>gi|86140763|ref|ZP_01059322.1| hypothetical protein MED217_16465 [Leeuwenhoekiella blandensis
           MED217]
 gi|85832705|gb|EAQ51154.1| hypothetical protein MED217_16465 [Leeuwenhoekiella blandensis
           MED217]
          Length = 154

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 14/124 (11%)

Query: 55  IFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114
           + ++ D+G ++++DC  +S+ +   LD E   E  + LEV S G   P+V K  + +  G
Sbjct: 35  VIIDGDEG-VSVQDCINVSRKVEHNLDRE---EEDFSLEVMSAGATEPLVNKRQYKKNEG 90

Query: 115 HVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMN------ELQIAISFDSLL 168
                E++L  G K K  G ++   + G  L  ++R  K++       E +  I++D++ 
Sbjct: 91  R--DLEVILQDGAKIK--GNLIQVHDEGIVLFWKERVPKEVGKGKMTVEKEEVIAYDAIK 146

Query: 169 SARL 172
            A++
Sbjct: 147 QAKV 150


>gi|224025209|ref|ZP_03643575.1| hypothetical protein BACCOPRO_01943 [Bacteroides coprophilus DSM
           18228]
 gi|224018445|gb|EEF76443.1| hypothetical protein BACCOPRO_01943 [Bacteroides coprophilus DSM
           18228]
          Length = 155

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +I+ V+   +E+  +  V + +  +  ++++I  +  DG + + DC  LS+ +   L  E
Sbjct: 6   EITDVVNKWLEDKEYFLVDVQISADSRIVVEI--DHRDG-VWIDDCVNLSRYLEETLG-E 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +  G Y LEV S G+ +P       LR     V   + + + D +KL G +   SE GF
Sbjct: 62  RL--GDYELEVGSAGLGQPF----KVLRQYEAHVGSSVEVCTKDGRKLHGVLQSASEEGF 115

Query: 144 FLEKEKR 150
            L  E R
Sbjct: 116 TLLTEVR 122


>gi|47095906|ref|ZP_00233509.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47015652|gb|EAL06582.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 101

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 26/38 (68%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           +S+ +S  +D  + I  +Y LEVSSPG +RP+ ++ DF
Sbjct: 1   MSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDF 38


>gi|317968932|ref|ZP_07970322.1| hypothetical protein SCB02_05303 [Synechococcus sp. CB0205]
          Length = 122

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 50  NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
            LL+Q+ +  D G+++L +C   S  +   ++   +++  Y LEVSSPG+   +    DF
Sbjct: 2   TLLVQLRLA-DGGDVSLDNCASFSGVLGDAIENSGLLQDPYVLEVSSPGVSEQLSDDRDF 60

Query: 110 LRWNGHVVACEI--VLSSGDKQK 130
             + G  V+       S GD ++
Sbjct: 61  RSFRGFPVSIRYRDTKSGGDNER 83


>gi|78213594|ref|YP_382373.1| hypothetical protein Syncc9605_2078 [Synechococcus sp. CC9605]
 gi|123577663|sp|Q3AHW4|RIMP_SYNSC RecName: Full=Ribosome maturation factor rimP
 gi|78198053|gb|ABB35818.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 155

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDG-NMTLRDCEELSQAISPILD 81
           D+ ++   V     F    I LL   + + L++ +    G +++L DC   S  +   L+
Sbjct: 8   DLETLATKVAASKGFALCGIQLLTHMSPMTLEVQIRHSSGADVSLDDCAGFSGVLGDALE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
              ++   Y LE+SSPGI   +    DF  + G  V          +Q+L G ++     
Sbjct: 68  ASTLLTDAYVLEISSPGIGDQLSSDRDFETFRGFPVEVHHRDKDDSEQRLEGLLL----- 122

Query: 142 GFFLEKEKRGEKDMNELQIAI 162
                     E+D + LQI I
Sbjct: 123 ----------ERDADTLQINI 133


>gi|213864825|ref|ZP_03386944.1| hypothetical protein SentesT_33610 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 82

 Score = 36.6 bits (83), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 27/46 (58%)

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 4   YNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 49


>gi|157414093|ref|YP_001484959.1| hypothetical protein P9215_17601 [Prochlorococcus marinus str. MIT
           9215]
 gi|166980224|sp|A8G6Z2|RIMP_PROM2 RecName: Full=Ribosome maturation factor rimP
 gi|157388668|gb|ABV51373.1| DUF150 [Prochlorococcus marinus str. MIT 9215]
          Length = 155

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQAISPILDVENI 85
           +++ V  E   +   I++   +N  +++I +++ +G+ ++L DC   +   S  ++  N+
Sbjct: 12  LLKKVANEWDLKICSINIQTNQNPTVVKIIIKKTNGDDISLEDCALFNAPASEEIENSNL 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +   Y LE+SS G+   +    DF  + G  V  ++   +  K+ L G
Sbjct: 72  LNCSYVLEISSQGVSDELTSDRDFKTFKGFPVNVQLNQKNSKKKFLNG 119


>gi|227504823|ref|ZP_03934872.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
 gi|227198673|gb|EEI78721.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
          Length = 188

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 13/110 (11%)

Query: 22  AGDISSVIQPVIEE--MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDC-EELSQAISP 78
           A  ++ ++QP++E   +    V+ +   +K+   Q+ +  D       D  EE+S  IS 
Sbjct: 6   AAQLTELLQPLLEPRGLDVEDVKTTKAGKKS---QVIIRIDGDQRPSSDVLEEVSNQISE 62

Query: 79  ILDVE------NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
             D +      N   G Y LEVS+PG+D P+     + R  G +VA E+ 
Sbjct: 63  FFDAKEESGELNFGAG-YTLEVSTPGVDLPLTAPRHWRRNRGRLVAFELT 111


>gi|313829612|gb|EFS67326.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
 gi|315109016|gb|EFT80992.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
          Length = 178

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 11/165 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD--DGN-MTLRDCEELSQAISPIL 80
           ++ +++PV+ ++     ++ ++   +  L+++ ++ D  DG+  +L +  E +  IS  L
Sbjct: 6   LTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEISHCL 65

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK----LIGKI 135
           D    + E  Y LEVSS G+  P+ +   + R  GH+V     L+  ++QK      G+I
Sbjct: 66  DDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLV--RFTLNPAEEQKSGETFDGRI 123

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
               E    LE E    K    L           A+ +V  EL R
Sbjct: 124 AEAGEEVVTLEVEAENSKPHKPLYTTREVQLADVAKAVVQVELNR 168


>gi|227833357|ref|YP_002835064.1| hypothetical protein cauri_1533 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262184343|ref|ZP_06043764.1| hypothetical protein CaurA7_10158 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254800550|sp|C3PH22|RIMP_CORA7 RecName: Full=Ribosome maturation factor rimP
 gi|227454373|gb|ACP33126.1| hypothetical protein cauri_1533 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 188

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 70  EELSQAISPILDVE------NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           EELSQ IS I D +      N   G Y LEVS+PG+D P+     + R  G +V   +  
Sbjct: 54  EELSQEISEIFDAQEEAGTLNFGAG-YTLEVSTPGVDFPLSASRHWRRNQGRLVGYALAE 112

Query: 124 SSGDKQKLIGKIMGTSE 140
             G  +  + +I   SE
Sbjct: 113 EPGTTR--VARIGALSE 127


>gi|152965408|ref|YP_001361192.1| hypothetical protein Krad_1440 [Kineococcus radiotolerans SRS30216]
 gi|189038696|sp|A6W7Y9|RIMP_KINRD RecName: Full=Ribosome maturation factor rimP
 gi|151359925|gb|ABS02928.1| protein of unknown function DUF150 [Kineococcus radiotolerans
           SRS30216]
          Length = 208

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           E  Y LEVSSPG+DRP+     + R  G +V    VL+ G    L+ +++   E G 
Sbjct: 80  EAPYTLEVSSPGVDRPLTTPRHWSRARGRLVRA--VLTDG--TALLVRVVSVDEAGV 132


>gi|314923906|gb|EFS87737.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
 gi|314966034|gb|EFT10133.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
 gi|314981919|gb|EFT26012.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
 gi|315090734|gb|EFT62710.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
 gi|315094982|gb|EFT66958.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
 gi|327328083|gb|EGE69852.1| hypothetical protein HMPREF9341_01135 [Propionibacterium acnes
           HL103PA1]
          Length = 178

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD--DGN-MTLRDCEELSQAISPIL 80
           ++ +++PV+ ++     ++ ++   +  L+++ ++ D  DG+  +L +  E +  IS  L
Sbjct: 6   LTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEISHCL 65

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGKIMG 137
           D    + E  Y LEVSS G+  P+ +   + R  GH+V   +  + G K  +   G+I  
Sbjct: 66  DDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEGQKSGETFDGRIAE 125

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             E    LE E    K    +           A+ +V  EL R
Sbjct: 126 AGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKAVVQVELNR 168


>gi|227872000|ref|ZP_03990385.1| conserved hypothetical protein [Oribacterium sinus F0268]
 gi|227842143|gb|EEJ52388.1| conserved hypothetical protein [Oribacterium sinus F0268]
          Length = 108

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 40  SVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGI 99
           SV  ++    + L      +D+ +MT+ DC  +S+ +S  LD E+ I   Y LEV S G 
Sbjct: 23  SVTYTIEAGTHYLRAFIFRKDEQDMTVNDCAMVSRRLSKWLDKEDFIAEEYILEVCSLGF 82

Query: 100 -DRP 102
            D P
Sbjct: 83  KDNP 86


>gi|332878282|ref|ZP_08446008.1| hypothetical protein HMPREF9074_01747 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683733|gb|EGJ56604.1| hypothetical protein HMPREF9074_01747 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 155

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 8/110 (7%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           + + ++ D+G + + DC  LS+A+   LD E      + LEV+S G   P V    + + 
Sbjct: 34  ITVVIDGDNG-VGIDDCIALSRAVEAPLDAEG---ADFSLEVTSFGATEPFVLPRQYAKN 89

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
            G  V  +I  + G  Q+  G + G ++    LE E R  K + + +I +
Sbjct: 90  VGRTV--QITTTDGKVQE--GVLKGEADGVVTLETETREPKPVGKGKITV 135


>gi|302558073|ref|ZP_07310415.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302475691|gb|EFL38784.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 173

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 8/127 (6%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKS 107
           +  +L++ V+ D G   L    ++S+A+S  LD  + +    Y LEV +PG +R +    
Sbjct: 34  RKRVLRVVVDSDTG-ADLDRIADVSRALSAKLDETDAMGSAEYTLEVGTPGAERLLTEHR 92

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
            ++R  G +V  ++        +L  +I+   + G  LE    G K        ++FD +
Sbjct: 93  HYVRATGRLVRFQLAEGG----ELDARILRADDEGLDLEVP--GVKGRKATARRLAFDDI 146

Query: 168 LSARLIV 174
             AR+ V
Sbjct: 147 TRARVQV 153


>gi|308808390|ref|XP_003081505.1| putative aldo/keto reductase [Oryza sativa (ISS) [Ostreococcus
           tauri]
 gi|116059968|emb|CAL56027.1| putative aldo/keto reductase [Oryza sativa (ISS) [Ostreococcus
           tauri]
          Length = 297

 Score = 36.2 bits (82), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
           YE  + G +GL+      ++ + + MS R V IS L+ +  LL  F E    N T   C+
Sbjct: 117 YEEGVIGAVGLSNYGPKQLRKIHKYMSARGVPISTLQVQYHLLSRFPEL---NGTKETCD 173

Query: 71  ELS---QAISPILDVENIIEGHYRLEVSSPGI 99
           EL     A SP+     ++ G Y +E   PGI
Sbjct: 174 ELGIKLIAYSPL--ALGLLTGKYSVENPPPGI 203


>gi|315104206|gb|EFT76182.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
          Length = 245

 Score = 36.2 bits (82), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD--DGN-MTLRDCEELSQAISPIL 80
           ++ +++PV+ ++     ++ ++   +  L+++ ++ D  DG+  +L +  E +  IS  L
Sbjct: 73  LTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEISHCL 132

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGKIMG 137
           D    + E  Y LEVSS G+  P+ +   + R  GH+V   +  + G K  +   G+I  
Sbjct: 133 DDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEGQKSGETFDGRIAE 192

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             E    LE E    K    +           A+ +V  EL R
Sbjct: 193 AGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKAVVQVELNR 235


>gi|282854641|ref|ZP_06263976.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|282582223|gb|EFB87605.1| conserved hypothetical protein [Propionibacterium acnes J139]
          Length = 199

 Score = 36.2 bits (82), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD--DGN-MTLRDCEELSQAISPIL 80
           ++ +++PV+ ++     ++ ++   +  L+++ ++ D  DG+  +L +  E +  IS  L
Sbjct: 27  LTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEISHCL 86

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGKIMG 137
           D    + E  Y LEVSS G+  P+ +   + R  GH+V   +  + G K  +   G+I  
Sbjct: 87  DDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEGQKSGETFDGRIAE 146

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             E    LE E    K    +           A+ +V  EL R
Sbjct: 147 AGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKAVVQVELNR 189


>gi|256824990|ref|YP_003148950.1| hypothetical protein Ksed_11450 [Kytococcus sedentarius DSM 20547]
 gi|256688383|gb|ACV06185.1| uncharacterized conserved protein [Kytococcus sedentarius DSM
           20547]
          Length = 160

 Score = 36.2 bits (82), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 64  MTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           +TL    E ++ +S  +D ++   E  Y LEVSSPG+DRP+     F R  G  V
Sbjct: 60  ITLDQVAEATELVSTGIDADDPFGEQPYTLEVSSPGVDRPLTSLEHFRRAVGRRV 114


>gi|259586223|sp|A2C4N8|RIMP_PROM1 RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score = 35.8 bits (81), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           D  +T+ DC  LSQ I   +   +I++  + LE+SS GI   +  + DF  + G  V
Sbjct: 48  DKKVTIDDCSILSQYIDEAIQGSSILDQPFNLEISSEGISDFLTEEKDFQTFKGFPV 104


>gi|325286755|ref|YP_004262545.1| Ribosome maturation factor rimP [Cellulophaga lytica DSM 7489]
 gi|324322209|gb|ADY29674.1| Ribosome maturation factor rimP [Cellulophaga lytica DSM 7489]
          Length = 154

 Score = 35.8 bits (81), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           D  +TL+DC  +S+AI   LD E   E  + +EV+S G   P+V    + +  G  +  +
Sbjct: 40  DNGVTLKDCVAVSRAIDHNLDRE---EQDFSVEVASAGASSPLVLPRQYAKNIGRKLEVK 96

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
            +    + +   G++   +E    LE + R +K + + ++ +
Sbjct: 97  TI----EGRNFEGQLTAATEETITLEWKAREQKPVGKGKVTV 134


>gi|194335548|ref|YP_002017342.1| protein of unknown function DUF150 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|259586174|sp|B4SCE5|RIMP_PELPB RecName: Full=Ribosome maturation factor rimP
 gi|194308025|gb|ACF42725.1| protein of unknown function DUF150 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 173

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 5/91 (5%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPIL----DVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           ++I ++ DDG + +  C  +S+ +   +    D+  ++  ++ L VSSPG+  P++    
Sbjct: 40  IEILMDADDG-IRIHQCAYISRRVRERIEGDDDLLELVGENFDLMVSSPGLGEPIIIPRQ 98

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           ++R  G ++      S+GD  +L+G +   S
Sbjct: 99  YIRHVGKLLQVTYADSNGDPVELVGHLQEVS 129


>gi|296139426|ref|YP_003646669.1| hypothetical protein Tpau_1712 [Tsukamurella paurometabola DSM
           20162]
 gi|296027560|gb|ADG78330.1| protein of unknown function DUF150 [Tsukamurella paurometabola DSM
           20162]
          Length = 190

 Score = 35.8 bits (81), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VE 83
           +S+VI P + +      QI +       +   V   D   TL    +L++ +S  +D  +
Sbjct: 8   VSTVIAPHLADAGLDLEQIRITNAGPKSVIAVVVDSDAGPTLDVLADLARTLSDAVDGAD 67

Query: 84  NIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           ++  G  + LEV++PG +RP+     + R  G   A E  L+ GD
Sbjct: 68  DVFGGQAFTLEVTTPGAERPLREARHWRRARGRQAAIE--LAGGD 110


>gi|288924203|ref|ZP_06418239.1| protein of unknown function DUF150 [Frankia sp. EUN1f]
 gi|288344450|gb|EFC78943.1| protein of unknown function DUF150 [Frankia sp. EUN1f]
          Length = 325

 Score = 35.8 bits (81), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           G Y LEV+SPG+DRP+V    + R  G +V    ++   D  ++ G+++   + G  L
Sbjct: 133 GPYVLEVTSPGVDRPLVEPRHWRRAVGRLV----LVRRADGSEVEGRVLSAGDDGADL 186


>gi|213021801|ref|ZP_03336248.1| hypothetical protein Salmonelentericaenterica_03335 [Salmonella
          enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 59

 Score = 35.4 bits (80), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 29 IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
          I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I
Sbjct: 2  ITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPI 58


>gi|303326258|ref|ZP_07356701.1| transcription elongation factor [Desulfovibrio sp. 3_1_syn3]
 gi|302864174|gb|EFL87105.1| transcription elongation factor [Desulfovibrio sp. 3_1_syn3]
          Length = 156

 Score = 35.4 bits (80), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 17/89 (19%)

Query: 30  QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-----------------NMTLRDCEEL 72
           +PV+  +      + +++   + +++FV+   G                 + ++  CEE+
Sbjct: 37  EPVVRSLGLVIWGVEVVQAGRMAVRLFVDVPSGAPESLQAADGEENEAPTSASIGQCEEI 96

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDR 101
           S+ +   L+VE+ +   Y LEVS+PG+ R
Sbjct: 97  SRHLGLALEVEDAVPSAYVLEVSTPGLTR 125


>gi|329936657|ref|ZP_08286364.1| hypothetical protein SGM_1856 [Streptomyces griseoaurantiacus M045]
 gi|329303887|gb|EGG47770.1| hypothetical protein SGM_1856 [Streptomyces griseoaurantiacus M045]
          Length = 179

 Score = 35.4 bits (80), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 61  DGNMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
           D    L    ++S+A+S  LD  + +  G Y LEV +PG +R +     ++R    +V  
Sbjct: 45  DTGADLDRVADVSRALSAKLDETDAMGAGEYTLEVGTPGAERALTEHRHYVRALDRLVRF 104

Query: 120 EIVLSSGDKQKLIGKIMGTSETGFFLE 146
           ++     +  +L+ +I+G  E G  LE
Sbjct: 105 QLR----EGGELVARILGVDEEGLDLE 127


>gi|91207995|sp|Q46J16|RIMP_PROMT RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           D  +T+ DC  LSQ I   +   +I++  + LE+SS GI   +  + DF  + G  V
Sbjct: 48  DKKVTIDDCSILSQYIDEAIQGSSILDQPFNLEISSEGIGDFLTEEKDFQTFKGFPV 104


>gi|50842973|ref|YP_056200.1| hypothetical protein PPA1495 [Propionibacterium acnes KPA171202]
 gi|289428787|ref|ZP_06430470.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|295131044|ref|YP_003581707.1| hypothetical protein HMPREF0675_4562 [Propionibacterium acnes
           SK137]
 gi|81611447|sp|Q6A7M3|RIMP_PROAC RecName: Full=Ribosome maturation factor rimP
 gi|50840575|gb|AAT83242.1| conserved protein [Propionibacterium acnes KPA171202]
 gi|289158185|gb|EFD06405.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|291375538|gb|ADD99392.1| conserved hypothetical protein [Propionibacterium acnes SK137]
 gi|313763590|gb|EFS34954.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
 gi|313773528|gb|EFS39494.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
 gi|313793984|gb|EFS42008.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
 gi|313801371|gb|EFS42622.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
 gi|313807950|gb|EFS46431.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
 gi|313811581|gb|EFS49295.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
 gi|313813359|gb|EFS51073.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
 gi|313816770|gb|EFS54484.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
 gi|313819519|gb|EFS57233.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
 gi|313822157|gb|EFS59871.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
 gi|313823609|gb|EFS61323.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
 gi|313825932|gb|EFS63646.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
 gi|313831321|gb|EFS69035.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
 gi|313834931|gb|EFS72645.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
 gi|313839908|gb|EFS77622.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
 gi|314914744|gb|EFS78575.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
 gi|314919294|gb|EFS83125.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
 gi|314920796|gb|EFS84627.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
 gi|314924648|gb|EFS88479.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
 gi|314930475|gb|EFS94306.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
 gi|314954367|gb|EFS98773.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
 gi|314957447|gb|EFT01550.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
 gi|314962085|gb|EFT06186.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
 gi|314963664|gb|EFT07764.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
 gi|314968508|gb|EFT12606.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
 gi|314974196|gb|EFT18292.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
 gi|314976695|gb|EFT20790.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
 gi|314978821|gb|EFT22915.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
 gi|314984333|gb|EFT28425.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
 gi|314986522|gb|EFT30614.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
 gi|314990881|gb|EFT34972.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
 gi|315079514|gb|EFT51507.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
 gi|315081256|gb|EFT53232.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
 gi|315083454|gb|EFT55430.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
 gi|315087140|gb|EFT59116.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
 gi|315089312|gb|EFT61288.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
 gi|315095335|gb|EFT67311.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
 gi|315099218|gb|EFT71194.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
 gi|315100431|gb|EFT72407.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
 gi|315106775|gb|EFT78751.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
 gi|327328402|gb|EGE70164.1| hypothetical protein HMPREF9338_01419 [Propionibacterium acnes
           HL096PA2]
 gi|327329732|gb|EGE71488.1| hypothetical protein HMPREF9337_01796 [Propionibacterium acnes
           HL096PA3]
 gi|327334249|gb|EGE75963.1| hypothetical protein HMPREF9344_01150 [Propionibacterium acnes
           HL097PA1]
 gi|327444189|gb|EGE90843.1| hypothetical protein HMPREF9571_02320 [Propionibacterium acnes
           HL043PA2]
 gi|327444932|gb|EGE91586.1| hypothetical protein HMPREF9570_01994 [Propionibacterium acnes
           HL043PA1]
 gi|327446417|gb|EGE93071.1| hypothetical protein HMPREF9568_00999 [Propionibacterium acnes
           HL013PA2]
 gi|327451994|gb|EGE98648.1| hypothetical protein HMPREF9584_02200 [Propionibacterium acnes
           HL092PA1]
 gi|327454969|gb|EGF01624.1| hypothetical protein HMPREF9581_01157 [Propionibacterium acnes
           HL087PA3]
 gi|327457745|gb|EGF04400.1| hypothetical protein HMPREF9586_00321 [Propionibacterium acnes
           HL083PA2]
 gi|328752172|gb|EGF65788.1| hypothetical protein HMPREF9563_02441 [Propionibacterium acnes
           HL020PA1]
 gi|328755196|gb|EGF68812.1| hypothetical protein HMPREF9579_01223 [Propionibacterium acnes
           HL087PA1]
 gi|328758324|gb|EGF71940.1| hypothetical protein HMPREF9588_00964 [Propionibacterium acnes
           HL025PA2]
 gi|328760060|gb|EGF73640.1| hypothetical protein HMPREF9343_02215 [Propionibacterium acnes
           HL099PA1]
 gi|332675924|gb|AEE72740.1| ribosome maturation factor RimP [Propionibacterium acnes 266]
          Length = 178

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 11/165 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD--DGN-MTLRDCEELSQAISPIL 80
           ++ +++PV+ ++     ++ ++   +  L+++ ++ D  DG+  +L +  E +  IS  L
Sbjct: 6   LTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEISHCL 65

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK----LIGKI 135
           D    + E  Y LEVSS G+  P+ +   + R  GH+V     L+  ++QK      G+I
Sbjct: 66  DDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLV--RFTLNPAEEQKSGETFDGRI 123

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
               E    LE E    K    +           A+ +V  EL R
Sbjct: 124 AEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKAVVQVELNR 168


>gi|127511141|ref|YP_001092338.1| 1A family penicillin-binding protein [Shewanella loihica PV-4]
 gi|126636436|gb|ABO22079.1| penicillin-binding protein, 1A family [Shewanella loihica PV-4]
          Length = 861

 Score = 35.4 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 114 GHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G + A  I+ ++G K +    I      GFFL +EK   + + E+ +A+  +  LS + I
Sbjct: 100 GIIRAAVILATTGKKSQGASTITQQVARGFFLSREKTYIRKIKEIFLALKIEQALSKKEI 159

Query: 174 VTDELLRASLNN--YG 187
           +T  L R+ L N  YG
Sbjct: 160 LTLYLNRSFLGNRAYG 175


>gi|213865085|ref|ZP_03387204.1| hypothetical protein SentesT_35167 [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
          Length = 57

 Score = 35.4 bits (80), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 28 VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
          +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+
Sbjct: 1  MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVED 56


>gi|320169451|gb|EFW46350.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 413

 Score = 35.4 bits (80), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           ++GD SS+ +PV+ +   + V  +    +  LL+ F   DD N  +R    + ++ SP L
Sbjct: 22  ISGDSSSITKPVLSQEQVKHVLATYFGIQAELLKEFPSYDDLNYFVRGVGVVVESASPAL 81

Query: 81  -DVENIIEGHYRLEVSSPGIDR 101
             +EN     Y L++++ G DR
Sbjct: 82  AQIENGASHEYVLKINNCGEDR 103


>gi|124026597|ref|YP_001015712.1| hypothetical protein NATL1_18921 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961665|gb|ABM76448.1| DUF150 [Prochlorococcus marinus str. NATL1A]
          Length = 183

 Score = 35.0 bits (79), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           D  +T+ DC  LSQ I   +   +I++  + LE+SS GI   +  + DF  + G  V
Sbjct: 75  DKKVTIDDCSILSQYIDEAIQGSSILDQPFNLEISSEGISDFLTEEKDFQTFKGFPV 131


>gi|163786552|ref|ZP_02181000.1| hypothetical protein FBALC1_15242 [Flavobacteriales bacterium
           ALC-1]
 gi|159878412|gb|EDP72468.1| hypothetical protein FBALC1_15242 [Flavobacteriales bacterium
           ALC-1]
          Length = 154

 Score = 35.0 bits (79), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 8/111 (7%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           ++I ++ D+G + + DC  +S+AI   +D +   E  + LEV S G   P+     + + 
Sbjct: 33  IKIVIDGDNG-VLVEDCMYISRAIEHNIDRD---EHDFSLEVLSSGATTPLTLPRQYKKH 88

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS 163
            G     ++ + + D Q L GK++  +E G  L  + R  K + + ++ ++
Sbjct: 89  IGR----DLEVKTNDSQSLEGKLIDVNEQGVVLTWKAREPKPVGKGKVTVT 135


>gi|254526613|ref|ZP_05138665.1| hypothetical protein P9202_1265 [Prochlorococcus marinus str. MIT
           9202]
 gi|221538037|gb|EEE40490.1| hypothetical protein P9202_1265 [Prochlorococcus marinus str. MIT
           9202]
          Length = 155

 Score = 35.0 bits (79), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 23/108 (21%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQAISPILDVENI 85
           +++ V  E   +   +++   +N  +++I +++ +G+ ++L DC   +   S  ++  N+
Sbjct: 12  LLKKVANEWDLKICSLNIQTNQNPTVVKITIKKTNGDDISLEDCALFNAPASEEIENSNL 71

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +   Y LE+SS G+   +    DF  + G  V  ++   +  K+ L G
Sbjct: 72  LNCSYVLEISSQGVSDELTSDRDFKTFKGFPVNVQLNQKNSKKKFLNG 119


>gi|289426404|ref|ZP_06428147.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|289153132|gb|EFD01850.1| conserved hypothetical protein [Propionibacterium acnes SK187]
          Length = 197

 Score = 35.0 bits (79), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 11/165 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD--DGN-MTLRDCEELSQAISPIL 80
           ++ +++PV+ ++     ++ ++   +  L+++ ++ D  DG+  +L +  E +  IS  L
Sbjct: 25  LTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEISHCL 84

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK----LIGKI 135
           D    + E  Y LEVSS G+  P+ +   + R  GH+V     L+  ++QK      G+I
Sbjct: 85  DDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLV--RFTLNPAEEQKSGETFDGRI 142

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
               E    LE E    K    +           A+ +V  EL R
Sbjct: 143 AEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKAVVQVELNR 187


>gi|239917226|ref|YP_002956784.1| hypothetical protein Mlut_06980 [Micrococcus luteus NCTC 2665]
 gi|281414300|ref|ZP_06246042.1| hypothetical protein MlutN2_03688 [Micrococcus luteus NCTC 2665]
 gi|239838433|gb|ACS30230.1| uncharacterized conserved protein [Micrococcus luteus NCTC 2665]
          Length = 195

 Score = 35.0 bits (79), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 53  LQIFVERDDGN--MTLRDCEELSQAISPILD-----VENIIEGHYRLEVSSPGIDRPMVR 105
           +++ ++R  G   ++L D   LS  +S  LD     V  +  G Y LEV++ G+DRP+  
Sbjct: 42  VEVVLDRASGTYGLSLDDVARLSGRVSAALDALGDHVPGVGAGEYLLEVTTAGVDRPLTE 101

Query: 106 KSDFLRWNGHVVACEI 121
                R  G +V   +
Sbjct: 102 PRHLARNVGRLVEVSV 117


>gi|163839409|ref|YP_001623814.1| putative cytoplasmic protein [Renibacterium salmoninarum ATCC
           33209]
 gi|162952885|gb|ABY22400.1| hypothetical cytosolic protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 149

 Score = 34.7 bits (78), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 2/108 (1%)

Query: 58  ERDDGNMTLRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHV 116
           E   G++ L    E+S A+S  LD +   +G  + LEVSSPG+ R +     + R  G +
Sbjct: 9   EDQQGSVGLDKIAEVSLALSSALDADPEDDGRPFDLEVSSPGVGRSLTELRHWRRALGRM 68

Query: 117 VACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISF 164
              ++  S    + L G+I+  S  G  +  E   +K M   Q    F
Sbjct: 69  ATLKLRKSE-QGESLFGRIIEVSPDGVKIRPELPVKKGMKPKQAEPEF 115


>gi|72382860|ref|YP_292215.1| hypothetical protein PMN2A_1022 [Prochlorococcus marinus str.
           NATL2A]
 gi|72002710|gb|AAZ58512.1| conserved hypothetical protein [Prochlorococcus marinus str.
           NATL2A]
          Length = 183

 Score = 34.7 bits (78), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 30/57 (52%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           D  +T+ DC  LSQ I   +   +I++  + LE+SS GI   +  + DF  + G  V
Sbjct: 75  DKKVTIDDCSILSQYIDEAIQGSSILDQPFNLEISSEGIGDFLTEEKDFQTFKGFPV 131


>gi|111023600|ref|YP_706572.1| hypothetical protein RHA1_ro06641 [Rhodococcus jostii RHA1]
 gi|123339654|sp|Q0S222|RIMP_RHOSR RecName: Full=Ribosome maturation factor rimP
 gi|110823130|gb|ABG98414.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 190

 Score = 34.7 bits (78), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 46  LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMV 104
           L  ++  ++I V+ D G + L     LS  IS + D V +  E  Y LEV+SPGI RP+ 
Sbjct: 31  LAGRHSAVRIMVDSDAG-LELDAVANLSHEISEVFDSVSDFGESPYTLEVTSPGIGRPLT 89

Query: 105 RK 106
            +
Sbjct: 90  HE 91


>gi|21673078|ref|NP_661143.1| hypothetical protein CT0239 [Chlorobium tepidum TLS]
 gi|34222902|sp|Q8KFT3|RIMP_CHLTE RecName: Full=Ribosome maturation factor rimP
 gi|21646149|gb|AAM71485.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 173

 Score = 34.7 bits (78), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 15/138 (10%)

Query: 53  LQIFVERDDGNMTLRDCEELSQAISPILDV----ENIIEGHYRLEVSSPGIDRPMVRKSD 108
           +++ V+ D G +++  C +LS+AI   L+       +  G + L VSSPGI  P+  +  
Sbjct: 39  IELTVDTDKG-VSIDQCAKLSRAIRARLEACEEDSMLSSGEFDLMVSSPGIGEPIQVQRQ 97

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTS------ETGFFLE--KEKRGEKDMNELQI 160
           +LR  G ++    +      +++ GK++  +      +    +E  KE R ++   E  +
Sbjct: 98  YLRHLGRLIRVNYLDEEEQPKEITGKLLEAAVGPEAEQPSITIEAVKEGRKKRTAGEPPV 157

Query: 161 AISFDSLLSARLIVTDEL 178
            I    ++  R +V  EL
Sbjct: 158 TIRLADVV--RAVVQTEL 173


>gi|313836821|gb|EFS74535.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
 gi|314929770|gb|EFS93601.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
 gi|314972199|gb|EFT16296.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
 gi|328907627|gb|EGG27391.1| hypothetical protein PA08_0657 [Propionibacterium sp. P08]
          Length = 178

 Score = 34.3 bits (77), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 7/163 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD--DGN-MTLRDCEELSQAISPIL 80
           ++S+++P +  +      + ++   +  L+++ V+ D  DG+  +L +  E +  IS  L
Sbjct: 6   LTSLLEPAVSRLGLELDCVDVVPAGRRRLVRVTVDGDGPDGHGPSLDEISEATAEISRCL 65

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGKIMG 137
           D  + + E  Y LEVSS G+  P+ +   + R  GH+V   +  S G    +   G+I  
Sbjct: 66  DDSDAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPSEGQTSGEAFDGRITE 125

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             E    LE E    K    +           A+ +V  EL R
Sbjct: 126 AGEEVVTLEVEAGNSKPHKPVYTTREVQLADVAKAVVQVELNR 168


>gi|123969227|ref|YP_001010085.1| hypothetical protein A9601_16951 [Prochlorococcus marinus str.
           AS9601]
 gi|166980197|sp|A2BT67|RIMP_PROMS RecName: Full=Ribosome maturation factor rimP
 gi|123199337|gb|ABM70978.1| DUF150 [Prochlorococcus marinus str. AS9601]
          Length = 155

 Score = 34.3 bits (77), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 51  LLLQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
           ++++I + + +G+ ++L DC   +   S  ++  N++   Y LE+SS G+   +  + DF
Sbjct: 36  VVIEITIRKTNGDDISLDDCALFNTPASDEIEKSNLLNCSYVLEISSQGVSDELTSERDF 95

Query: 110 LRWNGHVVACEI 121
             + G  V  E+
Sbjct: 96  KTFKGFPVNVEL 107


Searching..................................................done


Results from round 2




>gi|254780789|ref|YP_003065202.1| hypothetical protein CLIBASIA_03400 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040466|gb|ACT57262.1| hypothetical protein CLIBASIA_03400 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 192

 Score =  250 bits (640), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 192/192 (100%), Positives = 192/192 (100%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD
Sbjct: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE
Sbjct: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR
Sbjct: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180

Query: 181 ASLNNYGSYAGL 192
           ASLNNYGSYAGL
Sbjct: 181 ASLNNYGSYAGL 192


>gi|209883665|ref|YP_002287522.1| hypothetical protein OCAR_4512 [Oligotropha carboxidovorans OM5]
 gi|226706198|sp|B6JCS7|RIMP_OLICO RecName: Full=Ribosome maturation factor rimP
 gi|209871861|gb|ACI91657.1| hypothetical protein OCAR_4512 [Oligotropha carboxidovorans OM5]
          Length = 260

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 106/186 (56%), Gaps = 1/186 (0%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM 64
               S  EPR+  + G+A  ++++ +PV+E + +R V+I +  E    +QI  ER DG M
Sbjct: 9   ETATSTAEPRLVVEPGVAARVAAIAEPVLEGLGYRLVRIKISGEAGCTVQIMAERPDGTM 68

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            + DCE +S+A+SP++DV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+   
Sbjct: 69  LIDDCEAVSKALSPVMDVADPIQRAYRLEISSPGIDRPLVRQSDFERYTGHLVKIEMAAP 128

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNEL-QIAISFDSLLSARLIVTDELLRASL 183
              +++  G + G  +    + ++     +  +     +    + SA L++TD+L+  S+
Sbjct: 129 HEGRKRFRGTLQGIEDNLVRITRDDAKSHEGAQPADARLPLADIASAHLVLTDQLIAESM 188

Query: 184 NNYGSY 189
                 
Sbjct: 189 RRGRDA 194


>gi|49473873|ref|YP_031915.1| hypothetical protein BQ02060 [Bartonella quintana str. Toulouse]
 gi|51316597|sp|Q6G0N9|RIMP_BARQU RecName: Full=Ribosome maturation factor rimP
 gi|49239376|emb|CAF25709.1| hypothetical protein BQ02060 [Bartonella quintana str. Toulouse]
          Length = 216

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 74/188 (39%), Positives = 118/188 (62%), Gaps = 2/188 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T  ++   EPR+F + G+   +++++ P+++ + FR V++ LL +  L LQI VER 
Sbjct: 9   MRKTEKMNDIDEPRLFEETGIEAFVAALVIPLLKPLDFRLVRVKLLGQNGLTLQIMVERA 68

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE +S+ +S +LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 69  DGSMTIEDCETVSRTVSHLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHIAKIE 128

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             ++   ++K  G +   ++ G  L  +K        + IAI FD+++ A L++TDEL+R
Sbjct: 129 TKITIDGRKKFRGILANITQEGLTLNTDKAAY--GEAMYIAIPFDNIIDAHLVLTDELIR 186

Query: 181 ASLNNYGS 188
            +L     
Sbjct: 187 NALKKNKD 194


>gi|327192407|gb|EGE59367.1| hypothetical protein RHECNPAF_224004 [Rhizobium etli CNPAF512]
          Length = 201

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/187 (42%), Positives = 124/187 (66%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M       ++ EPR+  + GL   ++ +I+PV+  M FR +++ +L +  + +Q+  ER+
Sbjct: 1   MSDMTNADNELEPRLITETGLDQRLADIIEPVLVGMGFRLIRVRMLNQNGMTMQVMAERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT++DCEE+S AISP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE
Sbjct: 61  DGTMTVQDCEEVSMAISPVLDVEDPIDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +  G++++  GKI+     GF LE+++       E +++I F +L  A+LI+TD+L+R
Sbjct: 121 TSIMIGNRKRFRGKIVEADADGFTLERDQIAY--GEEPKVSIPFTALSDAKLILTDDLIR 178

Query: 181 ASLNNYG 187
            +L    
Sbjct: 179 DALRADK 185


>gi|15963989|ref|NP_384342.1| hypothetical protein SMc02911 [Sinorhizobium meliloti 1021]
 gi|307306401|ref|ZP_07586145.1| protein of unknown function DUF150 [Sinorhizobium meliloti BL225C]
 gi|307319288|ref|ZP_07598717.1| protein of unknown function DUF150 [Sinorhizobium meliloti AK83]
 gi|34222989|sp|Q92SW6|RIMP_RHIME RecName: Full=Ribosome maturation factor rimP
 gi|15073165|emb|CAC41673.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306895124|gb|EFN25881.1| protein of unknown function DUF150 [Sinorhizobium meliloti AK83]
 gi|306902243|gb|EFN32840.1| protein of unknown function DUF150 [Sinorhizobium meliloti BL225C]
          Length = 205

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 84/181 (46%), Positives = 120/181 (66%), Gaps = 2/181 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T    +  EPR+  + GL   ++ +I+PV+ +M FR V++ +  +  L LQ+  ER+
Sbjct: 1   MSDTTTAENTNEPRLITETGLDRRVADIIEPVLVDMGFRLVRVRMSGQNGLTLQVMTERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCEE+S+AISP+LDVE+ I+  Y LEVSSPGIDRPMVR+SDF+RW GH+V CE
Sbjct: 61  DGTMTVEDCEEVSKAISPVLDVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +++  GKI+   E GF LE+++       E  +AI F +L  ARLI+TDEL+R
Sbjct: 121 TSVMVDGRKRFRGKIVSVDEDGFRLERDQPAY--GEEAAVAIPFTALSEARLILTDELIR 178

Query: 181 A 181
            
Sbjct: 179 D 179


>gi|222084329|ref|YP_002542858.1| hypothetical protein Arad_0177 [Agrobacterium radiobacter K84]
 gi|221721777|gb|ACM24933.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 246

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 79/191 (41%), Positives = 123/191 (64%), Gaps = 2/191 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           +       +  EPR+  + GL   I+++I+PVI  M +R V++ L+ +  L LQ+  ER+
Sbjct: 46  LSEVTNADNINEPRLIVETGLDQRIAAIIEPVIVGMDYRLVRVRLMNQNGLTLQVMAERN 105

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+M ++ CEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RWNGH+V CE
Sbjct: 106 DGSMNVQGCEEISTAISPVLDVEDPVDKAYHLEVSSPGIDRPMVRKSDFVRWNGHIVKCE 165

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +   ++++  GKI   ++ GF +E+++       E ++ I F +L  A+LI+TD+L+R
Sbjct: 166 TSILVDNRKRFRGKITDVNDDGFTIERDQVAY--GEEPKVTIPFSTLAEAKLILTDDLIR 223

Query: 181 ASLNNYGSYAG 191
            +L        
Sbjct: 224 DALRADKQAKA 234


>gi|154244253|ref|YP_001415211.1| hypothetical protein Xaut_0296 [Xanthobacter autotrophicus Py2]
 gi|259645219|sp|A7IC11|RIMP_XANP2 RecName: Full=Ribosome maturation factor rimP
 gi|154158338|gb|ABS65554.1| protein of unknown function DUF150 [Xanthobacter autotrophicus Py2]
          Length = 286

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 62/185 (33%), Positives = 103/185 (55%), Gaps = 2/185 (1%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMT 65
            L    EPR+  + G+A  ++++   V+  + +R V++ +       LQI  ER DG M+
Sbjct: 7   VLDDPNEPRLITETGVAARVAAIASGVLGALGYRLVRVKVTNRDGGTLQIMAERPDGTMS 66

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           + DCE  S+A+SP+LDVE+ I   YRLE+SSPGIDRP+VR+SDF+RW GH V  E+    
Sbjct: 67  IDDCEAASRALSPVLDVEDPISSAYRLEMSSPGIDRPLVRQSDFVRWAGHEVKVEMARPV 126

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
             +++  G ++G  +    + +         E  + +    +  A+L++TD L+R +L  
Sbjct: 127 DGRKRFRGILIGAEDGIAVVRRLDA--PATEEPTVRLPVADIHDAKLMLTDALIREALRA 184

Query: 186 YGSYA 190
             +  
Sbjct: 185 AKAAG 189


>gi|259417818|ref|ZP_05741737.1| hypothetical protein SCH4B_3234 [Silicibacter sp. TrichCH4B]
 gi|259346724|gb|EEW58538.1| hypothetical protein SCH4B_3234 [Silicibacter sp. TrichCH4B]
          Length = 244

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ +  V+I L+  K   LQI  +R DG + + DC  +S 
Sbjct: 46  LIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKATTLQIMADRPDGGIEVDDCAAISN 105

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 106 AVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRRFKGE 165

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 166 LAGIEDDEVLINIEEHGET----VTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGVL 219


>gi|315122011|ref|YP_004062500.1| hypothetical protein CKC_01305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495413|gb|ADR52012.1| hypothetical protein CKC_01305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 186

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 134/186 (72%), Positives = 159/186 (85%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           MESTH   SKYEPRIFGD+GL  D+S++IQPVIEEM FR VQ+SLLEE+NL+LQI VERD
Sbjct: 1   MESTHVFCSKYEPRIFGDVGLGQDVSNIIQPVIEEMGFRIVQVSLLEERNLILQILVERD 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G MTL DCEE+S+AISPILDVENIIE HY+LE+SSPGI+RPMVRKSDF RWNGH+VACE
Sbjct: 61  NGTMTLCDCEEVSKAISPILDVENIIEEHYQLEISSPGINRPMVRKSDFERWNGHIVACE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           +  SSGDK+KL+GKI+G S+  FFLEK++   KD    QIA+SFDSLLSA+L++TDELL 
Sbjct: 121 VASSSGDKKKLVGKIVGKSDLDFFLEKKEEDLKDAGVSQIAVSFDSLLSAKLVITDELLC 180

Query: 181 ASLNNY 186
           ASLN  
Sbjct: 181 ASLNRK 186


>gi|190889788|ref|YP_001976330.1| hypothetical protein RHECIAT_CH0000156 [Rhizobium etli CIAT 652]
 gi|259586183|sp|B3PXE6|RIMP_RHIE6 RecName: Full=Ribosome maturation factor rimP
 gi|190695067|gb|ACE89152.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 198

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/181 (43%), Positives = 123/181 (67%), Gaps = 2/181 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             ++ EPR+  + GL   ++ +I+PV+  M FR +++ +L +  + +Q+  ER+DG MT+
Sbjct: 4   ADNELEPRLITETGLDQRLADIIEPVLVGMGFRLIRVRMLNQNGMTMQVMAERNDGTMTV 63

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DCEE+S AISP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +  G
Sbjct: 64  QDCEEVSMAISPVLDVEDPIDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSIMIG 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           ++++  GKI+     GF LE+++       E +++I F +L  A+LI+TD+L+R +L   
Sbjct: 124 NRKRFRGKIVEADADGFTLERDQIAY--GEEPKVSIPFTALSDAKLILTDDLIRDALRAD 181

Query: 187 G 187
            
Sbjct: 182 K 182


>gi|163733004|ref|ZP_02140448.1| hypothetical protein RLO149_10100 [Roseobacter litoralis Och 149]
 gi|161393539|gb|EDQ17864.1| hypothetical protein RLO149_10100 [Roseobacter litoralis Och 149]
          Length = 231

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K+ +LQI  ++ DG + + DC E+SQ
Sbjct: 40  LIAKAAIDRRMAEIITPVIEDMGFELVRVRLMSGKSTILQIMADKPDGGIEVDDCAEISQ 99

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 100 AVSAVLDVEDPILDEYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETGEMIDGRRRFKGA 159

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E        E  I + FD L  A+L++TD+L++  L    +    
Sbjct: 160 LAGVENDEVLINVE--------EGTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGAF 209


>gi|118590497|ref|ZP_01547899.1| hypothetical protein SIAM614_02941 [Stappia aggregata IAM 12614]
 gi|118436960|gb|EAV43599.1| hypothetical protein SIAM614_02941 [Stappia aggregata IAM 12614]
          Length = 197

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/181 (36%), Positives = 109/181 (60%), Gaps = 2/181 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S +EPRI  + GL   ++++++PVIE++ +R V+  +  +    LQI  ER DG MT+ D
Sbjct: 2   SAHEPRIVTEQGLDARVAAIVEPVIEDLGYRLVRTKISAQNGCTLQIMAERPDGTMTVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP LDVE+ I   Y LEVSSPGIDRP+VR  DF RW GH +  E+ +    +
Sbjct: 62  CETVSRAVSPALDVEDPINRAYHLEVSSPGIDRPLVRAGDFNRWAGHELKVEMAVMLDGR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  G ++G       +       ++  E  +A+  +++  A+L++TD+L+ A+L    +
Sbjct: 122 KRFRGTLLGAENGMASIRLPD--VREGEEDTVALPLENIGEAKLVLTDDLITAALQAEKA 179

Query: 189 Y 189
            
Sbjct: 180 A 180


>gi|158421641|ref|YP_001522933.1| hypothetical protein AZC_0017 [Azorhizobium caulinodans ORS 571]
 gi|158328530|dbj|BAF86015.1| uncharacterized protein [Azorhizobium caulinodans ORS 571]
          Length = 329

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 2/189 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T       EPR+  + G+A  I++++ PV+ +++ R V++ +        QI  ER 
Sbjct: 39  MNETVEALDPNEPRLITESGVAARIAAIVTPVLADLNLRLVRVKVTARDGGTCQIMAERP 98

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE  S+AISP+LDVE+ I G YRLE+SSPGIDRP+VR +DF RW GH V  E
Sbjct: 99  DGSMTIDDCEAASRAISPVLDVEDPITGAYRLEISSPGIDRPLVRLTDFDRWAGHEVKVE 158

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           + +    +++  G ++GT      +++         E ++++    +  A+L++TD L+ 
Sbjct: 159 MAVPVDGRKRFRGILIGTRAELAVVKRTDA--PKGEEPEVSLPVADIGEAKLVLTDALIT 216

Query: 181 ASLNNYGSY 189
            +L    + 
Sbjct: 217 EALRRAKAA 225


>gi|49475030|ref|YP_033071.1| hypothetical protein BH02180 [Bartonella henselae str. Houston-1]
 gi|51316602|sp|Q6G4W4|RIMP_BARHE RecName: Full=Ribosome maturation factor rimP
 gi|49237835|emb|CAF27030.1| hypothetical protein BH02180 [Bartonella henselae str. Houston-1]
          Length = 216

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 76/188 (40%), Positives = 115/188 (61%), Gaps = 2/188 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T  +    EPR+F + G+   I++ + P+++ + FR V++ LL    L LQI VER 
Sbjct: 9   MSKTERISDIDEPRLFEENGVEAHIAAFVMPLLKPLGFRLVRVKLLGLNGLTLQIMVERP 68

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE +S+ +SP+LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 69  DGSMTVEDCETVSRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHIAKIE 128

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    ++K  G +   ++ GF L  +K        + I+I FD ++ A L++TDEL+R
Sbjct: 129 TKIILEGRRKFRGTLTNITQDGFTLNTDKAAY--GESMYISIPFDDIIDAHLVLTDELIR 186

Query: 181 ASLNNYGS 188
            +L     
Sbjct: 187 DALKKNKD 194


>gi|254510275|ref|ZP_05122342.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
 gi|221533986|gb|EEE36974.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
          Length = 232

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 4/190 (2%)

Query: 3   STHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG 62
               + +     +     +   ++ +I PVIE++ +  V+I L+  K   +QI  ++ DG
Sbjct: 29  PDDRVENLMTNNLIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTMQIMADKPDG 88

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            + + DC E+S A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E  
Sbjct: 89  GIEVDDCAEISNAVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFETFEGYEAKIETA 148

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
                +++  G++ G       +   +  E     + I + FD L  A+L++TD+L++  
Sbjct: 149 ELIDGRRRFKGELAGIEGDEVLINIPEGDET----ITIGLQFDWLSDAKLVLTDDLIKEM 204

Query: 183 LNNYGSYAGL 192
           L        L
Sbjct: 205 LRQRKDAGAL 214


>gi|170750128|ref|YP_001756388.1| hypothetical protein Mrad2831_3730 [Methylobacterium radiotolerans
           JCM 2831]
 gi|259585788|sp|B1LX00|RIMP_METRJ RecName: Full=Ribosome maturation factor rimP
 gi|170656650|gb|ACB25705.1| protein of unknown function DUF150 [Methylobacterium radiotolerans
           JCM 2831]
          Length = 257

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 66/187 (35%), Positives = 100/187 (53%)

Query: 3   STHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG 62
           S+       E R+  + G+A  ++  I+  +  + FR V++ +       +QI  ER DG
Sbjct: 2   SSEIEADLSEKRLVREAGVAARVAQAIEGPLAGLGFRLVRVRMSNVNGCTVQIMAERPDG 61

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
             T+ DCE +S+AISPILDV++ + G Y LEVSSPGIDRP+VR SDF RW G+    E+ 
Sbjct: 62  TFTIDDCEAVSRAISPILDVDDPVGGAYNLEVSSPGIDRPLVRVSDFARWAGYEAKVELS 121

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
                +++  G +     TG  +  +    K+    +I +    L  A L++TDEL+R S
Sbjct: 122 PPLDGRKRFRGILGAPDPTGTTVPIDLPDVKEGLPSRIDLPLKDLAEAHLVLTDELIRES 181

Query: 183 LNNYGSY 189
           L   G  
Sbjct: 182 LRRGGPP 188


>gi|220924483|ref|YP_002499785.1| hypothetical protein Mnod_4615 [Methylobacterium nodulans ORS 2060]
 gi|219949090|gb|ACL59482.1| protein of unknown function DUF150 [Methylobacterium nodulans ORS
           2060]
          Length = 238

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 2/187 (1%)

Query: 3   STHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG 62
             H      E R+  + G+A  ++ +++P +E + FR V++ +  +    +QI  ER DG
Sbjct: 40  PDHHPADAAEKRLITETGVAARVAQIVEPSLEGLGFRLVRVRVTGQNGCTVQIMAERPDG 99

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            MT+ DCE +S+ ISP+LDV++ I   Y LE+SSPGIDRP+VR  DF RW GH    E+ 
Sbjct: 100 TMTVEDCESVSRTISPLLDVDDPIGRAYHLEISSPGIDRPLVRVGDFARWAGHEAKVELT 159

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +    +++  G I         ++     E       + +    +  A L++TD L+R S
Sbjct: 160 VPLEGRKRFRGIIRAPEGESVRIDLPDAKEGTPASYDLRLR--DIGEAHLVLTDALIRES 217

Query: 183 LNNYGSY 189
           L    + 
Sbjct: 218 LRRGSAP 224


>gi|86355779|ref|YP_467671.1| hypothetical protein RHE_CH00119 [Rhizobium etli CFN 42]
 gi|123513435|sp|Q2KDZ2|RIMP_RHIEC RecName: Full=Ribosome maturation factor rimP
 gi|86279881|gb|ABC88944.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 198

 Score =  214 bits (545), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 79/181 (43%), Positives = 121/181 (66%), Gaps = 2/181 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             ++ EPR+  + GL   ++ +I+PV+  M FR +++ +L +    +Q+  ER+DG MT+
Sbjct: 4   ADNELEPRLITETGLDQRLADIIEPVLVGMGFRLIRVRMLNQNGATMQVMAERNDGTMTV 63

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DCEE+S AISP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +  G
Sbjct: 64  QDCEEVSMAISPVLDVEDPIDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSIMIG 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           ++++  GKI+     GF LE+++       E ++ I F +L  A+LI+TD+L+R +L   
Sbjct: 124 NRKRFRGKIVEADADGFTLERDQVAY--GEEQKVIIPFTALSDAKLILTDDLIRDALRAD 181

Query: 187 G 187
            
Sbjct: 182 K 182


>gi|91974716|ref|YP_567375.1| hypothetical protein RPD_0234 [Rhodopseudomonas palustris BisB5]
 gi|123749481|sp|Q13EL5|RIMP_RHOPS RecName: Full=Ribosome maturation factor rimP
 gi|91681172|gb|ABE37474.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           BisB5]
          Length = 262

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/184 (35%), Positives = 107/184 (58%), Gaps = 2/184 (1%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMT 65
              +  EPR+  + G+A   ++V +PV++ M +R V+I +  E    +QI  ER DG M 
Sbjct: 10  VPDTLAEPRLVVEPGVAARFAAVAEPVLQAMGYRLVRIKVSGEAGCTVQIMAERPDGTML 69

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           + DCE +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR SDF R++GH+V  E+ +  
Sbjct: 70  IDDCEAVSRALSPVLDVTDPIDRAYRLEISSPGIDRPLVRSSDFARYSGHLVKIEMAVPH 129

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
             +++  G + G       +++E  G     +  + +    +  ARL++TDEL+  S+  
Sbjct: 130 QGRKRYRGLLDGVEGDAIRIQRE--GVTKDEDPLVLLPMHDIGDARLVLTDELVAESMRR 187

Query: 186 YGSY 189
               
Sbjct: 188 GKQA 191


>gi|325291534|ref|YP_004277398.1| hypothetical protein AGROH133_02929 [Agrobacterium sp. H13-3]
 gi|325059387|gb|ADY63078.1| hypothetical protein AGROH133_02929 [Agrobacterium sp. H13-3]
          Length = 198

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/178 (42%), Positives = 114/178 (64%), Gaps = 2/178 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             + +EPR+  + G+   I+ +I+PV+  M +  V++ L  +  + LQ+  ER+DG MT+
Sbjct: 2   ADTVHEPRLITETGIDQRIAEIIEPVLTGMGYLLVRVRLSNQNGMTLQVMAEREDGTMTV 61

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
             CE +S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF RW GH+V  E  +   
Sbjct: 62  EGCEAVSMAISPVLDVEDPVDKAYHLEVSSPGIDRPMVRKSDFTRWQGHLVKAETSILVE 121

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           ++++  GKI+     GF LE+++    D  E  + I F +L  A+LI+TD+L+R +L 
Sbjct: 122 NRKRFRGKIVEVDADGFKLERDQIAYGD--EPTVTIPFSALSDAKLILTDDLIRDALR 177


>gi|240849884|ref|YP_002971272.1| hypothetical protein Bgr_02280 [Bartonella grahamii as4aup]
 gi|240267007|gb|ACS50595.1| hypothetical protein Bgr_02280 [Bartonella grahamii as4aup]
          Length = 216

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 117/187 (62%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M     + +  EPR+F + G+   +++++ P+++ + FR V++ LL +  L LQI VER 
Sbjct: 9   MNEAEKISNLDEPRLFEEDGIEAQVAALVIPLLKPLGFRLVRVKLLGQNGLTLQIMVERA 68

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE +S+ +SP+LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 69  DGSMTVEDCETVSRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHLAKIE 128

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             ++   ++K  G +   ++ GF L  +K        +   ISF  +++A L++TDEL+R
Sbjct: 129 TKITIDGRRKFRGTLTNITQDGFILNTDKAAY--GEAMYTPISFCDIINAHLVLTDELIR 186

Query: 181 ASLNNYG 187
            +L    
Sbjct: 187 DALKKNK 193


>gi|56694992|ref|YP_165338.1| hypothetical protein SPO0064 [Ruegeria pomeroyi DSS-3]
 gi|81350793|sp|Q5LWL1|RIMP_SILPO RecName: Full=Ribosome maturation factor rimP
 gi|56676729|gb|AAV93395.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 208

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVI ++ +  V+I L+  K+  LQI  ++ DG + + DC  +S 
Sbjct: 5   LIAKAAIDRRLAEIVSPVIADLGYELVRIRLMSGKSTTLQIMADKPDGGIEVDDCAAISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETTEMIDGRRRFRGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  ++ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGIEGNEVLINLDQNGET----VTIGLEFDWLSDAKLVLTDDLIKEMLRQRKAAGVL 178


>gi|241207072|ref|YP_002978168.1| hypothetical protein Rleg_4390 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860962|gb|ACS58629.1| protein of unknown function DUF150 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 201

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/187 (41%), Positives = 122/187 (65%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M       ++ EPR+  + GL   ++ +I+PV+ ++ FR +++ ++ +    +Q+  ERD
Sbjct: 1   MSDLTNADNEREPRLITETGLDQRLADIIEPVLVDLGFRLIRVRMMNQNGATMQVMAERD 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT++DCEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE
Sbjct: 61  DGTMTVQDCEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +   ++++  GKI+     GF LE+++       E ++ I F +L  A+LI+TD+L+R
Sbjct: 121 TSILIDNRKRFRGKIVEAGTDGFTLERDQIAY--GEEQKVTIPFTALSDAKLILTDDLIR 178

Query: 181 ASLNNYG 187
            +L    
Sbjct: 179 DALRADK 185


>gi|116249894|ref|YP_765732.1| hypothetical protein RL0128 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|166977860|sp|Q1MN36|RIMP_RHIL3 RecName: Full=Ribosome maturation factor rimP
 gi|115254542|emb|CAK05616.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 201

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 76/187 (40%), Positives = 122/187 (65%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M       ++ EPR+  + GL   ++ +I+PV+ ++ FR +++ ++ +    +Q+  ER+
Sbjct: 1   MSDLTNADNEREPRLITETGLDQRLADIIEPVLVDLGFRLIRVRMMNQNGATMQVMAERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT++DCEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE
Sbjct: 61  DGTMTVQDCEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +   ++++  GKI+     GF LE+++       E ++ I F +L  A+LI+TD+L+R
Sbjct: 121 TSILIDNRKRFRGKIVEAGTDGFTLERDQIAY--GEEQKVTIPFTALSDAKLILTDDLIR 178

Query: 181 ASLNNYG 187
            +L    
Sbjct: 179 DALRADK 185


>gi|259585702|sp|A8IG16|RIMP_AZOC5 RecName: Full=Ribosome maturation factor rimP
          Length = 291

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 2/189 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T       EPR+  + G+A  I++++ PV+ +++ R V++ +        QI  ER 
Sbjct: 1   MNETVEALDPNEPRLITESGVAARIAAIVTPVLADLNLRLVRVKVTARDGGTCQIMAERP 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE  S+AISP+LDVE+ I G YRLE+SSPGIDRP+VR +DF RW GH V  E
Sbjct: 61  DGSMTIDDCEAASRAISPVLDVEDPITGAYRLEISSPGIDRPLVRLTDFDRWAGHEVKVE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           + +    +++  G ++GT      +++         E ++++    +  A+L++TD L+ 
Sbjct: 121 MAVPVDGRKRFRGILIGTRAELAVVKRTDA--PKGEEPEVSLPVADIGEAKLVLTDALIT 178

Query: 181 ASLNNYGSY 189
            +L    + 
Sbjct: 179 EALRRAKAA 187


>gi|39933516|ref|NP_945792.1| hypothetical protein RPA0439 [Rhodopseudomonas palustris CGA009]
 gi|51316646|sp|Q6NCN2|RIMP_RHOPA RecName: Full=Ribosome maturation factor rimP
 gi|39647362|emb|CAE25883.1| DUF150 [Rhodopseudomonas palustris CGA009]
          Length = 259

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 2/182 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
               EPR+  + G+A    +V +PV+  M +R V+I +  +    +QI  ER DG M + 
Sbjct: 12  DDLAEPRLVIEPGVAARFCAVAEPVLMAMGYRLVRIKVSGDAGCTVQIMAERPDGTMLID 71

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ +    
Sbjct: 72  DCEAVSRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFARYAGHLVKIEMAVPHQG 131

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G + G       +++E   + +  +  + +    +  ARL++TDEL+  S+    
Sbjct: 132 RKRYRGLLDGVEGDAVRVQREGATKDE--DPLVLLPMHDIGDARLVLTDELIAESMRRGK 189

Query: 188 SY 189
             
Sbjct: 190 QA 191


>gi|150398624|ref|YP_001329091.1| hypothetical protein Smed_3438 [Sinorhizobium medicae WSM419]
 gi|166990840|sp|A6UF26|RIMP_SINMW RecName: Full=Ribosome maturation factor rimP
 gi|150030139|gb|ABR62256.1| protein of unknown function DUF150 [Sinorhizobium medicae WSM419]
          Length = 205

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 81/181 (44%), Positives = 119/181 (65%), Gaps = 2/181 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T    +  EPR+  + GL   ++ +I+PV+ ++ FR V++ +  +  L LQ+  ER+
Sbjct: 1   MSDTTTAENANEPRLITETGLDRRVADIIEPVLVDLGFRLVRVRMSGQNGLTLQVMTERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCEE+S+AISP+LDVE+ I+  Y LEVSSPGIDRPMVR+SDF+RW GH++ CE
Sbjct: 61  DGTMTVEDCEEVSKAISPVLDVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLLKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +++  GKI+   E GF LE+++       E  + I F +L  ARLI+TDEL+R
Sbjct: 121 TSVLVEGRKRFRGKIVSVDEDGFRLERDQPAY--GEEAGVTIPFTALSEARLILTDELIR 178

Query: 181 A 181
            
Sbjct: 179 D 179


>gi|260431716|ref|ZP_05785687.1| hypothetical protein SL1157_0822 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415544|gb|EEX08803.1| hypothetical protein SL1157_0822 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 196

 Score =  211 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ +  V+I L+  K   LQI  ++ DG + + DC E+S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKQTTLQIMADKPDGGIEVDDCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKLETTELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +      E     + I + FD L  A+L++TD+L++  L        L
Sbjct: 125 LAGVEGDEVLINIPNGDET----VTIGLQFDWLSDAKLVLTDDLIKEMLRQRKDAGAL 178


>gi|254475663|ref|ZP_05089049.1| hypothetical protein RR11_1501 [Ruegeria sp. R11]
 gi|214029906|gb|EEB70741.1| hypothetical protein RR11_1501 [Ruegeria sp. R11]
          Length = 196

 Score =  211 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V+I L+  K   LQI  ++ DG + + DC E+S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGFELVRIRLMSGKTTTLQIMADKPDGGIEVDDCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDAYALEVSSPGIDRPLTRLKDFDMFEGYEAKIETTELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  E    +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGVEEDEVLINIEEHGET----VTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGTL 178


>gi|92115661|ref|YP_575390.1| hypothetical protein Nham_0028 [Nitrobacter hamburgensis X14]
 gi|122418985|sp|Q1QS67|RIMP_NITHX RecName: Full=Ribosome maturation factor rimP
 gi|91798555|gb|ABE60930.1| protein of unknown function DUF150 [Nitrobacter hamburgensis X14]
          Length = 263

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 67/177 (37%), Positives = 113/177 (63%), Gaps = 2/177 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  +SSV+ PV++ M +R V+I +  E    +QI  ER DG+M + DCE
Sbjct: 15  DEPRLVVEPGVAARVSSVVAPVLQGMGYRLVRIKVSGEYGCTVQIMAERPDGSMQIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R  GH+V  E+ ++   +++
Sbjct: 75  AISKALSPVLDVADPIDKAYRLEISSPGIDRPLVRRSDFERHAGHLVKVEMAVAHQGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
             G + G  +    L ++    ++++E ++ +  + +  ARL++TDEL+  S+    
Sbjct: 135 FRGILQGVKDNAIRLHRDD--VQNVDESEVLLVMEDIADARLVLTDELIAESMRRGK 189


>gi|254465218|ref|ZP_05078629.1| hypothetical protein RBY4I_1824 [Rhodobacterales bacterium Y4I]
 gi|206686126|gb|EDZ46608.1| hypothetical protein RBY4I_1824 [Rhodobacterales bacterium Y4I]
          Length = 196

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ +  V+I L+  K+  LQI  ++ +G + + DC E+S 
Sbjct: 5   LIAKAAIDRRLAEIVTPVIEDLGYELVRIRLMSGKSTTLQIMADKPNGGIEVDDCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E   + G +++  G+
Sbjct: 65  AVSAALDVEDPIIDAYALEVSSPGIDRPLTRMKDFEMFEGYEAKLETAETVGGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT      +  E +G+     + + + FD L  A+L++TD+L++  L        L
Sbjct: 125 LAGTEGDEVLINIEDQGQT----VTVGLKFDWLSDAKLVLTDDLIKEMLRQRKEAGTL 178


>gi|170740832|ref|YP_001769487.1| hypothetical protein M446_2614 [Methylobacterium sp. 4-46]
 gi|259585789|sp|B0UL53|RIMP_METS4 RecName: Full=Ribosome maturation factor rimP
 gi|168195106|gb|ACA17053.1| protein of unknown function DUF150 [Methylobacterium sp. 4-46]
          Length = 201

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 2/183 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
           H   E R+  + G+A  ++ +++P +E + FR V++ +  +    +QI  ER DG MT+ 
Sbjct: 7   HHATEKRLITETGVAARVAQIVEPSLEGLGFRLVRVRVTGQNGCTVQIMAERPDGTMTVE 66

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE +S+ ISP+LDV++ I   Y LE+SSPGIDRP+VR  DF RW GH    E+ +    
Sbjct: 67  DCEAVSRTISPLLDVDDPIGRAYHLEISSPGIDRPLVRAGDFARWAGHEAKVELAVPLEG 126

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G I         ++     E      ++ ++   +  A L++TD+L+R SL    
Sbjct: 127 RKRFRGLIRAPEGATVRIDLPDAKEGTPASYELRLA--DIGEAHLVLTDDLIRESLRRGS 184

Query: 188 SYA 190
           + A
Sbjct: 185 APA 187


>gi|259585712|sp|B9JGT7|RIMP_AGRRK RecName: Full=Ribosome maturation factor rimP
          Length = 198

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 79/185 (42%), Positives = 122/185 (65%), Gaps = 2/185 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             +  EPR+  + GL   I+++I+PVI  M +R V++ L+ +  L LQ+  ER+DG+M +
Sbjct: 4   ADNINEPRLIVETGLDQRIAAIIEPVIVGMDYRLVRVRLMNQNGLTLQVMAERNDGSMNV 63

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           + CEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RWNGH+V CE  +   
Sbjct: 64  QGCEEISTAISPVLDVEDPVDKAYHLEVSSPGIDRPMVRKSDFVRWNGHIVKCETSILVD 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           ++++  GKI   ++ GF +E+++       E ++ I F +L  A+LI+TD+L+R +L   
Sbjct: 124 NRKRFRGKITDVNDDGFTIERDQVAY--GEEPKVTIPFSTLAEAKLILTDDLIRDALRAD 181

Query: 187 GSYAG 191
                
Sbjct: 182 KQAKA 186


>gi|254502830|ref|ZP_05114981.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
 gi|222438901|gb|EEE45580.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
          Length = 198

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 66/181 (36%), Positives = 105/181 (58%), Gaps = 2/181 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S  EPRI  + GL   ++++I+PVIE++ +R V+  +       LQI  ER DG MT+ D
Sbjct: 2   SDQEPRIVTEQGLDARVAAIIEPVIEDLGYRLVRTRISAANGCTLQIMAERPDGTMTVDD 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP LDVE+ I   Y LEVSSPGIDRP+VR  DF RW GH +  E+ +    +
Sbjct: 62  CETISRAVSPALDVEDPINRAYHLEVSSPGIDRPLVRAGDFDRWAGHEMKVEMDVMQDGR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  G ++G       +      E + +   + +  + +  A+L++TD+L+ A+L    +
Sbjct: 122 KRFRGTLLGVEGVSAKMRLPDAPEGEAD--TVLLPMEDIGEAKLVLTDDLITAALQAEKA 179

Query: 189 Y 189
            
Sbjct: 180 A 180


>gi|259585810|sp|B8IEB0|RIMP_METNO RecName: Full=Ribosome maturation factor rimP
          Length = 203

 Score =  211 bits (537), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 2/187 (1%)

Query: 3   STHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG 62
             H      E R+  + G+A  ++ +++P +E + FR V++ +  +    +QI  ER DG
Sbjct: 5   PDHHPADAAEKRLITETGVAARVAQIVEPSLEGLGFRLVRVRVTGQNGCTVQIMAERPDG 64

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            MT+ DCE +S+ ISP+LDV++ I   Y LE+SSPGIDRP+VR  DF RW GH    E+ 
Sbjct: 65  TMTVEDCESVSRTISPLLDVDDPIGRAYHLEISSPGIDRPLVRVGDFARWAGHEAKVELT 124

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +    +++  G I         ++     E       + +    +  A L++TD L+R S
Sbjct: 125 VPLEGRKRFRGIIRAPEGESVRIDLPDAKEGTPASYDLRLR--DIGEAHLVLTDALIRES 182

Query: 183 LNNYGSY 189
           L    + 
Sbjct: 183 LRRGSAP 189


>gi|15887444|ref|NP_353125.1| hypothetical protein Atu0090 [Agrobacterium tumefaciens str. C58]
 gi|34222929|sp|Q8UJ48|RIMP_AGRT5 RecName: Full=Ribosome maturation factor rimP
 gi|15154957|gb|AAK85910.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 198

 Score =  211 bits (537), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 113/178 (63%), Gaps = 2/178 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             +  EPR+  + G+   I+ +I+PV+  M +  V++ L  +  + LQ+  ER+DG M +
Sbjct: 2   ADTAQEPRLITETGIDQRIAEIIEPVLTGMGYLLVRVRLSNQNGMTLQVMAEREDGTMNV 61

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DCE +S AISP+LDVE+ +E  Y LEVSSPGIDRPMVRK+DF RW GH+V  E  +   
Sbjct: 62  QDCEAISMAISPVLDVEDPVEKAYHLEVSSPGIDRPMVRKTDFTRWQGHLVKVETSILVE 121

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           ++++  GKI+      F LE+++       E  + + F++L  A+LI+TD+L+R +L 
Sbjct: 122 NRKRFRGKIVEVDADSFKLERDQIAY--GEEPTVVVPFNALSDAKLILTDDLIRDALR 177


>gi|192288874|ref|YP_001989479.1| hypothetical protein Rpal_0443 [Rhodopseudomonas palustris TIE-1]
 gi|226706186|sp|B3QAB7|RIMP_RHOPT RecName: Full=Ribosome maturation factor rimP
 gi|192282623|gb|ACE99003.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           TIE-1]
          Length = 259

 Score =  211 bits (537), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 63/182 (34%), Positives = 104/182 (57%), Gaps = 2/182 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
               EPR+  + G+A    +V +PV+  M +R V+I +  +    +QI  ER DG M + 
Sbjct: 12  DDLAEPRLVIEPGVAARFCAVAEPVLMAMGYRLVRIKVSGDAGCTVQIMAERPDGTMLID 71

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE  S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ +    
Sbjct: 72  DCEAASRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFARYAGHLVKIEMAVPHQG 131

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G + G       +++E   + +  +  + +    +  ARL++TDEL+  S+    
Sbjct: 132 RKRYRGLLDGVEGDAVRVQREGATKDE--DPLVLLPMHDIGDARLVLTDELIAESMRRGK 189

Query: 188 SY 189
             
Sbjct: 190 QA 191


>gi|319405102|emb|CBI78706.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 207

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 82/191 (42%), Positives = 117/191 (61%), Gaps = 2/191 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M +   +    EPR+F + G+A  +S++I P+++ + F  +   LL    L LQI VER 
Sbjct: 18  MNAIERMDDINEPRLFEEDGVAARVSALIIPLLKPLGFHLICTKLLSLNGLTLQIMVERT 77

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G MT++DCE +S+ ++P+LD+ENIIE  Y LEVSSPGIDRP+VRKSDF  W GH+   E
Sbjct: 78  NGTMTIKDCEIVSRTVAPLLDIENIIERKYHLEVSSPGIDRPLVRKSDFFHWQGHLAKIE 137

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  +QK  GK+   +++GF L  EK    D  E  I I F ++ +ARLI+TDEL+R
Sbjct: 138 TSTIIDGRQKFRGKLTDITQSGFTLNIEKTA--DREEANIFIPFSNITNARLILTDELIR 195

Query: 181 ASLNNYGSYAG 191
            +L      A 
Sbjct: 196 DTLKKNKDCAN 206


>gi|227824068|ref|YP_002828041.1| hypothetical protein NGR_c35650 [Sinorhizobium fredii NGR234]
 gi|254765072|sp|C3MC63|RIMP_RHISN RecName: Full=Ribosome maturation factor rimP
 gi|227343070|gb|ACP27288.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 205

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 82/181 (45%), Positives = 118/181 (65%), Gaps = 2/181 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M          EPR+  + GL   I+ +I+PV+ +M FR V++ +  +  L LQI  ER+
Sbjct: 1   MSDPTTAEIANEPRLITETGLDRRIADIIEPVLVQMGFRLVRVRMSGQNGLTLQIMTERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCE++S+A+SP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH++ CE
Sbjct: 61  DGTMTVEDCEDVSKAVSPVLDVEDPIDKAYHLEVSSPGIDRPMVRKSDFVRWQGHLMKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +++  GKI+   E GF LE+++       E  +AI F +L  ARLI+TD+L+R
Sbjct: 121 TSIMVDGRKRFRGKIVSVDEEGFRLERDQPAY--GEEAVVAIPFTALSDARLILTDDLIR 178

Query: 181 A 181
            
Sbjct: 179 D 179


>gi|319898340|ref|YP_004158433.1| hypothetical protein BARCL_0162 [Bartonella clarridgeiae 73]
 gi|319402304|emb|CBI75843.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 207

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 77/178 (43%), Positives = 115/178 (64%), Gaps = 2/178 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
              EPR+F + G+A  ++++I P+++ + FR V+I LL    L LQI  ER +G MT+ D
Sbjct: 29  DIDEPRLFEEDGIAARVAALIAPLLKPLGFRLVRIKLLGLNGLTLQIMAERANGTMTIED 88

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+ ++P+LD+ENIIE  Y LE+SSPGIDRP+VRKSDF  W GH+   E   +   +
Sbjct: 89  CETVSRTVAPLLDIENIIERKYHLEISSPGIDRPLVRKSDFFHWQGHLAKIETSTAINGR 148

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           QK  GK++  ++ GF L  +K    D  E+   ISF ++ +A L++TDEL+R +L   
Sbjct: 149 QKFRGKLINVAQNGFTLNIDKTA--DGEEMHEFISFSNITNAHLVLTDELIRDTLKKN 204


>gi|27375897|ref|NP_767426.1| hypothetical protein bll0786 [Bradyrhizobium japonicum USDA 110]
 gi|34222841|sp|Q89WA6|RIMP_BRAJA RecName: Full=Ribosome maturation factor rimP
 gi|27349035|dbj|BAC46051.1| bll0786 [Bradyrhizobium japonicum USDA 110]
          Length = 251

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 111/179 (62%), Gaps = 2/179 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  +S+V  PV++ M +R V+I +  E    +QI  ER DG+M + DCE 
Sbjct: 16  EPRLVVEPGVAARVSAVAGPVLQGMGYRLVRIRISGEAGCTVQIMAERPDGSMQIEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ ++   +++ 
Sbjct: 76  ISRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFERYAGHLVKVEMAVAHEGRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
            G I         L+++    K   E  + ++ + +  ARL++TDEL+  S+    + A
Sbjct: 136 RGMIGAVEGDRVHLQRDD--VKAGEERNVLLTMEDISEARLVLTDELIAESMRRGKAAA 192


>gi|163867514|ref|YP_001608713.1| hypothetical protein Btr_0242 [Bartonella tribocorum CIP 105476]
 gi|259585727|sp|A9IMU4|RIMP_BART1 RecName: Full=Ribosome maturation factor rimP
 gi|161017160|emb|CAK00718.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 208

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 73/188 (38%), Positives = 117/188 (62%), Gaps = 2/188 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M     + +  EPR+F + G+   +++++ P+++ + FR V++ LL +  L LQI VER 
Sbjct: 1   MNEAEKISNLDEPRLFEEDGIEARVAALVIPLLKPLGFRLVRVKLLGQNGLTLQIMVERA 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG++T+ DCE +S+ +SP+LDVEN+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 61  DGSLTVEDCETVSRTVSPLLDVENVIERKYHLEISSPGIDRPLVRKSDFFHWQGHLAKIE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             ++   ++K  G +   ++ GF L  +K        +  +ISF  ++ A L++TDEL+R
Sbjct: 121 TKITIDGRRKFRGTLTNITQDGFILNADKAAY--GEAMYTSISFCDIIGAHLVLTDELIR 178

Query: 181 ASLNNYGS 188
            +L     
Sbjct: 179 DALKKNKD 186


>gi|99082749|ref|YP_614903.1| hypothetical protein TM1040_2909 [Ruegeria sp. TM1040]
 gi|122397499|sp|Q1GCH5|RIMP_SILST RecName: Full=Ribosome maturation factor rimP
 gi|99039029|gb|ABF65641.1| protein of unknown function DUF150 [Ruegeria sp. TM1040]
          Length = 203

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ +  V+I L+  K   LQI  +R DG + + DC  +S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTLQIMADRPDGGIEVDDCAAISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGIEDDEVLINIEEHGET----VTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGVL 178


>gi|85714178|ref|ZP_01045167.1| hypothetical protein NB311A_08478 [Nitrobacter sp. Nb-311A]
 gi|85699304|gb|EAQ37172.1| hypothetical protein NB311A_08478 [Nitrobacter sp. Nb-311A]
          Length = 259

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/177 (35%), Positives = 108/177 (61%), Gaps = 2/177 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  ++++  PV++ M +R V+I +  E    LQI  ER DG+M + DCE
Sbjct: 15  DEPRLVLEPGVAARVATIAAPVLQGMGYRLVRIKVSGEAGCTLQIMAERPDGSMQIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ +SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+   E+ ++   +++
Sbjct: 75  TISKMLSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFERYAGHLAKVEMAVAHQGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
             G + G  +    L ++    +  N+  + +  + +  ARL++TDEL+  S+    
Sbjct: 135 FRGILRGVEDNAVRLHRDD--VQQDNDADVLLIMEDIADARLVLTDELIAESMRRGK 189


>gi|299133376|ref|ZP_07026571.1| protein of unknown function DUF150 [Afipia sp. 1NLS2]
 gi|298593513|gb|EFI53713.1| protein of unknown function DUF150 [Afipia sp. 1NLS2]
          Length = 264

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 61/179 (34%), Positives = 106/179 (59%), Gaps = 1/179 (0%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           E R+  + G+A  ++++ +PV+E + ++ V+I +  E    +QI  ER DG M + DCE 
Sbjct: 21  ERRLVVEPGVAARVAAIAEPVLEGLGYQLVRIKISGEAGCTVQIMAERPDGTMLIDDCEA 80

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP++DV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ +    +++ 
Sbjct: 81  ISKALSPVMDVADPIQRAYRLEISSPGIDRPLVRQSDFERYTGHLVKIEMSVPHDGRKRF 140

Query: 132 IGKIMGTSETGFFLEKEKRGE-KDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
            G + G       + ++   E K   E  + +    + SA L++T+EL+  S+      
Sbjct: 141 RGTLEGIENGLVRITRDDVKEHKGAQEADVQLPLADIASANLVLTNELIAESMRRGRDA 199


>gi|110677787|ref|YP_680794.1| hypothetical protein RD1_0389 [Roseobacter denitrificans OCh 114]
 gi|123065971|sp|Q16D35|RIMP_ROSDO RecName: Full=Ribosome maturation factor rimP
 gi|109453903|gb|ABG30108.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 196

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K+ +LQI  +R DG + + DC E+SQ
Sbjct: 5   LIAKAAIDRRMAEIITPVIEDMGFELVRVRLMSGKSTILQIMADRPDGGIEVDDCAEISQ 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  AVSAVLDVEDPILDEYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETGDMVDGRRRFKGA 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E        E  I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGVEDDEVLINIE--------EGTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGAL 174


>gi|163757747|ref|ZP_02164836.1| hypothetical protein HPDFL43_20092 [Hoeflea phototrophica DFL-43]
 gi|162285249|gb|EDQ35531.1| hypothetical protein HPDFL43_20092 [Hoeflea phototrophica DFL-43]
          Length = 205

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/181 (42%), Positives = 114/181 (62%), Gaps = 2/181 (1%)

Query: 4   THFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN 63
           T    S YEPR+  + G+   I+ +++PV+  +  R V++ L  +  L LQI  ER DG 
Sbjct: 2   TDNAASAYEPRLVTETGVDARIAEIVEPVLASIDMRLVRVRLSGQNGLTLQIMAERTDGT 61

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           MT+ DCE  S+A+SP+LDVE+ +E  Y LE+SSPGIDRP+VRKSDF RW GH+  C+  +
Sbjct: 62  MTVEDCEAASRALSPVLDVEDPVEKAYHLEISSPGIDRPLVRKSDFERWQGHLARCDASV 121

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +++  G I   S+TGF +E+++       E +  I F +L  A+L++TDEL+R SL
Sbjct: 122 LINGRKRFRGFIRDVSDTGFIVERDQPVY--GEENRAEIPFSALAEAKLVLTDELIRESL 179

Query: 184 N 184
            
Sbjct: 180 R 180


>gi|319406548|emb|CBI80190.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 225

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/188 (44%), Positives = 120/188 (63%), Gaps = 2/188 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M     +    EPR+F + G+A  +S++I P+++ + FR V+  LL    L LQI VER 
Sbjct: 18  MNEIERMDDIDEPRLFEEDGVAARVSALIIPLLKPLGFRLVRTKLLGLNGLTLQIMVERT 77

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G MT+ DCE +S+A++P+LDVENIIE  Y LEVSSPGIDRP+VRKSDF+ W GH+   E
Sbjct: 78  NGTMTIEDCEIVSRAVAPLLDVENIIERKYHLEVSSPGIDRPLVRKSDFIHWQGHLAKIE 137

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  +QKL GK+   ++ GF L  EK   ++  ++ + ISF ++ +A LI+TDEL+R
Sbjct: 138 TSTIIDGRQKLRGKLKDITQNGFTLNIEKTAHRE--KVNVFISFSNITNAHLILTDELIR 195

Query: 181 ASLNNYGS 188
            +L     
Sbjct: 196 DTLKKNKD 203


>gi|209551641|ref|YP_002283558.1| hypothetical protein Rleg2_4070 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226706118|sp|B5ZW32|RIMP_RHILW RecName: Full=Ribosome maturation factor rimP
 gi|209537397|gb|ACI57332.1| protein of unknown function DUF150 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 201

 Score =  208 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/187 (41%), Positives = 122/187 (65%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M       ++ EPR+  + GL   ++ +I+PV+  + FR +++ +L +  + +Q+  ER+
Sbjct: 1   MSDMTNAGNELEPRLITETGLDQRLADIIEPVLIGIGFRLIRVRMLNQNGVTMQVMAERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT++DCEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE
Sbjct: 61  DGTMTVQDCEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +   ++++  GKI+     GF LE+++       E ++ I F +L  A+LI+TD+L+R
Sbjct: 121 TSILIDNRKRFRGKIVEAGVDGFTLERDQVAY--GEEQKVTIPFTALSDAKLILTDDLIR 178

Query: 181 ASLNNYG 187
            +L    
Sbjct: 179 DALRADK 185


>gi|319408014|emb|CBI81668.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 211

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 72/187 (38%), Positives = 116/187 (62%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           +  T  +++  EPR+F + G+ G +++++ P+++ +S+R +++       L LQI  ER 
Sbjct: 4   INETETINNIDEPRLFKEDGIEGRVAALVSPLLKPLSYRLIRVKFSGLNGLTLQIMAERT 63

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCE +S+ +SP LDV+NIIE  Y LE+SSPGIDRP+VRKSDF +W GHV   E
Sbjct: 64  DGTMTIEDCEIISRTVSPFLDVQNIIERKYHLEISSPGIDRPLVRKSDFFKWQGHVAKIE 123

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +QK  G +   ++  F L  +K    ++ +  + I F  + +ARL++TDEL+R
Sbjct: 124 TGVVINGRQKFRGTLTNITQNSFTLNTDKASHGEIAD--VLIPFADVTNARLVLTDELIR 181

Query: 181 ASLNNYG 187
            +L    
Sbjct: 182 DALKKDK 188


>gi|86136806|ref|ZP_01055384.1| hypothetical protein MED193_14067 [Roseobacter sp. MED193]
 gi|85826130|gb|EAQ46327.1| hypothetical protein MED193_14067 [Roseobacter sp. MED193]
          Length = 196

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ +  V+I L+  K   LQI  ++ +G + + DC  +S 
Sbjct: 5   LIAKAAIDRRLAEILIPVIEDLGYELVRIRLMSGKTTTLQIMADKPEGGIEVDDCAVVSS 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E     G +++  G+
Sbjct: 65  AVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETDELVGGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT E    +  E +G+     + I + FD L  A+L++TD+L+   L    +   L
Sbjct: 125 LAGTEEDEVLINIEDQGKT----VTIGLKFDWLSDAKLVLTDDLITEMLRQRKAAGTL 178


>gi|163852119|ref|YP_001640162.1| hypothetical protein Mext_2700 [Methylobacterium extorquens PA1]
 gi|218530877|ref|YP_002421693.1| hypothetical protein Mchl_2926 [Methylobacterium chloromethanicum
           CM4]
 gi|259585785|sp|B7KQK1|RIMP_METC4 RecName: Full=Ribosome maturation factor rimP
 gi|259585786|sp|A9W685|RIMP_METEP RecName: Full=Ribosome maturation factor rimP
 gi|163663724|gb|ABY31091.1| protein of unknown function DUF150 [Methylobacterium extorquens
           PA1]
 gi|218523180|gb|ACK83765.1| protein of unknown function DUF150 [Methylobacterium
           chloromethanicum CM4]
          Length = 251

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 64/184 (34%), Positives = 100/184 (54%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGRTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ +   Y LEVSSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECEAVSRAISPILDLEDPVGDAYYLEVSSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
            +++  G I   S  G  +  +    K     +I +    L  A L++TDEL+R SL   
Sbjct: 121 GRKRFRGIIGVPSADGTTVPIDLPDVKPGLPSRIDVPLRDLGEAHLVLTDELIRESLRRG 180

Query: 187 GSYA 190
            +  
Sbjct: 181 SAPP 184


>gi|254561863|ref|YP_003068958.1| hypothetical protein METDI3462 [Methylobacterium extorquens DM4]
 gi|254269141|emb|CAX25105.1| conserved hypothetical protein, UPF0090 protein [Methylobacterium
           extorquens DM4]
          Length = 251

 Score =  207 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 64/184 (34%), Positives = 100/184 (54%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGRTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ +   Y LEVSSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECEAVSRAISPILDLEDPVGDAYYLEVSSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
            +++  G I   S  G  +  +    K     +I +    L  A L++TDEL+R SL   
Sbjct: 121 GRKRFRGIIGVPSADGTTVPIDLPDVKPGLPSRIDVPLRDLGEAHLVLTDELIRESLRRG 180

Query: 187 GSYA 190
            +  
Sbjct: 181 SAPP 184


>gi|149912924|ref|ZP_01901458.1| hypothetical protein RAZWK3B_03010 [Roseobacter sp. AzwK-3b]
 gi|149813330|gb|EDM73156.1| hypothetical protein RAZWK3B_03010 [Roseobacter sp. AzwK-3b]
          Length = 190

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K  LLQI  ER +G + + DC ++S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDMGFELVRVRLMGGKTHLLQIMAERPEGGIEVDDCAKISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  AVSAVLDVEDPVTDPYTLEVSSPGIDRPLTRLKDFADFEGYEAKIETSELIDGRKRFKGV 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E        E  + + FD L  A+L++TDEL++  L    +   L
Sbjct: 125 LAGVEDDEVLINIE--------EGTVGLKFDWLSDAKLVLTDELIKEMLKARKAAGTL 174


>gi|328545920|ref|YP_004306029.1| ribosome maturation factor rimP [polymorphum gilvum SL003B-26A1]
 gi|326415660|gb|ADZ72723.1| Ribosome maturation factor rimP [Polymorphum gilvum SL003B-26A1]
          Length = 205

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 109/180 (60%), Gaps = 2/180 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S +E RI  + GL   ++++++PVIE++ +R V++ +       LQI  ER DG MT+ D
Sbjct: 2   SLHEARIVIEQGLEARVAAIVEPVIEDLGYRLVRVKISAANGCTLQIMAERPDGTMTVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S+A+SP LDV++ I   Y LE+SSPGIDRP+VR  DF RW+GHV   E+ +    +
Sbjct: 62  CEEVSRAVSPALDVDDPINRAYHLEISSPGIDRPLVRVGDFDRWSGHVAKVEMSVMQDGR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  G ++G  +    L      +   +E  + +    +  ARL++TD+L+RA+L    +
Sbjct: 122 KRFRGILLGAGDGTVRLRLTDTPKDVADE--VRLPLAEIAEARLVLTDDLIRAALQAEKA 179


>gi|240139448|ref|YP_002963923.1| hypothetical protein MexAM1_META1p2893 [Methylobacterium extorquens
           AM1]
 gi|240009420|gb|ACS40646.1| conserved hypothetical protein, UPF0090 protein [Methylobacterium
           extorquens AM1]
          Length = 251

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 64/184 (34%), Positives = 100/184 (54%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGRTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ +   Y LEVSSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECEAVSRAISPILDLEDPVGDAYYLEVSSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
            +++  G I   S  G  +  +    K     +I +    L  A L++TDEL+R SL   
Sbjct: 121 GRKRFRGIIGVPSADGTTVPIDLPDVKPGLLSRIDVPLRDLGEAHLVLTDELIRESLRRG 180

Query: 187 GSYA 190
            +  
Sbjct: 181 SAPP 184


>gi|163742657|ref|ZP_02150043.1| hypothetical protein RG210_07209 [Phaeobacter gallaeciensis 2.10]
 gi|161384242|gb|EDQ08625.1| hypothetical protein RG210_07209 [Phaeobacter gallaeciensis 2.10]
          Length = 196

 Score =  206 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V+I L+  K   LQI  ++ DG + +  C E+S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGFELVRIRLMSGKTTTLQIMADKPDGGIEVDGCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDSYALEVSSPGIDRPLTRLKDFEMFEGYEAKIETSELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGVEDDEVLINIEEHGET----ITIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGTL 178


>gi|182678036|ref|YP_001832182.1| hypothetical protein Bind_1050 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|259585728|sp|B2IIK0|RIMP_BEII9 RecName: Full=Ribosome maturation factor rimP
 gi|182633919|gb|ACB94693.1| protein of unknown function DUF150 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 314

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 6/194 (3%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
           +      + +EPR+  + G+A  ++ +  PV+ ++  R V++ +  +    +QI  ER D
Sbjct: 17  QPLSPDAALHEPRLLQESGIAARVAVLAAPVLADLGLRLVRVKISGQNGTTVQIMAERPD 76

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G M +  CE +S+A+SP+LDVE+ ++  Y LE+SSPGIDRP+VR SDF R  G  V  E+
Sbjct: 77  GTMDVEACESVSEALSPVLDVEDPVKQAYHLEISSPGIDRPLVRLSDFERALGQEVRVEL 136

Query: 122 VLSSGDKQKLIGKIMGTS------ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 +++  G I           +   L   +   K   E ++ +  D L  ARL++T
Sbjct: 137 KTGLAGRKRFRGTIGPIEASSPIGGSKGALRLTRTDAKPEEETEVLLPLDDLHEARLVLT 196

Query: 176 DELLRASLNNYGSY 189
           ++L+R +L    + 
Sbjct: 197 EDLIRQALRAAKAA 210


>gi|163737948|ref|ZP_02145364.1| hypothetical protein RGBS107_06039 [Phaeobacter gallaeciensis
           BS107]
 gi|161388564|gb|EDQ12917.1| hypothetical protein RGBS107_06039 [Phaeobacter gallaeciensis
           BS107]
          Length = 196

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V+I L+  K   LQI  ++ DG + +  C E+S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGFELVRIRLMSGKTTTLQIMADKPDGGIEVDGCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDSYALEVSSPGIDRPLTRLKDFEMFEGYEAKIETSELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGVEGDEVLINIEEHGET----ITIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGTL 178


>gi|294675769|ref|YP_003576384.1| hypothetical protein RCAP_rcc00212 [Rhodobacter capsulatus SB 1003]
 gi|294474589|gb|ADE83977.1| protein of unknown function DUF150 [Rhodobacter capsulatus SB 1003]
          Length = 199

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +    G+   ++ +I P IE + F  V+I +   ++ LLQI  +R +G + + DC  +S 
Sbjct: 4   LIAKTGIDRRLADIIGPTIEGLGFELVRIRMQGGRHPLLQIMADRPEGGIDVDDCGAIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ IE  Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G 
Sbjct: 64  AVSAVLDVEDPIEEKYTLEVSSPGIDRPLTRLKDFDVWEGYEARIETEEQIDGRKRFKGI 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT +    +E E +GE    ++ I + FD L  A+LI+TDEL+   L    +  
Sbjct: 124 LRGTEDDEVLIEIENQGE----QVTIGLKFDWLSDAKLILTDELIAEMLRQRKAAG 175


>gi|254718199|ref|ZP_05180010.1| hypothetical protein Bru83_01396 [Brucella sp. 83/13]
 gi|265983157|ref|ZP_06095892.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306837713|ref|ZP_07470582.1| Protein of unknown function DUF150 [Brucella sp. NF 2653]
 gi|306843579|ref|ZP_07476180.1| Protein of unknown function DUF150 [Brucella sp. BO1]
 gi|264661749|gb|EEZ32010.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306276270|gb|EFM57970.1| Protein of unknown function DUF150 [Brucella sp. BO1]
 gi|306407271|gb|EFM63481.1| Protein of unknown function DUF150 [Brucella sp. NF 2653]
          Length = 219

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+L+R 
Sbjct: 128 SIVHEGRKKFRGRIVVGDADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|148251678|ref|YP_001236263.1| hypothetical protein BBta_0054 [Bradyrhizobium sp. BTAi1]
 gi|166919104|sp|A5E863|RIMP_BRASB RecName: Full=Ribosome maturation factor rimP
 gi|146403851|gb|ABQ32357.1| hypothetical protein BBta_0054 [Bradyrhizobium sp. BTAi1]
          Length = 253

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 109/178 (61%), Gaps = 2/178 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  +++V +PV++ M +R V+I +  E    +Q+  ER DG M + DCE 
Sbjct: 16  EPRLVVEPGVAARVAAVAEPVLQGMGYRLVRIRISGEAGCTVQVMAERPDGTMQIEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LD+ + I+  YRLE+SSPGIDRP+VR++DF R  GH+V  E+ ++  ++++ 
Sbjct: 76  VSRALSPVLDIADPIDRAYRLEISSPGIDRPLVRRTDFERHIGHLVKIEMAVAHQNRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
            G I G    G  + ++   +    +  + +    +  A+L++TDEL+  S+    + 
Sbjct: 136 RGIITGLDGDGVCITRDDVAKD--QDPSVVLPMTDIGDAKLVLTDELIAESMRRGKAA 191


>gi|316931576|ref|YP_004106558.1| hypothetical protein Rpdx1_0181 [Rhodopseudomonas palustris DX-1]
 gi|315599290|gb|ADU41825.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           DX-1]
          Length = 259

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 106/178 (59%), Gaps = 2/178 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A    +V +PV+  M +R V+I +  E    +QI  ER DG M + DCE 
Sbjct: 16  EPRLVIEPGVAARFCAVAEPVLLAMGYRLVRIKVSGEAGCTVQIMAERPDGTMLIDDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ ++   +++ 
Sbjct: 76  VSRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFARYAGHLVKVEMAVAHQGRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
            G + G       +++++       +  + ++   +  ARL++TDEL+  S+      
Sbjct: 136 RGLLDGVEGDAVRIQRDEA--PKGEDPLVLLAMHDIGDARLVLTDELVAESMRRGKQA 191


>gi|298293855|ref|YP_003695794.1| hypothetical protein Snov_3905 [Starkeya novella DSM 506]
 gi|296930366|gb|ADH91175.1| protein of unknown function DUF150 [Starkeya novella DSM 506]
          Length = 270

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 99/178 (55%), Gaps = 2/178 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G A  ++ ++ PV+E + FR V++ +       LQI  ER DG+  + +CE
Sbjct: 25  DEPRLVTESGPAARVAGIVGPVLEGLGFRLVRVRISGGSPPTLQIMAERPDGSFGIDECE 84

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
             S+AISP+LDVE+ I G Y LE+SSPGIDRP+ R SDF RW GH V  E+ +    +++
Sbjct: 85  AASRAISPVLDVEDPISGAYNLEMSSPGIDRPLARLSDFERWAGHDVKVEMAVPVDGRKR 144

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
             G ++G       +          +   +A+    +  ARL++TD L+R +L    +
Sbjct: 145 FRGILVGAQREEALVRLPDAPADKPD--TVALPISDIGEARLVMTDALIREALRRDKA 200


>gi|17988251|ref|NP_540885.1| hypothetical protein BMEI1968 [Brucella melitensis bv. 1 str. 16M]
 gi|23503010|ref|NP_699137.1| hypothetical protein BR2162 [Brucella suis 1330]
 gi|148560565|ref|YP_001259956.1| hypothetical protein BOV_2074 [Brucella ovis ATCC 25840]
 gi|161620070|ref|YP_001593957.1| hypothetical protein BCAN_A2204 [Brucella canis ATCC 23365]
 gi|163844175|ref|YP_001628580.1| hypothetical protein BSUIS_A1999 [Brucella suis ATCC 23445]
 gi|225853587|ref|YP_002733820.1| hypothetical protein BMEA_A2222 [Brucella melitensis ATCC 23457]
 gi|254690293|ref|ZP_05153547.1| hypothetical protein Babob68_08992 [Brucella abortus bv. 6 str.
           870]
 gi|254694781|ref|ZP_05156609.1| hypothetical protein Babob3T_08988 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254700791|ref|ZP_05162619.1| hypothetical protein Bsuib55_08022 [Brucella suis bv. 5 str. 513]
 gi|254705160|ref|ZP_05166988.1| hypothetical protein Bsuib36_14811 [Brucella suis bv. 3 str. 686]
 gi|254709136|ref|ZP_05170947.1| hypothetical protein BpinB_02482 [Brucella pinnipedialis B2/94]
 gi|254713439|ref|ZP_05175250.1| hypothetical protein BcetM6_08809 [Brucella ceti M644/93/1]
 gi|254716205|ref|ZP_05178016.1| hypothetical protein BcetM_07186 [Brucella ceti M13/05/1]
 gi|256030661|ref|ZP_05444275.1| hypothetical protein BpinM2_08407 [Brucella pinnipedialis
           M292/94/1]
 gi|256045765|ref|ZP_05448643.1| hypothetical protein Bmelb1R_14765 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112484|ref|ZP_05453405.1| hypothetical protein Bmelb3E_07358 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256158663|ref|ZP_05456546.1| hypothetical protein BcetM4_07321 [Brucella ceti M490/95/1]
 gi|256254067|ref|ZP_05459603.1| hypothetical protein BcetB_07163 [Brucella ceti B1/94]
 gi|256258546|ref|ZP_05464082.1| hypothetical protein Babob9C_14597 [Brucella abortus bv. 9 str.
           C68]
 gi|256262929|ref|ZP_05465461.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|256370557|ref|YP_003108068.1| hypothetical protein BMI_I2183 [Brucella microti CCM 4915]
 gi|260563061|ref|ZP_05833547.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260567371|ref|ZP_05837841.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260755833|ref|ZP_05868181.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260884858|ref|ZP_05896472.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261215108|ref|ZP_05929389.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261217979|ref|ZP_05932260.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261221208|ref|ZP_05935489.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261316636|ref|ZP_05955833.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261321171|ref|ZP_05960368.1| hypothetical protein BAIG_01745 [Brucella ceti M644/93/1]
 gi|261751300|ref|ZP_05995009.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261755865|ref|ZP_05999574.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|265987708|ref|ZP_06100265.1| hypothetical protein BALG_00285 [Brucella pinnipedialis M292/94/1]
 gi|265992182|ref|ZP_06104739.1| hypothetical protein BAMG_02674 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993920|ref|ZP_06106477.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265997169|ref|ZP_06109726.1| hypothetical protein BAPG_00290 [Brucella ceti M490/95/1]
 gi|294851386|ref|ZP_06792059.1| hypothetical protein BAZG_00287 [Brucella sp. NVSL 07-0026]
 gi|297247385|ref|ZP_06931103.1| hypothetical protein BAYG_00286 [Brucella abortus bv. 5 str. B3196]
 gi|54040492|sp|P67213|RIMP_BRUSU RecName: Full=Ribosome maturation factor rimP
 gi|54042664|sp|P67212|RIMP_BRUME RecName: Full=Ribosome maturation factor rimP
 gi|166980272|sp|A5VTA9|RIMP_BRUO2 RecName: Full=Ribosome maturation factor rimP
 gi|189039426|sp|B0CK08|RIMP_BRUSI RecName: Full=Ribosome maturation factor rimP
 gi|189039778|sp|A9M9Z1|RIMP_BRUC2 RecName: Full=Ribosome maturation factor rimP
 gi|254801690|sp|C0RG44|RIMP_BRUMB RecName: Full=Ribosome maturation factor rimP
 gi|17984019|gb|AAL53149.1| protein associated with nus operon [Brucella melitensis bv. 1 str.
           16M]
 gi|23349050|gb|AAN31052.1| conserved hypothetical protein [Brucella suis 1330]
 gi|148371822|gb|ABQ61801.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
 gi|161336881|gb|ABX63186.1| hypothetical protein BCAN_A2204 [Brucella canis ATCC 23365]
 gi|163674898|gb|ABY39009.1| Hypothetical protein BSUIS_A1999 [Brucella suis ATCC 23445]
 gi|225641952|gb|ACO01866.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|256000720|gb|ACU49119.1| hypothetical protein BMI_I2183 [Brucella microti CCM 4915]
 gi|260153077|gb|EEW88169.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260156889|gb|EEW91969.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260675941|gb|EEX62762.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260874386|gb|EEX81455.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260916715|gb|EEX83576.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260919792|gb|EEX86445.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260923068|gb|EEX89636.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261293861|gb|EEX97357.1| hypothetical protein BAIG_01745 [Brucella ceti M644/93/1]
 gi|261295859|gb|EEX99355.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261741053|gb|EEY28979.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261745618|gb|EEY33544.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262551637|gb|EEZ07627.1| hypothetical protein BAPG_00290 [Brucella ceti M490/95/1]
 gi|262764901|gb|EEZ10822.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003248|gb|EEZ15541.1| hypothetical protein BAMG_02674 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263092803|gb|EEZ16978.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264659905|gb|EEZ30166.1| hypothetical protein BALG_00285 [Brucella pinnipedialis M292/94/1]
 gi|294819975|gb|EFG36974.1| hypothetical protein BAZG_00287 [Brucella sp. NVSL 07-0026]
 gi|297174554|gb|EFH33901.1| hypothetical protein BAYG_00286 [Brucella abortus bv. 5 str. B3196]
 gi|326410160|gb|ADZ67225.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326539878|gb|ADZ88093.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 219

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+L+R 
Sbjct: 128 SIVHEGRKKFRGRIVVGEADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|119385318|ref|YP_916374.1| hypothetical protein Pden_2591 [Paracoccus denitrificans PD1222]
 gi|259586172|sp|A1B584|RIMP_PARDP RecName: Full=Ribosome maturation factor rimP
 gi|119375085|gb|ABL70678.1| protein of unknown function DUF150 [Paracoccus denitrificans
           PD1222]
          Length = 206

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 8/180 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V+I L   K   LQI  +R +G + + DC ++S 
Sbjct: 4   LIAKTAIDRRLAEIISPVIEDLGFELVRIRLQGGKTATLQIMADRPEGGINVDDCADIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S ILDVE+ +E  Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 64  AVSAILDVEDPLEDAYHLEVSSPGIDRPLTRLKDFETFEGYEARLETNQPIDGRKRFKGV 123

Query: 135 IMGTS----ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G           L  E+ GE       I ++FD L  A+L++TDEL+   L       
Sbjct: 124 LAGVEKGEGGDEVLLNIEEGGET----QTIGLNFDWLSDAKLVLTDELIAEMLRQKKDAG 179


>gi|153008086|ref|YP_001369301.1| hypothetical protein Oant_0750 [Ochrobactrum anthropi ATCC 49188]
 gi|167016790|sp|A6WWW8|RIMP_OCHA4 RecName: Full=Ribosome maturation factor rimP
 gi|151559974|gb|ABS13472.1| protein of unknown function DUF150 [Ochrobactrum anthropi ATCC
           49188]
          Length = 224

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
                L +  + RI  + G+   ++S+I+PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NEAETLAAGADERIIRETGIDAKVASIIEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFADWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      +E  + I FD +  ARL++TD+L+R 
Sbjct: 128 SVVHEGRKKFRGRIVLGDAESVVIESDQISY--GSEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|86747723|ref|YP_484219.1| hypothetical protein RPB_0597 [Rhodopseudomonas palustris HaA2]
 gi|123408929|sp|Q2J2K2|RIMP_RHOP2 RecName: Full=Ribosome maturation factor rimP
 gi|86570751|gb|ABD05308.1| Protein of unknown function DUF150 [Rhodopseudomonas palustris
           HaA2]
          Length = 259

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A    +V +PV+  M +R V+I +  E    +QI  ER DG M + DCE
Sbjct: 15  DEPRLVVEPGVAARFGAVAEPVLLAMGYRLVRIKVSAEAGCTVQIMAERPDGTMLIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDV + IE  YRLE+SSPGIDRP+VR+SDF R++GH+V  E+ +    +++
Sbjct: 75  AVSKALSPVLDVTDPIEKAYRLEISSPGIDRPLVRRSDFARYSGHLVKIEMAVPHQGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
             G + G       +++E   ++D     + +    +  ARL++TDEL+  S+      
Sbjct: 135 YRGLLDGVEGDAIRIQREGVKDED---PLVLLPMHDIGDARLVLTDELIAESMRRGKQA 190


>gi|146278787|ref|YP_001168946.1| hypothetical protein Rsph17025_2754 [Rhodobacter sphaeroides ATCC
           17025]
 gi|166988606|sp|A4WW77|RIMP_RHOS5 RecName: Full=Ribosome maturation factor rimP
 gi|145557028|gb|ABP71641.1| protein of unknown function DUF150 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 204

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 3/178 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C ++S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECADIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAVLDVEDPIEDNYTLEVSSPGIDRPLTRLKDFDAWAGYEARIETAELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT      +  E   E     + I + FD L  A+LI+TDEL+   L    +    
Sbjct: 124 LAGTEGDEVLITIEDGKE---GFVTIGLKFDWLSDAKLILTDELIAEMLRQKKASGNF 178


>gi|222147146|ref|YP_002548103.1| hypothetical protein Avi_0164 [Agrobacterium vitis S4]
 gi|259585691|sp|B9JYK3|RIMP_AGRVS RecName: Full=Ribosome maturation factor rimP
 gi|221734136|gb|ACM35099.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 204

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 80/184 (43%), Positives = 116/184 (63%), Gaps = 2/184 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M          EPR+  + GL   I+ +I+PVI E+ F  V++ +L +  + LQI  ER 
Sbjct: 1   MSEHVPADEAPEPRLITETGLDRRIADIIEPVIVELGFELVRVRILNQNGMTLQIMAERK 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCEELS AISP+LDVE+ ++  Y LEVSSPGIDRPMVR SDF RW G+++ CE
Sbjct: 61  DGTMTVEDCEELSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRASDFTRWQGNLLKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +   ++++  GKI   +  GF LE+++       E ++ I F +L  A+LI+TD+L+R
Sbjct: 121 TSILIDNRKRFRGKIADVTPDGFILERDQVAY--GEEPRLTIPFTALAEAKLILTDDLVR 178

Query: 181 ASLN 184
            +L 
Sbjct: 179 DALR 182


>gi|62290999|ref|YP_222792.1| hypothetical protein BruAb1_2135 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700908|ref|YP_415482.1| hypothetical protein BAB1_2162 [Brucella melitensis biovar Abortus
           2308]
 gi|189025211|ref|YP_001935979.1| hypothetical protein BAbS19_I20230 [Brucella abortus S19]
 gi|237816501|ref|ZP_04595494.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|254696409|ref|ZP_05158237.1| hypothetical protein Babob28_01503 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731322|ref|ZP_05189900.1| hypothetical protein Babob42_09020 [Brucella abortus bv. 4 str.
           292]
 gi|260546262|ref|ZP_05822002.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260759056|ref|ZP_05871404.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260760781|ref|ZP_05873124.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|75496020|sp|Q57AA3|RIMP_BRUAB RecName: Full=Ribosome maturation factor rimP
 gi|91208402|sp|Q2YQS0|RIMP_BRUA2 RecName: Full=Ribosome maturation factor rimP
 gi|259585733|sp|B2S9F3|RIMP_BRUA1 RecName: Full=Ribosome maturation factor rimP
 gi|62197131|gb|AAX75431.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82617009|emb|CAJ12118.1| Domain of unknown function DUF150 [Brucella melitensis biovar
           Abortus 2308]
 gi|189020783|gb|ACD73505.1| Domain of unknown function DUF150 [Brucella abortus S19]
 gi|237788568|gb|EEP62783.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260096369|gb|EEW80245.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260669374|gb|EEX56314.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260671213|gb|EEX58034.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 219

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+L+R 
Sbjct: 128 SIVHEGRKKFRGRIVVGEADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|77464743|ref|YP_354247.1| hypothetical protein RSP_1162 [Rhodobacter sphaeroides 2.4.1]
 gi|91208409|sp|Q3IYN8|RIMP_RHOS4 RecName: Full=Ribosome maturation factor rimP
 gi|77389161|gb|ABA80346.1| hypothetical protein RSP_1162 [Rhodobacter sphaeroides 2.4.1]
          Length = 204

 Score =  204 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 3/178 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAALDVEDPIEENYTLEVSSPGIDRPLTRLKDFEVWTGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT      +  E       + + I + FD L  A+LI+T+EL+   L    +    
Sbjct: 124 LAGTEGDEVLITIEDG---RDSYVTIGLKFDWLADAKLILTEELIAEMLRQKKASGNF 178


>gi|110636251|ref|YP_676459.1| hypothetical protein Meso_3927 [Mesorhizobium sp. BNC1]
 gi|123352956|sp|Q11BD1|RIMP_MESSB RecName: Full=Ribosome maturation factor rimP
 gi|110287235|gb|ABG65294.1| protein of unknown function DUF150 [Chelativorans sp. BNC1]
          Length = 220

 Score =  204 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 66/176 (37%), Positives = 109/176 (61%), Gaps = 2/176 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           + RI  + G A  +++++ PV++ + +R V++ L  +  L LQI  ER DG MT+ DCEE
Sbjct: 3   DDRIIRETGAAARVAAIVMPVLDALGYRLVRVRLSAQDGLTLQIMAERPDGTMTVDDCEE 62

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP LDVE+ I+  Y+LE+SSPGIDRP+VR SDF    GH+   E  +    +++ 
Sbjct: 63  VSRAVSPALDVEDPIDSAYQLEISSPGIDRPLVRLSDFQAALGHLAKVETSVMVDGRKRF 122

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
            G+I+G +     +E++K  E +    +  I  D++  A+L++TD L+R +L    
Sbjct: 123 RGQIVGCTGETLTIERDKVAEGEAPLAE--IPLDAISDAKLVLTDALIREALKKDK 176


>gi|126738453|ref|ZP_01754158.1| hypothetical protein RSK20926_08312 [Roseobacter sp. SK209-2-6]
 gi|126720252|gb|EBA16958.1| hypothetical protein RSK20926_08312 [Roseobacter sp. SK209-2-6]
          Length = 197

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ F  V+I L+  K   LQI  ++ +G + + DC E+S 
Sbjct: 5   LIAKAAIDRRLAEILIPVIEDLGFELVRIRLMSGKTTTLQIMADKPEGGIEVDDCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E     G +++  G+
Sbjct: 65  AVSATLDVEDPILDAYSLEVSSPGIDRPLTRMKDFDMFEGYEAKLETEELVGGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT E    +  E +GE     + I + FD L  A+L++TDEL++  L    +   L
Sbjct: 125 LAGTEEDEVLINIEDQGET----VTIGLKFDWLTDAKLVLTDELIKEMLRQRKAAGTL 178


>gi|256060122|ref|ZP_05450304.1| hypothetical protein Bneo5_07156 [Brucella neotomae 5K33]
 gi|261324099|ref|ZP_05963296.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261300079|gb|EEY03576.1| conserved hypothetical protein [Brucella neotomae 5K33]
          Length = 219

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHITKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+L+R 
Sbjct: 128 SIVHEGRKKFRGRIVVGEADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|225626527|ref|ZP_03784566.1| Protein of unknown function DUF150 [Brucella ceti str. Cudo]
 gi|260169565|ref|ZP_05756376.1| hypothetical protein BruF5_14639 [Brucella sp. F5/99]
 gi|261759093|ref|ZP_06002802.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|225618184|gb|EEH15227.1| Protein of unknown function DUF150 [Brucella ceti str. Cudo]
 gi|261739077|gb|EEY27073.1| conserved hypothetical protein [Brucella sp. F5/99]
          Length = 219

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+ +R 
Sbjct: 128 SIVHEGRKKFRGRIVVGEADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDFIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|126463583|ref|YP_001044697.1| hypothetical protein Rsph17029_2823 [Rhodobacter sphaeroides ATCC
           17029]
 gi|166988525|sp|A3PNK9|RIMP_RHOS1 RecName: Full=Ribosome maturation factor rimP
 gi|126105247|gb|ABN77925.1| protein of unknown function DUF150 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 204

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 3/178 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAALDVEDPIEENYTLEVSSPGIDRPLTRLKDFDVWTGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT      +  E       + + I + FD L  A+LI+T+EL+   L    +    
Sbjct: 124 LAGTEGDEVLITIEDG---RDSYVTIGLKFDWLADAKLILTEELIAEMLRQKKASGNF 178


>gi|239833210|ref|ZP_04681539.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239825477|gb|EEQ97045.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 240

 Score =  203 bits (518), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 66/181 (36%), Positives = 106/181 (58%), Gaps = 2/181 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
            +  + RI  + G+   ++ +++PV+  + FR V++ L       LQI  ER DG MT+ 
Sbjct: 30  AAGADERIIRETGIDAKVAGIVEPVLNTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVD 89

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    
Sbjct: 90  DCELVSRTVAPVLDVEDPINGKYHLEISSPGIDRPLVRKSDFADWAGHIAKVETSIVHEG 149

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           ++K  G+I+        +E ++      +E  + I FD +  ARL++TD+L+R +L    
Sbjct: 150 RKKFRGRIVLGDAESVVIESDQISY--GSEPVVRIPFDLISDARLVLTDDLIRDALRKDK 207

Query: 188 S 188
           +
Sbjct: 208 A 208


>gi|221640657|ref|YP_002526919.1| hypothetical protein RSKD131_2558 [Rhodobacter sphaeroides KD131]
 gi|254765045|sp|B9KPN3|RIMP_RHOSK RecName: Full=Ribosome maturation factor rimP
 gi|221161438|gb|ACM02418.1| Hypothetical Protein RSKD131_2558 [Rhodobacter sphaeroides KD131]
          Length = 204

 Score =  203 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 3/178 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAALDVEDPIEENYTLEVSSPGIDRPLTRLKDFDVWTGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT      +  E         + I + FD L  A+LI+T+EL+   L    +    
Sbjct: 124 LAGTEGDEVLITIEDG---RDGYVTIGLKFDWLADAKLILTEELIAEMLRQKKASGNF 178


>gi|126724628|ref|ZP_01740471.1| hypothetical protein RB2150_12371 [Rhodobacterales bacterium
           HTCC2150]
 gi|126705792|gb|EBA04882.1| hypothetical protein RB2150_12371 [Rhodobacterales bacterium
           HTCC2150]
          Length = 228

 Score =  203 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   +++++ PVIE++    V++ L+  K  +LQI VE+ +G + + DC ++S 
Sbjct: 42  LIAKAAIDQRMANIVTPVIEDLGCELVRVRLMTGKENILQIMVEKPEGGIEVDDCAKVST 101

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  W+G+    E       +++  G+
Sbjct: 102 AVSATLDVEDPILDAYNLEVSSPGIDRPLTRLKDFDMWDGYEAKIETSELIDGRRRFKGQ 161

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT +    +  E        E  I + F+ L  A+L++TDEL+R  L +      +
Sbjct: 162 LAGTQDDEVLITIE--------EGTIGLKFEWLSDAKLVLTDELIRDVLRSRKDAGEI 211


>gi|90420534|ref|ZP_01228441.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335262|gb|EAS49015.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 232

 Score =  203 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 65/166 (39%), Positives = 104/166 (62%), Gaps = 2/166 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           RI  + GL G ++ +++P IE++ +R V++       + LQI  ER DG MT+ DCE +S
Sbjct: 37  RIVKEQGLEGRVAEIVEPAIEQIGYRLVRVRTSGLNGMTLQIMAERPDGTMTVEDCEAVS 96

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+SP+LDV++ I+  Y LEVSSPGIDRP+VRK DF  W G ++  E      ++++  G
Sbjct: 97  RAVSPVLDVDDPIDKAYHLEVSSPGIDRPLVRKGDFETWAGFLMKLETNRLINERKRYRG 156

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           KI+   +    +E+++  E       + I FD++  ARLI+TD+L+
Sbjct: 157 KIVAVGDEAITVERDQPAE--GEPGAVEIPFDAIGEARLILTDDLI 200


>gi|332559636|ref|ZP_08413958.1| ribosome maturation protein RimP [Rhodobacter sphaeroides WS8N]
 gi|332277348|gb|EGJ22663.1| ribosome maturation protein RimP [Rhodobacter sphaeroides WS8N]
          Length = 204

 Score =  203 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 3/178 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAALDVEDPIEENYTLEVSSPGIDRPLTRLKDFDVWTGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT      +  E       + + I + FD L  A+LI+T+EL+   L    +    
Sbjct: 124 LAGTEGDEVLITIEDG---RDSYVTIGLKFDWLSDAKLILTEELIAEMLRQKKASGNF 178


>gi|188582067|ref|YP_001925512.1| hypothetical protein Mpop_2822 [Methylobacterium populi BJ001]
 gi|259585787|sp|B1ZDR1|RIMP_METPB RecName: Full=Ribosome maturation factor rimP
 gi|179345565|gb|ACB80977.1| protein of unknown function DUF150 [Methylobacterium populi BJ001]
          Length = 255

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 62/184 (33%), Positives = 101/184 (54%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGCTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ + G Y LE+SSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECETVSRAISPILDLEDPVGGAYYLEISSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
            +++  G +   S  G  +  +    K     +I +    L  A L++TD+L+R SL   
Sbjct: 121 GRKRFRGILGVPSADGATVPIDLPDVKPGLPSRIDLPLRDLGEAHLVLTDDLIRESLRRG 180

Query: 187 GSYA 190
            +  
Sbjct: 181 SAPP 184


>gi|85705697|ref|ZP_01036794.1| hypothetical protein ROS217_10367 [Roseovarius sp. 217]
 gi|85669687|gb|EAQ24551.1| hypothetical protein ROS217_10367 [Roseovarius sp. 217]
          Length = 191

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ +  V++ L+  +   LQI  ++ DG + + DC  +S 
Sbjct: 5   LIAKAAIDRRMAEIITPVIEDLGYELVRVRLMGGQYHTLQIMADKPDGGIEVDDCAVIST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  AVSAVLDVEDPLVEAYTLEVSSPGIDRPLTRLKDFEAFEGYEAKIETTELIDGRRRFKGV 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G   T   +  E        E  I + FD L  A+L++TDEL++  L    +  
Sbjct: 125 LAGVEGTEVLINVE--------EGTIGLEFDWLSDAKLVLTDELIKEMLRQRKAAG 172


>gi|149202948|ref|ZP_01879919.1| hypothetical protein RTM1035_19436 [Roseovarius sp. TM1035]
 gi|149143494|gb|EDM31530.1| hypothetical protein RTM1035_19436 [Roseovarius sp. TM1035]
          Length = 191

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ +  V++ L+  +   LQI  ++ +G + + DC  +S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGYELVRVRLMGGQYHTLQIMADKPEGGIEVDDCAAIST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  AVSAVLDVEDPLVEAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETTELIDGRRRFKGV 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G   +   +  E        E  I + FD L  A+L++TDEL++  L    +  
Sbjct: 125 LAGVEGSEVLINVE--------EGTIGLEFDWLSDAKLVLTDELIKEMLRQRKAAG 172


>gi|89052532|ref|YP_507983.1| hypothetical protein Jann_0041 [Jannaschia sp. CCS1]
 gi|122499897|sp|Q28WF4|RIMP_JANSC RecName: Full=Ribosome maturation factor rimP
 gi|88862081|gb|ABD52958.1| protein of unknown function DUF150 [Jannaschia sp. CCS1]
          Length = 194

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ P IE + F  V+I ++  K   LQI  ER DG + + +C ++S 
Sbjct: 4   LIAKTSMDRRMAEIVTPSIEALGFEVVRIRVMGGKTNTLQIMAERPDGGIDVDECAQISN 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS +LDVE+ +E  Y LEVSSPGIDRP+ R  DF  + G+    E     G +++  G 
Sbjct: 64  AISVLLDVEDPLEDAYALEVSSPGIDRPLTRLKDFETFEGYEAKLETTEMIGGQRRFKGV 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G  +    +  E+  E     + + ++FD L  A+L++TDEL++  L       
Sbjct: 124 LAGVEDDEVLVNLEQGSET----VTVGLNFDWLSDAKLVLTDELIKEMLKQRKDAG 175


>gi|159046100|ref|YP_001534894.1| hypothetical protein Dshi_3560 [Dinoroseobacter shibae DFL 12]
 gi|189040162|sp|A8LQ53|RIMP_DINSH RecName: Full=Ribosome maturation factor rimP
 gi|157913860|gb|ABV95293.1| protein of unknown function DUF150 [Dinoroseobacter shibae DFL 12]
          Length = 196

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     L   I++++ PVIE++ +  V++ ++  K+  LQI  E+ +G + + DC  +S 
Sbjct: 4   LIAKTTLDQRIAALVTPVIEDLGYELVRLRVMSGKSPTLQIMAEKPEGGIEVDDCARIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G 
Sbjct: 64  EVSATLDVEDPIEDNYTLEVSSPGIDRPLTRLKDFDTWVGYEAKIETTELIEGRRRFKGA 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +E E        E  I + F+ L  A+L++TD+L+R  L       
Sbjct: 124 LAGTEGDEVLIEIE--------EGTIGLKFEWLSDAKLVLTDDLIRDVLKGRKDAG 171


>gi|312115895|ref|YP_004013491.1| hypothetical protein Rvan_3197 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221024|gb|ADP72392.1| protein of unknown function DUF150 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 221

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 100/177 (56%), Gaps = 2/177 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           R   + G A D++++I+PV+E+M FR V++++ +     +QI  ++ DG + + DC ++S
Sbjct: 21  RFTREFGAAADLAALIEPVLEDMGFRLVRVTMSKRDGATIQIMADKADGAINVDDCAQIS 80

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ISP+LD  + I+  Y LEVSSPGIDR +VR SDF  W G     E+      +++  G
Sbjct: 81  RRISPLLDAHDPIKDRYYLEVSSPGIDRILVRPSDFEDWAGFETKVELKELIDGRKRFRG 140

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
            + G       L+   + ++      I +  D +  A+L++TDEL+RASL    +  
Sbjct: 141 ILEGYENGEMLLQV--QLDEKGEPQTIGLPVDLIHDAKLVLTDELIRASLAKAKAAG 195


>gi|319403632|emb|CBI77217.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 225

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 81/188 (43%), Positives = 119/188 (63%), Gaps = 2/188 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M     +    EPR+F + G+A  +S++I P+++ + FR V+  LL    L LQI VER 
Sbjct: 18  MNEIERMGDIDEPRLFEEDGVAARVSALIIPLLKPLGFRLVRTKLLGLNGLTLQIMVERT 77

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G MT+ DCE +S+A++P+LD+EN+IE  Y LE+SSPGIDR +VRKSDF+ W GH+   E
Sbjct: 78  NGTMTIEDCEIVSRAVAPLLDIENVIERKYHLEISSPGIDRLLVRKSDFVHWQGHLAKIE 137

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  +QKL GK+   ++ GF L  EK   ++  E+ I ISF ++ +A LI+TDEL+R
Sbjct: 138 TNTVIDGRQKLRGKLKDITQNGFTLNIEKTAHRE--EINIFISFSNITNAHLILTDELIR 195

Query: 181 ASLNNYGS 188
            +L     
Sbjct: 196 DTLKKNKD 203


>gi|307942743|ref|ZP_07658088.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
 gi|307773539|gb|EFO32755.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
          Length = 200

 Score =  201 bits (511), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 70/173 (40%), Positives = 109/173 (63%), Gaps = 6/173 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S++E RI  + GL   ++++++PVIE++ FR V+  +       LQI  ER DG MT+ D
Sbjct: 2   SEHEARIVTEQGLDARVAAIVEPVIEDLGFRLVRSKISAANGCTLQIMAERPDGTMTVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP LDV++ I   Y LEVSSPGIDRP+VR+SDF+RW+GH V  E+ +    +
Sbjct: 62  CETVSRAVSPALDVDDPISRAYHLEVSSPGIDRPLVRESDFVRWSGHEVKIEMSVLQEGR 121

Query: 129 QKLIGKIMGTS--ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           ++  G ++G    ET   L   K GE D     +++    +  A+L++TD+L+
Sbjct: 122 KRFRGTLLGAENGETQIKLPDTKSGEVDA----VSLPIGDIGEAKLVLTDDLI 170


>gi|90422001|ref|YP_530371.1| hypothetical protein RPC_0477 [Rhodopseudomonas palustris BisB18]
 gi|90104015|gb|ABD86052.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           BisB18]
          Length = 272

 Score =  200 bits (510), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 65/176 (36%), Positives = 106/176 (60%), Gaps = 2/176 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + GL   +++V  PV++ M +R V+I +  E    +QI  ER DG M + DCE 
Sbjct: 26  EPRLVVEPGLGARVAAVAGPVLQGMGYRLVRIKVSGELGCTVQIMAERPDGTMLVEDCEA 85

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S A+SP+LD+ + +E  YRLE+SSPGIDRP+VR+SDF R+ G++V  E+ ++ G +++ 
Sbjct: 86  ISHALSPVLDIADPVERAYRLEISSPGIDRPLVRRSDFERYEGYLVKIEMAVAVGGRKRF 145

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
            G +         L +E  G +D  +    +  + + SA L++TDEL+  S+    
Sbjct: 146 RGLLGPLQGDAVLLARE--GARDGEDPNSLLPLEDIASANLVLTDELIAESMRRGK 199


>gi|259586221|sp|Q21C34|RIMP_RHOPB RecName: Full=Ribosome maturation factor rimP
          Length = 262

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 65/176 (36%), Positives = 106/176 (60%), Gaps = 2/176 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + GL   +++V  PV++ M +R V+I +  E    +QI  ER DG M + DCE 
Sbjct: 16  EPRLVVEPGLGARVAAVAGPVLQGMGYRLVRIKVSGELGCTVQIMAERPDGTMLVEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S A+SP+LD+ + +E  YRLE+SSPGIDRP+VR+SDF R+ G++V  E+ ++ G +++ 
Sbjct: 76  ISHALSPVLDIADPVERAYRLEISSPGIDRPLVRRSDFERYEGYLVKIEMAVAVGGRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
            G +         L +E  G +D  +    +  + + SA L++TDEL+  S+    
Sbjct: 136 RGLLGPLQGDAVLLARE--GARDGEDPNSLLPLEDIASANLVLTDELIAESMRRGK 189


>gi|323136837|ref|ZP_08071918.1| protein of unknown function DUF150 [Methylocystis sp. ATCC 49242]
 gi|322398154|gb|EFY00675.1| protein of unknown function DUF150 [Methylocystis sp. ATCC 49242]
          Length = 255

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  ++ + +PV+ ++ FR V++ LL++    LQI  ER DG MT+ DCE
Sbjct: 14  DEPRLVSETGVAARVAHLAEPVLAQLGFRLVRVRLLQQNGQTLQIMAERPDGTMTIDDCE 73

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQ 129
             SQA+SP LDV ++I   YRLE+SSPG+DRP+VR SDF R  GH    E+       ++
Sbjct: 74  AASQALSPELDVADVIANEYRLEISSPGVDRPLVRVSDFARAVGHEARIELTHPVESGRK 133

Query: 130 KLIGKIMGTSETG--FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +  G I      G    L  E+   +   E  + +    L   +L++T+ L+R SL    
Sbjct: 134 RFRGVIQAVEGEGRNAKLTLERLDARSDEEKTVVLPLADLDEGKLMLTEALIRESLRAGK 193


>gi|84500728|ref|ZP_00998977.1| hypothetical protein OB2597_12236 [Oceanicola batsensis HTCC2597]
 gi|84391681|gb|EAQ04013.1| hypothetical protein OB2597_12236 [Oceanicola batsensis HTCC2597]
          Length = 189

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE+M F  V++ L+  +   LQI  ER  G + + +C E+S 
Sbjct: 3   LIAKTAIDRRLAEIVTPVIEDMGFELVRLRLMGGQTKTLQIMAERPGGGIEVDECAEISN 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 63  AVSATLDVEDPVSDAYTLEVSSPGIDRPLTRLKDFDTFQGYEAKIETTELIDGRKRFKGV 122

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E        E  + + FD L  A+L++TDEL++  L        L
Sbjct: 123 LAGVEGGEILINIE--------EGTVGLHFDWLADAKLVLTDELIKEMLKARKDAGQL 172


>gi|163745073|ref|ZP_02152433.1| hypothetical protein OIHEL45_05780 [Oceanibulbus indolifex HEL-45]
 gi|161381891|gb|EDQ06300.1| hypothetical protein OIHEL45_05780 [Oceanibulbus indolifex HEL-45]
          Length = 192

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K+ +LQ+  +R DG + + +C ++SQ
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDMGFELVRVRLMSGKSTILQVMADRPDGGIEVDECAKISQ 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AI  +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AIGAVLDVEDPILDEYALEVSSPGIDRPLTRLKDFDAFEGYEAKIETTELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E        E  I + FD L  A+L++TD+L++  L    +   +
Sbjct: 125 LAGVEGGEVLINVE--------EGTIGLQFDWLSDAKLLLTDDLIKEMLRQRKASGAI 174


>gi|154254056|ref|YP_001414880.1| hypothetical protein Plav_3625 [Parvibaculum lavamentivorans DS-1]
 gi|259586173|sp|A7HZ90|RIMP_PARL1 RecName: Full=Ribosome maturation factor rimP
 gi|154158006|gb|ABS65223.1| protein of unknown function DUF150 [Parvibaculum lavamentivorans
           DS-1]
          Length = 207

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 2/180 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           +  +  +    G+A  +   ++   E   F  V++    +    LQI  ER DG+MT+ D
Sbjct: 18  AALDTHLIAPPGVARRVFEQLRAPAEGAGFEIVRVRFGVQDGQTLQIMAERPDGSMTVED 77

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           C ELS+ +S +LDVE+ I G Y LE+SS GIDRP+ R  DF RW+G  V   +      +
Sbjct: 78  CAELSRMLSALLDVEDPIPGEYHLEISSAGIDRPLTRPKDFERWSGFEVKVGLSEPLSGR 137

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  G + G  +    +E +  G  +     + + F  L  A+L+++D+L+R SL   G 
Sbjct: 138 KRFRGILQGVEDDEVLVECDIEGFSE--PQVLGLPFRQLSEAKLVMSDDLIRESLKRQGP 195


>gi|254462851|ref|ZP_05076267.1| hypothetical protein RB2083_3442 [Rhodobacterales bacterium
           HTCC2083]
 gi|206679440|gb|EDZ43927.1| hypothetical protein RB2083_3442 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 193

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V++ L+  K   LQI  ER  G + +  C E+S 
Sbjct: 5   LIAKAAIDQRLAGIITPVIEDLGFELVRVRLMSGKTTTLQIMAERPTGGIEVDQCAEIST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AI   LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AIGATLDVEDPIIDEYTLEVSSPGIDRPLTRLKDFATFEGYEAKIETTELIDGRRRFKGQ 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E        E  + ++FD L  A+L++TDEL+   L    +   +
Sbjct: 125 LAGVEGNDVLINIE--------EGTVGLNFDWLSDAKLVLTDELITEMLRQRKAAGDI 174


>gi|260429224|ref|ZP_05783201.1| hypothetical protein CSE45_3569 [Citreicella sp. SE45]
 gi|260419847|gb|EEX13100.1| hypothetical protein CSE45_3569 [Citreicella sp. SE45]
          Length = 198

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE+M F  V+I L+  K   LQI  ER +G + + +C ++S 
Sbjct: 4   LIAKSAIDRRLAEIVAPVIEDMGFELVRIRLMGGKTATLQIMAERPEGGIEIDECGDIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEV SPGIDRP+ R  DF  + G+    +       +++  G 
Sbjct: 64  AVSAVLDVEDPILDSYVLEVGSPGIDRPLTRLKDFETFEGYDAKIQTDELIDGRKRWQGV 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G       L  E+ GE       I + FD L  A+LI+TDEL+R  L    +  
Sbjct: 124 LAGVEGGEVLLNIEENGET----QTIGLQFDWLSDAKLILTDELMREMLRARKARG 175


>gi|75674220|ref|YP_316641.1| hypothetical protein Nwi_0021 [Nitrobacter winogradskyi Nb-255]
 gi|91207993|sp|Q3SWQ2|RIMP_NITWN RecName: Full=Ribosome maturation factor rimP
 gi|74419090|gb|ABA03289.1| Protein of unknown function DUF150 [Nitrobacter winogradskyi
           Nb-255]
          Length = 260

 Score =  197 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 62/177 (35%), Positives = 110/177 (62%), Gaps = 1/177 (0%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  ++++  PV++ M +R V+I +  E    +QI  ER DG++ + DCE
Sbjct: 15  DEPRLVVEPGVAARVAAIAAPVLQGMGYRLVRIKVSGEAGCTVQIMAERPDGSIQIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+   E+ ++   +++
Sbjct: 75  AISKALSPVLDVADPIDKAYRLEISSPGIDRPLVRRSDFERYAGHLAKIEMAVAHQGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
             G + G  +    L ++     + +E ++ +  + +  ARL++TDEL+  S+    
Sbjct: 135 FRGVLQGVEDNAVRLHRDD-IRNNDDESEVMLVMEDIADARLVLTDELIAESMRRGK 190


>gi|300024994|ref|YP_003757605.1| hypothetical protein Hden_3493 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526815|gb|ADJ25284.1| protein of unknown function DUF150 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 213

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 107/177 (60%), Gaps = 6/177 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMTLRDCE 70
           R   + G+A +++++++PV+E++ FR V++ +       + ++Q+  ER DG++T+ DCE
Sbjct: 20  RFLRETGVAAEVAAIVEPVLEDLGFRLVRVKVQGGGATADKIVQLMAERPDGSITVDDCE 79

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ +SP+LDV + + G YRLEVSSPGIDRP+VR SDF  W+GH    E+  + G ++K
Sbjct: 80  TISKQVSPVLDVADPVSGAYRLEVSSPGIDRPLVRPSDFEDWSGHEAKIELTEAVGGRRK 139

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
             G + G  +    +E +     +     + +    +  ARL++TDEL+R +L    
Sbjct: 140 FKGMLEGFEDGEVRIEAD---TGEHGIQHLGLPVHLISDARLVLTDELIREALARAK 193


>gi|296448219|ref|ZP_06890115.1| protein of unknown function DUF150 [Methylosinus trichosporium
           OB3b]
 gi|296254259|gb|EFH01390.1| protein of unknown function DUF150 [Methylosinus trichosporium
           OB3b]
          Length = 251

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 3/183 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+ G+ G+A  I+ + +PV+ ++ +R V+  +L +  ++LQI  ER DG MT+ DCE
Sbjct: 15  DEPRLCGETGVAARIAHIAEPVLAQLGYRLVRARILSQNGVILQIMAERPDGTMTIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQ 129
             SQA+SP LDVE+ I   YRLE+SSPGIDRP+VR SDF R  G     E+ L     ++
Sbjct: 75  AASQALSPELDVEDAIADAYRLELSSPGIDRPLVRVSDFRRAIGQEAKIELTLPLASGRK 134

Query: 130 KLIGKIMGTSETG--FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +  G I+     G       E++      E  + +    L  A+L++T+ L+R SL    
Sbjct: 135 RFRGDIIAVEGEGREAVATLERKDAPPDEEKTVRLPLRDLDEAKLMLTEALIRESLRAGK 194

Query: 188 SYA 190
           + A
Sbjct: 195 ADA 197


>gi|217978444|ref|YP_002362591.1| protein of unknown function DUF150 [Methylocella silvestris BL2]
 gi|259585790|sp|B8EIB0|RIMP_METSB RecName: Full=Ribosome maturation factor rimP
 gi|217503820|gb|ACK51229.1| protein of unknown function DUF150 [Methylocella silvestris BL2]
          Length = 279

 Score =  197 bits (502), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 102/179 (56%), Gaps = 2/179 (1%)

Query: 3   STHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG 62
            T       EPR+  + G+A  I+ +  PV+ ++ +R V++ L  +  + +QI  ER DG
Sbjct: 8   ETDSAALMAEPRLVAETGVAARIAHIATPVLADLGYRLVRVKLSAQDGMTVQIMAERPDG 67

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            MT+ DCE +S A+SP LDVE++++  YRLE+SSPGIDRP+VR SDF R        E+ 
Sbjct: 68  AMTVNDCEAVSAALSPALDVEDVVKQAYRLEISSPGIDRPLVRVSDFRRALDQEARIELR 127

Query: 123 LSSGDKQKLIGKIMGTSETG--FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           L    +++  G I G +  G    +  E+   K    ++  +  D L  A+L++T+EL+
Sbjct: 128 LGLDGRKRFRGLIKGVTGAGAAAVVTLERVDAKPGEAVEAVLPLDDLAEAKLVLTEELI 186


>gi|121601902|ref|YP_989500.1| hypothetical protein BARBAKC583_1251 [Bartonella bacilliformis
           KC583]
 gi|259585726|sp|A1UU47|RIMP_BARBK RecName: Full=Ribosome maturation factor rimP
 gi|120614079|gb|ABM44680.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
          Length = 209

 Score =  197 bits (501), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 70/188 (37%), Positives = 113/188 (60%), Gaps = 4/188 (2%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           + +T  +    EPR+F + G+   + +++ P+++ + +R V++ LL    L LQI  ER 
Sbjct: 4   INATEIMDDIDEPRLFEEDGVEALVVALVAPLLKPLGYRLVRVKLLGLNGLTLQIMAERA 63

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCE +S+ ISP+LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W G+    E
Sbjct: 64  DGTMTIEDCEIISKTISPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGYTAKIE 123

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  ++K  G +   ++ GF L  +   E    E  + +SF ++ +A L++TD+L+R
Sbjct: 124 TRTIVNGRRKFRGALENVTQDGFILNIDAAPE----EETVYVSFSNITNAHLVLTDKLIR 179

Query: 181 ASLNNYGS 188
            +L    +
Sbjct: 180 DALKKDKN 187


>gi|254471146|ref|ZP_05084549.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
 gi|211960288|gb|EEA95485.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
          Length = 196

 Score =  197 bits (501), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 66/171 (38%), Positives = 101/171 (59%), Gaps = 2/171 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
            + +PRI  + GL   ++ +++PVI ++ +R V+I +       LQI  ER DG M + D
Sbjct: 2   DETDPRIVKEKGLEARVAEIVEPVIVDLGYRLVRIRVNGNNGCTLQIMAERPDGTMAVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S A+SP LDV++ I G Y LE+SSPGIDRP+VR  DF RW GHVV  E+ +    +
Sbjct: 62  CEEISHAVSPALDVDDPISGAYHLEISSPGIDRPLVRAGDFERWVGHVVKIEMSVPQAGR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           ++  G I+G  E    +       ++  +    +  D + SA L++TDEL+
Sbjct: 122 KRYRGHIIGVEEGNAVIRMTD--VQEGQDEAAHLPLDEIGSAVLVLTDELI 170


>gi|260461983|ref|ZP_05810228.1| protein of unknown function DUF150 [Mesorhizobium opportunistum
           WSM2075]
 gi|259032230|gb|EEW33496.1| protein of unknown function DUF150 [Mesorhizobium opportunistum
           WSM2075]
          Length = 215

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/183 (41%), Positives = 115/183 (62%), Gaps = 2/183 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           + S+ + RI  + G+   I+ +IQPV+  + FR V++ L  +  L LQI  ER+DG MT+
Sbjct: 4   MTSEGDDRIIRESGIDARIALIIQPVLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTMTV 63

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DCEE+S+A+SP LDV++ IE  Y LEVSSPGIDRP+VRKSDF+ W GH+V  E  +   
Sbjct: 64  EDCEEVSRAVSPALDVDDPIEKAYHLEVSSPGIDRPLVRKSDFVTWTGHLVKMETSVVVA 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           D+++  GKI    E    +E++K       E  + + +D++   RLI+TD+L+R +L+  
Sbjct: 124 DRKRFKGKIAEAGENDVLIERDKAAY--GEEPTVRVPYDAISETRLILTDDLIRDALSKD 181

Query: 187 GSY 189
              
Sbjct: 182 NRA 184


>gi|83942069|ref|ZP_00954531.1| hypothetical protein EE36_07533 [Sulfitobacter sp. EE-36]
 gi|83953119|ref|ZP_00961841.1| hypothetical protein NAS141_12461 [Sulfitobacter sp. NAS-14.1]
 gi|83842087|gb|EAP81255.1| hypothetical protein NAS141_12461 [Sulfitobacter sp. NAS-14.1]
 gi|83847889|gb|EAP85764.1| hypothetical protein EE36_07533 [Sulfitobacter sp. EE-36]
          Length = 192

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K+  LQ+  +R DG + + +   +SQ
Sbjct: 5   LIAKAAIDRRMAEIITPVIEDMGFELVRVRLMSGKSTTLQVMADRPDGGIEVDELALISQ 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +IS ++DVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  SISAVMDVEDPILDEYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETGELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E        E  I + FD L  A+L++TD+L++  L    +   +
Sbjct: 125 LAGVEDDEVLINVE--------EGTIGLKFDWLTDAKLVLTDDLIKEMLRQRKASGAI 174


>gi|114705361|ref|ZP_01438269.1| hypothetical protein FP2506_10491 [Fulvimarina pelagi HTCC2506]
 gi|114540146|gb|EAU43266.1| hypothetical protein FP2506_10491 [Fulvimarina pelagi HTCC2506]
          Length = 202

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 65/181 (35%), Positives = 106/181 (58%), Gaps = 2/181 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           ++ E RI  + GL   I+S+++P IE+  +R V++ +       +QI  ER DG M +  
Sbjct: 2   TEKETRIVTEDGLEAKIASIVEPAIEQTGYRLVRVRVSGMNGKTVQIMAERPDGTMDVEG 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S+AISP+L+ E+ ++G Y LE+SSPGIDRP+VR SDF  W G ++  E      D+
Sbjct: 62  CEEVSRAISPVLETEDPVDGAYHLELSSPGIDRPLVRVSDFETWAGFLMKLETSRLVADR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  GKI+        +E+++          + I  D++  ARL++TD+L+ ASL    +
Sbjct: 122 KRYRGKIVKVENGTITIERDQPAY--GEPASVEIPLDAVADARLVLTDDLIEASLKADKA 179

Query: 189 Y 189
            
Sbjct: 180 R 180


>gi|161170253|gb|ABX59223.1| uncharacterized protein conserved in bacteria [uncultured marine
           bacterium EB000_55B11]
 gi|297183782|gb|ADI19905.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
          Length = 222

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 8/172 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++S++QPVIE++ +  V+I L+  K   LQI  ++ +G + + DC ++S 
Sbjct: 43  LIAKSAIDKRMASIVQPVIEDLGYELVRIRLMSGKATTLQIMADKPNGGIDVNDCSKIST 102

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS ILDVE+ IE  Y LEVSSPG+DRP+ R  DF  WNG  +  E       +++  G 
Sbjct: 103 EISAILDVEDPIEAEYALEVSSPGMDRPLTRLKDFQTWNGFEIKVETSELIDGQRRFKGL 162

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
             G  +    +E        + +  I + F+ L  A+L++TDEL+ AS    
Sbjct: 163 SRGIEDNDVLIE--------IPQGTIGLDFEWLSDAKLVLTDELVAASQKGR 206


>gi|13474626|ref|NP_106195.1| hypothetical protein mlr5550 [Mesorhizobium loti MAFF303099]
 gi|34223133|sp|Q98BJ1|RIMP_RHILO RecName: Full=Ribosome maturation factor rimP
 gi|14025380|dbj|BAB51981.1| mlr5550 [Mesorhizobium loti MAFF303099]
          Length = 215

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/182 (41%), Positives = 114/182 (62%), Gaps = 2/182 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
            S+ + RI  + G+   I+ ++QPV+  + FR V++ L  +  L LQI  ER+DG MT+ 
Sbjct: 5   ASEGDDRIIRESGIDARIALIVQPVLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTMTVE 64

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCEE+S+A+SP LDV++ IE  Y LEVSSPGIDRP+VRKSDF+ W GH+V  E  +   D
Sbjct: 65  DCEEVSRAVSPALDVDDPIEKAYHLEVSSPGIDRPLVRKSDFVTWTGHLVKMETSVIVAD 124

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  GKI    E    +E++K       E  + + +D++   RLI+TD+L+R +L+   
Sbjct: 125 RKRFKGKIAEAGENDVLIERDKAAY--GEEPTVRVPYDAIAETRLILTDDLIRDALSKDN 182

Query: 188 SY 189
             
Sbjct: 183 RA 184


>gi|258543557|ref|YP_003188990.1| hypothetical protein APA01_25050 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634635|dbj|BAI00611.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256637691|dbj|BAI03660.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256640745|dbj|BAI06707.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256643800|dbj|BAI09755.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256646855|dbj|BAI12803.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256649908|dbj|BAI15849.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256652898|dbj|BAI18832.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655952|dbj|BAI21879.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 201

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 100/178 (56%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELS 73
           +    GL   ++++I P +E+M +  V++++L  +   +QI  +R DG+ + + DCE +S
Sbjct: 14  LSTHSGLEARVAALIAPAVEDMGYEIVRVAVLGRERPTVQIMADRKDGSLINVEDCERIS 73

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            A+  +LDVE+ I G + LEVSS GIDRP+ R  D+ R+ GH V  E++L    +++  G
Sbjct: 74  HAVGAVLDVEDPIPGAWTLEVSSAGIDRPLTRAKDWNRFAGHQVKAEVLLPVNGRRRFSG 133

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            ++G+  T   +  +   E       +A+  + L  ARL++TD L+ AS     S  G
Sbjct: 134 TVLGSDGTVARMRLDDGTE-------VALPLEELRRARLVLTDALIEASARMVQSAPG 184


>gi|83950735|ref|ZP_00959468.1| hypothetical protein ISM_06535 [Roseovarius nubinhibens ISM]
 gi|83838634|gb|EAP77930.1| hypothetical protein ISM_06535 [Roseovarius nubinhibens ISM]
          Length = 190

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ F  V++ L+  K   LQI  ER +G + + +C  +S 
Sbjct: 5   LIAKAAIDRRLAEIVTPVIEDLGFELVRLRLMGGKTDTLQIMAERPEGGIEVDECARIST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  EVSAVLDVEDPIIEAYTLEVSSPGIDRPLTRLKDFETFEGYEAKIETSELIDGRKRFKGV 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E        E  I + FD L  A+L++TDEL++  L        L
Sbjct: 125 LAGVEGEEVLINVE--------EGTIGLQFDWLADAKLVLTDELIKEMLRQRKDAGVL 174


>gi|114762089|ref|ZP_01441557.1| hypothetical protein 1100011001331_R2601_14160 [Pelagibaca
           bermudensis HTCC2601]
 gi|114545113|gb|EAU48116.1| hypothetical protein R2601_14160 [Roseovarius sp. HTCC2601]
          Length = 195

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 3/174 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ F  V++ L+  K   LQI  ER +G + + +C ++S 
Sbjct: 4   LIAKSAIDRRLAEIVTPVIEDLGFELVRLRLMSGKTATLQIMAERPEGGIEVDECADIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 64  AVSAVLDVEDPIIDAYALEVSSPGIDRPLTRLKDFDTYEGYEAKIETQEMIDGRKRWRGV 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           + G   +      E  G     E  I + FD L  A+LI+TD+L+R  L    +
Sbjct: 124 LAGIEGSEVLFNIEGEG---GEEQTIGLQFDWLSDAKLILTDDLIRDMLRARKA 174


>gi|319779772|ref|YP_004139248.1| hypothetical protein Mesci_0023 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317165660|gb|ADV09198.1| protein of unknown function DUF150 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 214

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 75/182 (41%), Positives = 113/182 (62%), Gaps = 2/182 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
            S+ + RI  + G+   I+ ++QPV+  + FR V++ L  +  L LQI  ER+DG MT+ 
Sbjct: 5   ASEGDDRIIRESGIDARIALIVQPVLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTMTVE 64

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCEE+S+A+SP LDV++ IE  Y LEVSSPGIDRP+VRKSDF  W GH+V  E  +   D
Sbjct: 65  DCEEVSRAVSPALDVDDPIEKAYHLEVSSPGIDRPLVRKSDFTTWTGHLVKMETSIVVAD 124

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  GKI    E    +E++K       E  + + +D++   RLI+TD+L+R +L+   
Sbjct: 125 RKRFKGKIAEAGEDDVLIERDKAAY--GEEPTVRVPYDAIADVRLILTDDLIRDALSKDN 182

Query: 188 SY 189
             
Sbjct: 183 RA 184


>gi|317046739|ref|YP_004114387.1| hypothetical protein Pat9b_0506 [Pantoea sp. At-9b]
 gi|316948356|gb|ADU67831.1| protein of unknown function DUF150 [Pantoea sp. At-9b]
          Length = 202

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ ++G + + DC ++S  
Sbjct: 51  VGLSTLEQKLTELISAPVEALGYELVGIEFIRGRTSTLRIYIDSEEG-INVDDCADVSHQ 109

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 110 VSAVMDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFAGEEVGLVLRMAVQNRRKWQGII 169

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 170 KSVEGEMITVTVEGKDEV--------FALSNIQKANLV 199


>gi|304392763|ref|ZP_07374703.1| conserved hypothetical protein [Ahrensia sp. R2A130]
 gi|303295393|gb|EFL89753.1| conserved hypothetical protein [Ahrensia sp. R2A130]
          Length = 213

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/181 (34%), Positives = 107/181 (59%), Gaps = 2/181 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
           + + + R+  + GL   ++SVI PVIE++ +R V++ +++   L +QIF ER DG M++ 
Sbjct: 20  NDRADARLVKEEGLDAKVASVIAPVIEDLGYRLVRVRMVDHNGLTMQIFAERPDGTMSVG 79

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           +CE +S+A+SP+LDVE+ +   Y LEV SPGIDRP+VR+SDF  W GH    E       
Sbjct: 80  ECEIISKALSPVLDVEDPVTQAYNLEVGSPGIDRPLVRRSDFETWTGHTAKIETAYLVDG 139

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  GK++        L ++     +  +  +     ++ SA L++TD+L+R +L    
Sbjct: 140 RKRFRGKLVAVDGEIVKLRRDNAASGEDKDADV--PLHAIASASLVLTDDLIREALKRDK 197

Query: 188 S 188
           S
Sbjct: 198 S 198


>gi|329113269|ref|ZP_08242052.1| Ribosome maturation factor RimP [Acetobacter pomorum DM001]
 gi|326697410|gb|EGE49068.1| Ribosome maturation factor RimP [Acetobacter pomorum DM001]
          Length = 201

 Score =  194 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELS 73
           +    GL   ++++I P +E+M +  V++++L  +   +QI  +R DG+ + + DCE +S
Sbjct: 14  LSTHSGLEARVAALIAPAVEDMGYEIVRVAVLGRERPTVQIMADRKDGSLINVEDCERIS 73

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            A+  +LDVE+ I G + LEVSS GIDRP+ R  D+ R+ GH    E++L    +++  G
Sbjct: 74  HAVGAVLDVEDPIPGAWTLEVSSAGIDRPLTRAKDWNRFAGHQAKAEVLLPVNGRRRFSG 133

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            ++G+  T   +  +   E       +A+  + L  ARL++TD L+ AS        G
Sbjct: 134 VVLGSDGTVARMRLDDGTE-------VALPLEELRRARLVLTDALIEASARMVQPAPG 184


>gi|254707322|ref|ZP_05169150.1| hypothetical protein BpinM_10195 [Brucella pinnipedialis
           M163/99/10]
 gi|261314804|ref|ZP_05954001.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261303830|gb|EEY07327.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
          Length = 192

 Score =  194 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 2/165 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
              ++++PVI  + FR V++ L       LQI  ER DG MT+ DCE +S+ ++P+LDVE
Sbjct: 3   KWQALLEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVSRTVAPVLDVE 62

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++K  G+I+       
Sbjct: 63  DPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVETSIVHEGRKKFRGRIVVGEADSV 122

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
            +E ++      NE  + I FD +  ARL++TD+L+R +L    +
Sbjct: 123 TIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRDALRKDKA 165


>gi|188532502|ref|YP_001906299.1| YhbC-like protein [Erwinia tasmaniensis Et1/99]
 gi|188027544|emb|CAO95391.1| YhbC-like protein [Erwinia tasmaniensis Et1/99]
          Length = 192

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 41  VGLSTLEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQ 99

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 100 VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYARFTGEEVSLVLRMAVQNRRKWQGII 159

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E   E          +  ++  A L+
Sbjct: 160 KSVEGEMITVAVEGNDEV--------FALSNIQKANLV 189


>gi|209544213|ref|YP_002276442.1| hypothetical protein Gdia_2067 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|259585817|sp|A9HF10|RIMP_GLUDA RecName: Full=Ribosome maturation factor rimP
 gi|209531890|gb|ACI51827.1| protein of unknown function DUF150 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 207

 Score =  194 bits (493), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 55/174 (31%), Positives = 99/174 (56%), Gaps = 8/174 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
            GL   +++++ PV+ +M F  V++++L  ++  +QI  +R DG  + + DCE++S A+ 
Sbjct: 9   TGLDAKVAAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVG 68

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G ++G
Sbjct: 69  AVLDVEDPLPGAWTLEVSSAGIDRPLTRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLG 128

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
             +    L  E   E       +A+    +  ARL++TDEL+ AS +   +  G
Sbjct: 129 AEDGFGRLRLEDGTE-------VALPLSDMRRARLVLTDELIAASAHMMRAPGG 175


>gi|255264773|ref|ZP_05344115.1| hypothetical protein TR2A62_2551 [Thalassiobium sp. R2A62]
 gi|255107108|gb|EET49782.1| hypothetical protein TR2A62_2551 [Thalassiobium sp. R2A62]
          Length = 190

 Score =  194 bits (493), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +IQP++E M +  V+I L+  K   LQI  ++ DG + + DC E+S 
Sbjct: 4   LVAKAAIDRRIAEIIQPMMESMGYELVRIRLMSGKATTLQIMAQKPDGTIEVDDCAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF +W G+    E       +++  G+
Sbjct: 64  AVSALLDVEDPILDAYELEVSSPGIDRPLTRVKDFAQWEGYEAKIETDELIDGRRRFKGQ 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +E E        E  I + F+ L  A+L++TD+L+R  L       
Sbjct: 124 LAGTEGDEILIEIE--------EGTIGLKFEWLSDAKLVLTDDLIRDVLRGRKDAG 171


>gi|146337224|ref|YP_001202272.1| hypothetical protein BRADO0050 [Bradyrhizobium sp. ORS278]
 gi|259585732|sp|A4YJE6|RIMP_BRASO RecName: Full=Ribosome maturation factor rimP
 gi|146190030|emb|CAL74022.1| conserved hypothetical protein; putative YhbC-like protein
           [Bradyrhizobium sp. ORS278]
          Length = 233

 Score =  194 bits (493), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 55/159 (34%), Positives = 96/159 (60%), Gaps = 2/159 (1%)

Query: 31  PVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           PV++ M +R V+I +  E    +Q+  ER DG M + DCE +S+A+SP+LD+ + I+  Y
Sbjct: 15  PVLQGMGYRLVRIRISGESGCTVQVMAERPDGTMQIEDCEAVSRALSPVLDIADPIDRAY 74

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
           RLE+SSPGIDRP+VR+SDF R  GH+V  E+ ++  ++++  G I G    G  + ++  
Sbjct: 75  RLEISSPGIDRPLVRRSDFERHVGHLVKIEMAVAYQNRKRFRGIIKGVEGDGVRITRDDV 134

Query: 151 GEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
            +    +  + +    +  A++++TDEL+  S+    + 
Sbjct: 135 AKD--ADPDVVLPMADIGDAKMVLTDELIAESMRRGKAA 171


>gi|126728007|ref|ZP_01743823.1| hypothetical protein SSE37_18492 [Sagittula stellata E-37]
 gi|126710972|gb|EBA10022.1| hypothetical protein SSE37_18492 [Sagittula stellata E-37]
          Length = 189

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +    G+   ++ ++ PVIE+M F  V++ L      LLQI  ER +G + + +C E+S 
Sbjct: 4   MIAKTGMDLRLAEIVAPVIEDMGFELVRLRLQSGNTPLLQIMAERPEGGIEVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 64  AVSAVLDVEDPIVEAYTLEVSSPGIDRPLTRLKDFDTYEGYEARLETTDLIEGRKRFRGI 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G   +   +         ++E  I + FD L  A+L++TDEL+R  L    + A
Sbjct: 124 LAGVEGSEVLIN--------VDEGTIGLQFDWLADAKLVMTDELVREMLKARKTAA 171


>gi|27362892|gb|AAN86998.1| YhbC-like protein [Pectobacterium carotovorum subsp. carotovorum]
          Length = 191

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +L
Sbjct: 45  LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVL 103

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I     
Sbjct: 104 DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVIKAVDG 163

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 164 EMITITVEGKDEV--------FALSNIQKANLV 188


>gi|288959697|ref|YP_003450038.1| hypothetical protein AZL_028560 [Azospirillum sp. B510]
 gi|288912005|dbj|BAI73494.1| hypothetical protein AZL_028560 [Azospirillum sp. B510]
          Length = 166

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 9/172 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M   G I  +I P +E M +  V++ +   +  +LQI  ER DG  MT+ DC ++S+++S
Sbjct: 1   MDATGRIEQIITPSVEAMGYEVVRVQISGGQRAVLQIMAERADGAPMTVEDCADISRSVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ R  DF R+ G     E  ++   +++  G + G
Sbjct: 61  ALLDVEDPIREAYTLEVSSPGIDRPLTRLKDFERFAGFEARLESRMAIDGRKRFKGMLKG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
             +    ++ E+   +        + FD++L A+L++TD+L+RAS       
Sbjct: 121 VEDGLVCIDTEQGAAR--------LEFDNILRAKLVLTDDLIRASQEQQDGP 164


>gi|253686984|ref|YP_003016174.1| hypothetical protein PC1_0583 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753562|gb|ACT11638.1| protein of unknown function DUF150 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 191

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +L
Sbjct: 45  LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVL 103

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I     
Sbjct: 104 DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVIKAVDG 163

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 164 EMITITVEGKDEV--------FALSNIQKANLV 188


>gi|84684620|ref|ZP_01012521.1| hypothetical protein 1099457000260_RB2654_13384 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667599|gb|EAQ14068.1| hypothetical protein RB2654_13384 [Rhodobacterales bacterium
           HTCC2654]
          Length = 194

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +++PVIE+M +  V++ L       LQI  ++ +G + + D   ++ 
Sbjct: 4   LVARTAIDRRLADIVRPVIEDMGYELVRLRLQGGNTQTLQIMADKPEGGIEVDDLSAINT 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+   LDVE+ IEG Y LEVSSPGIDRP+ R  DF  W+G +   E       +++  G 
Sbjct: 64  ALGATLDVEDPIEGEYNLEVSSPGIDRPLTRYKDFDTWDGWIAKVETSELIEGRKRFKGT 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT +    +E E +GE     + I ++FD L  A+L++TDEL+   L       
Sbjct: 124 LQGTEDGEILIEIEDKGE----PVTIGLTFDLLADAKLVLTDELIAEMLKQRKDAG 175


>gi|300718579|ref|YP_003743382.1| hypothetical protein [Erwinia billingiae Eb661]
 gi|299064415|emb|CAX61535.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 195

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ ++G + + DC ++S  +S + 
Sbjct: 49  LEQKLTELITAPVEALGYELVGIEFVRGRTSTLRIYIDSENG-INVDDCADVSHQVSAVF 107

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + + ++ G  V+  + ++  +++K  G I     
Sbjct: 108 DVEDPITVAYNLEVSSPGLERPLFTAAHYAQFIGEEVSLVLRMAVQNRRKWQGIIKSVEG 167

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E   E          +  ++  A L+
Sbjct: 168 EMITVAVEGNDEV--------FALSNIQKANLV 192


>gi|330991198|ref|ZP_08315150.1| Ribosome maturation factor rimP [Gluconacetobacter sp. SXCC-1]
 gi|329761691|gb|EGG78183.1| Ribosome maturation factor rimP [Gluconacetobacter sp. SXCC-1]
          Length = 227

 Score =  192 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 101/191 (52%), Gaps = 11/191 (5%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
            +  F      P +    GL   I++++ P + +M F  V++++L  ++  +QI  +R D
Sbjct: 6   RAAFFALDADLPFL---TGLDARIAAMVAPALADMGFDLVRVAVLGRESPTVQIMADRAD 62

Query: 62  GN-MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           G  + + DCE++S A+  ILDVE+ + G + LEVSS GIDRP+ R  D+ R+ GH+   E
Sbjct: 63  GTLIAIEDCEQISHAVGAILDVEDPLPGAWTLEVSSAGIDRPLTRAKDWERFAGHLARAE 122

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           + +    +++  G ++G  +    +  +   E       +A+ F  +  ARL++TDEL+ 
Sbjct: 123 MNMPIEGRKRFAGIVLGARDGHGLMRLDDGTE-------VALPFAEMRKARLVLTDELIE 175

Query: 181 ASLNNYGSYAG 191
           AS       A 
Sbjct: 176 ASARMMRPAAS 186


>gi|83313173|ref|YP_423437.1| hypothetical protein amb4074 [Magnetospirillum magneticum AMB-1]
 gi|123540593|sp|Q2VZU7|RIMP_MAGSA RecName: Full=Ribosome maturation factor rimP
 gi|82948014|dbj|BAE52878.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
           magneticum AMB-1]
          Length = 166

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 6/170 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M L   + ++I P ++ M +  V++ L  ++ L LQI  +R DG  M + DC ++S+++S
Sbjct: 1   MDLQSRLEALIAPSLDAMGYELVRVQLQGKQRLTLQIMADRKDGVMMAVDDCADISRSVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ R  DF+ W G     E       +++  GK++G
Sbjct: 61  ALLDVEDPISAAYTLEVSSPGIDRPLTRAKDFVAWAGFEAKMESCQPIDGRKRFRGKLLG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
             E G  +             +IAI    +  A+L++TDEL+ A+L +  
Sbjct: 121 LDEAGVNVRL-----VIEAAGEIAIPLADVRGAKLVLTDELIAATLKDQE 165


>gi|260576185|ref|ZP_05844178.1| protein of unknown function DUF150 [Rhodobacter sp. SW2]
 gi|259021665|gb|EEW24968.1| protein of unknown function DUF150 [Rhodobacter sp. SW2]
          Length = 199

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ P IE + F  V+I L+  K   LQI  ER DG + + +C  +S 
Sbjct: 4   LIAKTAIDRRLAEIVTPAIEGLGFELVRIRLMGGKVRTLQIMAERPDGGIVVDECAAIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S ILDVE+ +E +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAILDVEDPVEENYILEVSSPGIDRPLTRLKDFDTWQGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G       +E E        E  I + FD L  A+L++TDEL+   L    +  
Sbjct: 124 LRGIQGDEVLIEIE--------EGIIGLQFDWLSDAKLVLTDELIAEMLRQRKASG 171


>gi|84514879|ref|ZP_01002242.1| hypothetical protein SKA53_11683 [Loktanella vestfoldensis SKA53]
 gi|84511038|gb|EAQ07492.1| hypothetical protein SKA53_11683 [Loktanella vestfoldensis SKA53]
          Length = 191

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +I PVIE+M F  V++ L+  K   LQI V+R DG + +  C ++S 
Sbjct: 4   LIAKAAVDRRIAEIITPVIEDMGFEVVRVRLMTGKESTLQIMVQRPDGTIEVDQCAQIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS +LDVE+ I   Y LEVSSPGIDRP+ R  DF +W G     E       +++  G+
Sbjct: 64  AISAVLDVEDPIVDVYTLEVSSPGIDRPLTRLKDFDQWKGFEAKIETEELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +        D++E  I + F  L  A+L++TD+L+R  L        +
Sbjct: 124 LAGIDGDEVLI--------DIDEGTIGLKFAWLSDAKLVLTDDLIRDVLRGRKDAGQI 173


>gi|254038336|ref|ZP_04872394.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|293449506|ref|ZP_06663927.1| hypothetical protein ECCG_02538 [Escherichia coli B088]
 gi|226839960|gb|EEH71981.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|291322596|gb|EFE62025.1| hypothetical protein ECCG_02538 [Escherichia coli B088]
          Length = 163

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 12  VGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 70

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 71  VSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 130

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 131 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 160


>gi|23016101|ref|ZP_00055861.1| COG0779: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 165

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 7/170 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M L   + ++I P ++ M +  V++ L  ++ L LQI  +R DG  M + DC ++S+++S
Sbjct: 1   MDLQSRLEALIAPSLDAMGYELVRVQLQGKQRLTLQIMADRKDGVMMAVDDCADISRSVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ R  DF  W G     E       +++  GK++G
Sbjct: 61  ALLDVEDPISAAYTLEVSSPGIDRPLTRAKDFAAWAGFEAKMESCQPIDGRKRFRGKLLG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
             ETG  +         +   +++I    +  A+L++TDEL+ A++ +  
Sbjct: 121 LDETGAHV------RLAVETGEVSIPLADVRGAKLVLTDELIAATVKDQE 164


>gi|254450327|ref|ZP_05063764.1| hypothetical protein OA238_928 [Octadecabacter antarcticus 238]
 gi|198264733|gb|EDY89003.1| hypothetical protein OA238_928 [Octadecabacter antarcticus 238]
          Length = 209

 Score =  191 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 98/178 (55%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +I P +E++ F  V++ L+  K  +LQI  +R DG + + DC E+S 
Sbjct: 16  LIARAAMDRRITEIITPTVEDLGFEVVRVRLMTGKESILQIMAQRPDGTIEVDDCGEIST 75

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I+  + LEVSSPGIDRP+ R  DF++W+G+    E       +++  G 
Sbjct: 76  AVSALLDVEDPIKDVFTLEVSSPGIDRPLTRFKDFVQWDGNEAKIETEELIDGRRRFKGM 135

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +E E +GE     + I + F+ L  A+L++T++L+R  L        +
Sbjct: 136 LRGVEGDEVLIEIEDKGE----PVTIGLKFEWLTDAKLVLTEDLIRGVLRGRKDAGQI 189


>gi|293393155|ref|ZP_06637470.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291424301|gb|EFE97515.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 187

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  
Sbjct: 36  VGLSTLEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQ 94

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ +   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 95  VSAVLDVEDPVTVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGII 154

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 155 KSVEGEMITVTVDGKDEV--------FALSNIQKANLV 184


>gi|237730090|ref|ZP_04560571.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908696|gb|EEH94614.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 163

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 12  VGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 70

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRP+     ++R+ G  V   + ++  +++K  G I
Sbjct: 71  VSAVMDVEDPITVAYNLEVSSPGLDRPLFTAEHYVRFLGEEVTLVLRMAVQNRRKWQGVI 130

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 131 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 160


>gi|144897847|emb|CAM74711.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 171

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 9/173 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M L   + ++  P +E M +  V++      +  LQ+  ER DG NMT+ DC ++S+++S
Sbjct: 1   MDLQQRLEALFAPTLEAMGYEMVRVMFQGRSHPTLQVMAERKDGRNMTVDDCADISRSLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I+  Y LEVSSPGIDRP+ R  DF+ W G  V  E ++    +++  GK++G
Sbjct: 61  ALLDVEDPIQSAYALEVSSPGIDRPLTRAKDFITWAGFEVKLEALVGVDGRKRFRGKLLG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
                  L  +          ++++    L SA+L++TDEL+ A   +    A
Sbjct: 121 LEGEAVRLFADG--------AEVSVPLTDLKSAKLVLTDELIAAVTRDEDPQA 165


>gi|115522228|ref|YP_779139.1| hypothetical protein RPE_0199 [Rhodopseudomonas palustris BisA53]
 gi|122298064|sp|Q07V75|RIMP_RHOP5 RecName: Full=Ribosome maturation factor rimP
 gi|115516175|gb|ABJ04159.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           BisA53]
          Length = 272

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 107/185 (57%), Gaps = 2/185 (1%)

Query: 3   STHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG 62
               L    EPR+  + G+A  +++V  PV+  M +R V+I +  E    +QI  ER DG
Sbjct: 19  PAELLELLSEPRLVVEPGVAARVAAVAGPVLHGMGYRLVRIKVSGELGCTVQIMAERPDG 78

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            M + DCE +S+A+SP+LDV + I+  YRLEVSSPGIDRP+VR+SDF R+ G++V  ++ 
Sbjct: 79  TMLIEDCEAISKALSPVLDVADPIDKAYRLEVSSPGIDRPLVRRSDFERYAGYLVKIDMA 138

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +    +++  G + G       L++E     D   + + I  + +  ARL++TDEL+  S
Sbjct: 139 VPHQGRKRFRGILGGIEGDAVHLQREGVRGDDDPAVLLTI--EDISDARLVLTDELIAES 196

Query: 183 LNNYG 187
           +    
Sbjct: 197 MRRGK 201


>gi|91212592|ref|YP_542578.1| hypothetical protein UTI89_C3601 [Escherichia coli UTI89]
 gi|170680823|ref|YP_001745444.1| hypothetical protein EcSMS35_3466 [Escherichia coli SMS-3-5]
 gi|187775784|ref|ZP_02798170.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188024835|ref|ZP_02774257.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189010333|ref|ZP_02806320.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189401946|ref|ZP_02779158.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189403296|ref|ZP_02794595.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189404085|ref|ZP_02787144.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189404788|ref|ZP_02811062.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189405548|ref|ZP_02822778.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|191168030|ref|ZP_03029830.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|193062091|ref|ZP_03043187.1| conserved hypothetical protein [Escherichia coli E22]
 gi|193067407|ref|ZP_03048375.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194430231|ref|ZP_03062729.1| conserved hypothetical protein [Escherichia coli B171]
 gi|194438776|ref|ZP_03070862.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|208808473|ref|ZP_03250810.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812353|ref|ZP_03253682.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820794|ref|ZP_03261114.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400717|ref|YP_002272641.1| hypothetical protein ECH74115_4491 [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327331|ref|ZP_03443414.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|237706077|ref|ZP_04536558.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|293406781|ref|ZP_06650707.1| hypothetical protein ECGG_02091 [Escherichia coli FVEC1412]
 gi|298382522|ref|ZP_06992119.1| hypothetical protein ECFG_02283 [Escherichia coli FVEC1302]
 gi|331643870|ref|ZP_08345001.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331648971|ref|ZP_08350059.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331654776|ref|ZP_08355776.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331674708|ref|ZP_08375467.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|331679251|ref|ZP_08379923.1| putative cytoplasmic protein [Escherichia coli H591]
 gi|332279999|ref|ZP_08392412.1| conserved hypothetical protein [Shigella sp. D9]
 gi|26110182|gb|AAN82368.1|AE016767_128 Hypothetical protein yhbC [Escherichia coli CFT073]
 gi|91074166|gb|ABE09047.1| conserved hypothetical protein [Escherichia coli UTI89]
 gi|170518541|gb|ACB16719.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
 gi|187770840|gb|EDU34684.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016402|gb|EDU54524.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001090|gb|EDU70076.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358736|gb|EDU77155.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361416|gb|EDU79835.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189367607|gb|EDU86023.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374130|gb|EDU92546.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189379725|gb|EDU98141.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|190901899|gb|EDV61648.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|192932311|gb|EDV84909.1| conserved hypothetical protein [Escherichia coli E22]
 gi|192959364|gb|EDV89799.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194411732|gb|EDX28056.1| conserved hypothetical protein [Escherichia coli B171]
 gi|194422248|gb|EDX38249.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|208728274|gb|EDZ77875.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733630|gb|EDZ82317.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740917|gb|EDZ88599.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209162117|gb|ACI39550.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217319698|gb|EEC28123.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|226899117|gb|EEH85376.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|291426787|gb|EFE99819.1| hypothetical protein ECGG_02091 [Escherichia coli FVEC1412]
 gi|298277662|gb|EFI19178.1| hypothetical protein ECFG_02283 [Escherichia coli FVEC1302]
 gi|323376934|gb|ADX49202.1| protein of unknown function DUF150 [Escherichia coli KO11]
 gi|331037341|gb|EGI09565.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331042718|gb|EGI14860.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331048158|gb|EGI20235.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331068147|gb|EGI39543.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|331073316|gb|EGI44639.1| putative cytoplasmic protein [Escherichia coli H591]
 gi|332102351|gb|EGJ05697.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 154

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 3   VGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 62  VSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 122 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 151


>gi|307129383|ref|YP_003881399.1| hypothetical protein Dda3937_02343 [Dickeya dadantii 3937]
 gi|306526912|gb|ADM96842.1| conserved protein [Dickeya dadantii 3937]
          Length = 150

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPISVAYNLEVSSPGLERPLFTAAHYERFAGEEVSLVLRMAVQNRRKWQGIIKSVEG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|83595107|ref|YP_428859.1| hypothetical protein Rru_A3778 [Rhodospirillum rubrum ATCC 11170]
 gi|91208354|sp|Q2RMS3|RIMP_RHORT RecName: Full=Ribosome maturation factor rimP
 gi|83578021|gb|ABC24572.1| Protein of unknown function DUF150 [Rhodospirillum rubrum ATCC
           11170]
          Length = 225

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 3/176 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAI 76
           D  + G +  ++ P ++ M +  V+++LL  +N  LQ+  ER DG  MT+ DCE +S+A+
Sbjct: 35  DARMMGHLEKLLAPTLDAMGYEVVRVTLLGSQNPTLQVMAERLDGVAMTVSDCETISRAL 94

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             +LDVE+ I G Y LE+SSPGIDRP+ R  D+ R+ GH    E        +++ G ++
Sbjct: 95  GALLDVEDPIAGRYSLEISSPGIDRPLTRPKDYARFAGHEARIETDRLIEGHRRMKGLLL 154

Query: 137 GTSET-GFFLE-KEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           G  E     L   E +  +D    ++ I F +++ A+L++TD L+  +L +  + A
Sbjct: 155 GIDEDRTVRLRLIEGKAAEDGTLPEVEIPFGAIVKAKLLLTDALIAKALKDAEALA 210


>gi|191172206|ref|ZP_03033749.1| conserved hypothetical protein [Escherichia coli F11]
 gi|194433780|ref|ZP_03066055.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|227887893|ref|ZP_04005698.1| UPF0090 protein yhbC [Escherichia coli 83972]
 gi|238902274|ref|YP_002928070.1| hypothetical protein BWG_2874 [Escherichia coli BW2952]
 gi|291284546|ref|YP_003501364.1| hypothetical protein G2583_3895 [Escherichia coli O55:H7 str.
           CB9615]
 gi|331659459|ref|ZP_08360401.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331664784|ref|ZP_08365689.1| putative cytoplasmic protein [Escherichia coli TA143]
 gi|331669999|ref|ZP_08370844.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331684819|ref|ZP_08385411.1| putative cytoplasmic protein [Escherichia coli H299]
 gi|67476527|sp|P0A8A9|RIMP_ECOL6 RecName: Full=Ribosome maturation factor rimP
 gi|67476528|sp|P0A8B0|RIMP_ECO57 RecName: Full=Ribosome maturation factor rimP
 gi|67476531|sp|P0A8B1|RIMP_SHIFL RecName: Full=Ribosome maturation factor rimP
 gi|91208385|sp|Q32BG3|RIMP_SHIDS RecName: Full=Ribosome maturation factor rimP
 gi|91208386|sp|Q3YX71|RIMP_SHISS RecName: Full=Ribosome maturation factor rimP
 gi|166979883|sp|A1AG75|RIMP_ECOK1 RecName: Full=Ribosome maturation factor rimP
 gi|259585759|sp|C4ZSR1|RIMP_ECOBW RecName: Full=Ribosome maturation factor rimP
 gi|259585820|sp|B6I1P5|RIMP_ECOSE RecName: Full=Ribosome maturation factor rimP
 gi|259585821|sp|B1LFS2|RIMP_ECOSM RecName: Full=Ribosome maturation factor rimP
 gi|259585822|sp|Q1R6G7|RIMP_ECOUT RecName: Full=Ribosome maturation factor rimP
 gi|259585823|sp|B5YS60|RIMP_ECO5E RecName: Full=Ribosome maturation factor rimP
 gi|259585825|sp|B1IQV1|RIMP_ECOLC RecName: Full=Ribosome maturation factor rimP
 gi|259585826|sp|B7UJ65|RIMP_ECO27 RecName: Full=Ribosome maturation factor rimP
 gi|12517781|gb|AAG58306.1|AE005545_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|606110|gb|AAA57973.1| gtg start; differences from database entry [Escherichia coli str.
           K-12 substr. MG1655]
 gi|13363524|dbj|BAB37474.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|30042769|gb|AAP18492.1| hypothetical protein S3428 [Shigella flexneri 2a str. 2457T]
 gi|56383831|gb|AAN44678.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|73857184|gb|AAZ89891.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81242632|gb|ABB63342.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|115514590|gb|ABJ02665.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|190907516|gb|EDV67112.1| conserved hypothetical protein [Escherichia coli F11]
 gi|194418043|gb|EDX34137.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|209758318|gb|ACI77471.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758320|gb|ACI77472.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758322|gb|ACI77473.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758324|gb|ACI77474.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758326|gb|ACI77475.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|222034889|emb|CAP77632.1| UPF0090 protein yhbC [Escherichia coli LF82]
 gi|227835289|gb|EEJ45755.1| UPF0090 protein yhbC [Escherichia coli 83972]
 gi|238860383|gb|ACR62381.1| conserved protein [Escherichia coli BW2952]
 gi|281602554|gb|ADA75538.1| hypothetical protein SFxv_3524 [Shigella flexneri 2002017]
 gi|290764419|gb|ADD58380.1| hypothetical protein G2583_3895 [Escherichia coli O55:H7 str.
           CB9615]
 gi|323936134|gb|EGB32428.1| yhbC protein [Escherichia coli E1520]
 gi|323941728|gb|EGB37907.1| yhbC [Escherichia coli E482]
 gi|323946974|gb|EGB42990.1| yhbC protein [Escherichia coli H120]
 gi|323951310|gb|EGB47185.1| yhbC [Escherichia coli H252]
 gi|323957681|gb|EGB53395.1| yhbC [Escherichia coli H263]
 gi|323961058|gb|EGB56673.1| yhbC [Escherichia coli H489]
 gi|323966352|gb|EGB61786.1| yhbC [Escherichia coli M863]
 gi|323970265|gb|EGB65536.1| yhbC [Escherichia coli TA007]
 gi|323979111|gb|EGB74189.1| yhbC [Escherichia coli TW10509]
 gi|324115224|gb|EGC09188.1| yhbC [Escherichia fergusonii B253]
 gi|324119537|gb|EGC13419.1| yhbC [Escherichia coli E1167]
 gi|325498753|gb|EGC96612.1| hypothetical protein ECD227_2850 [Escherichia fergusonii ECD227]
 gi|331054041|gb|EGI26070.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331058032|gb|EGI30014.1| putative cytoplasmic protein [Escherichia coli TA143]
 gi|331062912|gb|EGI34826.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331078434|gb|EGI49640.1| putative cytoplasmic protein [Escherichia coli H299]
          Length = 152

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 149


>gi|91208384|sp|Q31W49|RIMP_SHIBS RecName: Full=Ribosome maturation factor rimP
 gi|81247001|gb|ABB67709.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 152

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V I  +      L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 149


>gi|138894779|ref|YP_001125232.1| hypothetical protein GTNG_1113 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134266292|gb|ABO66487.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 170

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P++ EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  
Sbjct: 18  VTETVEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGVVSEKLSEK 76

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+  + DF++  G  V  +       +++  G++    
Sbjct: 77  LDEVDPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYEPIAGEKQFEGELTAFD 136

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   L  + RG +      +AI ++ + SARL V
Sbjct: 137 GTTVTLSVKDRGRQK----TVAIPYEKVASARLAV 167


>gi|271499172|ref|YP_003332197.1| hypothetical protein Dd586_0598 [Dickeya dadantii Ech586]
 gi|270342727|gb|ACZ75492.1| protein of unknown function DUF150 [Dickeya dadantii Ech586]
          Length = 152

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTEMISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+   + +  + G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPISVAYNLEVSSPGLDRPLFTAAHYAHFVGEEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 120 KSVEGEMITVTVEGKDEV--------FALSNIQKANLV 149


>gi|114769757|ref|ZP_01447367.1| hypothetical protein OM2255_09321 [alpha proteobacterium HTCC2255]
 gi|114549462|gb|EAU52344.1| hypothetical protein OM2255_09321 [alpha proteobacterium HTCC2255]
          Length = 183

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 8/172 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++S++QPVIE++ +  V+I L+  K   LQI  ++ +G + + DC ++S 
Sbjct: 4   LIAKSAIDKRMASIVQPVIEDLGYELVRIRLMSGKATTLQIMADKPNGGIDVNDCSKIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS ILDVE+ IE  Y LEVSSPG+DRP+ R  DF  WNG  +  E       +++  G 
Sbjct: 64  EISAILDVEDPIEAEYALEVSSPGMDRPLTRLKDFQTWNGFEIKVETSELIDGQRRFKGL 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
             G  +    +E        + +  I + F+ L  A+L++TDEL+ AS    
Sbjct: 124 SRGIEDNDVLIE--------IPQGTIGLDFEWLSDAKLVLTDELVAASQKGR 167


>gi|156935696|ref|YP_001439612.1| hypothetical protein ESA_03563 [Cronobacter sakazakii ATCC BAA-894]
 gi|259585769|sp|A7MQE3|RIMP_ENTS8 RecName: Full=Ribosome maturation factor rimP
 gi|156533950|gb|ABU78776.1| hypothetical protein ESA_03563 [Cronobacter sakazakii ATCC BAA-894]
          Length = 160

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  
Sbjct: 9   VGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-ITVDDCADVSHQ 67

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 68  VSSVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARYTGEEVTLVLRMAVQNRRKWQGII 127

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 128 KAVDGEMITVAVDGKDEV--------FALSNIQRANLV 157


>gi|89109935|ref|AP_003715.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|110643411|ref|YP_671141.1| hypothetical protein ECP_3258 [Escherichia coli 536]
 gi|110807039|ref|YP_690559.1| hypothetical protein SFV_3200 [Shigella flexneri 5 str. 8401]
 gi|157159426|ref|YP_001464647.1| hypothetical protein EcE24377A_3655 [Escherichia coli E24377A]
 gi|157162655|ref|YP_001459973.1| hypothetical protein EcHS_A3362 [Escherichia coli HS]
 gi|161367518|ref|NP_289746.2| hypothetical protein Z4531 [Escherichia coli O157:H7 EDL933]
 gi|161485816|ref|NP_708971.3| hypothetical protein SF3211 [Shigella flexneri 2a str. 301]
 gi|161486109|ref|NP_755794.2| hypothetical protein c3927 [Escherichia coli CFT073]
 gi|161486428|ref|NP_838681.2| hypothetical protein S3428 [Shigella flexneri 2a str. 2457T]
 gi|161950037|ref|YP_404833.2| hypothetical protein SDY_3349 [Shigella dysenteriae Sd197]
 gi|161986442|ref|YP_312126.2| hypothetical protein SSON_3316 [Shigella sonnei Ss046]
 gi|162139721|ref|NP_312078.3| hypothetical protein ECs4051 [Escherichia coli O157:H7 str. Sakai]
 gi|170082707|ref|YP_001732027.1| hypothetical protein ECDH10B_3344 [Escherichia coli str. K-12
           substr. DH10B]
 gi|187733192|ref|YP_001881913.1| hypothetical protein SbBS512_E3601 [Shigella boydii CDC 3083-94]
 gi|188492035|ref|ZP_02999305.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|195938390|ref|ZP_03083772.1| hypothetical protein EscherichcoliO157_18476 [Escherichia coli
           O157:H7 str. EC4024]
 gi|218550455|ref|YP_002384246.1| hypothetical protein EFER_3149 [Escherichia fergusonii ATCC 35469]
 gi|218555742|ref|YP_002388655.1| hypothetical protein ECIAI1_3320 [Escherichia coli IAI1]
 gi|218560242|ref|YP_002393155.1| hypothetical protein ECS88_3554 [Escherichia coli S88]
 gi|218691462|ref|YP_002399674.1| hypothetical protein ECED1_3830 [Escherichia coli ED1a]
 gi|218696877|ref|YP_002404544.1| hypothetical protein EC55989_3590 [Escherichia coli 55989]
 gi|218701941|ref|YP_002409570.1| hypothetical protein ECIAI39_3667 [Escherichia coli IAI39]
 gi|218706792|ref|YP_002414311.1| hypothetical protein ECUMN_3652 [Escherichia coli UMN026]
 gi|226524751|ref|NP_417639.6| ribosome maturation factor for 30S subunits [Escherichia coli str.
           K-12 substr. MG1655]
 gi|229597230|ref|YP_001723532.2| hypothetical protein EcolC_0528 [Escherichia coli ATCC 8739]
 gi|229775958|ref|YP_858789.2| hypothetical protein APECO1_3260 [Escherichia coli APEC O1]
 gi|254163114|ref|YP_003046222.1| hypothetical protein ECB_03037 [Escherichia coli B str. REL606]
 gi|254795121|ref|YP_003079958.1| hypothetical protein ECSP_4145 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018910|ref|ZP_05432775.1| hypothetical protein ShiD9_08333 [Shigella sp. D9]
 gi|256024254|ref|ZP_05438119.1| hypothetical protein E4_12823 [Escherichia sp. 4_1_40B]
 gi|307313123|ref|ZP_07592749.1| protein of unknown function DUF150 [Escherichia coli W]
 gi|312968491|ref|ZP_07782700.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|123342478|sp|Q0T0B1|RIMP_SHIF8 RecName: Full=Ribosome maturation factor rimP
 gi|123343572|sp|Q0TCT9|RIMP_ECOL5 RecName: Full=Ribosome maturation factor rimP
 gi|259585755|sp|A7ZS68|RIMP_ECO24 RecName: Full=Ribosome maturation factor rimP
 gi|259585756|sp|B7NKN9|RIMP_ECO7I RecName: Full=Ribosome maturation factor rimP
 gi|259585757|sp|B7N0V5|RIMP_ECO81 RecName: Full=Ribosome maturation factor rimP
 gi|259585758|sp|B7M078|RIMP_ECO8A RecName: Full=Ribosome maturation factor rimP
 gi|259585760|sp|B1XGY2|RIMP_ECODH RecName: Full=Ribosome maturation factor rimP
 gi|259585761|sp|A8A4Y6|RIMP_ECOHS RecName: Full=Ribosome maturation factor rimP
 gi|259585764|sp|B7MB91|RIMP_ECO45 RecName: Full=Ribosome maturation factor rimP
 gi|259585765|sp|B7LHN5|RIMP_ECO55 RecName: Full=Ribosome maturation factor rimP
 gi|259585766|sp|B7NDF6|RIMP_ECOLU RecName: Full=Ribosome maturation factor rimP
 gi|259585770|sp|B7LR39|RIMP_ESCF3 RecName: Full=Ribosome maturation factor rimP
 gi|259586197|sp|B2U205|RIMP_SHIB3 RecName: Full=Ribosome maturation factor rimP
 gi|269849638|sp|P0A8A8|RIMP_ECOLI RecName: Full=Ribosome maturation factor rimP
 gi|85675966|dbj|BAE77216.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|110345003|gb|ABG71240.1| putative cytoplasmic protein [Escherichia coli 536]
 gi|110616587|gb|ABF05254.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|157068335|gb|ABV07590.1| conserved hypothetical protein [Escherichia coli HS]
 gi|157081456|gb|ABV21164.1| conserved hypothetical protein [Escherichia coli E24377A]
 gi|169890542|gb|ACB04249.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187430184|gb|ACD09458.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
 gi|188487234|gb|EDU62337.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|218353609|emb|CAU99801.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218357996|emb|CAQ90642.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
 gi|218362510|emb|CAR00134.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|218367011|emb|CAR04782.1| conserved hypothetical protein [Escherichia coli S88]
 gi|218371927|emb|CAR19783.1| conserved hypothetical protein [Escherichia coli IAI39]
 gi|218429026|emb|CAR09973.2| conserved hypothetical protein [Escherichia coli ED1a]
 gi|218433889|emb|CAR14806.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|226510978|gb|AAC76204.4| ribosome maturation factor for 30S subunits [Escherichia coli str.
           K-12 substr. MG1655]
 gi|242378715|emb|CAQ33505.1| ribosome maturation protein [Escherichia coli BL21(DE3)]
 gi|253975015|gb|ACT40686.1| hypothetical protein ECB_03037 [Escherichia coli B str. REL606]
 gi|253979171|gb|ACT44841.1| hypothetical protein ECD_03037 [Escherichia coli BL21(DE3)]
 gi|254594521|gb|ACT73882.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|294489705|gb|ADE88461.1| conserved hypothetical protein [Escherichia coli IHE3034]
 gi|306907034|gb|EFN37542.1| protein of unknown function DUF150 [Escherichia coli W]
 gi|307555266|gb|ADN48041.1| putative cytoplasmic protein [Escherichia coli ABU 83972]
 gi|309703598|emb|CBJ02938.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
 gi|312286709|gb|EFR14620.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|313648588|gb|EFS13030.1| hypothetical protein SF2457T_3054 [Shigella flexneri 2a str. 2457T]
 gi|315137758|dbj|BAJ44917.1| conserved protein [Escherichia coli DH1]
 gi|315617253|gb|EFU97862.1| conserved hypothetical protein [Escherichia coli 3431]
 gi|320181446|gb|EFW56364.1| hypothetical protein SGB_01316 [Shigella boydii ATCC 9905]
 gi|320194656|gb|EFW69286.1| hypothetical protein EcoM_03098 [Escherichia coli WV_060327]
 gi|323165128|gb|EFZ50918.1| hypothetical protein SS53G_4591 [Shigella sonnei 53G]
 gi|323189207|gb|EFZ74491.1| hypothetical protein ECRN5871_2808 [Escherichia coli RN587/1]
 gi|327255186|gb|EGE66786.1| hypothetical protein ECSTEC7V_5219 [Escherichia coli STEC_7v]
 gi|332086098|gb|EGI91260.1| hypothetical protein SB521682_3815 [Shigella boydii 5216-82]
 gi|332752330|gb|EGJ82720.1| hypothetical protein SF434370_3403 [Shigella flexneri 4343-70]
 gi|332752857|gb|EGJ83242.1| hypothetical protein SFK671_3816 [Shigella flexneri K-671]
 gi|333014971|gb|EGK34315.1| hypothetical protein SFK227_3827 [Shigella flexneri K-227]
          Length = 150

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|126734453|ref|ZP_01750200.1| hypothetical protein RCCS2_09839 [Roseobacter sp. CCS2]
 gi|126717319|gb|EBA14183.1| hypothetical protein RCCS2_09839 [Roseobacter sp. CCS2]
          Length = 192

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +I PV+E+M F  V++ L+  K  +LQ+ V+R DG + + +C ++S 
Sbjct: 5   LIAKAAIDRRIAEIITPVVEDMGFEVVRVRLMTGKESILQVMVQRPDGQIEVDECGQVST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S ILDVE+ I   Y LEVSSPGIDRP+ R  DF +W G     E       +++  G 
Sbjct: 65  ALSAILDVEDPILDVYTLEVSSPGIDRPLTRMKDFDQWEGFEAKIETDELIDGRRRFKGP 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT      +         + E  I + F+ L  A+L++TDEL+R  L        +
Sbjct: 125 LAGTEGDEVLI--------TIAEGTIGLKFEWLSDAKLVLTDELIRDVLRGRKDAGQI 174


>gi|194445687|ref|YP_002042545.1| hypothetical protein SNSL254_A3546 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|195873562|ref|ZP_02697406.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197248900|ref|YP_002148214.1| hypothetical protein SeAg_B3477 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264321|ref|ZP_03164395.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197301026|ref|ZP_02663047.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204928262|ref|ZP_03219462.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205357196|ref|ZP_02345817.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205357561|ref|ZP_02571247.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205359197|ref|ZP_02668054.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205360600|ref|ZP_02684674.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|259586187|sp|B5F6U0|RIMP_SALA4 RecName: Full=Ribosome maturation factor rimP
 gi|259586193|sp|B4TJ08|RIMP_SALHS RecName: Full=Ribosome maturation factor rimP
 gi|259586194|sp|B4T700|RIMP_SALNS RecName: Full=Ribosome maturation factor rimP
 gi|62129432|gb|AAX67135.1| Hypothetical protein yhbC [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194404350|gb|ACF64572.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194409325|gb|ACF69544.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|195633168|gb|EDX51582.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197212603|gb|ACH50000.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242576|gb|EDY25196.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197289178|gb|EDY28547.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204322584|gb|EDZ07781.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323251|gb|EDZ11090.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205331278|gb|EDZ18042.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205337765|gb|EDZ24529.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205348549|gb|EDZ35180.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 154

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 3   VGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 62  VSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 122 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 151


>gi|283788202|ref|YP_003368067.1| hypothetical protein ROD_46621 [Citrobacter rodentium ICC168]
 gi|282951656|emb|CBG91356.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
          Length = 154

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 3   VGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I
Sbjct: 62  VSAVMDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFLGEEVSLVLRMAVQNRRKWQGVI 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 122 KAVDGEMITVAVEGKDEV--------FALSNIQKANLV 151


>gi|161984849|ref|YP_409537.2| hypothetical protein SBO_3212 [Shigella boydii Sb227]
          Length = 150

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +      L+I+++ +DG + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSEDG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|251791037|ref|YP_003005758.1| hypothetical protein Dd1591_3467 [Dickeya zeae Ech1591]
 gi|247539658|gb|ACT08279.1| protein of unknown function DUF150 [Dickeya zeae Ech1591]
          Length = 154

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  
Sbjct: 3   VGLSTLEQKLTEMISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDDCADVSHQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+   + +  + G  V+  + ++  +++K  G I
Sbjct: 62  VSAVLDVEDPISVAYNLEVSSPGLDRPLFTAAHYAHFVGEEVSLVLRMAVQNRRKWQGII 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 122 KSVEGEMITVTVDGKEEV--------FALSNIQKANLV 151


>gi|291616008|ref|YP_003518750.1| YhbC [Pantoea ananatis LMG 20103]
 gi|291151038|gb|ADD75622.1| YhbC [Pantoea ananatis LMG 20103]
 gi|327396259|dbj|BAK13681.1| hypothetical UPF0090 protein YhbC [Pantoea ananatis AJ13355]
          Length = 154

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 3   VGLSTLEQKLTELVSAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I
Sbjct: 62  VSAVMDVEDPITVPYHLEVSSPGLDRPLFTAEHYARFTGDEVSLVLRMAVQNRRKWQGII 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E   E          +  ++  A L+
Sbjct: 122 KSVEGEMITVNVEGNDEV--------FALSNIQKANLV 151


>gi|205354192|ref|YP_002227993.1| hypothetical protein SG3179 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|259586192|sp|B5REN8|RIMP_SALG2 RecName: Full=Ribosome maturation factor rimP
 gi|205273973|emb|CAR38978.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326629313|gb|EGE35656.1| Ribosome maturation factor rimP [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 154

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 9/157 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
           G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +
Sbjct: 4   GLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQV 62

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I 
Sbjct: 63  SAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIK 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                   +  E + E          +  ++  A L+
Sbjct: 123 AVDGEMITVTVEGKDEV--------FALSNIQKANLV 151


>gi|310817129|ref|YP_003965093.1| Ribosome maturation factor rimP [Ketogulonicigenium vulgare Y25]
 gi|308755864|gb|ADO43793.1| Ribosome maturation factor rimP [Ketogulonicigenium vulgare Y25]
          Length = 218

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 15/187 (8%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++QPVIE+M F  V+I ++  K   LQI  ++ DG + + DC  +S 
Sbjct: 4   LIARAAIDRRVAEIVQPVIEDMGFELVRIRVMTGKETTLQIMAQKPDGTIEVDDCAAIST 63

Query: 75  AISP-----------ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           A+S            +LDVE+ I  +Y LEVSSPGIDRP+ R  DF  W+G+    E   
Sbjct: 64  AVSAGLDPPPPAVSAVLDVEDPIVENYTLEVSSPGIDRPLTRLKDFDLWDGYTAKIETEE 123

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +++  G++ GT      +E +   E     + I + F+ L  A+L++TDEL+R  L
Sbjct: 124 LIDGRRRFKGELRGTEGDEILIELDDAAE----PVTIGLKFEWLSDAKLVLTDELIRDVL 179

Query: 184 NNYGSYA 190
                  
Sbjct: 180 RGRKDAG 186


>gi|54040273|sp|P67219|RIMP_SALTI RecName: Full=Ribosome maturation factor rimP
 gi|54042668|sp|P67218|RIMP_SALTY RecName: Full=Ribosome maturation factor rimP
 gi|91208382|sp|Q57JH7|RIMP_SALCH RecName: Full=Ribosome maturation factor rimP
 gi|91208383|sp|Q5PLA8|RIMP_SALPA RecName: Full=Ribosome maturation factor rimP
 gi|259586212|sp|A9N734|RIMP_SALPB RecName: Full=Ribosome maturation factor rimP
 gi|259586213|sp|C0PZ56|RIMP_SALPC RecName: Full=Ribosome maturation factor rimP
 gi|259586214|sp|B5BGJ7|RIMP_SALPK RecName: Full=Ribosome maturation factor rimP
 gi|259586216|sp|B5QZW0|RIMP_SALEP RecName: Full=Ribosome maturation factor rimP
 gi|259586218|sp|A9MP34|RIMP_SALAR RecName: Full=Ribosome maturation factor rimP
 gi|323131648|gb|ADX19078.1| Ribosome maturation factor rimP [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 152

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 149


>gi|290511547|ref|ZP_06550916.1| hypothetical protein HMPREF0485_03317 [Klebsiella sp. 1_1_55]
 gi|289776540|gb|EFD84539.1| hypothetical protein HMPREF0485_03317 [Klebsiella sp. 1_1_55]
          Length = 154

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 3   VGLSTLEQKLTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 62  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGII 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 122 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 151


>gi|259585827|sp|A8AQ61|RIMP_CITK8 RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYARFLGEEVTLVLRMAVQNRRKWQGVI 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 149


>gi|162147157|ref|YP_001601618.1| hypothetical protein GDI_1362 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785734|emb|CAP55305.1| conserved protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 193

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 97/168 (57%), Gaps = 8/168 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVE 83
           +++++ PV+ +M F  V++++L  ++  +QI  +R DG  + + DCE++S A+  +LDVE
Sbjct: 1   MAAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVGAVLDVE 60

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G ++G  +   
Sbjct: 61  DPLPGAWTLEVSSAGIDRPLTRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLGAEDGFG 120

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            L  E   E       +A+    +  ARL++TDEL+ AS +   +  G
Sbjct: 121 RLRLEDGTE-------VALPLSDMRRARLVLTDELIAASAHMMRAPGG 161


>gi|170765477|ref|ZP_02900288.1| conserved hypothetical protein [Escherichia albertii TW07627]
 gi|170124623|gb|EDS93554.1| conserved hypothetical protein [Escherichia albertii TW07627]
          Length = 150

 Score =  187 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G      + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEATLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|288933402|ref|YP_003437461.1| hypothetical protein Kvar_0519 [Klebsiella variicola At-22]
 gi|288888131|gb|ADC56449.1| protein of unknown function DUF150 [Klebsiella variicola At-22]
          Length = 152

 Score =  187 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 60  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 149


>gi|308189111|ref|YP_003933242.1| UPF0090 protein yhbC [Pantoea vagans C9-1]
 gi|308059621|gb|ADO11793.1| UPF0090 protein yhbC [Pantoea vagans C9-1]
          Length = 150

 Score =  187 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + +  V I  +  +  +L+I+++ +DG + + DC ++S  +S ++
Sbjct: 4   LEQKLTELVSAPVEALGYELVGIEFVRSRTSILRIYIDSEDG-INVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPITVPYNLEVSSPGLDRPLFTAEHYTRFMGEEVSLVLRMAVQNRRKWQGTIKSVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E   E          +  ++  A L+
Sbjct: 123 EMITVHVEGSDEV--------FALSNIQKANLV 147


>gi|161353583|ref|NP_462201.2| hypothetical protein STM3288 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161486781|ref|NP_806884.2| hypothetical protein t3206 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|161501916|ref|NP_457670.2| hypothetical protein STY3469 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|161936211|ref|YP_152295.2| hypothetical protein SPA3156 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|162139540|ref|YP_218216.2| hypothetical protein SC3229 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194470097|ref|ZP_03076081.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194735644|ref|YP_002116238.1| hypothetical protein SeSA_A3478 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|198245424|ref|YP_002217261.1| hypothetical protein SeD_A3645 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387280|ref|ZP_03213892.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205358508|ref|ZP_02656955.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205359739|ref|ZP_02831643.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|213052983|ref|ZP_03345861.1| hypothetical protein Salmoneentericaenterica_08732 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213425431|ref|ZP_03358181.1| hypothetical protein SentesTyphi_07043 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213581726|ref|ZP_03363552.1| hypothetical protein SentesTyph_11179 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213621933|ref|ZP_03374716.1| hypothetical protein SentesTyp_32176 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213645860|ref|ZP_03375913.1| hypothetical protein SentesTy_00020 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|228879515|ref|YP_001573258.2| hypothetical protein SARI_04336 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|229307088|ref|YP_001590259.2| hypothetical protein SPAB_04100 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|229597265|ref|YP_002047317.2| hypothetical protein SeHA_C3583 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|259586191|sp|B5FI15|RIMP_SALDC RecName: Full=Ribosome maturation factor rimP
 gi|259586195|sp|B4TWE0|RIMP_SALSV RecName: Full=Ribosome maturation factor rimP
 gi|194456461|gb|EDX45300.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711146|gb|ACF90367.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197939940|gb|ACH77273.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604378|gb|EDZ02923.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205333894|gb|EDZ20658.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205343499|gb|EDZ30263.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|267995485|gb|ACY90370.1| hypothetical protein STM14_3971 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|320087735|emb|CBY97499.1| UPF0090 protein yhbC [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|322716286|gb|EFZ07857.1| transcription elongation factor NusA [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|326625039|gb|EGE31384.1| phage shock protein A [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 150

 Score =  187 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I     
Sbjct: 63  DVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|296114400|ref|ZP_06833054.1| hypothetical protein GXY_01428 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979161|gb|EFG85885.1| hypothetical protein GXY_01428 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 210

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 97/172 (56%), Gaps = 8/172 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
            GL   I+ +I P + +M F  V+++++  ++  +QI  +R DG+ +T+ DCE++S A+ 
Sbjct: 9   TGLDARIADMIGPALVDMGFELVRVAVMGRESPTVQIMADRADGSQITINDCEQISHAVG 68

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G ++G
Sbjct: 69  AILDVEDPLSGEWTLEVSSAGIDRPLTRPKDWDRYAGHLAKAEMNMPVDGRKRFSGIVLG 128

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
             +    +  +   E       +A+ F+ +  ARL++TD L+ AS       
Sbjct: 129 ARDGHGLMRLDDGAE-------VALPFEEMRKARLVLTDALIEASARMAHPG 173


>gi|229593531|ref|YP_001456060.2| hypothetical protein CKO_04571 [Citrobacter koseri ATCC BAA-895]
          Length = 150

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYARFLGEEVTLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|75760861|ref|ZP_00740875.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491645|gb|EAO54847.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 174

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 16  RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 74

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 75  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 134

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 135 GKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 173


>gi|56419794|ref|YP_147112.1| hypothetical protein GK1259 [Geobacillus kaustophilus HTA426]
 gi|81347603|sp|Q5L0J2|RIMP_GEOKA RecName: Full=Ribosome maturation factor rimP
 gi|56379636|dbj|BAD75544.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 157

 Score =  187 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P+++EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  
Sbjct: 5   VTETVEQLVTPILDEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGAVSEKLSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++    
Sbjct: 64  LDEVDPIPHNYFLEVSSPGAERPLKKAKDFAKAIGKNVYIKTYEPIEGEKQFEGELTAFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   L  + RG +      +AI ++ + SARL V
Sbjct: 124 GTTVTLLVKDRGRQK----TVAIPYEKVASARLAV 154


>gi|206577891|ref|YP_002236419.1| hypothetical protein KPK_0544 [Klebsiella pneumoniae 342]
 gi|229269511|ref|YP_001337240.2| hypothetical protein KPN_03578 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259585803|sp|B5XSX2|RIMP_KLEP3 RecName: Full=Ribosome maturation factor rimP
 gi|259585806|sp|A6TEI9|RIMP_KLEP7 RecName: Full=Ribosome maturation factor rimP
 gi|206566949|gb|ACI08725.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
          Length = 150

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++
Sbjct: 4   LEQKLTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|259585819|sp|B2VGS4|RIMP_ERWT9 RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYARFTGEEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E   E          +  ++  A L+
Sbjct: 120 KSVEGEMITVAVEGNDEV--------FALSNIQKANLV 149


>gi|254439640|ref|ZP_05053134.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
 gi|198255086|gb|EDY79400.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
          Length = 188

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 4/172 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   I+ +I P IE++ F  V++ L+  K  +LQI  ++ DG + + DC E+S A+S +L
Sbjct: 1   MDRRITEIITPTIEDLGFEVVRVRLMTGKESILQIMAQKPDGTIEVDDCGEISTAVSALL 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I+  + LEVSSPGIDRP+ R  DF++W+G+    E       +++  G + G   
Sbjct: 61  DVEDPIKDVFTLEVSSPGIDRPLTRLKDFVQWDGNEAKIETEELIDGRRRFKGMLRGVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
               +E E+ GE     + I + F+ L  A+L++T++L+R  L        +
Sbjct: 121 DEVLIEIEENGE----PVTIGLKFEWLTDAKLVLTEDLIRGVLRGRKDAGQI 168


>gi|311277857|ref|YP_003940088.1| hypothetical protein Entcl_0527 [Enterobacter cloacae SCF1]
 gi|308747052|gb|ADO46804.1| protein of unknown function DUF150 [Enterobacter cloacae SCF1]
          Length = 150

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++
Sbjct: 4   LEQKLTEMLTAPVEALGFELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|269103409|ref|ZP_06156106.1| UPF0090 domain-containing protein [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163307|gb|EEZ41803.1| UPF0090 domain-containing protein [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 151

 Score =  186 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 83/156 (53%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++P +  + +  V +  +    +  L+IF+++++G + + DC E+S+ +S
Sbjct: 2   TALETQLTEMLEPSVAALGYELVGLEFIRAGEHSTLRIFIDKENG-INVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSLVLKMAMGNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  L  +   E          +  ++  A L+
Sbjct: 121 VDGELVTLNVDGNEE--------CFALSNISKANLV 148


>gi|304320432|ref|YP_003854075.1| hypothetical protein PB2503_04292 [Parvularcula bermudensis
           HTCC2503]
 gi|303299334|gb|ADM08933.1| hypothetical protein PB2503_04292 [Parvularcula bermudensis
           HTCC2503]
          Length = 174

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 6/166 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              ++ ++ P+IE   +  +++ L   K   LQI  ER DG MT  DC  LS+A+S +L+
Sbjct: 5   IAALTDLLLPIIETEGYELIRLRLTGAKQQTLQIMAERPDGTMTAEDCARLSRAVSAVLE 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I G Y LEVSSPGIDRP+ R  D+ RW G V   E+      +++  G + G    
Sbjct: 65  EADPISGEYVLEVSSPGIDRPLTRLKDYARWEGFVAKIELSQPVEGQKRYRGTLAGVEND 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
              ++ +        E    I F  +   +L++TDEL+  SL    
Sbjct: 125 DVCIDLDGE------EETALIPFSIIAGGKLVMTDELIAESLRRAK 164


>gi|196247597|ref|ZP_03146299.1| protein of unknown function DUF150 [Geobacillus sp. G11MC16]
 gi|259585816|sp|A4IMD3|RIMP_GEOTN RecName: Full=Ribosome maturation factor rimP
 gi|196212381|gb|EDY07138.1| protein of unknown function DUF150 [Geobacillus sp. G11MC16]
          Length = 157

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P++ EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  
Sbjct: 5   VTETVEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGVVSEKLSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+  + DF++  G  V  +       +++  G++    
Sbjct: 64  LDEVDPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYEPIAGEKQFEGELTAFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   L  + RG +      +AI ++ + SARL V
Sbjct: 124 GTTVTLSVKDRGRQK----TVAIPYEKVASARLAV 154


>gi|227112573|ref|ZP_03826229.1| hypothetical protein PcarbP_06402 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227327825|ref|ZP_03831849.1| hypothetical protein PcarcW_11031 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 150

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITITVEGKDEV--------FALSNIQKANLV 147


>gi|329295929|ref|ZP_08253265.1| hypothetical protein Pstas_03447 [Plautia stali symbiont]
          Length = 150

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ ++G + + DC ++S  +S ++
Sbjct: 4   LEQKLTELISAPVEALGYELVGIEFIRGRTSTLRIYIDSEEG-INVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG DRP+     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGFDRPLFTAEHYARFAGEEVSLVLRMAVQNRRKWQGIIKSVEG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E   E          +  ++  A L+
Sbjct: 123 EMITVTVEGNDEV--------FALSNIQKANLV 147


>gi|259907040|ref|YP_002647396.1| YhbC-like protein [Erwinia pyrifoliae Ep1/96]
 gi|292900767|ref|YP_003540136.1| hypothetical protein EAM_3073 [Erwinia amylovora ATCC 49946]
 gi|224962662|emb|CAX54117.1| YhbC-like protein [Erwinia pyrifoliae Ep1/96]
 gi|291200615|emb|CBJ47747.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|310766252|gb|ADP11202.1| YhbC-like protein [Erwinia sp. Ejp617]
          Length = 152

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 1   MGLSTLEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYDRFTGEEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E   E          +  ++  A L+
Sbjct: 120 KSVEGEMITVAVEGNDEV--------FALSNIQKANLV 149


>gi|161501882|ref|YP_048824.2| hypothetical protein ECA0710 [Pectobacterium atrosepticum SCRI1043]
          Length = 150

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  VA  + ++  +++K +G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVAVVLRMAVQNRRKWLGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITITVEGKDEV--------FALSNIQKANLV 147


>gi|261419459|ref|YP_003253141.1| hypothetical protein GYMC61_2043 [Geobacillus sp. Y412MC61]
 gi|319766274|ref|YP_004131775.1| hypothetical protein GYMC52_1166 [Geobacillus sp. Y412MC52]
 gi|261375916|gb|ACX78659.1| protein of unknown function DUF150 [Geobacillus sp. Y412MC61]
 gi|317111140|gb|ADU93632.1| protein of unknown function DUF150 [Geobacillus sp. Y412MC52]
          Length = 157

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P+++EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  
Sbjct: 5   VTETVEQLVTPILDEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGAVSEKLSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++    
Sbjct: 64  LDEVDPIPYNYFLEVSSPGAERPLKKAKDFAKAIGKNVYIKTYEPIEGEKQFEGELTAFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   L  + RG +      +AI ++ + SARL V
Sbjct: 124 GTTVTLLVKDRGRQK----TVAIPYEKVASARLAV 154


>gi|262274885|ref|ZP_06052696.1| UPF0090 domain-containing protein [Grimontia hollisae CIP 101886]
 gi|262221448|gb|EEY72762.1| UPF0090 domain-containing protein [Grimontia hollisae CIP 101886]
          Length = 151

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 86/158 (54%), Gaps = 10/158 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   + ++++  ++ + +  V +  +   ++  L+I+++ ++G +T+ DC E+S+ +S
Sbjct: 2   TGLEKQLLALLEAPVKALDYELVGLEFVRAGQHSTLRIYIDHENG-ITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ +   + R+ GH V   + ++  +++K  G+I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAEHYQRFVGHEVTIVLKMAMQNRRKWKGEILS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                  ++ +   E        A +  ++  A L+ +
Sbjct: 121 VEGETVTIKVDGNEE--------AFALSNIAKANLVPS 150


>gi|114321099|ref|YP_742782.1| hypothetical protein Mlg_1950 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227493|gb|ABI57292.1| protein of unknown function DUF150 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 176

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 10/163 (6%)

Query: 14  RIFGDMGLAGD-ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEE 71
            + G M    D + ++I P++  M +  V I         LL+I+++  DG +TL DCE 
Sbjct: 20  FVAGAMAATEDTLYALIDPLLTGMGYELVGIEYGGPAGKRLLRIYIDSPDG-ITLDDCET 78

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            S+ IS +LDVE+ I G Y LE+SSPG+DRP+ + SD+ R+ G  +   +      +++ 
Sbjct: 79  CSRQISAVLDVEDPIPGEYTLEISSPGLDRPIFKASDYDRFAGEQIKIRLSAPWEGRRRF 138

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G + G  + G  +        +    ++ I  D +  ARLI+
Sbjct: 139 KGVLAGLGDEGVRV-------VEAQGDEVQIPLDLIEKARLIL 174


>gi|317493624|ref|ZP_07952045.1| yhbC protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918567|gb|EFV39905.1| yhbC protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 152

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V I  +   +  L+I+++ D+G + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMISAPVEALGFELVGIEFIRSHHSTLRIYIDSDEG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     ++R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTADHYVRFMGEEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 120 KAVEGEMITVTVDGKDEV--------FALSNIQKANLV 149


>gi|238760243|ref|ZP_04621388.1| hypothetical protein yaldo0001_39490 [Yersinia aldovae ATCC 35236]
 gi|238701566|gb|EEP94138.1| hypothetical protein yaldo0001_39490 [Yersinia aldovae ATCC 35236]
          Length = 152

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGENVTLVLRMAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 120 KAVDGEMITVTVDGKDEV--------FALSNIQKANLV 149


>gi|323162864|gb|EFZ48699.1| hypothetical protein ECE128010_0824 [Escherichia coli E128010]
          Length = 150

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKCQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|297530566|ref|YP_003671841.1| hypothetical protein GC56T3_2294 [Geobacillus sp. C56-T3]
 gi|297253818|gb|ADI27264.1| protein of unknown function DUF150 [Geobacillus sp. C56-T3]
          Length = 157

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P+++EM    V I  ++E KN  L++F++ DDG + +  C  +S+ +S  
Sbjct: 5   VTETVEQLVTPILDEMGLELVDIEYVKEGKNWFLRVFIDSDDG-VDIEQCGAVSEKLSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++    
Sbjct: 64  LDEVDPIPYNYFLEVSSPGAERPLKKAKDFAKAIGKNVYIKTYEPIEGERQFEGELTAFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   L  + RG +      +AI ++ + SARL V
Sbjct: 124 GTTVTLLVKDRGRQK----TVAIPYEKVASARLAV 154


>gi|167401220|ref|ZP_02306720.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|259645220|sp|A7FMS4|RIMP_YERP3 RecName: Full=Ribosome maturation factor rimP
 gi|21957404|gb|AAM84274.1|AE013671_1 hypothetical protein y0686 [Yersinia pestis KIM 10]
 gi|45435296|gb|AAS60855.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|152961108|gb|ABS48569.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           31758]
 gi|167049245|gb|EDR60653.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
          Length = 154

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  
Sbjct: 3   VGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 62  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 122 KAVDGEMITVTVDGKDEV--------FALSNIQKANLV 151


>gi|282600045|ref|ZP_05972807.2| hypothetical protein PROVRUST_06459 [Providencia rustigianii DSM
           4541]
 gi|282566854|gb|EFB72389.1| hypothetical protein PROVRUST_06459 [Providencia rustigianii DSM
           4541]
          Length = 185

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + F  V +  +  +   L+IF++ ++G +T+ DC ++S  
Sbjct: 34  VGLSTLEQKLTEMVSAPVEALGFEFVGLEFVRGRTSTLRIFIDSEEG-ITVDDCADVSHQ 92

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG++RP+   + + R+ G  VA  + ++  ++++  G I
Sbjct: 93  VSAVLDVEDPISVIYNLEVSSPGMERPLFTIAHYERFMGEEVALTLRIAMQNRRRWQGII 152

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 153 KAVDGEMITVTVDGKDEV--------FALGNIQKANLV 182


>gi|292486835|ref|YP_003529705.1| hypothetical protein EAMY_0347 [Erwinia amylovora CFBP1430]
 gi|283476836|emb|CAY72674.1| UPF0090 protein yhbC [Erwinia pyrifoliae DSM 12163]
 gi|291552252|emb|CBA19289.1| UPF0090 protein yhbC [Erwinia amylovora CFBP1430]
 gi|312170903|emb|CBX79162.1| UPF0090 protein yhbC [Erwinia amylovora ATCC BAA-2158]
          Length = 150

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S ++
Sbjct: 4   LEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYDRFTGEEVSLVLRMAVQNRRKWQGIIKSVEG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E   E          +  ++  A L+
Sbjct: 123 EMITVAVEGNDEV--------FALSNIQKANLV 147


>gi|259585768|sp|A4WEY5|RIMP_ENT38 RecName: Full=Ribosome maturation factor rimP
 gi|145320118|gb|ABP62265.1| protein of unknown function DUF150 [Enterobacter sp. 638]
          Length = 160

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I+  +E + +  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 9   VGLSTLEQKLTEMIKAPVEALGYELVGIEFIRSRTSTLRIYIDSEDG-INVDDCADVSHQ 67

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+ RPM     +  + G  VA  + ++  +++K  G I
Sbjct: 68  VSAVLDVEDPITVAYNLEVSSPGLHRPMFTAEHYTHYIGEEVAVVLRMAVQNRRKWQGVI 127

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 128 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 157


>gi|89067478|ref|ZP_01154991.1| hypothetical protein OG2516_11576 [Oceanicola granulosus HTCC2516]
 gi|89047047|gb|EAR53101.1| hypothetical protein OG2516_11576 [Oceanicola granulosus HTCC2516]
          Length = 197

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +I PVI +M F +V++ L      +LQI  ++ DG + + +C E+S 
Sbjct: 4   LIAKTAMDRRITEIIDPVITDMGFETVRVRLQGGNTPVLQIMAQKPDGTIEVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF RW G+V   E       +++  G+
Sbjct: 64  AVSAVLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDRWQGYVAKLETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +E E+ GE     + I + FD L  A+L++TDEL+R  L        +
Sbjct: 124 LGGVEGGEVLIEIEENGE----PVTIGLQFDWLSDAKLVLTDELIREVLKTRKDAGQI 177


>gi|290454910|emb|CBJ57168.1| YhbC-like protein [Pectobacterium carotovorum]
          Length = 152

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +L
Sbjct: 6   LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I     
Sbjct: 65  DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVIKAVDG 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 125 EMITITVEGKDEV--------FALSNIQKANLV 149


>gi|91208369|sp|Q6D9A7|RIMP_ERWCT RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +L
Sbjct: 6   LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  VA  + ++  +++K +G I     
Sbjct: 65  DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVAVVLRMAVQNRRKWLGVIKAVDG 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 125 EMITITVEGKDEV--------FALSNIQKANLV 149


>gi|212709947|ref|ZP_03318075.1| hypothetical protein PROVALCAL_00997 [Providencia alcalifaciens DSM
           30120]
 gi|212687459|gb|EEB46987.1| hypothetical protein PROVALCAL_00997 [Providencia alcalifaciens DSM
           30120]
          Length = 183

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 79/158 (50%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + F  V +  +  +   L+IF++ ++G +T+ DC ++S  
Sbjct: 32  VGLSTLEQKLTEMVSAPVEALGFEFVGLEFVRGRTSTLRIFIDSEEG-ITVDDCADVSHQ 90

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LE+SSPG++RP+   + + R+ G  VA  + ++  ++++  G I
Sbjct: 91  VSAVLDVEDPISVIYNLEISSPGMERPLFTIAHYERFMGEEVALSLRIAMQNRRRWQGII 150

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 151 KAVDGEMITVTVDGKDEV--------FALGNIQKANLV 180


>gi|153997275|ref|ZP_02022375.1| hypothetical protein YPE_3717 [Yersinia pestis CA88-4125]
 gi|229839150|ref|ZP_04459309.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229896639|ref|ZP_04511806.1| conserved protein [Yersinia pestis Pestoides A]
 gi|229899714|ref|ZP_04514855.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229903876|ref|ZP_04518989.1| conserved protein [Yersinia pestis Nepal516]
 gi|238787592|ref|ZP_04631390.1| hypothetical protein yfred0001_21120 [Yersinia frederiksenii ATCC
           33641]
 gi|238793020|ref|ZP_04636649.1| hypothetical protein yinte0001_33150 [Yersinia intermedia ATCC
           29909]
 gi|34223130|sp|Q8ZBC0|RIMP_YERPE RecName: Full=Ribosome maturation factor rimP
 gi|81640534|sp|Q66F62|RIMP_YERPS RecName: Full=Ribosome maturation factor rimP
 gi|51588112|emb|CAH19718.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|115349123|emb|CAL22086.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149288912|gb|EDM38992.1| hypothetical protein YPE_3717 [Yersinia pestis CA88-4125]
 gi|229679646|gb|EEO75749.1| conserved protein [Yersinia pestis Nepal516]
 gi|229687206|gb|EEO79281.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229695516|gb|EEO85563.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700417|gb|EEO88449.1| conserved protein [Yersinia pestis Pestoides A]
 gi|238724379|gb|EEQ16021.1| hypothetical protein yfred0001_21120 [Yersinia frederiksenii ATCC
           33641]
 gi|238727620|gb|EEQ19145.1| hypothetical protein yinte0001_33150 [Yersinia intermedia ATCC
           29909]
 gi|320013701|gb|ADV97272.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 152

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 120 KAVDGEMITVTVDGKDEV--------FALSNIQKANLV 149


>gi|228954093|ref|ZP_04116122.1| hypothetical protein bthur0006_34650 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229191986|ref|ZP_04318956.1| hypothetical protein bcere0002_36430 [Bacillus cereus ATCC 10876]
 gi|228591537|gb|EEK49386.1| hypothetical protein bcere0002_36430 [Bacillus cereus ATCC 10876]
 gi|228805659|gb|EEM52249.1| hypothetical protein bthur0006_34650 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 174

 Score =  184 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 16  RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 74

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 75  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 134

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I IS D + +ARL VT
Sbjct: 135 GKLLSYDGTTITLLLTIKTRKK----EIQISMDKVANARLAVT 173


>gi|260596200|ref|YP_003208771.1| ribosome maturation protein RimP [Cronobacter turicensis z3032]
 gi|260215377|emb|CBA27399.1| UPF0090 protein yhbC [Cronobacter turicensis z3032]
          Length = 150

 Score =  184 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-ITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ +   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPVTVAYNLEVSSPGLDRPLFTAEHYARYTGEEVTLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  + + E          +  ++  A L+
Sbjct: 123 EMITVAVDGKDEV--------FALSNIQRANLV 147


>gi|262393380|ref|YP_003285234.1| hypothetical protein VEA_002607 [Vibrio sp. Ex25]
 gi|262336974|gb|ACY50769.1| UPF0090 domain-containing protein [Vibrio sp. Ex25]
          Length = 151

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E   +  V +  +    +  L+I+++ ++G + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEASGYELVGLEFIRAGAHSTLRIYIDHENG-INVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 VDGETVTITVDGQQE--------EFALSNISKANLI 148


>gi|108806046|ref|YP_649962.1| hypothetical protein YPA_0048 [Yersinia pestis Antiqua]
 gi|108813402|ref|YP_649169.1| hypothetical protein YPN_3242 [Yersinia pestis Nepal516]
 gi|145600794|ref|YP_001164870.1| hypothetical protein YPDSF_3547 [Yersinia pestis Pestoides F]
 gi|161484876|ref|NP_668023.2| hypothetical protein y0686 [Yersinia pestis KIM 10]
 gi|161511440|ref|NP_991978.2| hypothetical protein YP_0585 [Yersinia pestis biovar Microtus str.
           91001]
 gi|161760591|ref|YP_069021.2| hypothetical protein YPTB0478 [Yersinia pseudotuberculosis IP
           32953]
 gi|162419022|ref|YP_001608284.1| hypothetical protein YpAngola_A3991 [Yersinia pestis Angola]
 gi|166010175|ref|ZP_02231073.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|167420580|ref|ZP_02312333.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423588|ref|ZP_02315341.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170025947|ref|YP_001722452.1| hypothetical protein YPK_3732 [Yersinia pseudotuberculosis YPIII]
 gi|186893839|ref|YP_001870951.1| hypothetical protein YPTS_0508 [Yersinia pseudotuberculosis PB1/+]
 gi|218930512|ref|YP_002348387.1| hypothetical protein YPO3498 [Yersinia pestis CO92]
 gi|229294897|ref|YP_001402552.2| hypothetical protein YpsIP31758_3598 [Yersinia pseudotuberculosis
           IP 31758]
 gi|270489134|ref|ZP_06206208.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294505369|ref|YP_003569431.1| hypothetical protein YPZ3_3260 [Yersinia pestis Z176003]
 gi|122383879|sp|Q1CC05|RIMP_YERPA RecName: Full=Ribosome maturation factor rimP
 gi|122384216|sp|Q1CEL1|RIMP_YERPN RecName: Full=Ribosome maturation factor rimP
 gi|259511439|sp|A4TRI5|RIMP_YERPP RecName: Full=Ribosome maturation factor rimP
 gi|259511440|sp|B1JLY2|RIMP_YERPY RecName: Full=Ribosome maturation factor rimP
 gi|259645221|sp|B2K2Q3|RIMP_YERPB RecName: Full=Ribosome maturation factor rimP
 gi|259645222|sp|A9R5A1|RIMP_YERPG RecName: Full=Ribosome maturation factor rimP
 gi|108777050|gb|ABG19569.1| hypothetical protein YPN_3242 [Yersinia pestis Nepal516]
 gi|108777959|gb|ABG12017.1| hypothetical protein YPA_0048 [Yersinia pestis Antiqua]
 gi|145212490|gb|ABP41897.1| hypothetical protein YPDSF_3547 [Yersinia pestis Pestoides F]
 gi|162351837|gb|ABX85785.1| conserved hypothetical protein [Yersinia pestis Angola]
 gi|165991082|gb|EDR43383.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166961386|gb|EDR57407.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167057758|gb|EDR67504.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169752481|gb|ACA69999.1| protein of unknown function DUF150 [Yersinia pseudotuberculosis
           YPIII]
 gi|186696865|gb|ACC87494.1| protein of unknown function DUF150 [Yersinia pseudotuberculosis
           PB1/+]
 gi|262363435|gb|ACY60156.1| hypothetical protein YPD4_3252 [Yersinia pestis D106004]
 gi|262367190|gb|ACY63747.1| hypothetical protein YPD8_3075 [Yersinia pestis D182038]
 gi|270337638|gb|EFA48415.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294355828|gb|ADE66169.1| hypothetical protein YPZ3_3260 [Yersinia pestis Z176003]
          Length = 150

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  +S +L
Sbjct: 4   LEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  + + E          +  ++  A L+
Sbjct: 123 EMITVTVDGKDEV--------FALSNIQKANLV 147


>gi|28899232|ref|NP_798837.1| hypothetical protein VP2458 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838301|ref|ZP_01990968.1| protein YhbC [Vibrio parahaemolyticus AQ3810]
 gi|260362205|ref|ZP_05775189.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|260879073|ref|ZP_05891428.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|260897744|ref|ZP_05906240.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|260900800|ref|ZP_05909195.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|34223108|sp|Q87M00|RIMP_VIBPA RecName: Full=Ribosome maturation factor rimP
 gi|28807456|dbj|BAC60721.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748290|gb|EDM59149.1| protein YhbC [Vibrio parahaemolyticus AQ3810]
 gi|308088965|gb|EFO38660.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|308089555|gb|EFO39250.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|308108208|gb|EFO45748.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|308111471|gb|EFO49011.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|328474232|gb|EGF45037.1| ribosome maturation protein RimP [Vibrio parahaemolyticus 10329]
          Length = 151

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E   +  V +  +    +  L+I+++ ++G + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEASGYELVGLEFIRAGAHSTLRIYIDHENG-INVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  E + E          +  ++  A LI
Sbjct: 121 VDGETVTVTVEGQQE--------EFALSNISKANLI 148


>gi|259586205|sp|Q2NW25|RIMP_SODGM RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I++  D+G +T+ DC ++S  +S +L
Sbjct: 6   LEQKLTEMITAPVEALGFELVGIEFIRGRQSTLRIYINSDEG-ITVDDCADVSHQVSAVL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+   + + ++ G  V+  + ++  +++K  G I     
Sbjct: 65  DVEDPISVAYSLEVSSPGLDRPLFTAAHYRQFIGSDVSVVLRIAVQNRRKWQGIIKAVDG 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  + + E          +  ++  A L+
Sbjct: 125 EMITVTVDGKDEV--------FALQNIQKANLV 149


>gi|330447379|ref|ZP_08311028.1| ribosome maturation protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491570|dbj|GAA05525.1| ribosome maturation protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 151

 Score =  184 bits (468), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++P +  + +  V +  +    +  L++F++ ++G + + DC E+S+ IS
Sbjct: 2   TALETQLTEMLEPSVLALGYELVGLEFIRAGEHSTLRVFIDHENG-INVDDCAEVSRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH  +  + ++ G+++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFVGHEASIVLKMAMGNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  L  +   E        + +  ++  A L+
Sbjct: 121 VDGELITLNVDGNEE--------SFALSNISKANLV 148


>gi|238755154|ref|ZP_04616500.1| hypothetical protein yruck0001_25670 [Yersinia ruckeri ATCC 29473]
 gi|238706601|gb|EEP98972.1| hypothetical protein yruck0001_25670 [Yersinia ruckeri ATCC 29473]
          Length = 152

 Score =  184 bits (468), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +DG +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYARYLGETVILVLRMAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 120 KAVDGEMITVTVDGKDEV--------FALSNIQKANLV 149


>gi|162382799|ref|YP_454055.2| hypothetical protein SG0375 [Sodalis glossinidius str. 'morsitans']
          Length = 150

 Score =  184 bits (468), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I++  D+G +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGRQSTLRIYINSDEG-ITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+   + + ++ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPISVAYSLEVSSPGLDRPLFTAAHYRQFIGSDVSVVLRIAVQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  + + E          +  ++  A L+
Sbjct: 123 EMITVTVDGKDEV--------FALQNIQKANLV 147


>gi|238750124|ref|ZP_04611627.1| hypothetical protein yrohd0001_7050 [Yersinia rohdei ATCC 43380]
 gi|238761766|ref|ZP_04622740.1| hypothetical protein ykris0001_12910 [Yersinia kristensenii ATCC
           33638]
 gi|332160077|ref|YP_004296654.1| hypothetical protein YE105_C0453 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|167012934|sp|A1JIW7|RIMP_YERE8 RecName: Full=Ribosome maturation factor rimP
 gi|122087772|emb|CAL10558.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238699880|gb|EEP92623.1| hypothetical protein ykris0001_12910 [Yersinia kristensenii ATCC
           33638]
 gi|238711668|gb|EEQ03883.1| hypothetical protein yrohd0001_7050 [Yersinia rohdei ATCC 43380]
 gi|325664307|gb|ADZ40951.1| hypothetical protein YE105_C0453 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 152

 Score =  184 bits (468), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG++RPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLERPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 120 KAVDGEMITVTVDGKDEV--------FALSNIQKANLV 149


>gi|260893512|ref|YP_003239609.1| protein of unknown function DUF150 [Ammonifex degensii KC4]
 gi|260865653|gb|ACX52759.1| protein of unknown function DUF150 [Ammonifex degensii KC4]
          Length = 161

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +S + +P+ E +    V +   +E    +L++F+++  G +TL DCE LS+A+   
Sbjct: 7   VVEVVSRLAEPLAERLGLELVDVEYKKEGGRWVLRVFIDKPSG-VTLDDCEALSEALGEA 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP+ + + F R+ G  V    +     +++  G ++   
Sbjct: 66  LDVEDPIPHSYSLEVSSPGVERPLKKPAHFQRFVGREVRVSTLAPVEGQRRFTGVLLAAD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           E G  LE + +        ++ + +  +  A L+
Sbjct: 126 EEGIRLETDGK--------ELDLPYRLIAKANLV 151


>gi|291327116|ref|ZP_06127048.2| hypothetical protein PROVRETT_09231 [Providencia rettgeri DSM 1131]
 gi|291311612|gb|EFE52065.1| hypothetical protein PROVRETT_09231 [Providencia rettgeri DSM 1131]
          Length = 171

 Score =  184 bits (467), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V +  +  +   L++F++ ++G +T+ DC ++S  
Sbjct: 20  VGLSTLEQKLTEMISAPVEALGFEFVGLEFVRGRTSTLRVFIDSEEG-ITVDDCADVSHQ 78

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LE+SSPG++RP+   + + R+ G  VA  + ++  +++K  G I
Sbjct: 79  VSAVLDVEDPISVIYNLEISSPGLERPLFTIAHYERFMGEEVALTLRIAMQNRRKWQGII 138

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 139 KAIDGEMITVTVDGKDEV--------FALGNIQKANLV 168


>gi|270265057|ref|ZP_06193320.1| putative cytoplasmic protein [Serratia odorifera 4Rx13]
 gi|270040991|gb|EFA14092.1| putative cytoplasmic protein [Serratia odorifera 4Rx13]
          Length = 150

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEEPITVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGIIKSVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|134299808|ref|YP_001113304.1| hypothetical protein Dred_1961 [Desulfotomaculum reducens MI-1]
 gi|259585752|sp|A4J5X6|RIMP_DESRM RecName: Full=Ribosome maturation factor rimP
 gi|134052508|gb|ABO50479.1| protein of unknown function DUF150 [Desulfotomaculum reducens MI-1]
          Length = 153

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++  + P++EE     V +  ++E  N  L+IF+++  G + L DC+ +S+ I  +
Sbjct: 6   VVEKVTEAVAPIVEEAKLELVDVEYVKEGGNWYLRIFIDKP-GGIELDDCQGVSEKIDTL 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + +   Y LEVSSPGI+RP+ +  DF ++NGH+V           +  IGK++  +
Sbjct: 65  LDEIDPVPQAYFLEVSSPGIERPLKKPQDFEKFNGHLVNITTFAPINGSKNFIGKLLDYN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E G  LE + +        Q+ +    + +ARL V
Sbjct: 125 EEGIHLEIKGK--------QVVLPHQQVATARLAV 151


>gi|118479037|ref|YP_896188.1| hypothetical protein BALH_3445 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118418262|gb|ABK86681.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 174

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 16  RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 74

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 75  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 134

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 135 GKMLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 173


>gi|229576801|ref|YP_001004802.2| hypothetical protein YE0432 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318607363|emb|CBY28861.1| clustered with transcription termination protein NusA [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|330862030|emb|CBX72197.1| UPF0090 protein YE0432 [Yersinia enterocolitica W22703]
          Length = 150

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ DDG +T+  C ++S  +S +L
Sbjct: 4   LEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RPM     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLERPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  + + E          +  ++  A L+
Sbjct: 123 EMITVTVDGKDEV--------FALSNIQKANLV 147


>gi|258516335|ref|YP_003192557.1| hypothetical protein Dtox_3192 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780040|gb|ACV63934.1| protein of unknown function DUF150 [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 153

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 10/160 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQ 74
                LA  +  ++ PV+EEM+   V +  ++E     L+IF+++  G + + DC+ +SQ
Sbjct: 1   MAKNKLADIVEGLVAPVVEEMAMELVDVEYVKEGSQWYLRIFIDK-TGGIFVDDCQAVSQ 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ++D ++ I   Y LEVSSPG+DRP+ + +D+ R+ G+ V          K+   G+
Sbjct: 60  KVSRLMDEKDPIPHAYILEVSSPGLDRPLKKAADYERFCGYEVVVTTYAPFNGKKSFSGR 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G SE G  +  +          +  I  D + SARL V
Sbjct: 120 LDGLSEQGVIINVDG--------TEYVIPVDQVASARLAV 151


>gi|83589894|ref|YP_429903.1| hypothetical protein Moth_1046 [Moorella thermoacetica ATCC 39073]
 gi|91207996|sp|Q2RJM9|RIMP_MOOTA RecName: Full=Ribosome maturation factor rimP
 gi|83572808|gb|ABC19360.1| Protein of unknown function DUF150 [Moorella thermoacetica ATCC
           39073]
          Length = 158

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +++P++  M +  V +    E     L++F++R +G + L DCE++S+ +S +
Sbjct: 4   LTALIQELVEPLLTPMGYELVDLQYGREGGRYILRLFIDRPEG-IGLDDCEQVSRVVSAL 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I   Y LEVSSPG++RP+ +++DF R+ G  V          ++   G+++G  
Sbjct: 63  LDEKDPIPHSYYLEVSSPGLERPLKKEADFNRFAGRKVKLRTFAPINGQRHFQGRLLGYQ 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    +  E+          +AI  + + +ARL+
Sbjct: 123 DGQVRMHLEE-------GWDLAIPLEQVATARLV 149


>gi|163796765|ref|ZP_02190723.1| hypothetical protein BAL199_13523 [alpha proteobacterium BAL199]
 gi|159178019|gb|EDP62566.1| hypothetical protein BAL199_13523 [alpha proteobacterium BAL199]
          Length = 179

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 7/170 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPIL 80
           A  I S+I P IE M +  V++ +   +   LQI  ER DG  M + DC E+S++IS IL
Sbjct: 11  ARRIESIIGPSIEAMGYALVRVMITGGRRPTLQIMAERADGSGMNVDDCAEISRSISAIL 70

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I G Y LEVSSPGIDRP+ R  DF R+ G     ++      +++  G+++G  +
Sbjct: 71  DVEDPITGEYTLEVSSPGIDRPLTRLDDFRRFAGFEARIDMAELIEGRKRFGGRLIGVDD 130

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
               L +   G ++      A+ F+ +  A+L++TDEL+ AS       A
Sbjct: 131 ADRVLLETAPGVRE------ALPFEGIARAKLVLTDELVAASAPAGREGA 174


>gi|304396346|ref|ZP_07378227.1| protein of unknown function DUF150 [Pantoea sp. aB]
 gi|304355855|gb|EFM20221.1| protein of unknown function DUF150 [Pantoea sp. aB]
          Length = 143

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + +  V I  +  +  +L+I+++ +DG + + DC ++S  +S ++DVE+
Sbjct: 1   MTELVSAPVEALGYELVGIEFVRSRTSILRIYIDSEDG-INVDDCADVSHQVSAVMDVED 59

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I         
Sbjct: 60  PITVPYNLEVSSPGLDRPLFTAEHYTRFMGEEVSLVLRMAVQNRRKWQGTIKSVDGEMIT 119

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +  E   E          +  ++  A L+
Sbjct: 120 VHVEGSDEV--------FALSNIQKANLV 140


>gi|188586066|ref|YP_001917611.1| protein of unknown function DUF150 [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|226734162|sp|B2A393|RIMP_NATTJ RecName: Full=Ribosome maturation factor rimP
 gi|179350753|gb|ACB85023.1| protein of unknown function DUF150 [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 154

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 9/154 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              I ++I+P + ++ +  V + L +E +  +L+++++   G + L DCE +S ++  +L
Sbjct: 7   ISQIENIIEPAVRDLGYDLVDVELIMENQKWVLRVYIDHGKG-IGLDDCELVSNSLDQLL 65

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  + I   Y LEVSSPG +RP+ +K DF+ + G  V  +  +    ++   GK++G  +
Sbjct: 66  DEHDPIPHSYVLEVSSPGAERPLKKKKDFVNFAGKKVQIKTYVKLDGRKNFKGKLLGLED 125

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               LE         N  ++ I  D +  A L++
Sbjct: 126 EHVVLET-------FNSGEVKIPLDKIAKANLLL 152


>gi|254490571|ref|ZP_05103757.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
 gi|224464315|gb|EEF80578.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
          Length = 148

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   +  +I+  IE + +  V +  ++   + +L+I+++ + G + + DCE++S  IS
Sbjct: 1   MAITDQVEQLIEAPIESLGYELVGVEYIQGGPDAILRIYIDAEQG-IGIEDCEKVSHQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE  I   Y LEVSSPG DRP+ +  DF R+ G  V   + L    ++   G + G
Sbjct: 60  GVLDVEEPIRSAYMLEVSSPGFDRPLFKARDFERFAGAEVKISMKLPVQGRRNFTGVLQG 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            S+    +E +            A+    L  ARL+
Sbjct: 120 FSDGEVLIEVDGEIY--------ALPLAKLAKARLV 147


>gi|65321144|ref|ZP_00394103.1| COG0779: Uncharacterized protein conserved in bacteria [Bacillus
           anthracis str. A2012]
          Length = 174

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 16  RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 74

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 75  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 134

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 135 GKMLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 173


>gi|254496139|ref|ZP_05109037.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254354626|gb|EET13263.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 147

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++  ++ P I +M +       L + K+ LL+I++++ DG + + DC+++S  +S +
Sbjct: 2   IQDELEQLLAPTINDMGYELWGCEYLSQGKHSLLRIYIDKADG-IGIEDCQDVSHQVSAL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I G+Y LEVSSPGI RP+     + R+ G  V  +      +K+KL+G I+  S
Sbjct: 61  LDVEDPIPGNYSLEVSSPGIPRPLFYSWQYQRYIGQSVQIKTFKPVNNKRKLLGTIVSAS 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    L         +N     + F +++ A L V
Sbjct: 121 ENSVVLN--------INGEDHELLFSNIVKAYLTV 147


>gi|90581551|ref|ZP_01237344.1| hypothetical protein VAS14_07344 [Vibrio angustum S14]
 gi|90437313|gb|EAS62511.1| hypothetical protein VAS14_07344 [Vibrio angustum S14]
          Length = 151

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++P +  + +  V +  +    +  L++F++ ++G + + DC E+S+ IS
Sbjct: 2   TALETQLTEMLEPSVLALGYELVGLEFIRAGEHSTLRVFIDHENG-INVDDCAEVSRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH     + ++ G+++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEANIVLKMAMGNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  L+ +   E        + +  ++  A L+
Sbjct: 121 VEGELITLKVDGNEE--------SFALSNISKANLV 148


>gi|229086369|ref|ZP_04218546.1| hypothetical protein bcere0022_29560 [Bacillus cereus Rock3-44]
 gi|228696981|gb|EEL49789.1| hypothetical protein bcere0022_29560 [Bacillus cereus Rock3-44]
          Length = 164

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E K+  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|332290218|ref|YP_004421070.1| hypothetical protein UMN179_02160 [Gallibacterium anatis UMN179]
 gi|330433114|gb|AEC18173.1| hypothetical protein UMN179_02160 [Gallibacterium anatis UMN179]
          Length = 153

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++QP +E+M F  + I          +++++++++G +T+ DC ++S+ +  I
Sbjct: 4   LEQKLQDLLQPTVEDMGFELLGIECTRAGRYSTVRLYIDKENG-VTIDDCSDVSREVGAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  V   + ++   ++K  G ++   
Sbjct: 63  LDVEDPISDKYNLEVSSPGLDRPLFTLAHYQRFVGEEVVIHLRIAMSGRRKWQGDLIKVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  E +        +   +F ++  A ++
Sbjct: 123 GDMITLNVEGQ--------EQVFAFSNIQKANIV 148


>gi|229577503|ref|YP_001178316.2| hypothetical protein Ent638_3607 [Enterobacter sp. 638]
          Length = 150

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I+  +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMIKAPVEALGYELVGIEFIRSRTSTLRIYIDSEDG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+ RPM     +  + G  VA  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLHRPMFTAEHYTHYIGEEVAVVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLV 147


>gi|114571579|ref|YP_758259.1| hypothetical protein Mmar10_3040 [Maricaulis maris MCS10]
 gi|122314890|sp|Q0AK72|RIMP_MARMM RecName: Full=Ribosome maturation factor rimP
 gi|114342041|gb|ABI67321.1| protein of unknown function DUF150 [Maricaulis maris MCS10]
          Length = 178

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 7/171 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPIL 80
              I ++ +PV  E++   V++ ++  K   LQI  +R +G  + + DC   S+A+S + 
Sbjct: 8   DDRILALAEPVAAELALEVVRVRIMSGKRPRLQIMADRTNGTGIEVEDCARFSRALSEVF 67

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VE+ + G Y LEVSSPGIDRP+     F RW G+ V  E+   +  +++  G + G  +
Sbjct: 68  EVEDPVAGEYDLEVSSPGIDRPLTTLPHFERWEGNEVKIELDRLAEGRKRFRGILAGVED 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
               L+ +   +  M      I FD ++ A+L++TD L+ A L   G  A 
Sbjct: 128 GHVGLDMDGEDDTTM------IPFDWIVEAKLVLTDALIEADLKARGRGAA 172


>gi|188026374|ref|ZP_02961857.2| hypothetical protein PROSTU_03929 [Providencia stuartii ATCC 25827]
 gi|188020155|gb|EDU58195.1| hypothetical protein PROSTU_03929 [Providencia stuartii ATCC 25827]
          Length = 171

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 79/158 (50%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V +  +  +   L++F++ ++G +T+ DC ++S  
Sbjct: 20  VGLSTLEQKLTEMISAPVEALGFEFVGLEFVRARTSTLRVFIDSEEG-ITVDDCADVSHQ 78

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LE+SSPG++RP+   + + R+ G  VA  + ++  ++++  G I
Sbjct: 79  VSAVLDVEDPISVVYNLEISSPGLERPLFTVAHYERFVGEEVALTLRIAMQNRRRWQGII 138

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 139 KAVEGEMITVTVDGKDEV--------FALGNIQKANLV 168


>gi|238896677|ref|YP_002921422.1| hypothetical protein KP1_4889 [Klebsiella pneumoniae NTUH-K2044]
 gi|238549004|dbj|BAH65355.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 154

 Score =  182 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  
Sbjct: 3   VGLSTLEQKLTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSS G+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 62  VSAVMDVEDPITVAYNLEVSSLGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGII 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 122 KAVDGEMITVTVEGKDEV--------FALSNIQKANLV 151


>gi|317129166|ref|YP_004095448.1| hypothetical protein Bcell_2460 [Bacillus cellulosilyticus DSM
           2522]
 gi|315474114|gb|ADU30717.1| protein of unknown function DUF150 [Bacillus cellulosilyticus DSM
           2522]
          Length = 154

 Score =  182 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 82/157 (52%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +  ++  +++P++++MS   V I   +E KN  L+++++R DG + L DC  +S+ +S
Sbjct: 1   MSIREEVEVLVEPILQQMSLELVDIEYKKEGKNWFLRVYIDR-DGGVDLDDCTAVSEQLS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I+  Y LEVSSPG +RP+  + D +R  G  +          ++   GK+M 
Sbjct: 60  EALDKHDPIDQMYYLEVSSPGAERPLKTEQDIVRAVGKYINVTTYAPIDGEKVFEGKLMH 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++    +E + +         + + +D +  ARL +
Sbjct: 120 FNDGILSMETKVKTRVK----TVELPYDKIAKARLAI 152


>gi|228902320|ref|ZP_04066477.1| hypothetical protein bthur0014_34980 [Bacillus thuringiensis IBL
           4222]
 gi|228909641|ref|ZP_04073464.1| hypothetical protein bthur0013_37930 [Bacillus thuringiensis IBL
           200]
 gi|228940905|ref|ZP_04103464.1| hypothetical protein bthur0008_35450 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228966762|ref|ZP_04127806.1| hypothetical protein bthur0004_35680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228973834|ref|ZP_04134410.1| hypothetical protein bthur0003_35890 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980423|ref|ZP_04140733.1| hypothetical protein bthur0002_35910 [Bacillus thuringiensis Bt407]
 gi|229098286|ref|ZP_04229233.1| hypothetical protein bcere0020_35200 [Bacillus cereus Rock3-29]
 gi|229104379|ref|ZP_04235048.1| hypothetical protein bcere0019_35270 [Bacillus cereus Rock3-28]
 gi|229117303|ref|ZP_04246681.1| hypothetical protein bcere0017_35830 [Bacillus cereus Rock1-3]
 gi|229162753|ref|ZP_04290710.1| hypothetical protein bcere0009_35230 [Bacillus cereus R309803]
 gi|228620635|gb|EEK77504.1| hypothetical protein bcere0009_35230 [Bacillus cereus R309803]
 gi|228666203|gb|EEL21667.1| hypothetical protein bcere0017_35830 [Bacillus cereus Rock1-3]
 gi|228679077|gb|EEL33285.1| hypothetical protein bcere0019_35270 [Bacillus cereus Rock3-28]
 gi|228685184|gb|EEL39115.1| hypothetical protein bcere0020_35200 [Bacillus cereus Rock3-29]
 gi|228779243|gb|EEM27500.1| hypothetical protein bthur0002_35910 [Bacillus thuringiensis Bt407]
 gi|228785859|gb|EEM33862.1| hypothetical protein bthur0003_35890 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228792861|gb|EEM40419.1| hypothetical protein bthur0004_35680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228818741|gb|EEM64807.1| hypothetical protein bthur0008_35450 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228849930|gb|EEM94761.1| hypothetical protein bthur0013_37930 [Bacillus thuringiensis IBL
           200]
 gi|228857289|gb|EEN01792.1| hypothetical protein bthur0014_34980 [Bacillus thuringiensis IBL
           4222]
          Length = 164

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|229174483|ref|ZP_04302015.1| hypothetical protein bcere0006_35760 [Bacillus cereus MM3]
 gi|228609043|gb|EEK66333.1| hypothetical protein bcere0006_35760 [Bacillus cereus MM3]
          Length = 164

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|154686076|ref|YP_001421237.1| hypothetical protein RBAM_016430 [Bacillus amyloliquefaciens FZB42]
 gi|189038972|sp|A7Z4T0|RIMP_BACA2 RecName: Full=Ribosome maturation factor rimP
 gi|154351927|gb|ABS74006.1| YlxS [Bacillus amyloliquefaciens FZB42]
          Length = 156

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 82/156 (52%), Gaps = 6/156 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + QP+++++    V I  ++E  N  L++F++ ++G + + +C ++S+A+S  
Sbjct: 5   VTDTVQEMAQPILDDLQLELVDIEFVKEGQNWFLRVFIDSENG-VDIEECAKVSEALSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +        +   GK+    
Sbjct: 64  LDEADPITQNYFLEVSSPGAERPLKKKADFEKSLGKNVYMKTYEPIDGLKVFEGKLAEFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E   +  K     ++ I ++ + +ARL VT
Sbjct: 124 GQTVTIEMTVKTRKK----RVNIPYEKIANARLAVT 155


>gi|228992545|ref|ZP_04152472.1| hypothetical protein bpmyx0001_32850 [Bacillus pseudomycoides DSM
           12442]
 gi|228998593|ref|ZP_04158180.1| hypothetical protein bmyco0003_31540 [Bacillus mycoides Rock3-17]
 gi|229006093|ref|ZP_04163781.1| hypothetical protein bmyco0002_30140 [Bacillus mycoides Rock1-4]
 gi|228755169|gb|EEM04526.1| hypothetical protein bmyco0002_30140 [Bacillus mycoides Rock1-4]
 gi|228761061|gb|EEM10020.1| hypothetical protein bmyco0003_31540 [Bacillus mycoides Rock3-17]
 gi|228767179|gb|EEM15815.1| hypothetical protein bpmyx0001_32850 [Bacillus pseudomycoides DSM
           12442]
          Length = 164

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCE 70
           E R+F D  +   + ++ QP++EE++   V +  ++E K+  L++ ++ + G + + +C 
Sbjct: 4   ERRLFMDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVSIDSETG-VDIEECG 62

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++ 
Sbjct: 63  AVSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKM 122

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 123 FEGKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|229544432|ref|ZP_04433490.1| protein of unknown function DUF150 [Bacillus coagulans 36D1]
 gi|229324917|gb|EEN90594.1| protein of unknown function DUF150 [Bacillus coagulans 36D1]
          Length = 155

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +  PV+E +    V I  ++E KN  L++++++++G + + +C  +S+ +   
Sbjct: 4   VVEVVEQLASPVVEGLGLELVDIEYVKEGKNWFLRVYIDKENG-VDIEECGLVSERLGEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ +  DF R  G  V  +       ++   GK++   
Sbjct: 63  LDEVDPIPHNYFLEVSSPGAERPLKKARDFERAVGRTVLVKTYEPLDGEKTFQGKLIAFH 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                LE + + +K    ++  I +D + +ARL V
Sbjct: 123 NGCLTLECKVKTKK----IEKEIPYDKVANARLAV 153


>gi|269966858|ref|ZP_06180931.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269828525|gb|EEZ82786.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 151

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ ++   +    +  V +  +    +  L+I+++ ++G + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLDAPVAASGYELVGLEFIRAGAHSTLRIYIDHENG-INVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 VDGETVTITVDGQQE--------EFALSNISKANLI 148


>gi|83945004|ref|ZP_00957370.1| hypothetical protein OA2633_10254 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851786|gb|EAP89641.1| hypothetical protein OA2633_10254 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 178

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 6/170 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              I  + +P+ E +    V++ ++  K   +QI  ER DG M + DC  LS+A+S + D
Sbjct: 8   DKRILEIAEPLAETLGLEIVRVRVMGGKKTTVQIMAERHDGTMVVEDCARLSRALSEVFD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + + G Y LEVSSPGIDRP+   S F RW G     E+     ++++  G + G  + 
Sbjct: 68  EADPVSGEYDLEVSSPGIDRPLTALSHFERWEGFEAKIELDRLVENRKRFRGMLAGIEDD 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
              ++          +    I F+ +  A+L++TD L+ ASL   G   G
Sbjct: 128 NVLMDLAGE------DDTAVIPFEWIADAKLVMTDALVEASLKARGPIEG 171


>gi|303249648|ref|ZP_07335853.1| hypothetical protein APP6_1055 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303253713|ref|ZP_07339850.1| hypothetical protein APP2_0900 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247607|ref|ZP_07529650.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307252188|ref|ZP_07534086.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256658|ref|ZP_07538437.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302647438|gb|EFL77657.1| hypothetical protein APP2_0900 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302651460|gb|EFL81611.1| hypothetical protein APP6_1055 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306855877|gb|EFM88037.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860332|gb|EFM92347.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306864706|gb|EFM96610.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 153

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE M    V I        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEELVSDTIESMGCELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLKHYQRFIGQEVVIHLRIPMFDRRKWQGKLESVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +    +         +F ++  A L+
Sbjct: 123 GDLITLTVDNETRQ--------FAFGNIQKANLV 148


>gi|239826653|ref|YP_002949277.1| hypothetical protein GWCH70_1151 [Geobacillus sp. WCH70]
 gi|259585779|sp|C5D9C5|RIMP_GEOSW RecName: Full=Ribosome maturation factor rimP
 gi|239806946|gb|ACS24011.1| protein of unknown function DUF150 [Geobacillus sp. WCH70]
          Length = 157

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++ +M    V I  ++E KN  L++F++ D+G + +  C  +S+ +S  LD  
Sbjct: 9   VEELVTPILADMDLELVDIEYVKEGKNWFLRVFIDSDNG-VDIEQCGMVSEKLSEKLDEV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G+++G   T  
Sbjct: 68  DPIPHNYFLEVSSPGAERPLKKPKDFTKAIGKNVYIKTYEPIEGEKEFEGELIGFDGTTV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +  + +  K      I I ++ + SARL V
Sbjct: 128 SVTVKDKTRKK----TIDIPYEKVASARLAV 154


>gi|259586207|sp|A8G905|RIMP_SERP5 RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEEPITVAYNLEVSSPGLDRPMFTAEHYTRFLGDEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  E + E          +  ++  A L+
Sbjct: 120 KSVDGEMITVAVEGKDEV--------FALSNIQKANLV 149


>gi|192362188|ref|YP_001980957.1| BCR family protein [Cellvibrio japonicus Ueda107]
 gi|190688353|gb|ACE86031.1| Uncharacterized BCR, YhbC family [Cellvibrio japonicus Ueda107]
          Length = 196

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 11/161 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++ +I PV+E +      +  L +     L+IF++   G ++L DCE +S+ IS +LD
Sbjct: 38  ERLTDLIVPVVESLGCELWGLEYLTQGRYTTLRIFIDGPQG-VSLDDCERVSRQISAVLD 96

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I+G Y LEVSSPG+DRP+  ++ + R+ G  V   + ++   +++  G I    E 
Sbjct: 97  VEDPIDGEYTLEVSSPGLDRPLYTEAQYARYVGETVNLRLRIAVEGRRRFKGVISAIEEG 156

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT-DELLRA 181
              L+ + +         + +  +++    L+   D++LR 
Sbjct: 157 ALLLQFDNQ--------TVRLPIETIDKGNLVPRYDDILRE 189


>gi|320540175|ref|ZP_08039830.1| putative conserved protein [Serratia symbiotica str. Tucson]
 gi|320029841|gb|EFW11865.1| putative conserved protein [Serratia symbiotica str. Tucson]
          Length = 156

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  +S +L
Sbjct: 10  LEQKLTEMLLAPVEALGFEFVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQVSAVL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 69  DVEEPIAVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGIIKSVEG 128

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  + + E          +  ++  A LI
Sbjct: 129 EMITVTVDGKDEV--------FALSNIQKANLI 153


>gi|53729158|ref|ZP_00133985.2| COG0779: Uncharacterized protein conserved in bacteria
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208119|ref|YP_001053344.1| hypothetical protein APL_0637 [Actinobacillus pleuropneumoniae L20]
 gi|165976049|ref|YP_001651642.1| hypothetical protein APJL_0628 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|190149947|ref|YP_001968472.1| hypothetical protein APP7_0678 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307249836|ref|ZP_07531812.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307261094|ref|ZP_07542773.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307263275|ref|ZP_07544893.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|167016737|sp|A3N003|RIMP_ACTP2 RecName: Full=Ribosome maturation factor rimP
 gi|226707976|sp|B0BNR3|RIMP_ACTPJ RecName: Full=Ribosome maturation factor rimP
 gi|226708014|sp|B3H161|RIMP_ACTP7 RecName: Full=Ribosome maturation factor rimP
 gi|126096911|gb|ABN73739.1| hypothetical protein APL_0637 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|165876150|gb|ABY69198.1| hypothetical protein APJL_0628 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189915078|gb|ACE61330.1| hypothetical protein APP7_0678 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306858138|gb|EFM90218.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306869226|gb|EFN01024.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871337|gb|EFN03063.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 153

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE M F  V I        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEELVSDTIESMGFELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKLESVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +    +         +F ++  A L+
Sbjct: 123 GDLITLTVDNETRQ--------FAFGNIQKANLV 148


>gi|209920647|ref|YP_002294731.1| hypothetical protein ECSE_3456 [Escherichia coli SE11]
 gi|215488488|ref|YP_002330919.1| hypothetical protein E2348C_3451 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|253771994|ref|YP_003034825.1| hypothetical protein ECBD_0570 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|260845985|ref|YP_003223763.1| hypothetical protein ECO103_3919 [Escherichia coli O103:H2 str.
           12009]
 gi|260857299|ref|YP_003231190.1| hypothetical protein ECO26_4276 [Escherichia coli O26:H11 str.
           11368]
 gi|260869922|ref|YP_003236324.1| hypothetical protein ECO111_3994 [Escherichia coli O111:H- str.
           11128]
 gi|261228182|ref|ZP_05942463.1| hypothetical protein EscherichiacoliO157_26753 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255038|ref|ZP_05947571.1| hypothetical protein EscherichiacoliO157EcO_04328 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|297519523|ref|ZP_06937909.1| hypothetical protein EcolOP_17907 [Escherichia coli OP50]
 gi|300817578|ref|ZP_07097794.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300823867|ref|ZP_07103991.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300897934|ref|ZP_07116313.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300904356|ref|ZP_07122209.1| hypothetical protein HMPREF9536_02438 [Escherichia coli MS 84-1]
 gi|300918925|ref|ZP_07135484.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300926091|ref|ZP_07141909.1| hypothetical protein HMPREF9548_04117 [Escherichia coli MS 182-1]
 gi|300929860|ref|ZP_07145306.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300938080|ref|ZP_07152858.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300948820|ref|ZP_07162888.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300955756|ref|ZP_07168101.1| hypothetical protein HMPREF9547_01616 [Escherichia coli MS 175-1]
 gi|300977837|ref|ZP_07174077.1| hypothetical protein HMPREF9553_01175 [Escherichia coli MS 200-1]
 gi|300990770|ref|ZP_07179342.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301022025|ref|ZP_07185968.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|301025985|ref|ZP_07189467.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|301047987|ref|ZP_07195029.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|301301774|ref|ZP_07207908.1| hypothetical protein HMPREF9347_00334 [Escherichia coli MS 124-1]
 gi|301326407|ref|ZP_07219761.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|301644881|ref|ZP_07244853.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|306816486|ref|ZP_07450618.1| hypothetical protein ECNC101_07709 [Escherichia coli NC101]
 gi|307139857|ref|ZP_07499213.1| hypothetical protein EcolH7_17218 [Escherichia coli H736]
 gi|309785497|ref|ZP_07680128.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|309793748|ref|ZP_07688174.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|312972557|ref|ZP_07786730.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|42143|emb|CAA25199.1| unnamed protein product [Escherichia coli]
 gi|169753506|gb|ACA76205.1| protein of unknown function DUF150 [Escherichia coli ATCC 8739]
 gi|209913906|dbj|BAG78980.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|215266560|emb|CAS10999.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|253323038|gb|ACT27640.1| protein of unknown function DUF150 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|257755948|dbj|BAI27450.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257761132|dbj|BAI32629.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|257766278|dbj|BAI37773.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|260447801|gb|ACX38223.1| protein of unknown function DUF150 [Escherichia coli DH1]
 gi|281180214|dbj|BAI56544.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|284923194|emb|CBG36288.1| conserved hypothetical protein [Escherichia coli 042]
 gi|299879880|gb|EFI88091.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|300300130|gb|EFJ56515.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300308214|gb|EFJ62734.1| hypothetical protein HMPREF9553_01175 [Escherichia coli MS 200-1]
 gi|300317389|gb|EFJ67173.1| hypothetical protein HMPREF9547_01616 [Escherichia coli MS 175-1]
 gi|300358364|gb|EFJ74234.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300397740|gb|EFJ81278.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300403707|gb|EFJ87245.1| hypothetical protein HMPREF9536_02438 [Escherichia coli MS 84-1]
 gi|300407078|gb|EFJ90616.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|300413951|gb|EFJ97261.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300417856|gb|EFK01167.1| hypothetical protein HMPREF9548_04117 [Escherichia coli MS 182-1]
 gi|300451709|gb|EFK15329.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300456940|gb|EFK20433.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300462222|gb|EFK25715.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300523635|gb|EFK44704.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300529876|gb|EFK50938.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300842755|gb|EFK70515.1| hypothetical protein HMPREF9347_00334 [Escherichia coli MS 124-1]
 gi|300846896|gb|EFK74656.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|301076826|gb|EFK91632.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|305850051|gb|EFM50510.1| hypothetical protein ECNC101_07709 [Escherichia coli NC101]
 gi|307625229|gb|ADN69533.1| hypothetical protein UM146_00520 [Escherichia coli UM146]
 gi|308122705|gb|EFO59967.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|308926617|gb|EFP72093.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|310332499|gb|EFP99712.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|312947729|gb|ADR28556.1| hypothetical protein NRG857_15730 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315062478|gb|ADT76805.1| conserved hypothetical protein [Escherichia coli W]
 gi|315257096|gb|EFU37064.1| 15 kDa protein [Escherichia coli MS 85-1]
 gi|315288928|gb|EFU48326.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|315294915|gb|EFU54254.1| conserved hypothetical protein [Escherichia coli MS 153-1]
 gi|315297878|gb|EFU57148.1| conserved hypothetical protein [Escherichia coli MS 16-3]
 gi|320175534|gb|EFW50630.1| hypothetical protein SDB_01982 [Shigella dysenteriae CDC 74-1112]
 gi|320189524|gb|EFW64183.1| hypothetical protein ECoD_04531 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320202084|gb|EFW76659.1| hypothetical protein ECoL_00712 [Escherichia coli EC4100B]
 gi|320640242|gb|EFX09814.1| ribosome maturation protein RimP [Escherichia coli O157:H7 str.
           G5101]
 gi|320645539|gb|EFX14548.1| ribosome maturation protein RimP [Escherichia coli O157:H- str.
           493-89]
 gi|320650849|gb|EFX19306.1| ribosome maturation protein RimP [Escherichia coli O157:H- str. H
           2687]
 gi|320656230|gb|EFX24142.1| ribosome maturation protein RimP [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661920|gb|EFX29328.1| ribosome maturation protein RimP [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666755|gb|EFX33734.1| ribosome maturation protein RimP [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323154384|gb|EFZ40585.1| hypothetical protein ECEPECA14_3686 [Escherichia coli EPECa14]
 gi|323173569|gb|EFZ59198.1| hypothetical protein ECLT68_1886 [Escherichia coli LT-68]
 gi|323178883|gb|EFZ64459.1| hypothetical protein ECOK1180_2616 [Escherichia coli 1180]
 gi|323183125|gb|EFZ68523.1| hypothetical protein ECOK1357_3540 [Escherichia coli 1357]
 gi|324008769|gb|EGB77988.1| hypothetical protein HMPREF9532_01528 [Escherichia coli MS 57-2]
 gi|324012104|gb|EGB81323.1| hypothetical protein HMPREF9533_03857 [Escherichia coli MS 60-1]
 gi|324018306|gb|EGB87525.1| hypothetical protein HMPREF9542_03022 [Escherichia coli MS 117-3]
 gi|326337872|gb|EGD61706.1| hypothetical protein ECF_05498 [Escherichia coli O157:H7 str. 1125]
 gi|326347441|gb|EGD71166.1| hypothetical protein ECoA_00752 [Escherichia coli O157:H7 str.
           1044]
 gi|330909226|gb|EGH37740.1| clustered with transcription termination protein NusA [Escherichia
           coli AA86]
 gi|332086489|gb|EGI91636.1| hypothetical protein SD15574_3713 [Shigella dysenteriae 155-74]
 gi|332345127|gb|AEE58461.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|332754726|gb|EGJ85092.1| hypothetical protein SF274771_3795 [Shigella flexneri 2747-71]
 gi|332765167|gb|EGJ95394.1| ribosome maturation protein [Shigella flexneri 2930-71]
 gi|332998812|gb|EGK18408.1| hypothetical protein SFVA6_4094 [Shigella flexneri VA-6]
 gi|332999249|gb|EGK18835.1| hypothetical protein SFK272_3978 [Shigella flexneri K-272]
 gi|333000398|gb|EGK19981.1| hypothetical protein SFK218_4200 [Shigella flexneri K-218]
 gi|333014539|gb|EGK33886.1| hypothetical protein SFK304_4023 [Shigella flexneri K-304]
          Length = 140

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|320186659|gb|EFW61383.1| hypothetical protein SGF_01107 [Shigella flexneri CDC 796-83]
 gi|332090719|gb|EGI95813.1| hypothetical protein SB359474_3714 [Shigella boydii 3594-74]
          Length = 140

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +      L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGHTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|261342616|ref|ZP_05970474.1| hypothetical protein ENTCAN_09187 [Enterobacter cancerogenus ATCC
           35316]
 gi|296104884|ref|YP_003615030.1| YhbC-like protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|288315264|gb|EFC54202.1| hypothetical protein ENTCAN_09187 [Enterobacter cancerogenus ATCC
           35316]
 gi|295059343|gb|ADF64081.1| YhbC-like protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 140

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     ++R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYVRFTGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|209966174|ref|YP_002299089.1| hypothetical protein RC1_2909 [Rhodospirillum centenum SW]
 gi|259586184|sp|B6IVF3|RIMP_RHOCS RecName: Full=Ribosome maturation factor rimP
 gi|209959640|gb|ACJ00277.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 252

 Score =  181 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 20/181 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
           M     I  +I+P +E M +  V++ L   +   LQI  ER DG  MT+ DC ++S+A+S
Sbjct: 1   MEAVERIGRIIEPSVEAMGYELVRVQLSGGQRPTLQIMAERSDGAAMTVEDCADISRAVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ + G Y LEVSSPGIDRP+ R  DF R+ G     E       +++  G + G
Sbjct: 61  ALLDVEDPLPGAYTLEVSSPGIDRPLTRLKDFERFAGFEARLETKAPVDGRKRFRGFLAG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQ-------------------IAISFDSLLSARLIVTDEL 178
             +    L      +                          + I F  +L A+L +TDEL
Sbjct: 121 IEDDAVRLALPVEKKARKGAKAAPTRDAADAGEAGDAEATLVVIPFGLVLKAKLELTDEL 180

Query: 179 L 179
           L
Sbjct: 181 L 181


>gi|229061420|ref|ZP_04198765.1| hypothetical protein bcere0026_35060 [Bacillus cereus AH603]
 gi|229134624|ref|ZP_04263434.1| hypothetical protein bcere0014_35330 [Bacillus cereus BDRD-ST196]
 gi|228648885|gb|EEL04910.1| hypothetical protein bcere0014_35330 [Bacillus cereus BDRD-ST196]
 gi|228717843|gb|EEL69491.1| hypothetical protein bcere0026_35060 [Bacillus cereus AH603]
          Length = 164

 Score =  181 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VEIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMFE 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++        L    +  K     +I I  D + +ARL VT
Sbjct: 125 GKLLSYDGNTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|170717518|ref|YP_001784610.1| hypothetical protein HSM_1288 [Haemophilus somnus 2336]
 gi|226695902|sp|B0UU11|RIMP_HAES2 RecName: Full=Ribosome maturation factor rimP
 gi|168825647|gb|ACA31018.1| protein of unknown function DUF150 [Haemophilus somnus 2336]
          Length = 153

 Score =  181 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++QP +E++      I          +++++++ DG +T+ DC ++S+ +S +
Sbjct: 4   LEDKLQELLQPSVEDLGCELWGIECQRSGRFFTVRLYIDKKDGGVTVDDCADVSRQVSAV 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP+     F  + G  ++  + +   D++K  GK+    
Sbjct: 64  LDVEDPIADKYNLEVSSPGLNRPLFTLKQFENYIGQDISVHLRVPMFDRRKWQGKLEKIE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + + +         + F ++  A ++
Sbjct: 124 NDMLTLIVDNQPQV--------LVFGNIQKANVV 149


>gi|319790653|ref|YP_004152286.1| protein of unknown function DUF150 [Thermovibrio ammonificans HB-1]
 gi|317115155|gb|ADU97645.1| protein of unknown function DUF150 [Thermovibrio ammonificans HB-1]
          Length = 162

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 7/153 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P++EE  F  V +   +E    +L+I+ +R  G +T+ DC+ +S+ I  +
Sbjct: 8   VIDKVKELLAPILEEGGFELVDVEFQKEPVGWVLRIYADRPQGGITISDCQWISERIGTL 67

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++I   Y LEVSSPG+DRP+  + DF R  G VV  +      +++   G ++ TS
Sbjct: 68  LDVEDVIPHAYHLEVSSPGLDRPLKTQRDFERHRGVVVKIKTHEPMDNQRNFKGAVVSTS 127

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E G  +    R         + I +D++ SAR+
Sbjct: 128 ERGVTVHDVSR------NADVEIPYDNIKSARV 154


>gi|295097659|emb|CBK86749.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 140

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFVRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     ++R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTDEHYVRFTGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|229593539|ref|YP_001476723.2| hypothetical protein Spro_0487 [Serratia proteamaculans 568]
          Length = 150

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEEPITVAYNLEVSSPGLDRPMFTAEHYTRFLGDEVSLVLRMAVQNRRKWQGIIKSVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E + E          +  ++  A L+
Sbjct: 123 EMITVAVEGKDEV--------FALSNIQKANLV 147


>gi|58040012|ref|YP_191976.1| hypothetical protein GOX1579 [Gluconobacter oxydans 621H]
 gi|81351770|sp|Q5FQM6|RIMP_GLUOX RecName: Full=Ribosome maturation factor rimP
 gi|58002426|gb|AAW61320.1| Hypothetical protein associated with nus operon [Gluconobacter
           oxydans 621H]
          Length = 203

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 11/183 (6%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M   +       P +    GL   I+  I P + ++ +  V++S+L      +QI  +R 
Sbjct: 1   MSQQNASSDIELPHL---TGLEARIAERIAPTLADLGYELVRLSVLGRDTPTIQIMADRA 57

Query: 61  DGN-MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
           +G+ +++ DCE++S A   ILDV++ I G + LEVSS GIDRP+ R  D+ R+ GH+   
Sbjct: 58  NGSLISVEDCEQISHAAGAILDVDDPIPGAWMLEVSSAGIDRPLTRAKDWERFAGHLAKA 117

Query: 120 EIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           E+ +    +++  G +MG  +    +  +   E         +    +  ARL++TD L+
Sbjct: 118 ELDVPLNGRRRFSGTVMGARDGNAIIRLDDGTEA-------VLPLVDIRKARLVLTDALI 170

Query: 180 RAS 182
            AS
Sbjct: 171 EAS 173


>gi|307245493|ref|ZP_07527580.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254447|ref|ZP_07536284.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258906|ref|ZP_07540637.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853552|gb|EFM85770.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862588|gb|EFM94545.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866930|gb|EFM98787.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 153

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE M    V I        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEELVSDTIESMGCELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKLESVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +    +         +F ++  A L+
Sbjct: 123 GDLITLTVDNEARQ--------FAFGNIQKANLV 148


>gi|229168556|ref|ZP_04296279.1| hypothetical protein bcere0007_35130 [Bacillus cereus AH621]
 gi|228614962|gb|EEK72064.1| hypothetical protein bcere0007_35130 [Bacillus cereus AH621]
          Length = 164

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VEIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMFE 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|78485465|ref|YP_391390.1| hypothetical protein Tcr_1121 [Thiomicrospira crunogena XCL-2]
 gi|91207998|sp|Q31GK7|RIMP_THICR RecName: Full=Ribosome maturation factor rimP
 gi|78363751|gb|ABB41716.1| conserved hypothetical protein with DUF150 domain [Thiomicrospira
           crunogena XCL-2]
          Length = 151

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I ++++P IE M F+      L   K+  L+I++++D+  +T+ DC ++S+ +S
Sbjct: 1   MTLEDKIENLLRPTIETMGFQFWGCEYLPAGKHSTLRIYIDKDEVGVTVDDCGKVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            I+DVE+ I   Y LEVSSPG+DRP+     +  + G  V          +++  G +  
Sbjct: 61  AIMDVEDPISNAYMLEVSSPGMDRPLFHPEQYKAYEGQEVQVRTSSPVMGRKRFKGVMSQ 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            SE+   +E +             I F  +  A ++
Sbjct: 121 VSESDIAVEVDGELY--------EIPFSLIDKANVV 148


>gi|242240751|ref|YP_002988932.1| hypothetical protein Dd703_3348 [Dickeya dadantii Ech703]
 gi|242132808|gb|ACS87110.1| protein of unknown function DUF150 [Dickeya dadantii Ech703]
          Length = 140

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S ++DVE+ I 
Sbjct: 1   MISAPVEALGYELVGIEFIRGRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVMDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGVDRPLFTAEHYERFTGEEVSLVLRMAVQNRRKWQGIIKSVEGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|33152525|ref|NP_873878.1| hypothetical protein HD1463 [Haemophilus ducreyi 35000HP]
 gi|51316788|sp|Q7VLI0|RIMP_HAEDU RecName: Full=Ribosome maturation factor rimP
 gi|33148748|gb|AAP96267.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 154

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +I   IE M +  V +        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLTVLISDTIESMGYELVGVECQHAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+    
Sbjct: 63  FDVEDPISDKYNLEVSSPGLDRPLFTLAHYARFVGREMVIHLRIPMFDRRKWQGKLTKVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                LE E  GE           F ++  A LI
Sbjct: 123 GDLISLEIENNGEHQFI-------FSNIQKANLI 149


>gi|156975665|ref|YP_001446572.1| hypothetical protein VIBHAR_03398 [Vibrio harveyi ATCC BAA-1116]
 gi|166990836|sp|A7MUV0|RIMP_VIBHB RecName: Full=Ribosome maturation factor rimP
 gi|156527259|gb|ABU72345.1| hypothetical protein VIBHAR_03398 [Vibrio harveyi ATCC BAA-1116]
          Length = 151

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E   +  V +  +    +  L+I+++ ++G + +  C E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEATGYELVGLEFIRAGAHSTLRIYIDHENG-INVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  E + E          +  ++  A LI
Sbjct: 121 VDGETIAVTCEGQQE--------EFALSNISKANLI 148


>gi|283836284|ref|ZP_06356025.1| hypothetical protein CIT292_10732 [Citrobacter youngae ATCC 29220]
 gi|291067647|gb|EFE05756.1| hypothetical protein CIT292_10732 [Citrobacter youngae ATCC 29220]
          Length = 140

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     ++R+ G  V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPLFTAEHYVRFLGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|228916454|ref|ZP_04080020.1| hypothetical protein bthur0012_36690 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228928865|ref|ZP_04091897.1| hypothetical protein bthur0010_35570 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228935131|ref|ZP_04097958.1| hypothetical protein bthur0009_35840 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228947536|ref|ZP_04109826.1| hypothetical protein bthur0007_36640 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228986960|ref|ZP_04147086.1| hypothetical protein bthur0001_36350 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229092857|ref|ZP_04223991.1| hypothetical protein bcere0021_36040 [Bacillus cereus Rock3-42]
 gi|229123330|ref|ZP_04252534.1| hypothetical protein bcere0016_36190 [Bacillus cereus 95/8201]
 gi|229140458|ref|ZP_04269013.1| hypothetical protein bcere0013_35570 [Bacillus cereus BDRD-ST26]
 gi|229157393|ref|ZP_04285471.1| hypothetical protein bcere0010_35760 [Bacillus cereus ATCC 4342]
 gi|229186054|ref|ZP_04313224.1| hypothetical protein bcere0004_36010 [Bacillus cereus BGSC 6E1]
 gi|229197927|ref|ZP_04324643.1| hypothetical protein bcere0001_34630 [Bacillus cereus m1293]
 gi|228585645|gb|EEK43747.1| hypothetical protein bcere0001_34630 [Bacillus cereus m1293]
 gi|228597473|gb|EEK55123.1| hypothetical protein bcere0004_36010 [Bacillus cereus BGSC 6E1]
 gi|228626120|gb|EEK82869.1| hypothetical protein bcere0010_35760 [Bacillus cereus ATCC 4342]
 gi|228643019|gb|EEK99295.1| hypothetical protein bcere0013_35570 [Bacillus cereus BDRD-ST26]
 gi|228660106|gb|EEL15742.1| hypothetical protein bcere0016_36190 [Bacillus cereus 95/8201]
 gi|228690479|gb|EEL44262.1| hypothetical protein bcere0021_36040 [Bacillus cereus Rock3-42]
 gi|228772738|gb|EEM21178.1| hypothetical protein bthur0001_36350 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228812056|gb|EEM58387.1| hypothetical protein bthur0007_36640 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228824496|gb|EEM70301.1| hypothetical protein bthur0009_35840 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228830672|gb|EEM76277.1| hypothetical protein bthur0010_35570 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228843033|gb|EEM88115.1| hypothetical protein bthur0012_36690 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 164

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 125 GKMLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|270158100|ref|ZP_06186757.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|289163635|ref|YP_003453773.1| hypothetical protein LLO_0291 [Legionella longbeachae NSW150]
 gi|269990125|gb|EEZ96379.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|288856808|emb|CBJ10619.1| putative conserved hypothetical protein [Legionella longbeachae
           NSW150]
          Length = 147

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++  ++ P I +M +       L + ++ LL+I++++ DG +T+ DCE +S  +S +
Sbjct: 2   IQDELEHLLAPSIADMGYELWGCEYLSQGRHSLLRIYIDKSDG-ITIDDCEAVSHQVSAL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I G+Y LEVSSPGI RP+ +   + R+ G  V  +       K+KL+G ++  S
Sbjct: 61  LDVEDPIHGNYSLEVSSPGIPRPLFKSWQYQRYLGQEVQVKTFKPVCGKRKLLGTLVSAS 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ET   L      +         + F +++ A L V
Sbjct: 121 ETSIVLNLGNEDQ--------ELLFSNIVKASLTV 147


>gi|94501386|ref|ZP_01307906.1| hypothetical protein RED65_04750 [Oceanobacter sp. RED65]
 gi|94426499|gb|EAT11487.1| hypothetical protein RED65_04750 [Oceanobacter sp. RED65]
          Length = 175

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 9/156 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  ++QPV+E M +    +  + + K+ LL+IF++ ++G + + DC  +S+ +S ++
Sbjct: 24  DQQLVELLQPVVEAMGYEFWGLEYIAKGKDSLLRIFIDGENG-VNVDDCAAVSRQVSGVM 82

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     F R+ G  V  ++  +   ++K  GK++G  +
Sbjct: 83  DVEDPITSEYNLEVSSPGLDRPLFTLEHFERYVGEFVDIKLRYAFEGRRKFKGKLVGIED 142

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
               +         ++  +  +  DS+  A LI  D
Sbjct: 143 GEDIV-------VHVDNHEYLLPIDSIDKANLIYRD 171


>gi|227357077|ref|ZP_03841447.1| YhbC family protein [Proteus mirabilis ATCC 29906]
 gi|227162769|gb|EEI47732.1| YhbC family protein [Proteus mirabilis ATCC 29906]
          Length = 170

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 82/158 (51%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   +++++   +E + F  V +  +  +   L+I+++ ++G +T+ DC ++S  
Sbjct: 19  VGLSTLEQKLTAMVSAPVEALGFEFVGLEFIRGRVSTLRIYIDSEEG-ITVDDCADVSHQ 77

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I+  Y LE+SSPG++RP+   + + ++ G  VA  + ++  +++K  G I
Sbjct: 78  VSAVLDVEDPIQTFYNLEISSPGLERPLFTTTHYEQFIGEEVAVVLRIAMQNRRKWQGII 137

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +     +  + + E          +  ++  A L+
Sbjct: 138 KSVAGEMITVTVDGKDEV--------FALSNIQKANLV 167


>gi|197364150|ref|YP_002143787.1| hypothetical protein SSPA2946 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|207858538|ref|YP_002245189.1| hypothetical protein SEN3123 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224585086|ref|YP_002638885.1| hypothetical protein SPC_3359 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238910083|ref|ZP_04653920.1| hypothetical protein SentesTe_02955 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825803|ref|ZP_06544971.1| hypothetical protein Salmonellentericaenterica_10351 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25302491|pir||AB0902 conserved hypothetical protein STY3469 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421847|gb|AAL22160.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16504356|emb|CAD07808.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139176|gb|AAO70744.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129477|gb|AAV78983.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|160867493|gb|ABX24116.1| hypothetical protein SARI_04336 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161365658|gb|ABX69426.1| hypothetical protein SPAB_04100 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197095627|emb|CAR61195.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|206710341|emb|CAR34699.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224469614|gb|ACN47444.1| hypothetical protein SPC_3359 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261248454|emb|CBG26291.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|301159838|emb|CBW19357.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914314|dbj|BAJ38288.1| hypothetical protein STMDT12_C33450 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321225972|gb|EFX51026.1| clustered with transcription termination protein NusA [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|332990146|gb|AEF09129.1| hypothetical protein STMUK_3272 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 140

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|212639525|ref|YP_002316045.1| hypothetical protein Aflv_1699 [Anoxybacillus flavithermus WK1]
 gi|212561005|gb|ACJ34060.1| Uncharacterized conserved protein, YhbC family [Anoxybacillus
           flavithermus WK1]
          Length = 200

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++  M    V I  ++E KN  L++F++   G + +  C  +S+ +S  LD  
Sbjct: 52  VEELVTPIVTHMGLELVDIEYVKEGKNWFLRVFIDSPTG-IDIDQCGVVSEQLSEKLDEI 110

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ +  DF R  G  V  +       +++  G +        
Sbjct: 111 DPIPHNYFLEVSSPGAERPLKKARDFERAVGKNVYVKTYEPIDGQKEFEGLLTAFDGQT- 169

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +    +  I I ++ + SARL V
Sbjct: 170 ---VTVEVKVKTKKKTITIPYEKVASARLAV 197


>gi|52785643|ref|YP_091472.1| hypothetical protein BLi01884 [Bacillus licheniformis ATCC 14580]
 gi|52348145|gb|AAU40779.1| YlxS [Bacillus licheniformis ATCC 14580]
          Length = 166

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 82/156 (52%), Gaps = 6/156 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +S ++QP+++ +    V I  ++E     L++F++ DDG + + +C ++S+A+S  
Sbjct: 14  VIDTVSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDDG-VDIEECAKVSEALSEK 72

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I+ +Y LEVSSPG +RP+ +++DF++  G  V  +        ++  G++    
Sbjct: 73  LDEADPIKQNYFLEVSSPGAERPLKKEADFMKALGKNVYIKTYEPIEGNKEFEGELSAFD 132

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +    +  +      I I +D +  ARL V+
Sbjct: 133 GENVEVTVMIKTRRK----TINIPYDKVAKARLAVS 164


>gi|117618499|ref|YP_857796.1| 15 kDa protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117559906|gb|ABK36854.1| 15 kDa protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 175

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 10/161 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEEL 72
           R      L   ++ +++  +  + F    I  +   K+  L+++++ + G +++ +C E+
Sbjct: 20  RRVTLATLEQRLTDLLEAPVVALGFELWGIEFIRAGKHSTLRVYIDGEHG-VSVENCAEV 78

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S  +  I+DVE+ I   Y LEVSSPG+DRP+ + + F ++ G   A  + +++ +++K  
Sbjct: 79  SHQVGAIMDVEDPITEEYYLEVSSPGLDRPLFKVAQFEKYVGQEAAVTLRMATNNRRKFK 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G I         L  + + E         ++F ++  A ++
Sbjct: 139 GVIKAVQGDMITLTVDGKDEV--------LAFTNIQKANIV 171


>gi|27365055|ref|NP_760583.1| ribosome maturation protein RimP [Vibrio vulnificus CMCP6]
 gi|37680894|ref|NP_935503.1| hypothetical protein VV2710 [Vibrio vulnificus YJ016]
 gi|320155439|ref|YP_004187818.1| clustered with transcription termination protein NusA [Vibrio
           vulnificus MO6-24/O]
 gi|34223112|sp|Q8DBW2|RIMP_VIBVU RecName: Full=Ribosome maturation factor rimP
 gi|51316954|sp|Q7MI07|RIMP_VIBVY RecName: Full=Ribosome maturation factor rimP
 gi|27361201|gb|AAO10110.1| clustered with transcription termination protein NusA [Vibrio
           vulnificus CMCP6]
 gi|37199643|dbj|BAC95474.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
 gi|319930751|gb|ADV85615.1| clustered with transcription termination protein NusA [Vibrio
           vulnificus MO6-24/O]
          Length = 151

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+I+++ ++G +T+ DC E+S  +S
Sbjct: 2   TGLERQLTEMLESAVVASGYELVGLEFIRAGEHSTLRIYIDHENG-ITVEDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG+DRP+ + + + ++ G  V   + ++  +++K  G+I  
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLDRPLFKPAHYEQFIGQEVNVVLKMAVANRRKWKGEIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  L  + + E          +  ++  A LI
Sbjct: 121 VDGEAITLTVDGQQE--------EFALSNISKANLI 148


>gi|228922571|ref|ZP_04085871.1| hypothetical protein bthur0011_35560 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228960033|ref|ZP_04121697.1| hypothetical protein bthur0005_35040 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229047503|ref|ZP_04193093.1| hypothetical protein bcere0027_34860 [Bacillus cereus AH676]
 gi|229071315|ref|ZP_04204538.1| hypothetical protein bcere0025_34880 [Bacillus cereus F65185]
 gi|229081072|ref|ZP_04213582.1| hypothetical protein bcere0023_37110 [Bacillus cereus Rock4-2]
 gi|229111288|ref|ZP_04240841.1| hypothetical protein bcere0018_35340 [Bacillus cereus Rock1-15]
 gi|229129093|ref|ZP_04258066.1| hypothetical protein bcere0015_35380 [Bacillus cereus BDRD-Cer4]
 gi|229146388|ref|ZP_04274759.1| hypothetical protein bcere0012_35310 [Bacillus cereus BDRD-ST24]
 gi|229152016|ref|ZP_04280211.1| hypothetical protein bcere0011_35560 [Bacillus cereus m1550]
 gi|229180093|ref|ZP_04307437.1| hypothetical protein bcere0005_34390 [Bacillus cereus 172560W]
 gi|228603302|gb|EEK60779.1| hypothetical protein bcere0005_34390 [Bacillus cereus 172560W]
 gi|228631365|gb|EEK87999.1| hypothetical protein bcere0011_35560 [Bacillus cereus m1550]
 gi|228637021|gb|EEK93480.1| hypothetical protein bcere0012_35310 [Bacillus cereus BDRD-ST24]
 gi|228654330|gb|EEL10195.1| hypothetical protein bcere0015_35380 [Bacillus cereus BDRD-Cer4]
 gi|228672064|gb|EEL27355.1| hypothetical protein bcere0018_35340 [Bacillus cereus Rock1-15]
 gi|228702116|gb|EEL54592.1| hypothetical protein bcere0023_37110 [Bacillus cereus Rock4-2]
 gi|228711769|gb|EEL63721.1| hypothetical protein bcere0025_34880 [Bacillus cereus F65185]
 gi|228723750|gb|EEL75105.1| hypothetical protein bcere0027_34860 [Bacillus cereus AH676]
 gi|228799549|gb|EEM46502.1| hypothetical protein bthur0005_35040 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228837000|gb|EEM82341.1| hypothetical protein bthur0011_35560 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 164

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I IS D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKK----EIQISMDKVANARLAVT 163


>gi|113460962|ref|YP_719029.1| hypothetical protein HS_0819 [Haemophilus somnus 129PT]
 gi|122945308|sp|Q0I3P7|RIMP_HAES1 RecName: Full=Ribosome maturation factor rimP
 gi|112823005|gb|ABI25094.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 153

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++QP +E++      I          +++++++ DG +T+ DC ++S+ +S +
Sbjct: 4   LEDKLQELLQPSVEDLGCELWGIECQRSGRFFTVRLYIDKKDGGVTVDDCADVSRQVSAV 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP+     F  + G  ++  + +   D++K  GK+    
Sbjct: 64  LDVEDPIADKYNLEVSSPGLNRPLFTLKQFENYIGQDISVHLRVPMLDRRKWQGKLEKIE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + + +         + F ++  A ++
Sbjct: 124 NDMLTLIVDNQPQV--------LVFGNIQKANVV 149


>gi|308173622|ref|YP_003920327.1| RNA-binding protein [Bacillus amyloliquefaciens DSM 7]
 gi|307606486|emb|CBI42857.1| putative RNA-binding protein [Bacillus amyloliquefaciens DSM 7]
 gi|328553446|gb|AEB23938.1| ribosome maturation protein RimP [Bacillus amyloliquefaciens TA208]
 gi|328911763|gb|AEB63359.1| putative RNA-binding protein [Bacillus amyloliquefaciens LL3]
          Length = 156

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 6/156 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + QP+++++    V I  ++E  N  L++F++ D+G + + +C ++S+A+S  
Sbjct: 5   VTDTVQEMAQPILDDLQLELVDIEFVKEGQNWFLRVFIDSDNG-VDIEECAKVSEALSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +        +   GK+    
Sbjct: 64  LDEADPITQNYFLEVSSPGAERPLKKKADFEKSLGKNVYMKTYEPIDGLKVFEGKLAEFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E   +  K     ++ I ++ + +ARL VT
Sbjct: 124 GQTATIEMTIKTRKK----RVNIPYEKIANARLAVT 155


>gi|260775411|ref|ZP_05884308.1| UPF0090 domain-containing protein [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608592|gb|EEX34757.1| UPF0090 domain-containing protein [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 151

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++ ++G +++ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDHENG-ISVDDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIHA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  +   E          +  ++  A LI
Sbjct: 121 IEGETVTVTVDGNAE--------EFALSNISKANLI 148


>gi|54298758|ref|YP_125127.1| hypothetical protein lpp2822 [Legionella pneumophila str. Paris]
 gi|53752543|emb|CAH13975.1| hypothetical protein lpp2822 [Legionella pneumophila str. Paris]
          Length = 152

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 10/161 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELS 73
           +F    +  D+  +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S
Sbjct: 1   MFIHTMINDDLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +S +LDVE+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G
Sbjct: 60  KQVSAMLDVEDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            I+  SE    L        D+N     I   +++ A L V
Sbjct: 120 IIVSASEDTIVL--------DINNEHQEILLSNIVKANLTV 152


>gi|260771175|ref|ZP_05880102.1| UPF0090 domain-containing protein [Vibrio furnissii CIP 102972]
 gi|260613772|gb|EEX38964.1| UPF0090 domain-containing protein [Vibrio furnissii CIP 102972]
 gi|315179219|gb|ADT86133.1| hypothetical protein vfu_A00938 [Vibrio furnissii NCTC 11218]
          Length = 151

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 84/156 (53%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ ++   +    +  V +  +   ++  L+I+++ ++G +T+ DC E+S  +S
Sbjct: 2   TGLERQLTEMLDAPVVASGYELVGLEFVRAGQHSTLRIYIDHENG-ITVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G+I+G
Sbjct: 61  AVLDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFKGHEVSIVLKMAVGNRRKWKGEILG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 ADGETINVMVDGQEE--------HFALSNISKANLI 148


>gi|229031447|ref|ZP_04187447.1| hypothetical protein bcere0028_35010 [Bacillus cereus AH1271]
 gi|228729736|gb|EEL80716.1| hypothetical protein bcere0028_35010 [Bacillus cereus AH1271]
          Length = 164

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VDIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFE 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           GK++    T   L    +  K     +I IS D + +ARL VT
Sbjct: 125 GKLLSYDGTTITLLLTIKTRKK----EIQISMDKVANARLAVT 163


>gi|322615293|gb|EFY12214.1| hypothetical protein SEEM315_15045 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618348|gb|EFY15239.1| hypothetical protein SEEM971_03440 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622847|gb|EFY19691.1| hypothetical protein SEEM973_09985 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626831|gb|EFY23628.1| hypothetical protein SEEM974_17064 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631400|gb|EFY28160.1| hypothetical protein SEEM201_11154 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635333|gb|EFY32047.1| hypothetical protein SEEM202_21223 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643468|gb|EFY40031.1| hypothetical protein SEEM954_03710 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647096|gb|EFY43597.1| hypothetical protein SEEM054_06288 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648899|gb|EFY45344.1| hypothetical protein SEEM675_09177 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655091|gb|EFY51402.1| hypothetical protein SEEM965_16526 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657694|gb|EFY53962.1| hypothetical protein SEEM19N_17226 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664190|gb|EFY60388.1| hypothetical protein SEEM801_14392 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667473|gb|EFY63635.1| hypothetical protein SEEM507_15450 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674721|gb|EFY70813.1| hypothetical protein SEEM877_12264 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675646|gb|EFY71719.1| hypothetical protein SEEM867_11084 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682282|gb|EFY78305.1| hypothetical protein SEEM180_00717 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684885|gb|EFY80883.1| hypothetical protein SEEM600_02779 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323191868|gb|EFZ77116.1| hypothetical protein SEEM581_13996 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199027|gb|EFZ84124.1| hypothetical protein SEEM501_06456 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204273|gb|EFZ89282.1| hypothetical protein SEEM460_13042 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207620|gb|EFZ92567.1| hypothetical protein SEEM020_13687 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211327|gb|EFZ96171.1| hypothetical protein SEEM6152_16965 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323214731|gb|EFZ99480.1| hypothetical protein SEEM0077_18874 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221211|gb|EGA05637.1| hypothetical protein SEEM0047_04951 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224048|gb|EGA08341.1| hypothetical protein SEEM0055_21925 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230303|gb|EGA14422.1| hypothetical protein SEEM0052_18579 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233279|gb|EGA17373.1| hypothetical protein SEEM3312_09406 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239316|gb|EGA23366.1| hypothetical protein SEEM5258_06940 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242433|gb|EGA26459.1| hypothetical protein SEEM1156_15792 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246943|gb|EGA30909.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254124|gb|EGA37944.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255241|gb|EGA39018.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262704|gb|EGA46260.1| hypothetical protein SEEM8284_03071 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264014|gb|EGA47522.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269400|gb|EGA52855.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 140

 Score =  180 bits (458), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGKMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|253991504|ref|YP_003042860.1| hypothetical protein PAU_04031 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638382|emb|CAR67004.1| Conserved Hypothetical Protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782954|emb|CAQ86119.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 152

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 80/158 (50%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++++I   +E + F  V +  +  +   L+I+++ ++G +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDSENG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LE+SSPG++RP+     + R+ G  V+  + L+  +++K +G I
Sbjct: 60  VSAVLDVEDPISVLYNLEISSPGLERPLFTAEHYQRFIGEEVSLVLRLAMQNRRKWLGVI 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 120 KTVDGEMITVTVDGKDEV--------FALSNIQKANLV 149


>gi|157085946|gb|ABV15624.1| hypothetical protein CKO_04571 [Citrobacter koseri ATCC BAA-895]
          Length = 140

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYARFLGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|237808992|ref|YP_002893432.1| hypothetical protein Tola_2248 [Tolumonas auensis DSM 9187]
 gi|259645129|sp|C4L8X6|RIMP_TOLAT RecName: Full=Ribosome maturation factor rimP
 gi|237501253|gb|ACQ93846.1| protein of unknown function DUF150 [Tolumonas auensis DSM 9187]
          Length = 152

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++   I  + +    I  +   K+  L+++++  +G +++ DC E S  +S +
Sbjct: 4   LEQRLTELLDAPIVALGYELWGIEFIRAGKHSTLRVYIDHANG-ISVDDCAEASHQVSAL 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+++   F R+ G V    + ++  +++K  G I    
Sbjct: 63  LDVEDPITTEYYLEVSSPGMDRPLLKPEHFARYIGQVATVTLRMAVNNRRKYKGTIKQVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + R E         ++F ++  A LI
Sbjct: 123 GEMITLTIDGRDEI--------LAFANIQQANLI 148


>gi|163802302|ref|ZP_02196196.1| hypothetical protein 1103602000417_AND4_14441 [Vibrio sp. AND4]
 gi|159173831|gb|EDP58645.1| hypothetical protein AND4_14441 [Vibrio sp. AND4]
          Length = 151

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 80/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E + +  V +  +    +  L+I+++ ++G + +  C E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEALGYELVGLEFIRAGAHSTLRIYIDHENG-INVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKATHYEQFIGHEVSIVLKMAVANRRKWNGIIHN 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  E + E          +  ++  A LI
Sbjct: 121 VDGETIAVTCEGQQE--------EFALSNISKANLI 148


>gi|329997773|ref|ZP_08302912.1| hypothetical protein HMPREF9538_00552 [Klebsiella sp. MS 92-3]
 gi|150956943|gb|ABR78973.1| hypothetical protein KPN_03578 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|328538907|gb|EGF64968.1| hypothetical protein HMPREF9538_00552 [Klebsiella sp. MS 92-3]
          Length = 140

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+ I 
Sbjct: 1   MLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|16078722|ref|NP_389541.1| hypothetical protein BSU16590 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221309537|ref|ZP_03591384.1| hypothetical protein Bsubs1_09141 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313861|ref|ZP_03595666.1| hypothetical protein BsubsN3_09072 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318784|ref|ZP_03600078.1| hypothetical protein BsubsJ_09001 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323056|ref|ZP_03604350.1| hypothetical protein BsubsS_09112 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321315426|ref|YP_004207713.1| ribosome maturation protein RimP [Bacillus subtilis BSn5]
 gi|418459|sp|P32726|RIMP_BACSU RecName: Full=Ribosome maturation factor rimP; AltName: Full=P15A
 gi|49315|emb|CAA79230.1| ORF1 [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634031|emb|CAB13532.1| putative RNA-binding protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|291484214|dbj|BAI85289.1| hypothetical protein BSNT_02698 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320021700|gb|ADV96686.1| ribosome maturation protein RimP [Bacillus subtilis BSn5]
          Length = 156

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 6/156 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + QP+++ +    V I  ++E     L++F++ DDG + + +C ++S+A+S  
Sbjct: 5   VTDTVQEMAQPIVDSLQLELVDIEFVKEGQSWFLRVFIDSDDG-VDIEECAKVSEALSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +        +   G++    
Sbjct: 64  LDEADPISQNYFLEVSSPGAERPLKKKADFEKSLGKNVYIKTYEPIDGVKVFEGELAEFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E   +  K     +I I ++ + +ARL VT
Sbjct: 124 GQTVTVEITIKTRKK----RINIPYEKIANARLAVT 155


>gi|197335158|ref|YP_002155239.1| protein VV1_1694 [Vibrio fischeri MJ11]
 gi|226707621|sp|B5FA77|RIMP_VIBFM RecName: Full=Ribosome maturation factor rimP
 gi|197316648|gb|ACH66095.1| protein VV1_1694 [Vibrio fischeri MJ11]
          Length = 151

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 80/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +  + +  V +  +    +  L++F++ ++G + + DC E S+ IS
Sbjct: 2   TGLERQLTEMLEAPVGALGYELVGLEFVRAGEHSTLRVFIDHENG-IFVEDCAEASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + +   +++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +     +  +   E          +  ++  A L+
Sbjct: 121 VNGEIVTVTVDGNNE--------EFALSNISKANLV 148


>gi|220927906|ref|YP_002504815.1| hypothetical protein Ccel_0453 [Clostridium cellulolyticum H10]
 gi|254803925|sp|B8I6E3|RIMP_CLOCE RecName: Full=Ribosome maturation factor rimP
 gi|219998234|gb|ACL74835.1| protein of unknown function DUF150 [Clostridium cellulolyticum H10]
          Length = 152

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 82/144 (56%), Gaps = 3/144 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ PV+E +++  V I  ++E  N  L++++++  G +++ DC+ +S+ +S 
Sbjct: 4   NIQQTVTELVSPVVESLNYELVDIEYVKEGANWYLRVYIDKP-GGISIDDCQAVSEQVSD 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD ++ I+  Y LEVSSPG+DRP+  + DF ++ G +V  ++      K+   G+++G 
Sbjct: 63  LLDKDDPIDQSYFLEVSSPGLDRPLKTEKDFAKYKGELVEVKVFQPIDGKKIFEGELVGL 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAI 162
            +    + ++          ++AI
Sbjct: 123 KDNIIVINQDGHN-VQFERDEVAI 145


>gi|149189796|ref|ZP_01868077.1| hypothetical protein VSAK1_11003 [Vibrio shilonii AK1]
 gi|148836445|gb|EDL53401.1| hypothetical protein VSAK1_11003 [Vibrio shilonii AK1]
          Length = 151

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E + +  V +  +    +  L+I+++ +DG +T+  C E+S  +S
Sbjct: 2   TGLERQLTELLEAPVEALGYELVGLEFIRAGEHSTLRIYIDHEDG-ITVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGTIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  +   E         ++  ++  A LI
Sbjct: 121 IEGETVTIIVDGNEE--------EMALSNISKANLI 148


>gi|54295604|ref|YP_128019.1| hypothetical protein lpl2691 [Legionella pneumophila str. Lens]
 gi|53755436|emb|CAH16932.1| hypothetical protein lpl2691 [Legionella pneumophila str. Lens]
          Length = 152

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 10/161 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELS 73
           +F    +  D+  +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S
Sbjct: 1   MFIHTMINDDLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +S +LDVE+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G
Sbjct: 60  KQVSAMLDVEDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            I+  S     L        D+N     I   +++ A L V
Sbjct: 120 IIVSASGDTIVL--------DINNEHQEILLSNIVKANLTV 152


>gi|323701862|ref|ZP_08113532.1| protein of unknown function DUF150 [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533166|gb|EGB23035.1| protein of unknown function DUF150 [Desulfotomaculum nigrificans
           DSM 574]
          Length = 153

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 10/160 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +++ I+P++EE     V +  ++E  N  L++F+++  G + L DC+ LS+
Sbjct: 1   MAKNSVVEKVTAAIEPIVEESKLELVNVEYVKEGGNWYLRVFIDKP-GGVDLDDCQMLSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +  +LD  + I   Y LEVSSPGI+RP+ +  DF R+ GH+V           +   GK
Sbjct: 60  KLDKLLDELDPIPQAYFLEVSSPGIERPLKKPEDFERFMGHLVNITTYTPIDGAKSFTGK 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G +E G  +E + +         + I  D + ++RL V
Sbjct: 120 LQGYTEAGIEIEVKGK--------PMLIPHDRVATSRLAV 151


>gi|119944577|ref|YP_942257.1| hypothetical protein Ping_0815 [Psychromonas ingrahamii 37]
 gi|167016814|sp|A1ST43|RIMP_PSYIN RecName: Full=Ribosome maturation factor rimP
 gi|119863181|gb|ABM02658.1| hypothetical protein DUF150 [Psychromonas ingrahamii 37]
          Length = 153

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 82/155 (52%), Gaps = 10/155 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ ++ P +E++ +  V +  +   K+  L++++++D+G + + DC  +S+ +S 
Sbjct: 3   SLEERLTEMLAPSVEDLGYELVGVEYIRAGKHSTLRVYIDQDEG-ILVDDCAAVSRQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           I+DVE+ I   Y LEVSSPG++RP+ +   +  + G  V  ++ +   ++++  G I+  
Sbjct: 62  IMDVEDPITNEYSLEVSSPGMNRPLFKAEHYQIFAGEEVKIQLRMPIQNRRRWKGVIVSA 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +    L  E R E+         S  ++  A ++
Sbjct: 122 EDEIICLNIEGREER--------FSLSNIQKANIV 148


>gi|51316751|sp|Q7MYY5|RIMP_PHOLL RecName: Full=Ribosome maturation factor rimP
 gi|36787788|emb|CAE16903.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 152

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 80/158 (50%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++++I   +E + F  V +  +  +   L+I+++ ++G +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDSENG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LE+SSPG++RP+     + R+ G  V+  + ++  +++K +G I
Sbjct: 60  VSAVLDVEDPISVLYNLEISSPGLERPLFTTEHYQRFIGEEVSLVLRIAMQNRRKWLGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +  + + E          +  ++  A L+
Sbjct: 120 KTVDGEMITVTVDGKDEV--------FALSNIQKANLV 149


>gi|322514416|ref|ZP_08067459.1| hypothetical protein HMPREF0027_1211 [Actinobacillus ureae ATCC
           25976]
 gi|322119664|gb|EFX91722.1| hypothetical protein HMPREF0027_1211 [Actinobacillus ureae ATCC
           25976]
          Length = 153

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE M    V I        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEELVSDTIESMGCELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLVHYQRFIGQEVVIHLCIPMFDRRKWQGKLESVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +    +         +F ++  A L+
Sbjct: 123 GDLITLTVDNEARQ--------FAFGNIQKANLV 148


>gi|259585707|sp|Q0A795|RIMP_ALHEH RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 9/154 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + ++I P++  M +  V I         LL+I+++  DG +TL DCE  S+ IS +L
Sbjct: 5   EDTLYALIDPLLTGMGYELVGIEYGGPAGKRLLRIYIDSPDG-ITLDDCETCSRQISAVL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I G Y LE+SSPG+DRP+ + SD+ R+ G  +   +      +++  G + G  +
Sbjct: 64  DVEDPIPGEYTLEISSPGLDRPIFKASDYDRFAGEQIKIRLSAPWEGRRRFKGVLAGLGD 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  +        +    ++ I  D +  ARLI+
Sbjct: 124 EGVRV-------VEAQGDEVQIPLDLIEKARLIL 150


>gi|295399849|ref|ZP_06809830.1| protein of unknown function DUF150 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111639|ref|YP_003989955.1| hypothetical protein GY4MC1_2648 [Geobacillus sp. Y4.1MC1]
 gi|294978252|gb|EFG53849.1| protein of unknown function DUF150 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216740|gb|ADP75344.1| protein of unknown function DUF150 [Geobacillus sp. Y4.1MC1]
          Length = 157

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++ +M    V I  ++E KN  L++F++ D+G + +  C  +S+ +S  LD  
Sbjct: 9   VEELVTPILADMDLELVDIEYVKEGKNWFLRVFIDSDEG-VDIEQCGTVSEKLSEKLDEV 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ + +DF R  G  V  +       +++  G++ G      
Sbjct: 68  DPIPHNYFLEVSSPGAERPLKKPADFTRAIGKHVYIKTYEPIEGEKEFEGELTGFDGKIV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +  + +  K      I I ++ + SARL V
Sbjct: 128 SVTVKDKTRKK----TIDIPYEKVASARLAV 154


>gi|296330874|ref|ZP_06873349.1| hypothetical protein BSU6633_07236 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674392|ref|YP_003866064.1| hypothetical protein BSUW23_08545 [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151879|gb|EFG92753.1| hypothetical protein BSU6633_07236 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412636|gb|ADM37755.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 156

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 6/156 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + QP+++ +    V I  ++E     L++F++ DDG + + +C ++S+A+S  
Sbjct: 5   VTDTVQEMAQPIVDSLQLELVDIEFVKEGQSWFLRVFIDSDDG-VDIEECAKVSEALSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +        +   G++    
Sbjct: 64  LDEADPISQNYFLEVSSPGAERPLKKKADFEKSLGKNVYIKTYEPIEGVKVFEGELAEFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E   +  K     +I I ++ + +ARL VT
Sbjct: 124 GQTVTVEITIKTRKK----RINIPYEKIANARLAVT 155


>gi|294634513|ref|ZP_06713048.1| hypothetical protein EDWATA_00308 [Edwardsiella tarda ATCC 23685]
 gi|291092027|gb|EFE24588.1| hypothetical protein EDWATA_00308 [Edwardsiella tarda ATCC 23685]
          Length = 140

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  ++  L+I+++ ++G +T+ DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRHSTLRIYIDSEEG-ITVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     + R+    V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGMDRPLFTAEHYTRFLNEEVTLVLRMAMQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           + + E          +  ++  A L+
Sbjct: 120 DGKDEV--------FALSNVQKANLV 137


>gi|229525294|ref|ZP_04414699.1| clustered with transcription termination protein NusA [Vibrio
           cholerae bv. albensis VL426]
 gi|229338875|gb|EEO03892.1| clustered with transcription termination protein NusA [Vibrio
           cholerae bv. albensis VL426]
          Length = 151

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 83/156 (53%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++ ++G +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENG-ITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGIIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 IDGETVVVMVDGQEE--------HFALSNISKANLI 148


>gi|89072573|ref|ZP_01159145.1| hypothetical protein SKA34_18649 [Photobacterium sp. SKA34]
 gi|89051677|gb|EAR57130.1| hypothetical protein SKA34_18649 [Photobacterium sp. SKA34]
          Length = 151

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++P +  + F  V +  +    +  L++F++ ++G + +  C E+S+ IS
Sbjct: 2   TALETQLTEMLEPSVLALGFELVGLEFIRAGEHSTLRVFIDHENG-INVDGCAEVSRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH     + ++ G+++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEANIVLKMAMGNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  L+ +   E        + +  ++  A L+
Sbjct: 121 VEGELITLKVDGNEE--------SFALSNISKANLV 148


>gi|161579560|ref|NP_931695.2| hypothetical protein plu4531 [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 150

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 79/153 (51%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++++I   +E + F  V +  +  +   L+I+++ ++G +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDSENG-ITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LE+SSPG++RP+     + R+ G  V+  + ++  +++K +G I     
Sbjct: 63  DVEDPISVLYNLEISSPGLERPLFTTEHYQRFIGEEVSLVLRIAMQNRRKWLGIIKTVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  + + E          +  ++  A L+
Sbjct: 123 EMITVTVDGKDEV--------FALSNIQKANLV 147


>gi|52842973|ref|YP_096772.1| hypothetical protein lpg2774 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|81376651|sp|Q5ZRV2|RIMP_LEGPH RecName: Full=Ribosome maturation factor rimP
 gi|91208410|sp|Q5X1C1|RIMP_LEGPA RecName: Full=Ribosome maturation factor rimP
 gi|259585808|sp|A5IHU9|RIMP_LEGPC RecName: Full=Ribosome maturation factor rimP
 gi|52630084|gb|AAU28825.1| hypothetical protein lpg2774 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 147

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  D+  +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S+ +S +
Sbjct: 2   INDDLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAM 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  S
Sbjct: 61  LDVEDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSAS 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    L        D+N     I   +++ A L V
Sbjct: 121 EDTIVL--------DINNEHQEILLSNIVKANLTV 147


>gi|294500901|ref|YP_003564601.1| hypothetical protein BMQ_4155 [Bacillus megaterium QM B1551]
 gi|294350838|gb|ADE71167.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 156

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 6/156 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  ++ P++EEM+   V+I  ++E K+  L++F++ D+G + + DC  +S+ +S 
Sbjct: 4   NVKQTVEEMVSPILEEMNLELVEIEYVKEGKDWFLRVFIDSDNG-VDIEDCGAVSEKLSE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +D  + I  +Y LEVSSPG +RP+ +  DF R  G  V  +        ++  G++   
Sbjct: 63  KMDAVDPIPHNYFLEVSSPGAERPLKKDKDFERAIGKHVYIKTYEPIEGAKEFEGELQSF 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 L    +         + + +D +  ARL +
Sbjct: 123 DGETVTLSIRIKTRTK----TVVLPYDKVAFARLAI 154


>gi|59711091|ref|YP_203867.1| hypothetical protein VF_0484 [Vibrio fischeri ES114]
 gi|75354545|sp|Q5E7L7|RIMP_VIBF1 RecName: Full=Ribosome maturation factor rimP
 gi|59479192|gb|AAW84979.1| YhbC-like protein [Vibrio fischeri ES114]
          Length = 151

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 80/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +  + +  V +  +    +  L++F++ ++G + + DC E S+ IS
Sbjct: 2   TGLERQLTEMLEAPVGALGYELVGLEFVRAGEHSTLRVFIDHENG-IFVEDCAEASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + +   +++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +     +  +   E          +  ++  A L+
Sbjct: 121 INGEIVTVTVDGNNE--------EFALSNISKANLV 148


>gi|261253852|ref|ZP_05946425.1| UPF0090 domain-containing protein [Vibrio orientalis CIP 102891]
 gi|260937243|gb|EEX93232.1| UPF0090 domain-containing protein [Vibrio orientalis CIP 102891]
          Length = 151

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++ ++G + + DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDHENG-INVDDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIHA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  E   E          +  ++  A LI
Sbjct: 121 VDGETISVTVEGNEE--------EFALSNISKANLI 148


>gi|197287228|ref|YP_002153100.1| hypothetical protein PMI3416 [Proteus mirabilis HI4320]
 gi|226703818|sp|B4F2B7|RIMP_PROMH RecName: Full=Ribosome maturation factor rimP
 gi|194684715|emb|CAR46695.1| conserved hypothetical protein [Proteus mirabilis HI4320]
          Length = 152

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 82/158 (51%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   +++++   +E + F  V +  +  +   L+I+++ ++G +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMVSAPVEALGFEFVGLEFIRGRVSTLRIYIDSEEG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I+  Y LE+SSPG++RP+   + + ++ G  VA  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPIQTFYNLEISSPGLERPLFTTTHYEQFIGEEVAVVLRIAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +     +  + + E          +  ++  A L+
Sbjct: 120 KSVAGEMITVTVDGKDEV--------FALSNIQKANLV 149


>gi|148361088|ref|YP_001252295.1| hypothetical protein LPC_3059 [Legionella pneumophila str. Corby]
 gi|148282861|gb|ABQ56949.1| conserved hypothetical protein; DUF150 [Legionella pneumophila str.
           Corby]
          Length = 140

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 10/148 (6%)

Query: 28  VIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S+ +S +LDVE+ I
Sbjct: 2   LLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAMLDVEDPI 60

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  SE    L 
Sbjct: 61  PGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVL- 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLIV 174
                  D+N     I   +++ A L V
Sbjct: 120 -------DINNEHQEILLSNIVKANLTV 140


>gi|49610183|emb|CAG73625.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 140

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG++RP+   + +L + G  VA  + ++  +++K +G I         +  
Sbjct: 60  VAYNLEVSSPGLERPLFTAAHYLHFVGEEVAVVLRMAVQNRRKWLGVIKAVDGEMITITV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|262401661|ref|ZP_06078227.1| UPF0090 domain-containing protein [Vibrio sp. RC586]
 gi|262352078|gb|EEZ01208.1| UPF0090 domain-containing protein [Vibrio sp. RC586]
          Length = 151

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++ ++G +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENG-ITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKPAHYEQFIGHEVSIVLKMAVANRRKWKGIIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 IEGETVAVTVDGQEE--------HFALSNISKANLI 148


>gi|260771816|ref|ZP_05880734.1| UPF0090 domain-containing protein [Vibrio metschnikovii CIP 69.14]
 gi|260613108|gb|EEX38309.1| UPF0090 domain-containing protein [Vibrio metschnikovii CIP 69.14]
          Length = 151

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+I+++ ++G +T+  C E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVAATGYELVGLEFVRAGEHSTLRIYIDHENG-ITVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 VEGETVTVIADGQEEY--------FALSNIAKANLI 148


>gi|15640661|ref|NP_230290.1| hypothetical protein VC0641 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587845|ref|ZP_01677602.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121728393|ref|ZP_01681421.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673580|ref|YP_001216135.1| hypothetical protein VC0395_A0172 [Vibrio cholerae O395]
 gi|153215845|ref|ZP_01950177.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153801997|ref|ZP_01956583.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153818682|ref|ZP_01971349.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822534|ref|ZP_01975201.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153826540|ref|ZP_01979207.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153829155|ref|ZP_01981822.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227080822|ref|YP_002809373.1| hypothetical protein VCM66_0599 [Vibrio cholerae M66-2]
 gi|229505737|ref|ZP_04395247.1| clustered with transcription termination protein NusA [Vibrio
           cholerae BX 330286]
 gi|229509230|ref|ZP_04398715.1| clustered with transcription termination protein NusA [Vibrio
           cholerae B33]
 gi|229512903|ref|ZP_04402370.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TMA 21]
 gi|229519561|ref|ZP_04409004.1| clustered with transcription termination protein NusA [Vibrio
           cholerae RC9]
 gi|229520932|ref|ZP_04410354.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TM 11079-80]
 gi|229530446|ref|ZP_04419834.1| clustered with transcription termination protein NusA [Vibrio
           cholerae 12129(1)]
 gi|229608848|ref|YP_002879496.1| hypothetical protein VCD_003770 [Vibrio cholerae MJ-1236]
 gi|254292207|ref|ZP_04962975.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254850875|ref|ZP_05240225.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744142|ref|ZP_05418095.1| UPF0090 domain-containing protein [Vibrio cholera CIRS 101]
 gi|262156118|ref|ZP_06029237.1| UPF0090 domain-containing protein [Vibrio cholerae INDRE 91/1]
 gi|262169940|ref|ZP_06037630.1| UPF0090 domain-containing protein [Vibrio cholerae RC27]
 gi|262189772|ref|ZP_06048123.1| UPF0090 domain-containing protein [Vibrio cholerae CT 5369-93]
 gi|298500757|ref|ZP_07010560.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|34223077|sp|Q9KU82|RIMP_VIBCH RecName: Full=Ribosome maturation factor rimP
 gi|172047699|sp|A5F924|RIMP_VIBC3 RecName: Full=Ribosome maturation factor rimP
 gi|254806528|sp|C3LSP6|RIMP_VIBCM RecName: Full=Ribosome maturation factor rimP
 gi|9655077|gb|AAF93807.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547881|gb|EAX57965.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121629327|gb|EAX61759.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124114562|gb|EAY33382.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124122456|gb|EAY41199.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126510762|gb|EAZ73356.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519952|gb|EAZ77175.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315463|gb|ABQ20002.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148875344|gb|EDL73479.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149739720|gb|EDM53927.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150421888|gb|EDN13867.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227008710|gb|ACP04922.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227012466|gb|ACP08676.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229332219|gb|EEN97707.1| clustered with transcription termination protein NusA [Vibrio
           cholerae 12129(1)]
 gi|229342165|gb|EEO07161.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TM 11079-80]
 gi|229344250|gb|EEO09225.1| clustered with transcription termination protein NusA [Vibrio
           cholerae RC9]
 gi|229350152|gb|EEO15105.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TMA 21]
 gi|229353802|gb|EEO18738.1| clustered with transcription termination protein NusA [Vibrio
           cholerae B33]
 gi|229357960|gb|EEO22877.1| clustered with transcription termination protein NusA [Vibrio
           cholerae BX 330286]
 gi|229371503|gb|ACQ61926.1| clustered with transcription termination protein NusA [Vibrio
           cholerae MJ-1236]
 gi|254846580|gb|EET24994.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738082|gb|EET93474.1| UPF0090 domain-containing protein [Vibrio cholera CIRS 101]
 gi|262021674|gb|EEY40385.1| UPF0090 domain-containing protein [Vibrio cholerae RC27]
 gi|262030154|gb|EEY48799.1| UPF0090 domain-containing protein [Vibrio cholerae INDRE 91/1]
 gi|262034349|gb|EEY52738.1| UPF0090 domain-containing protein [Vibrio cholerae CT 5369-93]
 gi|297540538|gb|EFH76596.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327483443|gb|AEA77850.1| hypothetical protein VCLMA_A0562 [Vibrio cholerae LMA3894-4]
          Length = 151

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 83/156 (53%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++ ++G +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENG-ITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 IDGETVAVMVDGQEE--------HFALSNISKANLI 148


>gi|223042073|ref|ZP_03612249.1| hypothetical protein AM202_0665 [Actinobacillus minor 202]
 gi|240949225|ref|ZP_04753569.1| hypothetical protein AM305_09786 [Actinobacillus minor NM305]
 gi|223017148|gb|EEF15584.1| hypothetical protein AM202_0665 [Actinobacillus minor 202]
 gi|240296341|gb|EER46985.1| hypothetical protein AM305_09786 [Actinobacillus minor NM305]
          Length = 153

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ + Q  IE M    V I        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLTELTQDTIEAMGCELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAHYERFVGREITIHLRIPMFDRRKWQGKLEKVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          +   +F ++  A L+
Sbjct: 123 GDLITLIVDNE--------ERQFAFGNIQKANLV 148


>gi|312885215|ref|ZP_07744894.1| hypothetical protein VIBC2010_19055 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367155|gb|EFP94728.1| hypothetical protein VIBC2010_19055 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 151

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++  +G + + DC E+S+ +S
Sbjct: 2   TGLEKQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDHANG-INVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSLVLKMAMNNRRKWKGIIES 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  +   E          +  ++  A LI
Sbjct: 121 VDGEIISIAVDGNTE--------EFALSNISKANLI 148


>gi|332141180|ref|YP_004426918.1| hypothetical protein MADE_1008910 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|259585705|sp|B4RXT6|RIMP_ALTMD RecName: Full=Ribosome maturation factor rimP
 gi|327551202|gb|AEA97920.1| hypothetical protein MADE_1008910 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 152

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 84/156 (53%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++P +E + F  V I  +   K+ +L++F++ ++G +T+ DC ++S  +S I
Sbjct: 4   LEEKLTEMLEPGVEALGFELVGIEFVRAGKHSILRVFIDHENG-ITVDDCADVSHQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+ ++  ++   G VV   + +   D++   GK++   
Sbjct: 63  LDVEDPISTEYNLEVSSPGMDRPLFKEKHYIESVGEVVQVRLSMPMDDRRNFKGKVLACE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E + +        Q  ++  ++    ++ T
Sbjct: 123 NGMVSIEVDGQ--------QFQLAVANIEKGNVVPT 150


>gi|323491075|ref|ZP_08096267.1| ribosome maturation protein RimP [Vibrio brasiliensis LMG 20546]
 gi|323314739|gb|EGA67811.1| ribosome maturation protein RimP [Vibrio brasiliensis LMG 20546]
          Length = 151

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++ ++G + + DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDHENG-INVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGIIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  E   E          +  ++  A LI
Sbjct: 121 VDGETISVTVEGNEE--------EFALSNISKANLI 148


>gi|91208407|sp|Q5WT34|RIMP_LEGPL RecName: Full=Ribosome maturation factor rimP
          Length = 147

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  D+  +++P+I+ M +       L + K+ LL+I++++ DG + + DC+E+S+ +S +
Sbjct: 2   INDDLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAM 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  S
Sbjct: 61  LDVEDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSAS 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L        D+N     I   +++ A L V
Sbjct: 121 GDTIVL--------DINNEHQEILLSNIVKANLTV 147


>gi|23099049|ref|NP_692515.1| hypothetical protein OB1594 [Oceanobacillus iheyensis HTE831]
 gi|34223115|sp|Q8EQU5|RIMP_OCEIH RecName: Full=Ribosome maturation factor rimP
 gi|22777277|dbj|BAC13550.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 156

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 6/151 (3%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
             ++ P++EE +   V I  ++E KN  L+++++++ G + + +C E+S+ +S  LD  +
Sbjct: 10  EELVTPILEEKNLELVDIEYVKEGKNWFLRVYIDKE-GGIDIMECGEVSELLSEKLDESD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPG++RP+ +K DF    G  +  ++       ++  G +         
Sbjct: 69  PITEAYFLEVSSPGVERPLKKKEDFDASIGKNIFVKLYEPIDGSKEYEGTLQSFDGETVT 128

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +E + +  K     Q+ I +  +  AR+ VT
Sbjct: 129 MEYKVKTRKK----QVEIPYSKIAKARIAVT 155


>gi|254787151|ref|YP_003074580.1| hypothetical protein TERTU_3219 [Teredinibacter turnerae T7901]
 gi|259645124|sp|C5BPW1|RIMP_TERTT RecName: Full=Ribosome maturation factor rimP
 gi|237686402|gb|ACR13666.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
          Length = 152

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 9/155 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +  +I PV+E +      +   ++ +  +L+IF+++    + + DCE++S+ +S 
Sbjct: 3   GKHTQLEELIAPVVESLECELWGLEYSVQGRRSMLRIFIDKQPDGVLVEDCEKVSRQVSS 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y LEVSSPG+DRP+ + + F  + GH VA  + ++   ++K  G + G 
Sbjct: 63  VLDVEDPISGEYTLEVSSPGMDRPLFKLAHFELYVGHRVALRLRVAFEGRRKFQGLLKGI 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +    LE        + E +  + F+ +  A ++
Sbjct: 123 EDGEIVLE--------VGEEEYLLPFELIDKANVV 149


>gi|326204062|ref|ZP_08193923.1| protein of unknown function DUF150 [Clostridium papyrosolvens DSM
           2782]
 gi|325985829|gb|EGD46664.1| protein of unknown function DUF150 [Clostridium papyrosolvens DSM
           2782]
          Length = 152

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 83/156 (53%), Gaps = 10/156 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ PV+E +++  V +  ++E  N  L++++++  G +++ DC+ +S+ +S 
Sbjct: 4   NIQQTVTELVSPVVENLNYELVDVEYVKEGANWYLRVYIDKP-GGISIDDCQAVSEQVSE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPG+DRP+  + DF ++ G +V  ++      K+   G+++G 
Sbjct: 63  LLDKNDPIDQSYYLEVSSPGLDRPLKTEKDFTKYKGELVEVKVFQPIDGKKIFEGELVGL 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    + ++           +    D +   + ++
Sbjct: 123 MDNFIVISQDGH--------DVQFERDKVAVVKRVI 150


>gi|52080266|ref|YP_079057.1| hypothetical protein BL01228 [Bacillus licheniformis ATCC 14580]
 gi|319645954|ref|ZP_08000184.1| hypothetical protein HMPREF1012_01218 [Bacillus sp. BT1B_CT2]
 gi|91208394|sp|Q65JI5|RIMP_BACLD RecName: Full=Ribosome maturation factor rimP
 gi|52003477|gb|AAU23419.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
 gi|317391704|gb|EFV72501.1| hypothetical protein HMPREF1012_01218 [Bacillus sp. BT1B_CT2]
          Length = 157

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 82/156 (52%), Gaps = 6/156 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +S ++QP+++ +    V I  ++E     L++F++ DDG + + +C ++S+A+S  
Sbjct: 5   VIDTVSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDDG-VDIEECAKVSEALSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I+ +Y LEVSSPG +RP+ +++DF++  G  V  +        ++  G++    
Sbjct: 64  LDEADPIKQNYFLEVSSPGAERPLKKEADFMKALGKNVYIKTYEPIEGNKEFEGELSAFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +    +  +      I I +D +  ARL V+
Sbjct: 124 GENVEVTVMIKTRRK----TINIPYDKVAKARLAVS 155


>gi|169831085|ref|YP_001717067.1| hypothetical protein Daud_0922 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|226696028|sp|B1I359|RIMP_DESAP RecName: Full=Ribosome maturation factor rimP
 gi|169637929|gb|ACA59435.1| protein of unknown function DUF150 [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 154

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISP 78
            +AG +  + +P+ E      V++  + E     L++F+++  G + L DCE +S+ +  
Sbjct: 5   DIAGRVEEMARPLAERKGLELVEVQYVTEGGRRYLRVFLDKP-GGINLDDCEAVSRELDR 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + I   Y LEVSSPG++RP+ R  D++R+ G +V          ++K  G++MG+
Sbjct: 64  ALDDVDFIPHSYVLEVSSPGLERPLKRAEDYVRFKGRLVQINTYAPLNGRKKFSGRLMGS 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            E G  +                I +D +  ARL V
Sbjct: 124 GEEGVTILL-------GEHELATIPWDQISKARLAV 152


>gi|209694188|ref|YP_002262116.1| hypothetical protein VSAL_I0596 [Aliivibrio salmonicida LFI1238]
 gi|226707769|sp|B6ENE0|RIMP_ALISL RecName: Full=Ribosome maturation factor rimP
 gi|208008139|emb|CAQ78281.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 151

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 80/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +  + +  V +  +    +  L++F++ ++G + + DC E S+ IS
Sbjct: 2   TGLERQLTEMLEAPVGALGYELVGLEFIRAGEHSTLRVFIDHENG-IFVEDCAEASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + +   +++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILD 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +     +  +   E          +  ++  A L+
Sbjct: 121 INGEIVTVTVDGNNE--------EFALSNISKANLV 148


>gi|225181380|ref|ZP_03734824.1| protein of unknown function DUF150 [Dethiobacter alkaliphilus AHT
           1]
 gi|225167961|gb|EEG76768.1| protein of unknown function DUF150 [Dethiobacter alkaliphilus AHT
           1]
          Length = 151

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 9/155 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +A  ++++  P+ E++ F  V +  ++E   ++L++F++R+ G +TL  C+E+S A+S 
Sbjct: 3   NIAERVTAIADPLAEKLGFELVDVEYVKEGSQMILRVFIDRE-GGITLDHCQEMSHALSD 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + IE  Y LEVSSPGI+RP+ +  DF+R+ G  V+ ++      K+K  G + G 
Sbjct: 62  ELDRVDPIEQSYHLEVSSPGIERPLKKDEDFVRFAGKPVSIKLFAPLEGKKKYGGILRGL 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            E    LE E       N   + I    +  A L 
Sbjct: 122 EEGEILLEVE-------NNNLVRIPRTQVAKANLA 149


>gi|284006666|emb|CBA71928.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 150

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 80/153 (52%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++S+I   +E + F  V +  +  +   L+++++ ++G +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTSMISVPVEALGFEFVGLEFIRARVSTLRVYIDNENG-VTVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LE+SSPG++RP+   + + R+ G  V   + ++  +++K  G I   ++
Sbjct: 63  DVEDPISVLYNLEISSPGLERPLFTVAHYQRFIGKEVNLILRIAMQNRRKWQGIIKAVND 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  + + E          +  ++  A L+
Sbjct: 123 EMITVTVDGKDEV--------FALKNIQKANLV 147


>gi|226329685|ref|ZP_03805203.1| hypothetical protein PROPEN_03595 [Proteus penneri ATCC 35198]
 gi|225202871|gb|EEG85225.1| hypothetical protein PROPEN_03595 [Proteus penneri ATCC 35198]
          Length = 152

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 81/158 (51%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   +++++   +E + F  V +  +  +   L+I+++ +DG +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMVSAPVEALGFEFVGLEFIRGRESTLRIYIDSEDG-ITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I+  Y LE+SSPG++RP+   + + ++ G   A  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPIQTVYNLEISSPGLERPLFTATHYEQFIGEEAAIVLRIAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +     +  + + E          +  ++  A L+
Sbjct: 120 KSVAGEMITVTVDGKDEV--------FALSNIQKANLV 149


>gi|15599940|ref|NP_253434.1| hypothetical protein PA4746 [Pseudomonas aeruginosa PAO1]
 gi|107103845|ref|ZP_01367763.1| hypothetical protein PaerPA_01004916 [Pseudomonas aeruginosa PACS2]
 gi|116052893|ref|YP_793210.1| hypothetical protein PA14_62780 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152986446|ref|YP_001350788.1| hypothetical protein PSPA7_5464 [Pseudomonas aeruginosa PA7]
 gi|218893841|ref|YP_002442710.1| hypothetical protein PLES_51311 [Pseudomonas aeruginosa LESB58]
 gi|254238518|ref|ZP_04931841.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254244352|ref|ZP_04937674.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296391573|ref|ZP_06881048.1| hypothetical protein PaerPAb_25623 [Pseudomonas aeruginosa PAb1]
 gi|313109727|ref|ZP_07795667.1| hypothetical protein PA39016_002040024 [Pseudomonas aeruginosa
           39016]
 gi|34223065|sp|Q9HV53|RIMP_PSEAE RecName: Full=Ribosome maturation factor rimP
 gi|122257096|sp|Q02FS6|RIMP_PSEAB RecName: Full=Ribosome maturation factor rimP
 gi|167013034|sp|A6VCK3|RIMP_PSEA7 RecName: Full=Ribosome maturation factor rimP
 gi|226707668|sp|B7V1F8|RIMP_PSEA8 RecName: Full=Ribosome maturation factor rimP
 gi|9951008|gb|AAG08132.1|AE004888_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115588114|gb|ABJ14129.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170449|gb|EAZ55960.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126197730|gb|EAZ61793.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|150961604|gb|ABR83629.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
 gi|218774069|emb|CAW29885.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
 gi|310882169|gb|EFQ40763.1| hypothetical protein PA39016_002040024 [Pseudomonas aeruginosa
           39016]
          Length = 152

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + +    +  + + ++ +L+++++R +G + + DCE +S+ +S ILD
Sbjct: 6   EQLQALLAPVVEALGYECWGVEFISQGRHSVLRVYIDRPEG-ILIDDCEAVSRQVSGILD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I G Y LEVSSPG+DRP+     F +  G  V   +      ++   G + G  E 
Sbjct: 65  VEDPISGEYTLEVSSPGMDRPLFTLEQFAKHAGEQVKIRLRSPYEGRRNYQGILRGVEEQ 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +  +          +  +  DS+  A +I
Sbjct: 125 DVVVLVDDH--------EYLLPIDSIDKANII 148


>gi|261820126|ref|YP_003258232.1| hypothetical protein Pecwa_0806 [Pectobacterium wasabiae WPP163]
 gi|261604139|gb|ACX86625.1| protein of unknown function DUF150 [Pectobacterium wasabiae WPP163]
          Length = 140

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +  + +  V I  +  +   L+I+++ +DG +T+ DC ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVAALGYELVGIEFIRSRQSTLRIYIDSEDG-ITVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG++RP+     +L + G  V   + ++  +++K +G I         +  
Sbjct: 60  VAYNLEVSSPGLERPLFTAEHYLHFIGEEVTVVLRMAVQNRRKWLGVINAVDGEMITITV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|167856226|ref|ZP_02478961.1| hypothetical protein HPS_08460 [Haemophilus parasuis 29755]
 gi|259585812|sp|B8F3J3|RIMP_HAEPS RecName: Full=Ribosome maturation factor rimP
 gi|167852646|gb|EDS23925.1| hypothetical protein HPS_08460 [Haemophilus parasuis 29755]
          Length = 153

 Score =  177 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   I+ M F  V +        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLQELVADPIDAMGFELVGVECQRAGRFLTVRLYIDKE-GGVTVDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  G+++   
Sbjct: 63  FDVEDPIADKYNLEVSSPGLDRPLFTLAHYQRFVGREIVVHLRIPMLDRRKWQGELVSVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L+ +   +        A +F ++  A LI
Sbjct: 123 GDLITLKVDGNLQ--------AFAFGNIQKANLI 148


>gi|295706247|ref|YP_003599322.1| hypothetical protein BMD_4142 [Bacillus megaterium DSM 319]
 gi|294803906|gb|ADF40972.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 156

 Score =  177 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  ++ P++EEM+   V+I  ++E K+  L++F++ D G + + DC  +S+ +S 
Sbjct: 4   NVKQTVEEMVSPILEEMNLELVEIEYVKEGKDWFLRVFIDSDTG-VDIEDCGAVSEKLSE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +D  + I  +Y LEVSSPG +RP+ +  DF R  G  V  +        ++  G++   
Sbjct: 63  KMDAVDPIPHNYFLEVSSPGAERPLKKDKDFERAIGKHVYIKTYEPIEGAKEFEGELQSF 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 L    +         + + +D +  ARL +
Sbjct: 123 DGETVTLSIRIKTRTK----TVVLPYDKVAFARLAI 154


>gi|92115191|ref|YP_575119.1| hypothetical protein Csal_3076 [Chromohalobacter salexigens DSM
           3043]
 gi|122419134|sp|Q1QSY8|RIMP_CHRSD RecName: Full=Ribosome maturation factor rimP
 gi|91798281|gb|ABE60420.1| protein of unknown function DUF150 [Chromohalobacter salexigens DSM
           3043]
          Length = 153

 Score =  177 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 10/155 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
                + ++I+PV+  M F    +  L + K+  L I++E  DG +T+ DC  +S+ +S 
Sbjct: 3   NKDAALKALIEPVVTAMGFELWGVDYLSQGKHSRLVIYIESADG-VTVDDCAAVSRQVSG 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G YRLEVSSPG+DRP+     F  + G  V  ++      ++K  G++ G 
Sbjct: 62  VLDVEDPISGEYRLEVSSPGMDRPLFTLEQFASFKGSHVKVKLSTPFEGRRKFQGQLAGV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 L  + +        +     +S+  AR++
Sbjct: 122 EGDEILLHLDGQ--------EYCFPIESIEQARVV 148


>gi|254507524|ref|ZP_05119658.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
 gi|219549594|gb|EED26585.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
          Length = 151

 Score =  177 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 80/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++ ++G + + DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDHENG-INVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  +   E          +  ++  A LI
Sbjct: 121 VDGETISVTVDGNEE--------EFALSNISKANLI 148


>gi|297584077|ref|YP_003699857.1| hypothetical protein Bsel_1784 [Bacillus selenitireducens MLS10]
 gi|297142534|gb|ADH99291.1| protein of unknown function DUF150 [Bacillus selenitireducens
           MLS10]
          Length = 156

 Score =  177 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 6/156 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  + +P++ E     V I  ++E KN  L++F++  +G + L  C  +S+ +S 
Sbjct: 4   AITDKVEKLAEPIVSEAGLELVDIEFVKEGKNWFLRVFIDGPEG-VDLDHCSTVSERLSE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + IE  Y LEVSSPG +RP+ +  D  +  G  V         D++   GK++G 
Sbjct: 63  KLDQSDPIEQAYYLEVSSPGAERPLKKAEDITKAIGKNVHVATYAPIEDEKVFEGKLIGF 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +E++ +        Q+ I +D +  ARL V
Sbjct: 123 DGETLTVEQKIKTRV----SQVEIPYDKVSKARLAV 154


>gi|89895267|ref|YP_518754.1| hypothetical protein DSY2521 [Desulfitobacterium hafniense Y51]
 gi|122482374|sp|Q24UI2|RIMP_DESHY RecName: Full=Ribosome maturation factor rimP
 gi|89334715|dbj|BAE84310.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 152

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + ++I PVI E     V +  ++E  +  L+I+++++ G + + DC  +S  +S 
Sbjct: 4   SIMEQVEAIIAPVITEQGLELVDVEYVKEGAHWYLRIYIDKE-GGVDIDDCTNVSHLVSE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I   Y LEVSSPG++RP+ +  DF R+ G +V      +    ++  G ++G 
Sbjct: 63  VLDKHDPIAQAYMLEVSSPGLERPLKKDEDFERFTGKLVRVLTKEAYQGYKEFTGYLVGL 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            E    LE EK          +AI    +  A L
Sbjct: 123 IEDDIVLEYEKEK--------MAIPRAIVDKANL 148


>gi|307546729|ref|YP_003899208.1| hypothetical protein HELO_4139 [Halomonas elongata DSM 2581]
 gi|307218753|emb|CBV44023.1| K09748 hypothetical protein [Halomonas elongata DSM 2581]
          Length = 153

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 10/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++++I+PV+  M F    I  L + K+  L IF++ + G + + DC ++S+ +S +LDVE
Sbjct: 8   LNALIEPVVTAMGFELWGIDYLSQGKHSRLVIFIDHEQG-VGVDDCADVSRQVSAVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G YRLEVSSPG+DRP+     F R+ GH VA ++      ++K  G + G      
Sbjct: 67  DPIAGEYRLEVSSPGMDRPLFTLEQFERYAGHTVAVKLRAPFDGRRKFQGLLAGIEGDEV 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            L+ +          +     +S+  AR++
Sbjct: 127 LLQLDGE--------EYCFPIESIDQARIV 148


>gi|269961978|ref|ZP_06176333.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833301|gb|EEZ87405.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 151

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E   +  V +  +    +  L+I+++ ++G + +  C E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEASGYELVGLEFIRAGAHSTLRIYIDHENG-INVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWAGIIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 VDGETIAVTVDGQQE--------EFALSNISKANLI 148


>gi|239997163|ref|ZP_04717687.1| hypothetical protein AmacA2_22177 [Alteromonas macleodii ATCC
           27126]
          Length = 152

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 84/156 (53%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++P +E + F  V I  +   K+ +L++F++ ++G +T+ DC ++S  +S I
Sbjct: 4   LEEKLTEMLEPGVEALGFELVGIEFVRAGKHSILRVFIDHENG-ITVDDCADVSHQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+ ++  ++   G VV   + +   D++   GK++   
Sbjct: 63  LDVEDPISTEYNLEVSSPGMDRPLFKEKHYIESVGEVVQIRLSMPMDDRRNFKGKVLACE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E + +        Q  ++  ++    ++ T
Sbjct: 123 NGIVSIEVDGQ--------QFQLAVANIEKGNVVPT 150


>gi|319649524|ref|ZP_08003680.1| hypothetical protein HMPREF1013_00284 [Bacillus sp. 2_A_57_CT2]
 gi|317398686|gb|EFV79368.1| hypothetical protein HMPREF1013_00284 [Bacillus sp. 2_A_57_CT2]
          Length = 155

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 82/155 (52%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P+++E++   V I  ++E K+  L++F++++ G + + +C  +S+ +S  
Sbjct: 4   VTETVEQLVTPIVDELNLELVDIEYVKEGKDWFLRVFIDKETG-VDIEECGTVSERLSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ I  +Y LEVSSPG +RP+ + SDF++  G  V  +       ++   G +    
Sbjct: 63  LDAEDPIPYNYFLEVSSPGAERPLKKDSDFVKAVGKNVFIKTYEPIDGEKTFEGVLTQFD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +E   +  K     +I I ++ + +ARL V
Sbjct: 123 GETVTVEVTIKTRKK----RIEIPYEKVANARLAV 153


>gi|84778873|dbj|BAE73650.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 140

 Score =  177 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  +   L+I++  D+G +T+ DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRQSTLRIYINSDEG-ITVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+   + + ++ G  V+  + ++  +++K  G I         +  
Sbjct: 60  VAYSLEVSSPGLDRPLFTAAHYRQFIGSDVSVVLRIAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           + + E          +  ++  A L+
Sbjct: 120 DGKDEV--------FALQNIQKANLV 137


>gi|262042728|ref|ZP_06015882.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039953|gb|EEW41070.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 140

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++   +E + F  V I  +  +   L+I+++ +DG + + DC ++S  +S ++DVE+ I 
Sbjct: 1   MLTAPVEALGFELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVMDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++KL G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKLQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|114329059|ref|YP_746216.1| hypothetical protein GbCGDNIH1_2395 [Granulibacter bethesdensis
           CGDNIH1]
 gi|122325995|sp|Q0BPF9|RIMP_GRABC RecName: Full=Ribosome maturation factor rimP
 gi|114317233|gb|ABI63293.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1]
          Length = 178

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 97/176 (55%), Gaps = 9/176 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQ 74
                L   I+ +I P + +M F  V++++L  +   +QI  +R DG+ + + DCE +S 
Sbjct: 3   VAQTPLEQRIAGLIAPGLADMGFELVRVAVLGREQPTVQIMADRADGSLIGIDDCEAISH 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLIG 133
           A   +LDVE++I+  + LEVSS GIDRP+ R  D++R+ GH+   E+ +   G +++  G
Sbjct: 63  AAGALLDVEDVIQSTWNLEVSSAGIDRPLTRVKDWVRFAGHLAKVEMSIPGPGGRRRFSG 122

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
            ++G  ET   L  +          ++++  D L  A+L++TD L+ A+  + G  
Sbjct: 123 TVLGADETAARLRLDD-------GEEVSLPMDGLKKAKLVLTDALIDATAQDAGVA 171


>gi|152976183|ref|YP_001375700.1| hypothetical protein Bcer98_2469 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189039695|sp|A7GRE7|RIMP_BACCN RecName: Full=Ribosome maturation factor rimP
 gi|152024935|gb|ABS22705.1| protein of unknown function DUF150 [Bacillus cytotoxicus NVH
           391-98]
          Length = 156

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 6/159 (3%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAI 76
           D  +   + ++ QP++EE++   V +  ++E K+  L++F++ + G + + +C  +S+ +
Sbjct: 2   DKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSETG-VDIEECGAVSERL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++
Sbjct: 61  SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLL 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               T   L    +  K     +I I  D + +ARL VT
Sbjct: 121 SYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|258620311|ref|ZP_05715349.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258624682|ref|ZP_05719616.1| UPF0090 protein [Vibrio mimicus VM603]
 gi|262163945|ref|ZP_06031684.1| UPF0090 domain-containing protein [Vibrio mimicus VM223]
 gi|262172283|ref|ZP_06039961.1| UPF0090 domain-containing protein [Vibrio mimicus MB-451]
 gi|258582969|gb|EEW07784.1| UPF0090 protein [Vibrio mimicus VM603]
 gi|258587190|gb|EEW11901.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|261893359|gb|EEY39345.1| UPF0090 domain-containing protein [Vibrio mimicus MB-451]
 gi|262027473|gb|EEY46139.1| UPF0090 domain-containing protein [Vibrio mimicus VM223]
          Length = 151

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++ ++G +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENG-ITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 IEGETVAVMVDGQEE--------HFALSNISKANLI 148


>gi|90409005|ref|ZP_01217135.1| hypothetical protein PCNPT3_10746 [Psychromonas sp. CNPT3]
 gi|90309890|gb|EAS38045.1| hypothetical protein PCNPT3_10746 [Psychromonas sp. CNPT3]
          Length = 152

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 77/155 (49%), Gaps = 10/155 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +  P +E++ +  V I      K+ +L+++++++ G + + DC  +S+ IS 
Sbjct: 3   SLEQRLTDMFTPSVEDLGYELVGIEYTRAGKHSILRVYIDQEAG-ILVDDCAAVSRQISA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++DVE+ I   Y LEVSSPG++RP+   + +  + G  V  ++ +   ++++  G I   
Sbjct: 62  LMDVEDPITNEYTLEVSSPGLERPLFSATHYQAFVGSKVKIQLRMPIQNRRRWKGMIESV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 +  +   E+         +  ++  A ++
Sbjct: 122 EGEIISVNVDGTLER--------FALSNIQKANIV 148


>gi|26991397|ref|NP_746822.1| hypothetical protein PP_4714 [Pseudomonas putida KT2440]
 gi|148549781|ref|YP_001269883.1| hypothetical protein Pput_4579 [Pseudomonas putida F1]
 gi|259586189|sp|A5W989|RIMP_PSEP1 RecName: Full=Ribosome maturation factor rimP
 gi|24986466|gb|AAN70286.1|AE016669_4 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|148513839|gb|ABQ80699.1| protein of unknown function DUF150 [Pseudomonas putida F1]
 gi|313500622|gb|ADR61988.1| Ribosome maturation factor rimP [Pseudomonas putida BIRD-1]
          Length = 169

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 12/175 (6%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD 60
               +LHS +E            + +++ PV+E + ++   I  + + K+ +L+I+++++
Sbjct: 4   SPIFYLHSMHEG--VQVSSKLEQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE 61

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
            G + + DCE +S+  S ILDVE+ I   Y LEVSSPG+DRP+     F    G  V  +
Sbjct: 62  -GGILVDDCEAVSRQASAILDVEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIK 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +      ++   G + G         +E+     ++  +  +  DS+  A +I +
Sbjct: 121 LRSPFEGRRNFQGLLRGV--------EEQDVVVQVDNQEFLLPIDSIDKANIIPS 167


>gi|119713530|gb|ABL97583.1| hypothetical protein MBMO_EB0-35D03.0046 [uncultured marine
           bacterium EB0_35D03]
          Length = 153

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 8/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  + S+I P I ++ +  + +  +   K+ +L+++++ + G + + DCE +S+ +S I
Sbjct: 4   IADKLFSIINPSINDLGYELLGVEYVSSGKHSVLRLYIDSEKG-IGVDDCETVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I G Y LEVSSPGI+RP+ + + + R+ GH V          ++   G I   S
Sbjct: 63  MDVEDPISGQYNLEVSSPGIERPLFKVAHYQRFLGHDVRLRTYRPLDGRRNFTGAIGSVS 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ET    E             + +  D +  A L+
Sbjct: 123 ETSNTFEL------VTELGPVTLDIDLIEKANLV 150


>gi|308050586|ref|YP_003914152.1| hypothetical protein Fbal_2876 [Ferrimonas balearica DSM 9799]
 gi|307632776|gb|ADN77078.1| protein of unknown function DUF150 [Ferrimonas balearica DSM 9799]
          Length = 151

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++   +E + +    I  +   N   L++F+E ++G +T+ DC  +S+ +  +
Sbjct: 4   MEQRLTEMLSEPVEALGYELWGIQYVRAGNHSTLRLFIEHENG-ITVDDCAAVSRQVGAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     + R+ G      + +    K+K  G+I+   
Sbjct: 63  LDVEDPITTEYNLEVSSPGLDRPLFTAEHYQRYMGSEAVVVLNMPMEGKRKWQGEIVAVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L   ++ +       +A+   ++  A +I
Sbjct: 123 GDMVTLRHNEKDQV------VALP--NVQKAHVI 148


>gi|261212248|ref|ZP_05926534.1| UPF0090 domain-containing protein [Vibrio sp. RC341]
 gi|260838856|gb|EEX65507.1| UPF0090 domain-containing protein [Vibrio sp. RC341]
          Length = 151

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++ ++G +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENG-ITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGFIQA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 IDGETVAVMVDGQEE--------HFALSNISKANLI 148


>gi|254447077|ref|ZP_05060544.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
 gi|198263216|gb|EDY87494.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
          Length = 159

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 86/149 (57%), Gaps = 10/149 (6%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
            S+I+PV++++ +  V +      +  +L ++++RD+G + + DC ++S+ +S +LDVE+
Sbjct: 9   WSLIEPVVQDLGYELVGVDFRANASPAVLCVYIDRDEG-VNIDDCAKISREVSAVLDVED 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPG+DRP+ R+SDF+++ GH+   ++ +   +++   G++ G  +    
Sbjct: 68  PITSAYNLEVSSPGLDRPLFRESDFVKYKGHLAKVKLSIPYEERRNFKGQLNGVEDGMVL 127

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLI 173
           L  +          +  + ++ +  A L+
Sbjct: 128 LIVDNE--------EYLLPYEQIEKANLV 148


>gi|259585829|sp|B3PI94|RIMP_CELJU RecName: Full=Ribosome maturation factor rimP
          Length = 164

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 11/161 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++ +I PV+E +      +  L +     L+IF++   G ++L DCE +S+ IS +LD
Sbjct: 6   ERLTDLIVPVVESLGCELWGLEYLTQGRYTTLRIFIDGPQG-VSLDDCERVSRQISAVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I+G Y LEVSSPG+DRP+  ++ + R+ G  V   + ++   +++  G I    E 
Sbjct: 65  VEDPIDGEYTLEVSSPGLDRPLYTEAQYARYVGETVNLRLRIAVEGRRRFKGVISAIEEG 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT-DELLRA 181
              L+ + +         + +  +++    L+   D++LR 
Sbjct: 125 ALLLQFDNQ--------TVRLPIETIDKGNLVPRYDDILRE 157


>gi|259585711|sp|A0KNE5|RIMP_AERHH RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +  + F    I  +   K+  L+++++ + G +++ +C E+S  +  I
Sbjct: 4   LEQRLTDLLEAPVVALGFELWGIEFIRAGKHSTLRVYIDGEHG-VSVENCAEVSHQVGAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+ + + F ++ G   A  + +++ +++K  G I    
Sbjct: 63  MDVEDPITEEYYLEVSSPGLDRPLFKVAQFEKYVGQEAAVTLRMATNNRRKFKGVIKAVQ 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + + E         ++F ++  A ++
Sbjct: 123 GDMITLTVDGKDEV--------LAFTNIQKANIV 148


>gi|253573563|ref|ZP_04850906.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251847091|gb|EES75096.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 153

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P +EE  F  V +  ++E  N  L++FV+++ G + + DC  +S+ +S  
Sbjct: 6   IKATVEQMVTPYLEENGFELVDVEYVKEGSNWFLRVFVDKE-GGIDIDDCGRISEYLSEK 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LEVSSPG +RP+ +  D  +  G  V           ++  G+++   
Sbjct: 65  LDENDPIPSAYFLEVSSPGAERPLKKAEDVSKAVGKDVFVTTYEPVDGLKEFEGRLLSFD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +E  K+        + AI ++ + SARL +
Sbjct: 125 GDELVVEVGKK--------RHAIPYNKVASARLAI 151


>gi|54307813|ref|YP_128833.1| hypothetical protein PBPRA0610 [Photobacterium profundum SS9]
 gi|90412483|ref|ZP_01220486.1| hypothetical protein P3TCK_13963 [Photobacterium profundum 3TCK]
 gi|51316622|sp|Q6LUJ4|RIMP_PHOPR RecName: Full=Ribosome maturation factor rimP
 gi|46912236|emb|CAG19031.1| conserved hypothetical protein [Photobacterium profundum SS9]
 gi|90326520|gb|EAS42926.1| hypothetical protein P3TCK_13963 [Photobacterium profundum 3TCK]
          Length = 151

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++  +    +  V +  +    +  L++FV+ ++G + + DC E S+ IS
Sbjct: 2   TALEMQLTELLEASVNASGYELVGLEFIRAGEHSTLRVFVDHENG-INVEDCAEASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V   + ++  +++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYHLEVSSPGLERPLFKAAHYQQFVGHEVNLVLKMAMNNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  L+ +   E          +  ++  A LI
Sbjct: 121 VEGELITLKVDGNDE--------TFALSNISKANLI 148


>gi|104780026|ref|YP_606524.1| hypothetical protein PSEEN0793 [Pseudomonas entomophila L48]
 gi|259586182|sp|Q1IF45|RIMP_PSEE4 RecName: Full=Ribosome maturation factor rimP
 gi|95109013|emb|CAK13709.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 169

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 12/175 (6%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD 60
               +LHS +E            + +++ PV+E + ++   I  + + K+ +L+I+++++
Sbjct: 4   SPIFYLHSMHEG--VQVSSKLEQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE 61

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
            G + + DCE +S+  S ILDVE+ I   Y LEVSSPG+DRP+     F    G  V  +
Sbjct: 62  -GGILVDDCEAVSRQASAILDVEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIK 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +      ++   G + G         +E+     ++  +  +  DS+  A +I +
Sbjct: 121 LRTPFEGRRNFQGLLRGV--------EEQDVVVQVDNHEFLLPIDSIDKANIIPS 167


>gi|332306995|ref|YP_004434846.1| hypothetical protein Glaag_2637 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174324|gb|AEE23578.1| protein of unknown function DUF150 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 152

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++   +E + F  V I  +   K+  ++++++  DG +T+  C E+S  +S +
Sbjct: 4   LEQKLTEMLTAPVEALGFEMVGIEFVRAGKHSTMRVYIDHPDG-ITVDHCAEVSHQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP+ +   ++   G VV   + +  GD++   GK++  +
Sbjct: 63  LDVEDPINTEYNLEVSSPGMERPLFKLQHYIDSVGEVVTLRLKMPMGDRRNFKGKLLSEA 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +    +E + +        +  ++F ++    ++ T
Sbjct: 123 DGMLTIEVDNQ--------EFVLAFANIEKGNVVPT 150


>gi|218898969|ref|YP_002447380.1| hypothetical protein BCG9842_B1329 [Bacillus cereus G9842]
 gi|226695927|sp|B7IUH5|RIMP_BACC2 RecName: Full=Ribosome maturation factor rimP
 gi|218540973|gb|ACK93367.1| conserved hypothetical protein [Bacillus cereus G9842]
 gi|326941583|gb|AEA17479.1| hypothetical protein CT43_CH3814 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 156

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 6/159 (3%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +S+ +
Sbjct: 2   DKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAVSERL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++
Sbjct: 61  SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKLL 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               T   L    +  K     +I I  D + +ARL VT
Sbjct: 121 SYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|312869023|ref|ZP_07729200.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
 gi|311095449|gb|EFQ53716.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
          Length = 157

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 8/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++ P+++E  F    I  ++E K+  L++++++ DG +TL DC  +S  +S  
Sbjct: 4   VTETVTDLVTPILDEHHFYLYDIEFVKEGKSWYLRVYIDK-DGGITLDDCATVSDQLSEA 62

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    + I   Y LEVSSPG +RP+  ++D+ R   H +   +      K+   G +M 
Sbjct: 63  LDNVEPDPIPQAYFLEVSSPGAERPLKNEADYQRAVNHYIHVSLYQQIAGKKVYEGTLME 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            S+    L+   +        Q+ I    +  ARL +
Sbjct: 123 LSDKEMTLDFMDKTRHR----QVVIDRSKVAKARLAI 155


>gi|269137761|ref|YP_003294461.1| hypothetical protein ETAE_0403 [Edwardsiella tarda EIB202]
 gi|267983421|gb|ACY83250.1| conserved hypothetical protein [Edwardsiella tarda EIB202]
 gi|304557818|gb|ADM40482.1| hypothetical protein ETAF_0358 [Edwardsiella tarda FL6-60]
          Length = 140

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 72/146 (49%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  ++  L+I+++ ++G +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRHSTLRIYIDSEEG-ITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     +  +    V   + ++  +++K  G I         +  
Sbjct: 60  VAYYLEVSSPGMDRPLFTAEHYTHFLNEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           + + E          +  ++  A L+
Sbjct: 120 DGKDEV--------FALSNVQKANLV 137


>gi|229019011|ref|ZP_04175853.1| hypothetical protein bcere0030_35250 [Bacillus cereus AH1273]
 gi|229025257|ref|ZP_04181677.1| hypothetical protein bcere0029_35590 [Bacillus cereus AH1272]
 gi|228736010|gb|EEL86585.1| hypothetical protein bcere0029_35590 [Bacillus cereus AH1272]
 gi|228742339|gb|EEL92497.1| hypothetical protein bcere0030_35250 [Bacillus cereus AH1273]
          Length = 156

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 6/159 (3%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +S+ +
Sbjct: 2   DKKVTEVVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VDIEECGAVSERL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++
Sbjct: 61  SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKLL 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               T   L    +  K     +I I  D + +ARL VT
Sbjct: 121 SYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|238897564|ref|YP_002923243.1| hypothetical protein HDEF_0333 [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259585781|sp|C4K3F2|RIMP_HAMD5 RecName: Full=Ribosome maturation factor rimP
 gi|229465321|gb|ACQ67095.1| conserved hypothetical protein [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 155

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 9/160 (5%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           R  G   L   +  +I   +E + +  V I  ++ +  +L+I+++ ++G +T+  C ++S
Sbjct: 2   RSVGLSILVKKLKKIITAPVEGLGYELVGIEFIQSRQSVLRIYIDHEEG-VTVDSCADVS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +S +LDVE+ I   Y LE+SSPG+DRP+     + ++ G  V   + ++  +++K  G
Sbjct: 61  KEVSLVLDVEDPITVPYNLEISSPGLDRPLFTARHYAQFIGEKVNLMLRMAIQNQRKWQG 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            I         +   ++ E          +  ++  A L+
Sbjct: 121 IIKSVDGESIIVAVNQKDEV--------FALSNIQKANLV 152


>gi|53804602|ref|YP_113779.1| hypothetical protein MCA1317 [Methylococcus capsulatus str. Bath]
 gi|81682218|sp|Q609B8|RIMP_METCA RecName: Full=Ribosome maturation factor rimP
 gi|53758363|gb|AAU92654.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 150

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 10/155 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   +  +I+PV+  + +    I   + +  +L+++++   G + L DC ++S  +S 
Sbjct: 1   MRMPEHLQRLIEPVVTGLGYELAGIEF-DARARVLRVYIDHPQG-IGLDDCSKVSYQLSG 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y+LE+SSPG+DRP+     F R+ G  V  + + S   +++  G+I G 
Sbjct: 59  MLDVEDPIPGQYQLEISSPGLDRPLFTLEHFKRFTGRRVRLQTLRSLDGQRRFKGEIAGV 118

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 LE +            AI FD +  ARLI
Sbjct: 119 RGDVIDLEDDNGLH--------AIPFDLIDKARLI 145


>gi|145298042|ref|YP_001140883.1| hypothetical protein ASA_1008 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166919114|sp|A4SJR3|RIMP_AERS4 RecName: Full=Ribosome maturation factor rimP
 gi|142850814|gb|ABO89135.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 152

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +  + F    I  +   N   L++F++ ++G +T+ +C E+S  +  I
Sbjct: 4   LEQRLTDLLEAPVVALGFELWGIEFIRAGNHSTLRVFIDGENG-VTVENCAEVSHQVGAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+ + + F ++ G   A ++ +++ +++K  G I    
Sbjct: 63  MDVEDPITEEYFLEVSSPGLDRPLFKVAQFEKYVGQEAAVQLRMATNNRRKFKGVIKAVQ 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + + +         ++F ++  A ++
Sbjct: 123 GDMITLTVDGKDDV--------LAFTNIQKANIV 148


>gi|295696155|ref|YP_003589393.1| protein of unknown function DUF150 [Bacillus tusciae DSM 2912]
 gi|295411757|gb|ADG06249.1| protein of unknown function DUF150 [Bacillus tusciae DSM 2912]
          Length = 154

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +  + +P++E      V +  ++E  N  L++FV+R +G + + DC  +S+ +S  
Sbjct: 6   IAAVVEEIARPIVEGEGLELVDVEYVKEGANWFLRVFVDRPEGGVDIDDCSRVSERLSDR 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I G Y LEVSSPGI+RP+     F R  G  V          ++   G +    
Sbjct: 66  LDEIDPIPGSYFLEVSSPGIERPLKNMPAFRRALGQTVVVTTYEPVQGRKSFQGLLTEVD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           + G  +           ++   I + ++ SAR +
Sbjct: 126 DEGIAVAD--------GDVVWTIPYRAVASARTV 151


>gi|311068182|ref|YP_003973105.1| hypothetical protein BATR1942_06100 [Bacillus atrophaeus 1942]
 gi|310868699|gb|ADP32174.1| hypothetical protein BATR1942_06100 [Bacillus atrophaeus 1942]
          Length = 157

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
             + QP+ + +    V I  ++E  N  L++F++ D+G + + +C ++S+ +S  LD  +
Sbjct: 10  REMAQPIADNLQLELVDIEFVKEGQNWFLRVFIDSDNG-VDIEECAKVSELLSEKLDEAD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I  +Y LEVSSPG +RP+ +K+DF R  G  V  +        +   G++         
Sbjct: 69  PISQNYFLEVSSPGAERPLKKKADFDRSLGKNVYIKTYEPIDGVKVFEGELAEFDGQTVT 128

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +E   +  K     +I I ++ + +ARL V+
Sbjct: 129 VEMTIKTRKK----RINIPYEKIANARLAVS 155


>gi|115372720|ref|ZP_01460026.1| YlxS [Stigmatella aurantiaca DW4/3-1]
 gi|115370201|gb|EAU69130.1| YlxS [Stigmatella aurantiaca DW4/3-1]
          Length = 249

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +     ++++P++       + +  + E+   +L++F+++  G + L +C ++S+A+ P 
Sbjct: 98  VEERAMTLLEPIVAGEGLELIDLEFVREREGWVLRLFIDKPGGRVGLDECSQVSRAVDPA 157

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIMG 137
           LDVE+++   Y LEVSSPG++RP+ + S + R  G  V  +     GD  ++   G +  
Sbjct: 158 LDVEDLVPNEYNLEVSSPGVNRPLKKLSHYERVKGQKVKVKTFGPIGDPPRKNFSGTLTE 217

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  G  +E E  G          I    +  A L
Sbjct: 218 VTAEGIAVEVEGAGA-------FRIPLKDIAKANL 245


>gi|311695960|gb|ADP98833.1| protein belonging to uncharacterized protein family UPF0090 [marine
           bacterium HP15]
          Length = 153

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++QPV+E + +    I    + +  LL++F++  +  + + DCE++S+ IS ++D
Sbjct: 6   KQLEDILQPVVEGLGYEFWGIEFRSQGHHSLLRVFIDDAENGIGVDDCEKVSRQISGVMD 65

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I+  Y LEVSSPG+DRP+ R   +  + GH V   + ++   ++K  G I G    
Sbjct: 66  VEDPIQTEYTLEVSSPGMDRPLFRLEQYEAFVGHQVQIRLRMAFEGRRKFQGLIKGVEG- 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                        +++ +  + FDS+  A ++
Sbjct: 125 -------DDVVVVVDDHEYLLPFDSIEKAHIV 149


>gi|325294241|ref|YP_004280755.1| ribosome maturation factor rimP [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064689|gb|ADY72696.1| Ribosome maturation factor rimP [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 162

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 85/153 (55%), Gaps = 7/153 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P++EE  F  V I  + E    +L+I+ +R +G +T+ DC+ +S+ I  +
Sbjct: 8   IVDRVKELLFPILEEGGFELVDIEFVREPIGWVLRIYADRPEGGITISDCQWISERIGTL 67

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E++I   Y LEVSSPG++RP+  + DF R  G VV  +      +++   G+++  S
Sbjct: 68  LDIEDLIPHAYNLEVSSPGLNRPLKNQRDFERNLGTVVKIKTHEPMDNQRNFKGEVISAS 127

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E+   +    R        ++ I F+++ SAR+
Sbjct: 128 ESAVVIHDVSR------NAEVEIPFENIKSARI 154


>gi|110833188|ref|YP_692047.1| hypothetical protein ABO_0327 [Alcanivorax borkumensis SK2]
 gi|110646299|emb|CAL15775.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 181

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 9/166 (5%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
            H  + P           ++ ++ PV+E++ F    +  ++ +  +L++F++  DG +++
Sbjct: 20  AHFLFVPAERFMSKRTEQLTELLAPVVEDLGFVLWGVEYIQGRGAVLRVFIDHADG-ISV 78

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DC  +S  +S +LDVE+ I G + LEVSSPG+DRPM   + ++ + G  V  +++    
Sbjct: 79  DDCAAVSHEVSGVLDVEDPIPGEFNLEVSSPGMDRPMFDITQYVDYIGEDVQLKLLAPVS 138

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            K+K+   I+        +E +           + + +  +  ARL
Sbjct: 139 GKRKMTAAIVAVDGDTLVVELDGE--------TLRVPYSQVDRARL 176


>gi|332992816|gb|AEF02871.1| hypothetical protein ambt_06680 [Alteromonas sp. SN2]
          Length = 152

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 83/156 (53%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++ P +E + F  V I  +   K+ +L++F++ ++G +++ +C ++S  +S I
Sbjct: 4   LEEKLTEMLNPGVEALGFELVGIEFVRAGKHSILRVFIDHENG-ISVDNCADVSHQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+ ++  ++   G VV   + +   D++   GK++   
Sbjct: 63  LDVEDPISTEYNLEVSSPGMDRPLFKEKHYVDSVGEVVQVRLSMPMDDRRNFKGKVLACD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E + +        Q  ++  ++    ++ T
Sbjct: 123 NGVVSIEVDGQ--------QFQLAVANIEKGNVVPT 150


>gi|259585704|sp|B7GG79|RIMP_ANOFW RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 6/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ P++  M    V I  ++E KN  L++F++   G + +  C  +S+ +S  LD  
Sbjct: 8   VEELVTPIVTHMGLELVDIEYVKEGKNWFLRVFIDSPTG-IDIDQCGVVSEQLSEKLDEI 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ +  DF R  G  V  +       +++  G +        
Sbjct: 67  DPIPHNYFLEVSSPGAERPLKKARDFERAVGKNVYVKTYEPIDGQKEFEGLLTAFDGQT- 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +    +  I I ++ + SARL V
Sbjct: 126 ---VTVEVKVKTKKKTITIPYEKVASARLAV 153


>gi|219669698|ref|YP_002460133.1| hypothetical protein Dhaf_3680 [Desulfitobacterium hafniense DCB-2]
 gi|254800077|sp|B8FR10|RIMP_DESHD RecName: Full=Ribosome maturation factor rimP
 gi|219539958|gb|ACL21697.1| protein of unknown function DUF150 [Desulfitobacterium hafniense
           DCB-2]
          Length = 152

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + ++I PVI E     V +  ++E  +  L+I+++++ G + + DC  +S  +S 
Sbjct: 4   SIMEQVEAIIAPVITEQGLELVDVEYVKEGAHWYLRIYIDKE-GGVDIDDCTNVSHLVSE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I   Y LEVSSPG++RP+ +  DF R+ G +V           ++  G ++G 
Sbjct: 63  VLDKHDPIAQAYMLEVSSPGLERPLKKDEDFERFTGKLVRVLTKEVYQGYKEFTGYLVGL 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            E    LE EK         ++AI    +  A L
Sbjct: 123 IEDDIVLEYEKE--------RMAIPRAIVDKANL 148


>gi|220931625|ref|YP_002508533.1| hypothetical protein Hore_07810 [Halothermothrix orenii H 168]
 gi|259585780|sp|B8CW69|RIMP_HALOH RecName: Full=Ribosome maturation factor rimP
 gi|219992935|gb|ACL69538.1| uncharacterized protein conserved in bacteria [Halothermothrix
           orenii H 168]
          Length = 159

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 7/155 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + QP++E      V +  ++E  N +L++F+E  +G +TL  CE +S+ +   
Sbjct: 4   ITDRVEDLAQPIVESQGLELVDVEYVKEGENRVLRVFIENPEGEVTLDHCENVSKNLDEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I+  Y LEVSSPGI+RP+ +K DF R++G +   +        +++ G I G  
Sbjct: 64  LDEVDPIQESYILEVSSPGIERPLKKKEDFDRFSGKLAYIKTFAPVSGNKEITGIIKGRD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                + K+       ++ ++ I F  +  A L+V
Sbjct: 124 GDNIKVLKKD------DDKELEIPFSQIAKAHLMV 152


>gi|221134837|ref|ZP_03561140.1| hypothetical protein GHTCC_07897 [Glaciecola sp. HTCC2999]
          Length = 165

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++ P  E + F  V +  +   K+ +L++F++  DG +++  C ++SQ  S I
Sbjct: 17  LEKKLTEMLTPAAESLGFEMVGVEFVRAGKHSILRVFIDHPDG-ISVDHCADVSQQASAI 75

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+ + + +    G +VA  + +   +++   G ++   
Sbjct: 76  LDVEDPINTEYNLEVSSPGMDRPLFKTAHYEAIVGEMVAVRLRMPMNERRNFKGTLLSCE 135

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +E + +           ++  ++    L+
Sbjct: 136 NDNIVVEVDGQSY--------TLAIMNIEKGNLV 161


>gi|297580767|ref|ZP_06942693.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535183|gb|EFH74018.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 151

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 83/156 (53%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++ ++G +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDHENG-ITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG+++P+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLEKPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + + E          +  ++  A LI
Sbjct: 121 IDGETVAVMVDGQEE--------HFALSNISKANLI 148


>gi|257865908|ref|ZP_05645561.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257872241|ref|ZP_05651894.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257875535|ref|ZP_05655188.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257799842|gb|EEV28894.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257806405|gb|EEV35227.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257809701|gb|EEV38521.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 157

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 78/157 (49%), Gaps = 8/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++ P+++   F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  
Sbjct: 4   VVETVTDIVTPILDAQKFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEQLSEQ 62

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    + I   Y LEVSSPG +RP+ +++D+ R  G  +   +      +++  G +  
Sbjct: 63  LDQCEPDPIPQAYFLEVSSPGAERPLKKEADYQRAVGEYIHVSLYQPIDGEKQFEGFLQS 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +    +      E +  I   ++  ARL +
Sbjct: 123 FDENQLVI----KTRIKTREKERTIDRKNIAKARLAI 155


>gi|170719905|ref|YP_001747593.1| hypothetical protein PputW619_0719 [Pseudomonas putida W619]
 gi|259586190|sp|B1J268|RIMP_PSEPW RecName: Full=Ribosome maturation factor rimP
 gi|169757908|gb|ACA71224.1| protein of unknown function DUF150 [Pseudomonas putida W619]
          Length = 169

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 12/175 (6%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD 60
               +LHS +E            + +++ PV+E + ++   I  + + K+ +L+I+++++
Sbjct: 4   SPIFYLHSMHEG--VQVSSKLEQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE 61

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
            G + + DCE +S+  S ILDVE+ I   Y LEVSSPG+DRP+     F    G  V  +
Sbjct: 62  -GGILVEDCEAVSRQASAILDVEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIK 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +      ++   G + G         +E+     ++  +  +  DS+  A +I +
Sbjct: 121 LRTPFEGRRNFQGLLRGV--------EEQDVVVQVDSHEFLLPIDSIDKANIIPS 167


>gi|194099045|ref|YP_002002126.1| hypothetical protein NGK_1501 [Neisseria gonorrhoeae NCCP11945]
 gi|193934335|gb|ACF30159.1| UPF0090 protein [Neisseria gonorrhoeae NCCP11945]
          Length = 205

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 13/159 (8%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
                +G + DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S
Sbjct: 54  FFIMYIGSSMDIQTILEKTLPGLGYELVDFELAAQG--TLRVFIDKE-GGITVEDCATVS 110

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             +S +  VE+I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IG
Sbjct: 111 NHLSRVFMVEDI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIG 168

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           KI G       +  + +         + I   ++  ARL
Sbjct: 169 KIEGCENDTVTVSFDGK--------TVQIELGNIDKARL 199


>gi|153814922|ref|ZP_01967590.1| hypothetical protein RUMTOR_01137 [Ruminococcus torques ATCC 27756]
 gi|317500434|ref|ZP_07958658.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089559|ref|ZP_08338458.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847953|gb|EDK24871.1| hypothetical protein RUMTOR_01137 [Ruminococcus torques ATCC 27756]
 gi|316898189|gb|EFV20236.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330404927|gb|EGG84465.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 155

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +++P++  + F  V +  ++E     L+ ++++  G +T+ DCE +S+  S IL
Sbjct: 8   EQKTEELLEPIVSALGFELVDVEYVKEAGTWYLRAYIDKP-GGITVDDCEAVSRKFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I   Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++  G + G  E
Sbjct: 67  DEKDYIPDSYVFEVSSPGLGRPLKKEKDFKRSIGEEVEIRTYRAIDRQKEFTGILKGFDE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   E+  +  +IA+
Sbjct: 127 NTVTIIYEDETEQVFDRAEIAL 148


>gi|163941554|ref|YP_001646438.1| hypothetical protein BcerKBAB4_3639 [Bacillus weihenstephanensis
           KBAB4]
 gi|226705817|sp|A9VT54|RIMP_BACWK RecName: Full=Ribosome maturation factor rimP
 gi|163863751|gb|ABY44810.1| protein of unknown function DUF150 [Bacillus weihenstephanensis
           KBAB4]
          Length = 156

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 6/159 (3%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +S+ +
Sbjct: 2   DKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VEIEECGAVSERL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++
Sbjct: 61  SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMFEGKLL 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                   L    +  K     +I I  D + +ARL VT
Sbjct: 121 SYDGNTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|109898013|ref|YP_661268.1| hypothetical protein Patl_1693 [Pseudoalteromonas atlantica T6c]
 gi|122972050|sp|Q15V74|RIMP_PSEA6 RecName: Full=Ribosome maturation factor rimP
 gi|109700294|gb|ABG40214.1| protein of unknown function DUF150 [Pseudoalteromonas atlantica
           T6c]
          Length = 152

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 82/156 (52%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++   +E + F  V I  +   K+  ++++++  DG +++  C E+S  +S +
Sbjct: 4   LEQKLTEMLTAPVEALGFEMVGIEFVRAGKHSTMRVYIDHPDG-ISVDHCAEVSHQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP+ +   ++   G VV   + +  GD++   GK++  +
Sbjct: 63  LDVEDPINTEYNLEVSSPGMERPLFKLQHYIESVGEVVTLRLKMPMGDRRNFKGKLLSEA 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +    +E + +        +  ++F ++    ++ T
Sbjct: 123 DGMLTIEVDNQ--------EFVLAFANIEKGNVVPT 150


>gi|89098597|ref|ZP_01171479.1| hypothetical protein B14911_00370 [Bacillus sp. NRRL B-14911]
 gi|89086559|gb|EAR65678.1| hypothetical protein B14911_00370 [Bacillus sp. NRRL B-14911]
          Length = 156

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P+++E++   V I  ++E K   L++F++++ G + + +C  +S+ +S  
Sbjct: 4   VTETVEELVTPIVDELNLELVDIEYVKEGKEWFLRVFIDKEQG-VDIEECGLVSERLSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ ++ D+    G  V  +       ++   GK+    
Sbjct: 63  LDELDPIPYNYFLEVSSPGAERPLKKEKDYKSAIGKNVLIKTYEPIDGEKTFEGKLTQFD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E   +         I+I ++ + +ARL VT
Sbjct: 123 GETVTVEVRVKTRIK----TISIPYEKVANARLAVT 154


>gi|184155205|ref|YP_001843545.1| hypothetical protein LAF_0729 [Lactobacillus fermentum IFO 3956]
 gi|227514705|ref|ZP_03944754.1| protein of hypothetical function DUF150 [Lactobacillus fermentum
           ATCC 14931]
 gi|260662295|ref|ZP_05863191.1| UPF0090 protein [Lactobacillus fermentum 28-3-CHN]
 gi|259585802|sp|B2GBN3|RIMP_LACF3 RecName: Full=Ribosome maturation factor rimP
 gi|183226549|dbj|BAG27065.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
 gi|227086909|gb|EEI22221.1| protein of hypothetical function DUF150 [Lactobacillus fermentum
           ATCC 14931]
 gi|260553678|gb|EEX26570.1| UPF0090 protein [Lactobacillus fermentum 28-3-CHN]
          Length = 159

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++++++P++ E +F   ++  ++E K+  L+++++++ G +TL DC  +S 
Sbjct: 1   MSNKTVVETVTALVEPILAEHNFELYEVEFVQEAKSWYLRVYIDKE-GGITLEDCALVSD 59

Query: 75  AISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            +S  LD  +   I   Y LEVSSPG +RP+ ++ D+ R     V   +       +   
Sbjct: 60  QLSEQLDSADPDPIPQAYFLEVSSPGAERPLKKEVDYQRALDQYVNVSLYQQIDGHKVFE 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G +   S     +E   +  +     Q+ I  D +  ARL +
Sbjct: 120 GYLRQLSPDELTIEYMDKTRQK----QVVIPRDKVAKARLAI 157


>gi|16800426|ref|NP_470694.1| hypothetical protein lin1358 [Listeria innocua Clip11262]
 gi|34222948|sp|Q92C33|RIMP_LISIN RecName: Full=Ribosome maturation factor rimP
 gi|16413831|emb|CAC96589.1| lin1358 [Listeria innocua Clip11262]
 gi|313619130|gb|EFR90920.1| conserved hypothetical protein [Listeria innocua FSL S4-378]
          Length = 155

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ +E+    V I+  +E  N  L+IF+++ DG + + +C  +S+ +S  
Sbjct: 4   VLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF    G  V          ++   G ++   
Sbjct: 63  MDESDPITQNYFLEVSSPGAERPLKKEQDFENAVGKYVHVTSYEPIDGRKMWEGTLVSYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   +    +  K    +   I  D +  ARL +
Sbjct: 123 GTTLVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|148976709|ref|ZP_01813396.1| hypothetical protein VSWAT3_19956 [Vibrionales bacterium SWAT-3]
 gi|145964060|gb|EDK29318.1| hypothetical protein VSWAT3_19956 [Vibrionales bacterium SWAT-3]
          Length = 151

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ ++   +    +  V +  +    +  L+I+++  +G + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLDAPVAASGYELVGLEFIRAGEHSTLRIYIDSPNG-INVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ +   + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPISVAYNLEVSSPGLERPLFKAEHYQQFIGHEVSIVLKMAVGNRRKWKGDIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  E + E             ++  A LI
Sbjct: 121 IEGETVKVLVEGQEE--------EFVLSNIAKANLI 148


>gi|157692342|ref|YP_001486804.1| hypothetical protein BPUM_1562 [Bacillus pumilus SAFR-032]
 gi|194014514|ref|ZP_03053131.1| protein YlxS (P15A) [Bacillus pumilus ATCC 7061]
 gi|166979791|sp|A8FDC7|RIMP_BACP2 RecName: Full=Ribosome maturation factor rimP
 gi|157681100|gb|ABV62244.1| hypothetical protein BPUM_1562 [Bacillus pumilus SAFR-032]
 gi|194013540|gb|EDW23105.1| protein YlxS (P15A) [Bacillus pumilus ATCC 7061]
          Length = 157

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 83/156 (53%), Gaps = 6/156 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +S ++QP+++ +    V +  ++E  N  L++F++ D G + + +C ++S+A+S  
Sbjct: 5   VVDVVSEMVQPILDGLQLELVDVEFVKEGQNWFLRVFIDSDKG-VDIEECAKVSEALSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +       ++   G++    
Sbjct: 64  LDEADPISQNYFLEVSSPGAERPLKKKADFEKALGKNVFMKTYEPIDGEKAFEGELTSFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +  + +  K     +I I ++ + +ARL V+
Sbjct: 124 GEIATVTVKIKTRKK----EINIPYEKIANARLAVS 155


>gi|152978791|ref|YP_001344420.1| hypothetical protein Asuc_1119 [Actinobacillus succinogenes 130Z]
 gi|171704316|sp|A6VND8|RIMP_ACTSZ RecName: Full=Ribosome maturation factor rimP
 gi|150840514|gb|ABR74485.1| protein of unknown function DUF150 [Actinobacillus succinogenes
           130Z]
          Length = 151

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F++++ G +++ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQGSVEDLGCELWGIECQRAGRFMTVRLFIDKE-GGVSVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   S + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPITDKYNLEVSSPGLDRPLFTLSQYERFIGEDITIHLRIPVSDRRKWQGKLEKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + + +           F ++  A +I
Sbjct: 123 NDTVTLTVDGQPQV--------FVFGNIQKANII 148


>gi|108761060|ref|YP_630294.1| hypothetical protein MXAN_2065 [Myxococcus xanthus DK 1622]
 gi|122389560|sp|Q1DAM9|RIMP_MYXXD RecName: Full=Ribosome maturation factor rimP
 gi|108464940|gb|ABF90125.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 161

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 14/164 (8%)

Query: 16  FGDMGLAGDISS----VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCE 70
             +  L   +      +++P++       V +  L E+   +L++F+++  G + L +C 
Sbjct: 1   MSEKNLKQTVEERALALLEPIVAGEGLELVDLEFLREREGWVLRLFIDKPGGRVGLDECT 60

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--K 128
           ++S+A+ P LDVE+ I   Y LEVSSPG+DRP+ + + F R  G  V  +     G+  +
Sbjct: 61  QVSRAVDPSLDVEDFIPHEYNLEVSSPGVDRPLRKPTHFERVKGQQVKVKTFGPVGEPPR 120

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +   G +   +  G  +E E  G          I F  +  A L
Sbjct: 121 KNFTGTLTEVAGDGISVEVEGAG-------TFHILFKDIAKANL 157


>gi|332976857|gb|EGK13682.1| protein of hypothetical function DUF150 [Desmospora sp. 8437]
          Length = 170

 Score =  174 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++QP++ E           +E KN +L+++++R DG + L DC  +S+ +  +
Sbjct: 22  VTEAVEEMVQPILAEEGLELYDTEYTKEGKNWILRVYIDRPDGKVDLDDCGRVSERLGEV 81

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ + G Y LEVSSPG +RP+ + + F    G  +          ++K  G +   S
Sbjct: 82  LDREDPLTGQYFLEVSSPGAERPLKKPAHFEAAVGKRIFLNTFEPVDGRKKFEGVLTRYS 141

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +E +        E  + I  + +  ARL++
Sbjct: 142 PESLTVETD--------EGAVEIPTEKVAKARLVL 168


>gi|127513757|ref|YP_001094954.1| hypothetical protein Shew_2829 [Shewanella loihica PV-4]
 gi|126639052|gb|ABO24695.1| protein of unknown function DUF150 [Shewanella loihica PV-4]
          Length = 161

 Score =  174 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 10/161 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEEL 72
           R      L   +  ++   +E +      +  ++  K+ +L+++++ ++G + + DC ++
Sbjct: 7   RGVTLATLESKLEQMLIAPVEALGHSLWGLEYVQAGKHSVLRVYIDNENG-IFIDDCADV 65

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ IS +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V  ++ +     + L 
Sbjct: 66  SRQISAVLDVEDPISTEYTLEVSSPGVDRPLFTAEQYARYLGETVKVQLTMPVAGSRNLK 125

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G + G       L  +          ++ I+ D++    LI
Sbjct: 126 GTVAGVEGQMLTLTVDGN--------ELIIALDNIRKGNLI 158


>gi|229918665|ref|YP_002887311.1| hypothetical protein EAT1b_2952 [Exiguobacterium sp. AT1b]
 gi|259585773|sp|C4L660|RIMP_EXISA RecName: Full=Ribosome maturation factor rimP
 gi|229470094|gb|ACQ71866.1| protein of unknown function DUF150 [Exiguobacterium sp. AT1b]
          Length = 156

 Score =  174 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 6/156 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + S+  P++E  +   V +  ++E  +  L++++++  G + L DC  +++ +S  
Sbjct: 4   ITEVVESIALPIVERENMELVDVEFVKEGPDWFLRVYIDKP-GGVDLDDCVNINEQLSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+  + IE  Y L+VSSPG +RP+ + SDF R  G  V  +        ++  G +    
Sbjct: 63  LNETDPIEQAYYLDVSSPGAERPLKKPSDFERAVGKNVYMKTFAPIDGAKEFEGILTAYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E   +  K      +++  D +  ARL VT
Sbjct: 123 GETVVIETRIKTRKKA----VSLPVDKIAQARLAVT 154


>gi|169827164|ref|YP_001697322.1| hypothetical protein Bsph_1594 [Lysinibacillus sphaericus C3-41]
 gi|226734725|sp|B1HR01|RIMP_LYSSC RecName: Full=Ribosome maturation factor rimP
 gi|168991652|gb|ACA39192.1| UPF0090 protein [Lysinibacillus sphaericus C3-41]
          Length = 156

 Score =  174 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 5/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  + +P+++E++   V I  ++E +N  L+++V+  +G + +  C ++S+ +S +LD +
Sbjct: 8   IEELAKPIVDELNLELVDIEFVKEGRNWFLRVYVDTPEGGIDIDQCAQVSERLSLLLDEK 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ + +DF +  G  +  +      D ++  G +    E   
Sbjct: 68  DPITQNYYLEVSSPGAERPLKKDADFEKAIGKFIYVKTYKPIKDMKEFQGYLTSYEEHTL 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E   +  K    + + I  + +  ARL +
Sbjct: 128 VMEVRIKTRK----ITVTIEQEKIALARLAI 154


>gi|30263820|ref|NP_846197.1| hypothetical protein BA_3954 [Bacillus anthracis str. Ames]
 gi|42782905|ref|NP_980152.1| hypothetical protein BCE_3855 [Bacillus cereus ATCC 10987]
 gi|47529244|ref|YP_020593.1| hypothetical protein GBAA_3954 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47569094|ref|ZP_00239783.1| YlxS-like protein [Bacillus cereus G9241]
 gi|49186667|ref|YP_029919.1| hypothetical protein BAS3668 [Bacillus anthracis str. Sterne]
 gi|49478391|ref|YP_037878.1| hypothetical protein BT9727_3558 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52141671|ref|YP_085158.1| hypothetical protein BCZK3576 [Bacillus cereus E33L]
 gi|165872607|ref|ZP_02217238.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167635806|ref|ZP_02394115.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167639838|ref|ZP_02398107.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170687819|ref|ZP_02879033.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170706785|ref|ZP_02897243.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177652089|ref|ZP_02934635.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190568460|ref|ZP_03021367.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|196036915|ref|ZP_03104299.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196042165|ref|ZP_03109448.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196044678|ref|ZP_03111913.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|206978439|ref|ZP_03239306.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217961237|ref|YP_002339805.1| hypothetical protein BCAH187_A3864 [Bacillus cereus AH187]
 gi|218904945|ref|YP_002452779.1| hypothetical protein BCAH820_3829 [Bacillus cereus AH820]
 gi|222097261|ref|YP_002531318.1| hypothetical protein BCQ_3601 [Bacillus cereus Q1]
 gi|225865796|ref|YP_002751174.1| hypothetical protein BCA_3913 [Bacillus cereus 03BB102]
 gi|227813275|ref|YP_002813284.1| hypothetical protein BAMEG_0677 [Bacillus anthracis str. CDC 684]
 gi|229603147|ref|YP_002868055.1| hypothetical protein BAA_3978 [Bacillus anthracis str. A0248]
 gi|254683476|ref|ZP_05147336.1| hypothetical protein BantC_06445 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254735855|ref|ZP_05193561.1| hypothetical protein BantWNA_11921 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254739619|ref|ZP_05197313.1| hypothetical protein BantKB_01112 [Bacillus anthracis str. Kruger
           B]
 gi|254756008|ref|ZP_05208039.1| hypothetical protein BantV_26379 [Bacillus anthracis str. Vollum]
 gi|254759331|ref|ZP_05211356.1| hypothetical protein BantA9_13571 [Bacillus anthracis str.
           Australia 94]
 gi|301055307|ref|YP_003793518.1| nus operon associated protein [Bacillus anthracis CI]
 gi|34222814|sp|Q81WL9|RIMP_BACAN RecName: Full=Ribosome maturation factor rimP
 gi|51316695|sp|Q732Q5|RIMP_BACC1 RecName: Full=Ribosome maturation factor rimP
 gi|81395111|sp|Q6HEZ8|RIMP_BACHK RecName: Full=Ribosome maturation factor rimP
 gi|81686585|sp|Q636K9|RIMP_BACCZ RecName: Full=Ribosome maturation factor rimP
 gi|226706060|sp|B7JJ95|RIMP_BACC0 RecName: Full=Ribosome maturation factor rimP
 gi|226706064|sp|B7HLF0|RIMP_BACC7 RecName: Full=Ribosome maturation factor rimP
 gi|254765081|sp|B9IVA5|RIMP_BACCQ RecName: Full=Ribosome maturation factor rimP
 gi|254803820|sp|C1EP39|RIMP_BACC3 RecName: Full=Ribosome maturation factor rimP
 gi|254803830|sp|C3P5L9|RIMP_BACAA RecName: Full=Ribosome maturation factor rimP
 gi|254806572|sp|C3L7B0|RIMP_BACAC RecName: Full=Ribosome maturation factor rimP
 gi|259585701|sp|A0RHI8|RIMP_BACAH RecName: Full=Ribosome maturation factor rimP
 gi|30258464|gb|AAP27683.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|42738832|gb|AAS42760.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
 gi|47504392|gb|AAT33068.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47554256|gb|EAL12618.1| YlxS-like protein [Bacillus cereus G9241]
 gi|49180594|gb|AAT55970.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|49329947|gb|AAT60593.1| conserved hypothetical protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51975140|gb|AAU16690.1| conserved hypothetical protein [Bacillus cereus E33L]
 gi|164711639|gb|EDR17185.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167512239|gb|EDR87616.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167528763|gb|EDR91521.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170128203|gb|EDS97072.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170668135|gb|EDT18884.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172082458|gb|EDT67523.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190560464|gb|EDV14442.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|195990470|gb|EDX54454.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196024713|gb|EDX63385.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|196027017|gb|EDX65641.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|206743354|gb|EDZ54794.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217067014|gb|ACJ81264.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|218536944|gb|ACK89342.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|221241319|gb|ACM14029.1| conserved hypothetical protein [Bacillus cereus Q1]
 gi|225790678|gb|ACO30895.1| conserved hypothetical protein [Bacillus cereus 03BB102]
 gi|227005285|gb|ACP15028.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
 gi|229267555|gb|ACQ49192.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
 gi|300377476|gb|ADK06380.1| protein associated with nus operon [Bacillus cereus biovar
           anthracis str. CI]
 gi|324327711|gb|ADY22971.1| ribosome maturation protein RimP [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 156

 Score =  174 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 6/159 (3%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +S+ +
Sbjct: 2   DKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAVSERL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++
Sbjct: 61  SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKML 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               T   L    +  K     +I I  D + +ARL VT
Sbjct: 121 SYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|254361244|ref|ZP_04977387.1| hypothetical protein MHA_0829 [Mannheimia haemolytica PHL213]
 gi|153092740|gb|EDN73783.1| hypothetical protein MHA_0829 [Mannheimia haemolytica PHL213]
          Length = 153

 Score =  174 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE + F  V I        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEDLVLDSIEALGFELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE+ I   Y LEVSSPG+DRP+   + + R+ G  V   + +   D++K  GKI    
Sbjct: 63  FDVEDPIADKYNLEVSSPGLDRPLFTVAHYERFIGQDVVIHLRIPMFDRRKWQGKIKQVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  E    +         +F ++  A L+
Sbjct: 123 GDFITLTVENEDRQ--------FAFGNIQKANLV 148


>gi|90022355|ref|YP_528182.1| hypothetical protein Sde_2710 [Saccharophagus degradans 2-40]
 gi|123395825|sp|Q21H59|RIMP_SACD2 RecName: Full=Ribosome maturation factor rimP
 gi|89951955|gb|ABD81970.1| protein of unknown function DUF150 [Saccharophagus degradans 2-40]
          Length = 151

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 10/155 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +  ++ PV+E +      + L ++ K  LL+IF+E++ G + + DCE +S+ +S 
Sbjct: 3   GKETRLEKMLAPVVESLGCEFWGLELRMQGKQSLLRIFIEKEAG-VGVEDCENVSRQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y LEVSSPG+DRP+     F R+ G  V+  +  +   ++   GK+   
Sbjct: 62  VLDVEDPISGEYTLEVSSPGMDRPLFTLDHFTRFVGEHVSLRLRTAFDGRRNFSGKLTAV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +    L         ++  +  + F+ +  A+++
Sbjct: 122 EDDEVIL--------LIDAEEYILPFELIDKAQVV 148


>gi|52425501|ref|YP_088638.1| hypothetical protein MS1446 [Mannheimia succiniciproducens MBEL55E]
 gi|81386924|sp|Q65SK7|RIMP_MANSM RecName: Full=Ribosome maturation factor rimP
 gi|52307553|gb|AAU38053.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 151

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQQMLQGSVEDLGCELWGIECQRAGRFMTVRLYIDKE-GGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  ++  + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLEQFQRYVGQEISVHLRIPMLDRRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + +        + + +  ++  A +I
Sbjct: 123 GDMLTLIVDDQ--------EQSFALSNIQKANVI 148


>gi|261492532|ref|ZP_05989085.1| hypothetical protein COK_0954 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261496807|ref|ZP_05993181.1| hypothetical protein COI_2524 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261307554|gb|EEY08883.1| hypothetical protein COI_2524 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311691|gb|EEY12841.1| hypothetical protein COK_0954 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 153

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE + F  V I        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEDLVLDSIEALGFELVGIECQRAGRFLTVRLYIDKE-GGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE+ I   Y LEVSSPG+DRP+   + + R+ G  V   + +   D++K  GKI    
Sbjct: 63  FDVEDPIADKYNLEVSSPGLDRPLFTVAHYERFIGQDVVIHLRIPMFDRRKWQGKIKQVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  E    +         +F ++  A L+
Sbjct: 123 GDFITLTVENEDCQ--------FAFGNIQKANLV 148


>gi|299534744|ref|ZP_07048074.1| hypothetical protein BFZC1_01897 [Lysinibacillus fusiformis ZC1]
 gi|298729832|gb|EFI70377.1| hypothetical protein BFZC1_01897 [Lysinibacillus fusiformis ZC1]
          Length = 158

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 81/151 (53%), Gaps = 5/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  + +P+++E++   V I  ++E +N  L+++V+  +G + +  C ++S+ +S +LD +
Sbjct: 8   IEELAKPIVDELNLELVDIEFVKEGRNWFLRVYVDTPEGGIDIDQCAQVSERLSLLLDEK 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  +Y LEVSSPG +RP+ + +DF++  G  +  +      D ++  G +    E   
Sbjct: 68  DPITQNYYLEVSSPGAERPLKKDTDFVKAVGKFIYVKTYEPIKDMKEFQGYLTSYDEHTL 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E   +  K    + + I  + +  ARL +
Sbjct: 128 VMEVRIKTRK----ITVTIEQEKIALARLAI 154


>gi|153876665|ref|ZP_02003868.1| Protein of unknown function DUF150 [Beggiatoa sp. PS]
 gi|152066871|gb|EDN66132.1| Protein of unknown function DUF150 [Beggiatoa sp. PS]
          Length = 144

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +  ++ P+I  + +  V +  L     LL+++++   G + L DCE +S  +S +L
Sbjct: 2   LDNQLQQLLAPIIIGLGYELVGVERLSS--TLLRVYIDHPKG-INLSDCERVSYQVSGVL 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DV+N I+G Y LEVSSPG DRP+     F R+ GH V   +      ++   G +    +
Sbjct: 59  DVQNPIKGRYTLEVSSPGWDRPLFTLEHFKRFVGHKVKVSLRQPKEGQRHFTGLLQAIED 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +          +E +  + ++ +  A L+
Sbjct: 119 RNVIV--------VADETEYCLPYEKIDKAHLV 143


>gi|91228265|ref|ZP_01262201.1| hypothetical protein V12G01_21798 [Vibrio alginolyticus 12G01]
 gi|91188142|gb|EAS74444.1| hypothetical protein V12G01_21798 [Vibrio alginolyticus 12G01]
          Length = 141

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 75/147 (51%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++   +    +  V +  +    +  L+I+++ ++G + + DC E+S  +S +LDVE+ I
Sbjct: 1   MLDAPVAASGYELVGLEFIRAGAHSTLRIYIDHENG-INVDDCAEVSHQVSAVLDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G       + 
Sbjct: 60  SVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHGVDGETVTIT 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            + + E          +  ++  A LI
Sbjct: 120 VDGQQE--------EFALSNISKANLI 138


>gi|157320498|gb|ABV39595.1| protein of unknown function DUF150 [Serratia proteamaculans 568]
          Length = 140

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++   +E + F  V I  +  +   L+I+++ ++G + + DC ++S  +S +LDVE  I 
Sbjct: 1   MLSAPVEALGFELVGIEFIRARQSTLRIYIDSENG-INVDDCADVSHQVSAVLDVEEPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYTRFLGDEVSLVLRMAVQNRRKWQGIIKSVDGEMITVAV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E + E          +  ++  A L+
Sbjct: 120 EGKDEV--------FALSNIQKANLV 137


>gi|30021906|ref|NP_833537.1| hypothetical protein BC3815 [Bacillus cereus ATCC 14579]
 gi|206972652|ref|ZP_03233593.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218235854|ref|YP_002368618.1| hypothetical protein BCB4264_A3915 [Bacillus cereus B4264]
 gi|296504312|ref|YP_003666012.1| hypothetical protein BMB171_C3482 [Bacillus thuringiensis BMB171]
 gi|34222809|sp|Q812X5|RIMP_BACCR RecName: Full=Ribosome maturation factor rimP
 gi|226706108|sp|B7HDU0|RIMP_BACC4 RecName: Full=Ribosome maturation factor rimP
 gi|29897462|gb|AAP10738.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
 gi|206732409|gb|EDZ49590.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218163811|gb|ACK63803.1| conserved hypothetical protein [Bacillus cereus B4264]
 gi|296325364|gb|ADH08292.1| hypothetical protein BMB171_C3482 [Bacillus thuringiensis BMB171]
          Length = 156

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 6/159 (3%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +S+ +
Sbjct: 2   DKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAVSERL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++
Sbjct: 61  SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKLL 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               T   L    +  K     +I IS D + +ARL VT
Sbjct: 121 SYDGTTITLLLTIKTRKK----EIQISMDKVANARLAVT 155


>gi|238918422|ref|YP_002931936.1| hypothetical protein NT01EI_0465 [Edwardsiella ictaluri 93-146]
 gi|238867990|gb|ACR67701.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 140

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  ++  L+I+++ ++G +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRHSTLRIYIDSEEG-ITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG++RP+     + R+    V   + ++  +++K  G I         +  
Sbjct: 60  VAYYLEVSSPGMERPLFIAEHYTRFLNEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           + + E          +  ++  A L+
Sbjct: 120 DGKDEV--------FALSNVQKANLV 137


>gi|288556946|ref|YP_003428881.1| hypothetical protein BpOF4_19750 [Bacillus pseudofirmus OF4]
 gi|288548106|gb|ADC51989.1| hypothetical protein BpOF4_19750 [Bacillus pseudofirmus OF4]
          Length = 156

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++ P+++E++   V +   +E  N  L++F++ D G + L DC ++S+ +S  
Sbjct: 5   VTDIVAELVTPLLDELNLELVDVEFKKEGPNWFLRVFIDSDTG-VDLEDCGKVSEQLSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LEVSSPG +RP+ +  D  +  G  V          ++   G +    
Sbjct: 64  LDEMDPIPQAYFLEVSSPGAERPLKKVKDLEKAVGKNVHVTTYEPVDGEKAFEGMLQSFD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +E + +  K   E    I +D + +ARL +
Sbjct: 124 GEVLTIEVKIKTRKKSYE----IPYDKVANARLAI 154


>gi|146283632|ref|YP_001173785.1| hypothetical protein PST_3312 [Pseudomonas stutzeri A1501]
 gi|145571837|gb|ABP80943.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 182

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNM 64
                   R          + +++ PV+E + ++   I  + + ++ LL+++++  +G +
Sbjct: 19  HFSFVQHARGTSMSSKLEQLQALLAPVVEALGYQCWGIEFISQGRHSLLRVYIDHANG-I 77

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            + DCE++S+ +S +LDVE+ I   Y LEVSSPG+DRP+     ++   G  V  ++   
Sbjct: 78  LIDDCEKVSRQLSGVLDVEDPISVDYTLEVSSPGMDRPLFTIEQYVAHVGDQVKIKLRSP 137

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              ++   G + G  E    +  +          +  +  D +  A +I
Sbjct: 138 FEGRRNFQGLLRGVEEQDVVVLVDDH--------EYLLPIDMIDKANII 178


>gi|315634095|ref|ZP_07889384.1| YhbC family protein [Aggregatibacter segnis ATCC 33393]
 gi|315477345|gb|EFU68088.1| YhbC family protein [Aggregatibacter segnis ATCC 33393]
          Length = 151

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I          +++F++++ G +T+ DC ++S+ +S +
Sbjct: 4   LEQKLQDLLQGSVEDLGCELWGIECQRVGRYLTVRLFIDKE-GGVTVDDCADVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  G++    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAQYTRYVGQEIVVHLRIPVADRRKWQGELAKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +K+        +  ++F ++  A ++
Sbjct: 123 NDMITLIVDKQ--------EQVLAFGNIQKANVV 148


>gi|313623921|gb|EFR94029.1| conserved hypothetical protein [Listeria innocua FSL J1-023]
          Length = 155

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ +E+    V I+  +E  N  L+IF+++ DG + + +C  +S+ +S  
Sbjct: 4   VLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF    G  V          ++   G ++   
Sbjct: 63  MDESDPITQNYFLEVSSPGAERPLKKEQDFENAVGKYVHVTSYEPIDGRKMWEGTLVSYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   +    +  K    +   I  D +  ARL +
Sbjct: 123 GTILVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|78044682|ref|YP_360590.1| hypothetical protein CHY_1770 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|91208344|sp|Q3AB94|RIMP_CARHZ RecName: Full=Ribosome maturation factor rimP
 gi|77996797|gb|ABB15696.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 154

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 10/157 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQA 75
            + G+   +  + + V  E++   V +  ++E     L+I++++D+G + L DC+  S+ 
Sbjct: 3   RNKGIEQKVWPLAERVGGELNLEVVDVEFVKEAGRYFLRIYIDKDEG-VDLDDCQNFSER 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I  ILD E+ I   Y LEVSSPGI+RP+ + +DF ++ G     +   +   +++  GK+
Sbjct: 62  IGVILDEEDPIPQSYYLEVSSPGIERPLKKLADFEKFAGREAQIKTFAAIEGQKQFKGKL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +G  +    +        D  + ++ I  + +  A L
Sbjct: 122 LGVRDGQVVI--------DAGKGEVQIPLEQIAKANL 150


>gi|84387287|ref|ZP_00990308.1| hypothetical protein V12B01_22696 [Vibrio splendidus 12B01]
 gi|86148619|ref|ZP_01066902.1| hypothetical protein MED222_21704 [Vibrio sp. MED222]
 gi|218710447|ref|YP_002418068.1| hypothetical protein VS_2484 [Vibrio splendidus LGP32]
 gi|254765031|sp|B7VJH9|RIMP_VIBSL RecName: Full=Ribosome maturation factor rimP
 gi|84377934|gb|EAP94796.1| hypothetical protein V12B01_22696 [Vibrio splendidus 12B01]
 gi|85833610|gb|EAQ51785.1| hypothetical protein MED222_21704 [Vibrio sp. MED222]
 gi|218323466|emb|CAV19643.1| conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 151

 Score =  173 bits (440), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ ++   +    +  V +  +    +  L+I+++  +G + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLDAPVAASGYELVGLEFIRAGEHSTLRIYIDSPNG-INVDDCSEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ +   + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPISVAYNLEVSSPGLERPLFKAEHYQQFIGHEVSIVLKMAVGNRRKWKGDIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  E + E             ++  A LI
Sbjct: 121 IEGETVKVLVEGQEE--------EFVLSNIAKANLI 148


>gi|291523275|emb|CBK81568.1| Uncharacterized protein conserved in bacteria [Coprococcus catus
           GD/7]
          Length = 154

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 2/141 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +++ P++E   F  V +  ++E  N  L+ ++++++G +T+ DCEE+S+A+S +L
Sbjct: 7   ESRTEAMLMPIVEAKGFELVDVEWVKEGANWYLRAYIDKENG-ITVDDCEEVSRALSDLL 65

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I  +Y LEVSSPG+DRP+ ++ DF R  G  V  ++  +   +++ +G +    E
Sbjct: 66  DEEDFISENYILEVSSPGLDRPLKKEKDFARSIGKDVEVKLFKAINKEKEFVGILKAYDE 125

Query: 141 TGFFLEKEKRGEKDMNELQIA 161
               LE E   E       IA
Sbjct: 126 DTVTLEMEDETEMQFKRSDIA 146


>gi|254721997|ref|ZP_05183786.1| hypothetical protein BantA1_05952 [Bacillus anthracis str. A1055]
          Length = 156

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 6/159 (3%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +S+ +
Sbjct: 2   DKKVTEVVEAFAQPIVEELNLEFVDVEYVKEGQDWFLRVFIDSEKG-VDIEECGAVSERL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK++
Sbjct: 61  SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKML 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               T   L    +  K     +I I  D + +ARL VT
Sbjct: 121 SYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|300721536|ref|YP_003710811.1| hypothetical protein XNC1_0503 [Xenorhabdus nematophila ATCC 19061]
 gi|297628028|emb|CBJ88577.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 140

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 73/146 (50%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V +  +  +   L+++++ ++G +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVEALGFELVGLEFIRARVSTLRVYIDSEEG-ITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+     + R+ G  V   + ++  ++++  G I         +  
Sbjct: 60  VLYNLEISSPGLERPLFTAEHYQRFIGEEVNVVLRMAMQNRRRWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           + + E          +  ++  A L+
Sbjct: 120 DGKDEV--------FALSNIQKANLV 137


>gi|34222833|sp|Q88DV5|RIMP_PSEPK RecName: Full=Ribosome maturation factor rimP
          Length = 158

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + ++   I  + + K+ +L+I+++++ G + + DCE +S+  S ILD
Sbjct: 12  EQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE-GGILVDDCEAVSRQASAILD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 71  VEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKLRSPFEGRRNFQGLLRGV--- 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     ++  +  +  DS+  A +I +
Sbjct: 128 -----EEQDVVVQVDNQEFLLPIDSIDKANIIPS 156


>gi|165936752|ref|ZP_02225319.1| protein YhbC [Yersinia pestis biovar Orientalis str. IP275]
 gi|165915401|gb|EDR34011.1| protein YhbC [Yersinia pestis biovar Orientalis str. IP275]
          Length = 134

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 9/140 (6%)

Query: 34  EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLE 93
           E + +  V I  +  +   L+I+++ DDG +T+  C ++S  +S +LDVE+ I   Y LE
Sbjct: 1   EALGYELVGIEFIRGRQSTLRIYIDSDDG-ITVDACADVSHQVSAVLDVEDPITVAYNLE 59

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEK 153
           VSSPG+DRPM     + R+ G  V   + ++  +++K  G I         +  + + E 
Sbjct: 60  VSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTVDGKDEV 119

Query: 154 DMNELQIAISFDSLLSARLI 173
                    +  ++  A L+
Sbjct: 120 --------FALSNIQKANLV 131


>gi|259586209|sp|A3QGU7|RIMP_SHELP RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   +E +      +  ++  K+ +L+++++ ++G + + DC ++S+ IS +
Sbjct: 4   LESKLEQMLIAPVEALGHSLWGLEYVQAGKHSVLRVYIDNENG-IFIDDCADVSRQISAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V  ++ +     + L G + G  
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYARYLGETVKVQLTMPVAGSRNLKGTVAGVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQMLTLTVDGN--------ELIIALDNIRKGNLI 148


>gi|218288336|ref|ZP_03492635.1| protein of unknown function DUF150 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218241695|gb|EED08868.1| protein of unknown function DUF150 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 157

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 6/160 (3%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  ++ P++E  +   V I   +E KN  L++++++  G + + DC  +S+
Sbjct: 1   MTRDRVTEIVERLVLPIVEREAVELVDIEYTKEGKNWYLRVYIDKP-GGVDIDDCSRVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + I   Y LEVSSPG +RP+ R +DF R  G  V   +       +   G 
Sbjct: 60  QLSEELDRVDPIPNAYFLEVSSPGAERPLKRPADFERAVGRYVHVSLYEPLEGAKTHEGT 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++        LE ++R +     + +A+  + +  ARL +
Sbjct: 120 LVSYDGERLILEIKRRSKT----VTLAVPMEKIAHARLAL 155


>gi|167644003|ref|YP_001681666.1| hypothetical protein Caul_0030 [Caulobacter sp. K31]
 gi|259585739|sp|B0T164|RIMP_CAUSK RecName: Full=Ribosome maturation factor rimP
 gi|167346433|gb|ABZ69168.1| protein of unknown function DUF150 [Caulobacter sp. K31]
          Length = 199

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 6/168 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV E + +  V++ L+       LQI  ER DG+M + DC +LS+AIS ILD  
Sbjct: 11  LVELLDPVAESVGYEIVRLRLMGGAEQRRLQIMAERPDGDMNVEDCAKLSRAISEILDAA 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G Y LEVSSPG+DRP+ R  DF  + G  V  E+   +  +++  G++ G  +   
Sbjct: 71  DPISGEYTLEVSSPGVDRPLTRLKDFETYAGLEVRIELDRVAEGRKRFKGELAGVEDGQV 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            L  E       ++  +   F+ ++ A+L++TD+L++       +  G
Sbjct: 131 GLNLEGE-----DDTTVYFPFEWIVDAKLVLTDQLMKRGAEQRAARVG 173


>gi|258511412|ref|YP_003184846.1| hypothetical protein Aaci_1431 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478138|gb|ACV58457.1| protein of unknown function DUF150 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 157

 Score =  172 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 6/160 (3%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  ++ P++E  +   V I   +E KN  L++++++  G + + DC  +S+
Sbjct: 1   MTRDRVTEIVERLVLPIVEREAVELVDIEYTKEGKNWYLRVYIDKP-GGVDIDDCSRVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + I   Y LEVSSPG +RP+ R +DF R  G  V   +       +   G 
Sbjct: 60  QLSEELDRVDPIPNAYFLEVSSPGAERPLKRPADFERAVGRYVHVSLYEPLMGAKTHEGT 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++        LE ++R +     + +A+  + +  ARL +
Sbjct: 120 LVSYDGERLILEIKRRSKT----VTLAVPMEKIAHARLAL 155


>gi|330830890|ref|YP_004393842.1| ribosome maturation factor rimP [Aeromonas veronii B565]
 gi|328806026|gb|AEB51225.1| Ribosome maturation factor rimP [Aeromonas veronii B565]
          Length = 145

 Score =  172 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 78/150 (52%), Gaps = 10/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++  +  + F    I  +   K+  L+++++ + G +T+ +C E+S  +  I+DVE
Sbjct: 1   MTDLLEAPVVALGFELWGIEFIRAGKHSTLRVYIDGEQG-VTVENCAEVSHQVGAIMDVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+ + + F ++ G   A  + +++ +++K  G I        
Sbjct: 60  DPITEEYYLEVSSPGLDRPLFKVAHFEKYVGQEAAVTLRMATNNRRKFKGVIKAVQGDMI 119

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            L  + + +         ++F ++  A ++
Sbjct: 120 TLAVDGKDDV--------LAFTNIQKANIV 141


>gi|325276163|ref|ZP_08141968.1| ribosome maturation protein RimP [Pseudomonas sp. TJI-51]
 gi|324098700|gb|EGB96741.1| ribosome maturation protein RimP [Pseudomonas sp. TJI-51]
          Length = 152

 Score =  172 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + ++   I  + + K+ +L+I+++++ G + + DCE +S+  S ILD
Sbjct: 6   EQLQALLAPVVEGLGYQCWGIEFVSQGKHSVLRIYIDKE-GGILVDDCEAVSRQASAILD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 65  VEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     ++  +  +  DS+  A +I +
Sbjct: 122 -----EEQDVVVQVDNQEFLLPIDSIDKANIIPS 150


>gi|325569919|ref|ZP_08145913.1| protein of hypothetical function DUF150 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325157042|gb|EGC69210.1| protein of hypothetical function DUF150 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 170

 Score =  172 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 75/151 (49%), Gaps = 8/151 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VE 83
            ++ P+++   F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  LD    
Sbjct: 23  DIVTPILDAQKFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEQLSEQLDQCEP 81

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG +RP+ +++D+ R  G  +   +      +++  G +    E   
Sbjct: 82  DPIPQAYFLEVSSPGAERPLKKEADYQRAVGEYIHVSLYQPIDGEKQFEGFLQSFDENQL 141

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    +      E +  I   ++  ARL +
Sbjct: 142 VM----KTRIKTREKERTIDRKNIAKARLAI 168


>gi|210612464|ref|ZP_03289322.1| hypothetical protein CLONEX_01523 [Clostridium nexile DSM 1787]
 gi|210151572|gb|EEA82579.1| hypothetical protein CLONEX_01523 [Clostridium nexile DSM 1787]
          Length = 169

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++E   F  V +  ++E  N  L+ ++++  G +++ DCE +S+A S IL
Sbjct: 22  EQKTEELLLPIVESNGFELVDVEYVKEGGNWYLRAYIDKP-GGISVDDCEVVSRAFSDIL 80

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++ IG +    +
Sbjct: 81  DEKDYIEDTYIFEVSSPGLGRPLKKEKDFARSIGEEVEIRTYRAIDRQKEFIGILKEYDQ 140

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    K     +IA+
Sbjct: 141 DTVTIEYEDETTKTFERSEIAL 162


>gi|296132884|ref|YP_003640131.1| protein of unknown function DUF150 [Thermincola sp. JR]
 gi|296031462|gb|ADG82230.1| protein of unknown function DUF150 [Thermincola potens JR]
          Length = 153

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++ +  P++E      V +  ++E  +  L++F+++  G ++L DC+ ++Q
Sbjct: 1   MAKSKIEDLVTELAVPIVENAGMELVDVEYVKEGAHWYLRVFIDKPQG-VSLDDCQMIAQ 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            + P+LD ++ I   Y LEVSSPG+DRP+ + +DF R+ G  V          K++ IG+
Sbjct: 60  RLDPLLDEKDPIPHEYMLEVSSPGLDRPLKKPADFARYAGRKVKVSTYAPIDGKKEFIGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  +    +         +     A+  D + S RL
Sbjct: 120 LKGLIDNEVVI--------GICGTDKALPLDKVSSVRL 149


>gi|167035705|ref|YP_001670936.1| hypothetical protein PputGB1_4714 [Pseudomonas putida GB-1]
 gi|189040210|sp|B0KHY0|RIMP_PSEPG RecName: Full=Ribosome maturation factor rimP
 gi|166862193|gb|ABZ00601.1| protein of unknown function DUF150 [Pseudomonas putida GB-1]
          Length = 152

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + ++   I  + + K+ +L+I+++++ G + + DCE +S+  S ILD
Sbjct: 6   EQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDKE-GGILVEDCEAVSRQASAILD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 65  VEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     ++  +  +  DS+  A +I +
Sbjct: 122 -----EEQDVVVQVDNQEFLLPIDSIDKANIIPS 150


>gi|255066626|ref|ZP_05318481.1| hypothetical protein NEISICOT_01636 [Neisseria sicca ATCC 29256]
 gi|255049210|gb|EET44674.1| hypothetical protein NEISICOT_01636 [Neisseria sicca ATCC 29256]
          Length = 189

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 13/159 (8%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
            +F   G   DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S
Sbjct: 38  FLFMYSGRFMDIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVS 94

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             +S +  VE+I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG
Sbjct: 95  NHLSRVFMVEDI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPVDGQKNFIG 152

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +I G       L  + +           I  D++  ARL
Sbjct: 153 RIEGCENDTVTLSFDGK--------TAQIGLDNIDKARL 183


>gi|331016646|gb|EGH96702.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 158

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LD
Sbjct: 12  EQLQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G  E 
Sbjct: 71  VEDPISTEYTLEVSSPGMERPLFTIEQFALYAGEQVRIKLRSPFEGRRNFQGLLRGVEEQ 130

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
              +  E          +  +  D +  A +I T
Sbjct: 131 DVVVHVEDH--------EFLLPIDLIDKANIIPT 156


>gi|149375757|ref|ZP_01893525.1| hypothetical protein MDG893_04092 [Marinobacter algicola DG893]
 gi|149359882|gb|EDM48338.1| hypothetical protein MDG893_04092 [Marinobacter algicola DG893]
          Length = 153

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++E + +    I    + +  LL+IF++  +  + + DCE++S+  S ++D
Sbjct: 6   KQLEELLRPIVEGLGYEFWGIEFRSQGHHSLLRIFIDDAENGIGIEDCEKVSRQASGVMD 65

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I+  Y LEVSSPG+DRP+ R   +  + GH V  ++ ++   ++K  G I G    
Sbjct: 66  VEDPIQTEYTLEVSSPGMDRPLFRLEQYEAFAGHQVQIKLRMAFEGRRKFQGLIKGIEG- 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                        +++ +  + FDS+  A ++
Sbjct: 125 -------DDVVVVVDDHEYLLPFDSIEKANIV 149


>gi|147677600|ref|YP_001211815.1| hypothetical protein PTH_1265 [Pelotomaculum thermopropionicum SI]
 gi|259586176|sp|A5D2U8|RIMP_PELTS RecName: Full=Ribosome maturation factor rimP
 gi|146273697|dbj|BAF59446.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 153

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 14/157 (8%)

Query: 23  GDISSVIQ----PVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +  +++    PV++E     V +   +E     L+IF+++  G + + DC+ +S+ I 
Sbjct: 4   EKVLELVKRVTLPVVQEAGLELVDVEYAKEGGRYYLRIFIDKP-GGVRIEDCQHVSEKID 62

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD  + I   Y LEVSSPGIDRP+ +  D++R+ G +   +       ++K  G+I+G
Sbjct: 63  RLLDELDPIPQSYFLEVSSPGIDRPLKKAGDYIRFAGRLARVKTFSPVEGRRKFTGRIVG 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  ++ E +        +++I F  + SARL V
Sbjct: 123 MHGEDVVMQVEGK--------EMSIPFKQIASARLEV 151


>gi|46907547|ref|YP_013936.1| hypothetical protein LMOf2365_1338 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47093945|ref|ZP_00231682.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|226223922|ref|YP_002758029.1| hypothetical protein Lm4b_01329 [Listeria monocytogenes Clip81459]
 gi|254824620|ref|ZP_05229621.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254852629|ref|ZP_05241977.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254932364|ref|ZP_05265723.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|254993852|ref|ZP_05276042.1| hypothetical protein LmonocytoFSL_13365 [Listeria monocytogenes FSL
           J2-064]
 gi|255521786|ref|ZP_05389023.1| hypothetical protein LmonocFSL_11262 [Listeria monocytogenes FSL
           J1-175]
 gi|300765439|ref|ZP_07075421.1| hypothetical protein LMHG_11499 [Listeria monocytogenes FSL N1-017]
 gi|51316675|sp|Q720A1|RIMP_LISMF RecName: Full=Ribosome maturation factor rimP
 gi|259585784|sp|C1L2M7|RIMP_LISMC RecName: Full=Ribosome maturation factor rimP
 gi|46880815|gb|AAT04113.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017683|gb|EAL08479.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|225876384|emb|CAS05093.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605944|gb|EEW18552.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293583920|gb|EFF95952.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293593858|gb|EFG01619.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300513876|gb|EFK40941.1| hypothetical protein LMHG_11499 [Listeria monocytogenes FSL N1-017]
 gi|328468604|gb|EGF39604.1| ribosome maturation protein RimP [Listeria monocytogenes 1816]
 gi|328475043|gb|EGF45831.1| ribosome maturation protein RimP [Listeria monocytogenes 220]
 gi|332311764|gb|EGJ24859.1| Ribosome maturation factor rimP [Listeria monocytogenes str. Scott
           A]
          Length = 155

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ +E+    V I+  +E  N  L+IF+++ DG + + +C  +S+ +S  
Sbjct: 4   VLEQVEAIVTPITDELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++   G ++   
Sbjct: 63  MDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVSYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   +    +  K    +   I  D +  ARL +
Sbjct: 123 GTTLVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|116872752|ref|YP_849533.1| hypothetical protein lwe1336 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123460990|sp|A0AIC2|RIMP_LISW6 RecName: Full=Ribosome maturation factor rimP
 gi|116741630|emb|CAK20754.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 155

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++++P+  E+    V I+  +E  N  L+IF+++ DG + + +C  +S+ +S  
Sbjct: 4   VLEQVEAIVEPITNELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++   G ++   
Sbjct: 63  MDESDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVSYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   +    +  K    +   I  D +  ARL +
Sbjct: 123 GTTLVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|311030089|ref|ZP_07708179.1| hypothetical protein Bm3-1_06021 [Bacillus sp. m3-13]
          Length = 156

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 6/156 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  +  P+++EM+   V I  ++E +   L++FV+++ G + + DC  +S+ +S 
Sbjct: 4   NVTETVEELALPIVKEMNVELVDIEYVKEGSSWFLRVFVDKE-GGIDIEDCGTVSEKLSE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + I  +Y LEVSSPG +RP+ +K D  +  G  V  +        +   G ++  
Sbjct: 63  KLDELDPIPHNYFLEVSSPGAERPLKKKEDIEKSVGKYVNIKTYEPIDGLKSFEGDLLDF 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 L    +  K     +++I +  +  ARL V
Sbjct: 123 DGETIKLSMTIKTRKK----EVSIPYPKVAKARLAV 154


>gi|312963085|ref|ZP_07777570.1| hypothetical protein PFWH6_5007 [Pseudomonas fluorescens WH6]
 gi|311282596|gb|EFQ61192.1| hypothetical protein PFWH6_5007 [Pseudomonas fluorescens WH6]
          Length = 173

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LD
Sbjct: 27  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLD 85

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 86  VEDPISVEYTLEVSSPGMERPLFTIEQFAKFAGEQVKIKLRSPFEGRRNFQGLLRGV--- 142

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I +
Sbjct: 143 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPS 171


>gi|119774096|ref|YP_926836.1| hypothetical protein Sama_0959 [Shewanella amazonensis SB2B]
 gi|166919003|sp|A1S460|RIMP_SHEAM RecName: Full=Ribosome maturation factor rimP
 gi|119766596|gb|ABL99166.1| protein of unknown function DUF150 [Shewanella amazonensis SB2B]
          Length = 151

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++ P +E   +    I  ++  K+ +L+++++ + G +++ DC + S+ IS I
Sbjct: 4   LETRLAEMLTPAVEAAGYVVWGIEYVQAGKHSILRVYIDSEQG-ISVDDCADASRQISAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISNEYTLEVSSPGLDRPLFNAAQYARYVGEDVKVQLTMPVEGSRNLKGVIDKVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                ++ + +         + ++ D++    +I
Sbjct: 123 GQMLTIKVDGK--------TLVVALDNIRKGNII 148


>gi|16803361|ref|NP_464846.1| hypothetical protein lmo1321 [Listeria monocytogenes EGD-e]
 gi|224499903|ref|ZP_03668252.1| hypothetical protein LmonF1_09559 [Listeria monocytogenes Finland
           1988]
 gi|224501736|ref|ZP_03670043.1| hypothetical protein LmonFR_04337 [Listeria monocytogenes FSL
           R2-561]
 gi|254828681|ref|ZP_05233368.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254829922|ref|ZP_05234577.1| hypothetical protein Lmon1_01135 [Listeria monocytogenes 10403S]
 gi|254898514|ref|ZP_05258438.1| hypothetical protein LmonJ_01825 [Listeria monocytogenes J0161]
 gi|254911995|ref|ZP_05262007.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936322|ref|ZP_05268019.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284801706|ref|YP_003413571.1| hypothetical protein LM5578_1460 [Listeria monocytogenes 08-5578]
 gi|284994848|ref|YP_003416616.1| hypothetical protein LM5923_1413 [Listeria monocytogenes 08-5923]
 gi|315282174|ref|ZP_07870639.1| conserved hypothetical protein [Listeria marthii FSL S4-120]
 gi|34222940|sp|Q8Y7G0|RIMP_LISMO RecName: Full=Ribosome maturation factor rimP
 gi|16410737|emb|CAC99399.1| lmo1321 [Listeria monocytogenes EGD-e]
 gi|258601085|gb|EEW14410.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258608912|gb|EEW21520.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284057268|gb|ADB68209.1| hypothetical protein LM5578_1460 [Listeria monocytogenes 08-5578]
 gi|284060315|gb|ADB71254.1| hypothetical protein LM5923_1413 [Listeria monocytogenes 08-5923]
 gi|293589959|gb|EFF98293.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|313614178|gb|EFR87857.1| conserved hypothetical protein [Listeria marthii FSL S4-120]
          Length = 155

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ +E+    V I+  +E  N  L+IF+++ DG + + +C  +S+ +S  
Sbjct: 4   VLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++   G ++   
Sbjct: 63  MDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVSYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   +    +  K    +   I  D +  ARL +
Sbjct: 123 GTTLVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|217964532|ref|YP_002350210.1| hypothetical protein LMHCC_1249 [Listeria monocytogenes HCC23]
 gi|290893568|ref|ZP_06556551.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|254800006|sp|B8DG06|RIMP_LISMH RecName: Full=Ribosome maturation factor rimP
 gi|217333802|gb|ACK39596.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
 gi|290556913|gb|EFD90444.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|307570902|emb|CAR84081.1| conserved hypothetical protein [Listeria monocytogenes L99]
 gi|313608988|gb|EFR84730.1| conserved hypothetical protein [Listeria monocytogenes FSL F2-208]
          Length = 155

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ +E+    V I   +E  N  L+IF+++ DG + + +C  +S+ +S  
Sbjct: 4   VLEQVEAIVAPITDELQLELVDIVFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++   G ++   
Sbjct: 63  MDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVSYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            T   +    +  K    +   I  D +  ARL +
Sbjct: 123 GTTLVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|148259242|ref|YP_001233369.1| hypothetical protein Acry_0222 [Acidiphilium cryptum JF-5]
 gi|259585658|sp|A5FV18|RIMP_ACICJ RecName: Full=Ribosome maturation factor rimP
 gi|146400923|gb|ABQ29450.1| protein of unknown function DUF150 [Acidiphilium cryptum JF-5]
          Length = 201

 Score =  171 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 47/166 (28%), Positives = 96/166 (57%), Gaps = 9/166 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
            GL G I+ +I P +E + +  V+++++ ++   +QI  +R D   ++L DCE +S  +S
Sbjct: 36  TGLEGRIAELIAPGLESIGYELVRVAIMGKQTPTVQIMADRADQTPLSLDDCERISHLVS 95

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQKLIGKIM 136
            +LDV++ I   + LEVSS GIDRP+ R  D+ R+ GH+   ++ +  +  +++L G ++
Sbjct: 96  AVLDVDDPISSAWTLEVSSAGIDRPLTRVKDWNRYAGHLARIDLDVPTASGRKRLTGTVL 155

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           G  E    ++ +       +   + +    +  A+L++T+EL++A+
Sbjct: 156 GADEAQARVKLD-------SGETVDLPHAHIRRAKLVLTEELIKAT 194


>gi|320354997|ref|YP_004196336.1| hypothetical protein Despr_2912 [Desulfobulbus propionicus DSM
           2032]
 gi|320123499|gb|ADW19045.1| protein of unknown function DUF150 [Desulfobulbus propionicus DSM
           2032]
          Length = 153

 Score =  171 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 85/155 (54%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I    +P++ +M    V++    E    +L+ F++++ G +T+ DC ++S+ IS  
Sbjct: 8   LLTTIQGFAEPLLADMGMELVEVQFRREGHGWVLRFFIDKE-GGITIDDCADVSREISAY 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+VE++I+  Y LEVSSPG++RP+ +K DF R+   ++  ++    G+++ L G ++G  
Sbjct: 67  LEVEDLIDHAYHLEVSSPGLERPLRKKEDFHRFIDRLIRVKLREPLGEQKVLTGTLLGME 126

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L         ++   + I ++++  ARL +
Sbjct: 127 GDTVLL--------ALDSETVRIDWENISKARLTL 153


>gi|258591346|emb|CBE67645.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 153

 Score =  171 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 85/153 (55%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++  P+  E+    V +    E    +L++++++ DG +TL DC+ +S+ +S +
Sbjct: 5   VVERVRAIALPLFTELGLELVDVEFRREAGGWILRLYLDKPDG-VTLDDCQRVSEELSDL 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVENII   Y LEVSSPG++RP++R+SDFLR+ G       + +   +++ +G + G  
Sbjct: 64  LDVENIIHHPYTLEVSSPGLNRPLLRESDFLRFAGQRARVTTLQAVAGQRRFLGVLRGCE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    LE+E           + I + ++  ARL
Sbjct: 124 DGQVLLERED-------GTTVLIPYAAISKARL 149


>gi|73662812|ref|YP_301593.1| hypothetical protein SSP1503 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582354|sp|Q49X50|RIMP_STAS1 RecName: Full=Ribosome maturation factor rimP
 gi|72495327|dbj|BAE18648.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 155

 Score =  171 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 82/155 (52%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++IQPV+ +++F  V++   +E K+  L++ ++++ G + L DC   S+ IS +
Sbjct: 4   ITEQVETIIQPVLNDLNFELVEVEFTKEGKDHFLRVSIDKE-GGVDLNDCALASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D E+ I+  Y L+V+SPG +RP+ ++ DF       V   +       ++ +G +    
Sbjct: 63  MDAEDPIQEMYYLDVASPGAERPIKKEKDFQNAITKPVFVSLYAPIEGSKEWLGILQSVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ET   +E +++ +      QI I  + +  AR  V
Sbjct: 123 ETNIVMEVKEKAKTK----QIEIPRNKIAKARHAV 153


>gi|56963997|ref|YP_175728.1| hypothetical protein ABC2232 [Bacillus clausii KSM-K16]
 gi|81365999|sp|Q5WFT8|RIMP_BACSK RecName: Full=Ribosome maturation factor rimP
 gi|56910240|dbj|BAD64767.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 156

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            ++  +  + +P++ E+    V++   +E  N  L++F++ D G + L DCE +S+ +S 
Sbjct: 4   NVSRTVEQLAEPIVRELHLELVEVEYKKEGPNWYLRVFIDADRG-VNLDDCEAVSEKLSE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPG +RP+ +++D  +  G  V          ++   G ++  
Sbjct: 63  VLDEVDPIKEAYFLEVSSPGAERPLKKEADVKKAVGKGVYVTTYEPIDGQKAFEGVLVSF 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +    +E    G+     +   + +  + +ARL
Sbjct: 123 EDATLVIE----GKNKTRTVTYTVPYAKVANARL 152


>gi|310641592|ref|YP_003946350.1| ribosome maturation factor rimp [Paenibacillus polymyxa SC2]
 gi|309246542|gb|ADO56109.1| Ribosome maturation factor rimP [Paenibacillus polymyxa SC2]
          Length = 153

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + QP ++E  F  V +  ++E  N  L++FV++ DG + L DC  +S+ +   LD  
Sbjct: 10  VEEMAQPYLDEHGFELVDVEYVKEGSNWFLRVFVDK-DGGIDLDDCSMISEYLGQKLDEN 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + +   Y LEVSSPG +RP+ +  D  +  G  V           ++  G+++   +   
Sbjct: 69  DPVSTAYFLEVSSPGAERPLKKAEDVTKAVGKNVFVTTYEPINGLKEFEGRLLSFEDGEL 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++  ++           I +D +  ARL +
Sbjct: 129 TVQSGQKKH--------TIPYDKVAGARLAI 151


>gi|258545584|ref|ZP_05705818.1| BCR/YhbC family protein [Cardiobacterium hominis ATCC 15826]
 gi|258519284|gb|EEV88143.1| BCR/YhbC family protein [Cardiobacterium hominis ATCC 15826]
          Length = 157

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 47/156 (30%), Positives = 85/156 (54%), Gaps = 3/156 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++ +++PV+E M F  V +       N +L+I+V+R +G + +    E+++A++
Sbjct: 1   MSREERVTELLKPVVESMGFEWVGVEYHHNSVNAILRIYVDRPEGGIDMEGVVEVTEAVN 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           PILDVE+ I   Y LEVSSPG+DRP+   +DF+R+ G      +    G +++  G I  
Sbjct: 61  PILDVEDPINAPYTLEVSSPGLDRPLFSFADFVRFTGETAKVHLHAPVGKRRRFEGVIES 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           T ET   +    R  + +    + + + ++  ARL+
Sbjct: 121 TDETAQRITFAVRQGRAVEA--VEVDYANVDKARLV 154


>gi|251792721|ref|YP_003007447.1| hypothetical protein NT05HA_0985 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534114|gb|ACS97360.1| protein YhbC [Aggregatibacter aphrophilus NJ8700]
          Length = 151

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I          +++F++++ G +T+ DC  +S+ +S +
Sbjct: 4   LEQKLQELVQGSVEDLGCELWGIECQRVGRYLTVRLFIDKE-GGVTVEDCAYVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + F R+ G  +   + +   D++K  G++    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLNQFERYLGQEILLHLRIPVADRRKWQGQLAKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + +        +  ++F ++  A +I
Sbjct: 123 NDMITLIVDGK--------EQVLAFGNIQKANVI 148


>gi|294011602|ref|YP_003545062.1| hypothetical protein SJA_C1-16160 [Sphingobium japonicum UT26S]
 gi|292674932|dbj|BAI96450.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 196

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 9/174 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAI 76
           M    +++++I+P ++ + F  V+I L    +   LQI  ER +   + + DC  +S+ +
Sbjct: 23  MADIAELTALIEPEVKALGFDLVRIKLFGSGDEYTLQIMAERPETKQLVIEDCAAISRRL 82

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +LD  + IE  YRLEVSSPGIDRP+ R +DFL W GH        +   ++   G + 
Sbjct: 83  SDVLDEADPIEEAYRLEVSSPGIDRPLTRLTDFLEWAGHEAKIAATETVSGRKSFRGVLK 142

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           G           K G        +AI F  +  A+LI+TD L+ AS+      A
Sbjct: 143 GVEGEDILFADAKAG-------DVAIPFALVGDAKLILTDALIAASMPLSSDGA 189


>gi|259585706|sp|Q0VSS3|RIMP_ALCBS RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 79/151 (52%), Gaps = 9/151 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              ++ ++ PV+E++ F    +  ++ +  +L++F++  DG +++ DC  +S  +S +LD
Sbjct: 5   TEQLTELLAPVVEDLGFVLWGVEYIQGRGAVLRVFIDHADG-ISVDDCAAVSHEVSGVLD 63

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I G + LEVSSPG+DRPM   + ++ + G  V  +++     K+K+   I+     
Sbjct: 64  VEDPIPGEFNLEVSSPGMDRPMFDITQYVDYIGEDVQLKLLAPVSGKRKMTAAIVAVDGD 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +E +           + + +  +  ARL
Sbjct: 124 TLVVELDGE--------TLRVPYSQVDRARL 146


>gi|77457004|ref|YP_346509.1| hypothetical protein Pfl01_0777 [Pseudomonas fluorescens Pf0-1]
 gi|77381007|gb|ABA72520.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 173

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LD
Sbjct: 27  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLD 85

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 86  VEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKLRSPFEGRRNFQGLLRGV--- 142

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     +   +  +  D +  A +I +
Sbjct: 143 -----EEQDVVVQVENHEFLLPIDMIDKANIIPS 171


>gi|220934177|ref|YP_002513076.1| protein of unknown function DUF150 [Thioalkalivibrio sp. HL-EbGR7]
 gi|259645128|sp|B8GP00|RIMP_THISH RecName: Full=Ribosome maturation factor rimP
 gi|219995487|gb|ACL72089.1| protein of unknown function DUF150 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 154

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 10/150 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            + ++++P++  M ++   +     K+  LL++F++ + G +TL DC E+S+ +S ++DV
Sbjct: 2   QLKALLEPLVTRMGYQLWGMEFRVAKHSALLRLFIDSEQG-ITLDDCTEVSRQVSALMDV 60

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I+  Y LEVSSPG+DRP+     + R+ G  V          ++   G I+   E  
Sbjct: 61  EDPIQVPYTLEVSSPGVDRPLFEAGQYARYVGEQVRVRTQWPIDGQRNFAGAIVSADEDS 120

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             L+ + R        ++ +  +++   RL
Sbjct: 121 VTLDVDGR--------EVRLPLEAIARGRL 142


>gi|194467744|ref|ZP_03073730.1| protein of unknown function DUF150 [Lactobacillus reuteri 100-23]
 gi|194452597|gb|EDX41495.1| protein of unknown function DUF150 [Lactobacillus reuteri 100-23]
          Length = 157

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ P++++  F    +  ++E K+  L++++++ DG +TL DC  +S  +S 
Sbjct: 3   SVVETVTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYIDK-DGGITLEDCALVSDELSE 61

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G + 
Sbjct: 62  ALDNVEPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKIYEGTLT 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             S+    L+   +        QI I    +  ARL +
Sbjct: 122 QLSDKEITLDYLDKTRHR----QITIDRQKIAQARLAI 155


>gi|292492784|ref|YP_003528223.1| hypothetical protein Nhal_2769 [Nitrosococcus halophilus Nc4]
 gi|291581379|gb|ADE15836.1| protein of unknown function DUF150 [Nitrosococcus halophilus Nc4]
          Length = 150

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 10/153 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              IS +++PV+  + +  V +  L   K +LL+I+++   G +T+ DCE +S  +S +L
Sbjct: 4   DERISKLVEPVVTALGYELVGVERLSIGKGVLLRIYIDTPLG-VTVDDCERVSHQVSALL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  +   Y LE+SSPG+DRP+  +  F R+ G  V+  +      +++  G + G   
Sbjct: 63  DVEEPMASPYTLEISSPGLDRPLFTEEHFKRFAGAEVSITLSEPLNGRRRFKGLLRGMRG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  E          +  +  + +  ARLI
Sbjct: 123 NCVVILAEGE--------EFELPLEGIRKARLI 147


>gi|299823035|ref|ZP_07054921.1| protein of hypothetical function DUF150 [Listeria grayi DSM 20601]
 gi|299816564|gb|EFI83802.1| protein of hypothetical function DUF150 [Listeria grayi DSM 20601]
          Length = 155

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ EE+    V I+  +E KN  L++FV+R  G + + +C  +S+ +S  
Sbjct: 4   VTDQVEAIVLPITEELGVELVDIAYEKEGKNWFLRVFVDRP-GGIDIDECAAVSEKLSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D ++ I  +Y LEVSSPG +RP+ ++ DF    G  V          ++   G +    
Sbjct: 63  MDEQDPISENYFLEVSSPGAERPLKKEKDFENAVGKYVHVTSYEPIDSRKMWEGTLEAYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +  + +       L   +  + +  ARL +
Sbjct: 123 GEYLTITVKDKTRT----LTCKVPKEKVAKARLAI 153


>gi|120556257|ref|YP_960608.1| hypothetical protein Maqu_3350 [Marinobacter aquaeolei VT8]
 gi|166990772|sp|A1U602|RIMP_MARAV RecName: Full=Ribosome maturation factor rimP
 gi|120326106|gb|ABM20421.1| protein of unknown function DUF150 [Marinobacter aquaeolei VT8]
          Length = 153

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++PV+E + +    I      +   L++F++  +  + + DCE++S+ +S ++D
Sbjct: 6   KQLEDILRPVVEGLGYEFWGIEFRSHGHHSKLRVFIDDAENGIAIDDCEKVSRQVSGVMD 65

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I+  Y LEVSSPG+DRP+ R   +  + GH V  ++ ++   ++K +G I G    
Sbjct: 66  VEDPIQTEYTLEVSSPGMDRPLFRLEQYEAFIGHKVQIKLRMAFEGRRKFLGLIKGVEG- 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                        +++ +  + FDS+  A ++
Sbjct: 125 -------DDVVVVVDDHEYLLPFDSIEKANIV 149


>gi|83644099|ref|YP_432534.1| hypothetical protein HCH_01237 [Hahella chejuensis KCTC 2396]
 gi|83632142|gb|ABC28109.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 173

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 12/162 (7%)

Query: 15  IFGDMGLA--GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEE 71
           + GD  LA   D+  +++PV+E M      +  + + K  LL+I+++++ G + + DCE+
Sbjct: 18  LIGDNLLARKDDLYQLLKPVVEGMGCDFWGMDYIAQGKRSLLRIYIDKESG-VLVDDCEK 76

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ IS ILDVE+ I+G Y LEVSSPG DRP+     +  + G ++   +      ++K 
Sbjct: 77  VSRQISAILDVEDPIKGEYTLEVSSPGWDRPLFNVEQYKAYIGSIIEVRLQAPFNGRRKF 136

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            G +         L+        ++  +     +++  A ++
Sbjct: 137 KGLLAAVENDEIVLQ--------VDAEEFIFPVETIDKANVV 170


>gi|88797621|ref|ZP_01113210.1| hypothetical protein MED297_10726 [Reinekea sp. MED297]
 gi|88779793|gb|EAR10979.1| hypothetical protein MED297_10726 [Reinekea sp. MED297]
          Length = 155

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 83/160 (51%), Gaps = 10/160 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELS 73
           + G +    +++ +I+PV+  M F    +  +   N   L+I+++ +DG + +  C ++S
Sbjct: 1   MVGVLAKIDELTDLIEPVVIGMGFLLWGVEYIPSGNYSTLRIYIDHEDG-IQVDQCADVS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +S +LDVE+ I  +Y LEVSSPG+DRP+     +  + G  V  ++  +   ++K  G
Sbjct: 60  RQVSAVLDVEDPISSNYTLEVSSPGMDRPLFTLEQYAAYIGEWVDIKLRYAFEGRRKFKG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            ++G  +    ++ +K         +  +  +S+   R+I
Sbjct: 120 VLVGIEDGDVIVQVDKE--------EFLLPIESIDRGRII 151


>gi|116333945|ref|YP_795472.1| hypothetical protein LVIS_1339 [Lactobacillus brevis ATCC 367]
 gi|122269371|sp|Q03QT1|RIMP_LACBA RecName: Full=Ribosome maturation factor rimP
 gi|116099292|gb|ABJ64441.1| hypothetical protein LVIS_1339 [Lactobacillus brevis ATCC 367]
          Length = 157

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 78/157 (49%), Gaps = 8/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++++ QP++ +  F  V +  ++E K+  L++++++  G + + +C  +S  +S  
Sbjct: 4   VVETVTALAQPIVAQHQFELVDVEFVKEGKSWYLRLYIDKP-GGINIEECALVSDEVSEK 62

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +D    + I   Y LEVSSPG +RP+ + +DF +  G  +   +    G+ +   G ++ 
Sbjct: 63  MDALDPDPIPQAYFLEVSSPGAERPLKKPADFEKAVGDYIHVSLYQKIGNSKVYEGTLLS 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +     LE   +G        + I  D++  ARL +
Sbjct: 123 LTADSLDLEVNLKGRIK----TLTIPRDAVAQARLAI 155


>gi|125973510|ref|YP_001037420.1| hypothetical protein Cthe_0995 [Clostridium thermocellum ATCC
           27405]
 gi|256003328|ref|ZP_05428319.1| protein of unknown function DUF150 [Clostridium thermocellum DSM
           2360]
 gi|281417713|ref|ZP_06248733.1| protein of unknown function DUF150 [Clostridium thermocellum JW20]
 gi|259585742|sp|A3DE48|RIMP_CLOTH RecName: Full=Ribosome maturation factor rimP
 gi|125713735|gb|ABN52227.1| protein of unknown function DUF150 [Clostridium thermocellum ATCC
           27405]
 gi|255992618|gb|EEU02709.1| protein of unknown function DUF150 [Clostridium thermocellum DSM
           2360]
 gi|281409115|gb|EFB39373.1| protein of unknown function DUF150 [Clostridium thermocellum JW20]
 gi|316940251|gb|ADU74285.1| protein of unknown function DUF150 [Clostridium thermocellum DSM
           1313]
          Length = 154

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 83/154 (53%), Gaps = 2/154 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++ +  PV+ + SF  V +  ++E +   L+I++++  G +T+ DC+ +S+
Sbjct: 1   MTRKEIEEIVTEIANPVVNKHSFELVDVEFIKEGSSWYLRIYIDKP-GGITIDDCQVVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS ILD E+ I   Y LEVSSPG+DRP+ ++SDF R+ G +V  ++      K+   G+
Sbjct: 60  EISDILDKEDPIPHSYFLEVSSPGLDRPLKKESDFERFKGELVEVKVFKPIEGKKIFEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           ++G  +    ++K      +    ++A+    + 
Sbjct: 120 LVGYKDNKIIIKKNGNELMEFERDKVALVRRVIK 153


>gi|229592638|ref|YP_002874757.1| hypothetical protein PFLU5255 [Pseudomonas fluorescens SBW25]
 gi|229364504|emb|CAY52354.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 173

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LD
Sbjct: 27  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLD 85

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 86  VEDPISVEYTLEVSSPGMERPLFTIDQFAKFAGEQVKIKLRSPFEGRRNFQGLLRGV--- 142

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I +
Sbjct: 143 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPS 171


>gi|254427945|ref|ZP_05041652.1| conserved hypothetical protein [Alcanivorax sp. DG881]
 gi|196194114|gb|EDX89073.1| conserved hypothetical protein [Alcanivorax sp. DG881]
          Length = 151

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 79/151 (52%), Gaps = 9/151 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              ++ ++ PV+E++ F    +  ++ +  +L++F++  DG +++ +C  +S  +S +LD
Sbjct: 5   TEQLTELLAPVVEDLGFVLWGVEYIQGRGAVLRVFIDHADG-ISVDNCAAVSHEVSGVLD 63

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I G Y LEVSSPG+DRPM   + ++ + G  V  +++     K+K+   I+     
Sbjct: 64  VEDPISGEYNLEVSSPGMDRPMFEIAQYVDYIGEDVQLKLLAPVSGKRKMTAAIVAVDGD 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +E +           + + +  +  ARL
Sbjct: 124 TLVVELDGE--------TLRVPYSQVDRARL 146


>gi|259503124|ref|ZP_05746026.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259168990|gb|EEW53485.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 171

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 8/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++ P+++E  F    I  ++E K+  L++++++ DG +TL DC  +S  +S  
Sbjct: 18  VTEVVTDLVTPILDEHHFYLYDIEFVKEGKSWYLRVYIDK-DGGITLNDCAAVSDQLSEA 76

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    + I   Y LEVSSPG +RP+  + D+ R   H +   +      K+   G ++ 
Sbjct: 77  LDNVEPDPIPQAYFLEVSSPGAERPLKNEDDYQRAVNHYIHVSLYQQLAGKKVYEGTLVE 136

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            S     L    +        Q+ I    +  ARL +
Sbjct: 137 LSAKEMTLNFMDKTRHR----QVVIDRSKVAQARLAI 169


>gi|322382350|ref|ZP_08056257.1| hypothetical protein PL1_2630 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321153703|gb|EFX46078.1| hypothetical protein PL1_2630 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 153

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 9/156 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  +++  + E  F  V I  ++E  N  L+++V++ +G + + DC  +S+ +S 
Sbjct: 4   SIKSIVEEMMKDYLTENGFELVDIEYVKEGSNWFLRVYVDKLEGGIDIEDCGRISEYLSA 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD ++ I   Y LEVSSPG +RP+ +  D  +  G  V         + ++  G+++  
Sbjct: 64  KLDEKDPIPTAYFLEVSSPGAERPLKKPQDIAKSVGKHVFITTYEPVDNAKEFEGELLSF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 ++  K+          +I ++ + SARL +
Sbjct: 124 DGETLVVKTAKKKS--------SIPYEKVASARLAI 151


>gi|315302975|ref|ZP_07873695.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596]
 gi|313628655|gb|EFR97068.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596]
          Length = 155

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ +E+    V I+  +E  N  L+IF+++ DG + + +C  +S+ +S  
Sbjct: 4   VLDQVEAIVAPITDELHLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF+      V          ++   G +    
Sbjct: 63  MDESDPITQNYFLEVSSPGAERPLKKEQDFVNAISKYVHVTSYEPIDGRKMWEGTLESFD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +    +  K    +   I  D +  ARL +
Sbjct: 123 GETLVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|89095216|ref|ZP_01168139.1| YhbC-like protein [Oceanospirillum sp. MED92]
 gi|89080513|gb|EAR59762.1| YhbC-like protein [Oceanospirillum sp. MED92]
          Length = 151

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 10/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +I+P +  + F    I  L + K+  L+++++ ++G + + DC ++S  +S I+DVE
Sbjct: 8   LHELIEPSVSALGFELWGIEFLSQGKHSTLRVYIDSENG-INVDDCAKVSHQVSGIMDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G+Y LEVSSPG++RP+     F  + G  +   + ++   ++K  G + G      
Sbjct: 67  DPIAGNYTLEVSSPGMERPLFTLEQFAAYAGSEIQIRLRVAFEGRRKFKGVLNGVEGDDV 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +  +          +  +  + +  A +I
Sbjct: 127 LVVVDNE--------EYMLPIEYIDRANII 148


>gi|302389799|ref|YP_003825620.1| protein of unknown function DUF150 [Thermosediminibacter oceani DSM
           16646]
 gi|302200427|gb|ADL07997.1| protein of unknown function DUF150 [Thermosediminibacter oceani DSM
           16646]
          Length = 162

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + + VI +  F  V +  ++E     L+ ++++  G +TL DC+E+S+ IS  
Sbjct: 6   ILKKVWDIGERVIHDRGFELVDVEFVQEAGSWYLRYYIDKP-GGITLDDCQEVSEEISRR 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E+ I   Y LEVSSPG++RP+ ++ DFL++ G  V  ++      K+   G ++   
Sbjct: 65  LDIEDPIPHSYILEVSSPGVERPLKKEKDFLKYIGSEVEIKVFEPIAGKKAFTGTLIDYK 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    L         ++   I I  + + SA+L
Sbjct: 125 DGSVVLR--------VDSSIINIPHEKISSAKL 149


>gi|308068696|ref|YP_003870301.1| hypothetical protein PPE_01927 [Paenibacillus polymyxa E681]
 gi|305857975|gb|ADM69763.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 153

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  + QP ++E  F  V +  ++E  N  L++FV++ DG + L DC  +S+ +   LD  
Sbjct: 10  VEEMAQPYLDEHGFELVDVEYVKEGSNWFLRVFVDK-DGGIDLDDCSMISEYLGQKLDEN 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + +   Y LEVSSPG +RP+ +  D  +  G  V           ++  G+++   +   
Sbjct: 69  DPVSTAYFLEVSSPGAERPLKKAEDVTKAVGKNVFVTTYEPINGLKEFEGRLLSFEDGEL 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++  ++           I +D +  ARL +
Sbjct: 129 TVQSGQKKHV--------IPYDKVAGARLAI 151


>gi|153855239|ref|ZP_01996405.1| hypothetical protein DORLON_02419 [Dorea longicatena DSM 13814]
 gi|149752238|gb|EDM62169.1| hypothetical protein DORLON_02419 [Dorea longicatena DSM 13814]
          Length = 150

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++EE  F  V +  ++E  N  L+ ++++  G + + DCE +S+ +S IL
Sbjct: 3   EQKTEEILLPIVEEYGFELVDVEYVKEGSNWYLRAYIDKP-GGIGVNDCEVVSRRLSDIL 61

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y LEVSSPG+ RP+ ++ DF R  G  V          K++  G +    E
Sbjct: 62  DEKDYIEDSYILEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRMIDRKKEFTGILKDYDE 121

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
           T   +E E   EK   + +IA+
Sbjct: 122 TTVTIEMEDETEKTFEKSEIAL 143


>gi|313633404|gb|EFS00240.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
          Length = 155

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ +E+    V I+  +E  N  L+IF+++ DG + + +C  +S+ +S  
Sbjct: 4   VLDQVEAIVAPITDELHLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF+      V          ++   G +    
Sbjct: 63  MDESDPITQNYFLEVSSPGAERPLKKEQDFVNAVSKYVHVTSYEPIDGRKMWEGTLESFD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +    +  K    +   I  D +  ARL +
Sbjct: 123 GETLVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|206900815|ref|YP_002250929.1| YlxS [Dictyoglomus thermophilum H-6-12]
 gi|259585753|sp|B5YEH1|RIMP_DICT6 RecName: Full=Ribosome maturation factor rimP
 gi|206739918|gb|ACI18976.1| YlxS [Dictyoglomus thermophilum H-6-12]
          Length = 156

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  +++P+ E+ S+  V +    E    +L++++++  G +T+ DC  LS+ IS
Sbjct: 7   MEFYKKLKEIVEPICEKYSYELVDLEYRREPHGWVLRVYIDKV-GGVTVEDCAYLSEKIS 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+++ I   Y LEVSSPG+DRP+ RK DF R  G  V   ++     K+K  GKI  
Sbjct: 66  KELDIKDPIPHSYILEVSSPGLDRPLKRKRDFERHMGEKVNITLLEEIEGKKKFEGKIFK 125

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E+   L         +++  + I  + +  A LIV
Sbjct: 126 VDESSVTL--------KIDDSFVTIPLEKIKKAMLIV 154


>gi|325578297|ref|ZP_08148432.1| YhbC family protein [Haemophilus parainfluenzae ATCC 33392]
 gi|301156200|emb|CBW15671.1| conserved protein [Haemophilus parainfluenzae T3T1]
 gi|325160033|gb|EGC72162.1| YhbC family protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 151

 Score =  170 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I        + +++F++++ G + + DC ++S+ +S I
Sbjct: 4   LEQKLQEMLQGAVEDLGCELWGIECQRAGRFMTVRLFIDKE-GGVGVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLEQFQRYVGEDIAVHLRIPVLDRRKWQGKLEKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +        + Q+ I F ++  A +I
Sbjct: 123 NDMLTLIVDG-------QEQVLI-FGNIQKANVI 148


>gi|148556721|ref|YP_001264303.1| hypothetical protein Swit_3820 [Sphingomonas wittichii RW1]
 gi|259586199|sp|A5VCZ9|RIMP_SPHWW RecName: Full=Ribosome maturation factor rimP
 gi|148501911|gb|ABQ70165.1| protein of unknown function DUF150 [Sphingomonas wittichii RW1]
          Length = 186

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 9/166 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD-GNMTLRDCEELSQAI 76
           M     ++ +I+P  + +    V+++    K +  LQ+  ER D   + + DCE LS+ I
Sbjct: 1   MADIAALTKLIEPEAKALGLDLVRVAFFGGKSDPTLQVMAERPDTRQLDIADCEALSRRI 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S   D  + IE  YRLEVSSPGIDRP+ R  D+  W+G     ++      +++  G+I+
Sbjct: 61  SDKFDELDPIEDAYRLEVSSPGIDRPLTRVKDWADWSGFDARVKLAAPLDGRKQFDGRIV 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
            +      L   K GE       + +    + SA+LI+TD L++A+
Sbjct: 121 ASDGDSVTLGVNKLGE-------VTVPLAQIASAKLILTDALIKAT 159


>gi|302392349|ref|YP_003828169.1| hypothetical protein Acear_1598 [Acetohalobium arabaticum DSM 5501]
 gi|302204426|gb|ADL13104.1| protein of unknown function DUF150 [Acetohalobium arabaticum DSM
           5501]
          Length = 153

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 9/155 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  I  + +P++E+     V     +E  +  +++FV++ +G +TL DC+++S+ IS  
Sbjct: 5   IADYIFDLARPIVEDHGLELVDTEYQKEGQDWTVRVFVDKPEG-VTLDDCQKISREISDR 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E+ IE  Y LEVSSPG+DRP+  + DF R+ GH++          ++   G+++   
Sbjct: 64  LDIEDPIEKSYILEVSSPGLDRPLKDEEDFKRFTGHLIDVSTYAPVNGEKSFTGELLEII 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    L+ +       N+  + IS D +  A L +
Sbjct: 124 DDKVKLKLD-------NDDVVEISRDKIAKANLAL 151


>gi|227544952|ref|ZP_03975001.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           CF48-3A]
 gi|300910017|ref|ZP_07127477.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           SD2112]
 gi|77745317|gb|ABB02559.1| unknown [Lactobacillus reuteri]
 gi|227185063|gb|EEI65134.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           CF48-3A]
 gi|300892665|gb|EFK86025.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           SD2112]
          Length = 162

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ P++++  F    +  ++E K+  L++++++ DG +TL DC  +S  +S 
Sbjct: 8   SVVETVTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYIDK-DGGITLEDCALVSDELSE 66

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G + 
Sbjct: 67  ALDNVEPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKVYEGTLT 126

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             S     L+   +        QI I    +  ARL +
Sbjct: 127 QLSNKEITLDYLDKTRHR----QITIDRQKIAQARLAI 160


>gi|296533458|ref|ZP_06896040.1| protein of hypothetical function DUF150 [Roseomonas cervicalis ATCC
           49957]
 gi|296266213|gb|EFH12256.1| protein of hypothetical function DUF150 [Roseomonas cervicalis ATCC
           49957]
          Length = 195

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 8/164 (4%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCE 70
           E  +  + GL   I++ IQP +  M +  V++ +  ++   +Q+  +R DG  + + DCE
Sbjct: 4   EDDLPQNEGLEARIAAAIQPTLTAMGYEIVRVQIHGKQTPTVQVMADRADGALIGVADCE 63

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S A+  +LDV++   G + LEVSSPGIDRP+ R  D+LR+ GH+   E+ +    +++
Sbjct: 64  AISHAVGAVLDVDDPFSGEWNLEVSSPGIDRPLTRTKDWLRFTGHLAIAEMSIPFEGRRR 123

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             G I+G  E    L  E+  E        A+    +  A+L++
Sbjct: 124 FRGTILGADEASVRLRLEEGTE-------YALPRHDIRRAKLVL 160


>gi|331701345|ref|YP_004398304.1| ribosome maturation factor rimP [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128688|gb|AEB73241.1| Ribosome maturation factor rimP [Lactobacillus buchneri NRRL
           B-30929]
          Length = 157

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 78/158 (49%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  V++P++E+ SF    +  ++E K+  L++++++  G +T+ DC  +S  +S 
Sbjct: 3   NVVETVKQVVEPILEKHSFYLFDVEFVKENKSWYLRVYIDKK-GGITIDDCVLVSDELSE 61

Query: 79  ILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+   ++  +  G  +   +  +    +   G + 
Sbjct: 62  KLDAMDPDPIPQAYFLEVSSPGAERPLRNDAELKQAIGEYIHVSLYQNLNGNKTFEGILK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +    L+ +K G++D     + +  + +  ARL +
Sbjct: 122 SLDDDKLVLQNDKWGKQD----TLEVPRNLIAKARLAI 155


>gi|315658445|ref|ZP_07911317.1| protein of hypothetical function DUF150 [Staphylococcus lugdunensis
           M23590]
 gi|315496774|gb|EFU85097.1| protein of hypothetical function DUF150 [Staphylococcus lugdunensis
           M23590]
          Length = 155

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 87/155 (56%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++ ++IQPV+E +++  V++  ++E K+  L++ ++++ G + L DC   S+ IS +
Sbjct: 4   ITEEVETLIQPVLEALNYELVEVEFVKEGKDHFLRVSIDKE-GGVDLNDCTLASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I+  Y L+V+SPG +RP+ ++ D+ R     +   +     + ++ +G ++  +
Sbjct: 63  MDEHDPIKEMYYLDVASPGAERPIKKEQDYQRAIQQPIFVSLYAPIENNKEWLGILVEVT 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +E +++ +K     QI+I  + +  AR  V
Sbjct: 123 AETITMEVKEKAKKK----QISIPRNKIAKARHAV 153


>gi|313638096|gb|EFS03363.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
          Length = 155

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ +E+    V I+  +E  N  L+IF+++ DG + + +C  +S+ +S  
Sbjct: 4   VLDQVEAIVAPITDELHLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF+      V          ++   G +    
Sbjct: 63  MDESDPITQNYFLEVSSPGAERPLKKEQDFVNAVSKYVHVTSYEPIDGRKMWEGTLESYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +    +  K    +   I  D +  ARL +
Sbjct: 123 GETLVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|154706898|ref|YP_001423971.1| hypothetical protein CBUD_0561 [Coxiella burnetii Dugway 5J108-111]
 gi|189040247|sp|A9KBL9|RIMP_COXBN RecName: Full=Ribosome maturation factor rimP
 gi|154356184|gb|ABS77646.1| hypothetical cytosolic protein [Coxiella burnetii Dugway 5J108-111]
          Length = 153

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V           +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATRILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+     +      +++  G I+ 
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGNKAKIRLREPREGQRQFRGMIVA 119

Query: 138 TS-ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              E    L+ + +  K        +    +  A LI
Sbjct: 120 VDNEEQVTLQLDNKILK--------VPLGEIEKANLI 148


>gi|289434602|ref|YP_003464474.1| hypothetical protein lse_1237 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170846|emb|CBH27388.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 155

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + +++ P+ +E+    V I+  +E  N  L++F+++ DG + + +C  +S+ +S  
Sbjct: 4   VLDQVEAIVAPITDELHLELVDIAFEKEGPNWFLRVFIDK-DGGVDIDECAAVSEKVSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I  +Y LEVSSPG +RP+ ++ DF+      V          ++   G +    
Sbjct: 63  MDESDPITQNYFLEVSSPGAERPLKKEQDFVNAVSKYVHVTSYEPIDGRKMWEGTLESYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +    +  K    +   I  D +  ARL +
Sbjct: 123 GETLVITITDKTRK----ITCEIPKDKVAKARLAI 153


>gi|242373556|ref|ZP_04819130.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           M23864:W1]
 gi|242348919|gb|EES40521.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           M23864:W1]
          Length = 178

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + S+IQP+++++ F  V+I  ++E K+  L+I ++++ G + L DC   S+ IS  
Sbjct: 27  VTEQVESIIQPILDDLKFELVEIEYVKEGKDRFLRISIDKE-GGVDLNDCTLASEKISEA 85

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ +  DF       V   +      +++ +G +    
Sbjct: 86  MDENDPIPEMYYLDVASPGAERPIKKDKDFHNAVTQPVFISLYAPIEGEKEWLGILQSVD 145

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +E +++ +      QI I  + +  AR  V
Sbjct: 146 DDNIVMEVKEKSKTK----QIEIPRNKIAKARHAV 176


>gi|86157526|ref|YP_464311.1| hypothetical protein Adeh_1099 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|123499926|sp|Q2IPZ0|RIMP_ANADE RecName: Full=Ribosome maturation factor rimP
 gi|85774037|gb|ABC80874.1| hypothetical protein Adeh_1099 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 171

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 17/165 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G+  +A  + S+++PV+E   +  V++          L++F+++  G + + DC+ +S+
Sbjct: 4   IGEQSIAEQVRSLLEPVLERDGYELVEVEWARLAGRWTLRVFIDKA-GGVGIDDCQAVSK 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD------- 127
            + PILDV + IE  Y LEVSSPG+DRP+ +  DF R+ G  V  +              
Sbjct: 63  TVEPILDVADFIEPAYDLEVSSPGLDRPLRKPRDFDRYAGQRVHVKAYGPVAGTAPGSPA 122

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++   G + G  +    L        D++     +  D +  A L
Sbjct: 123 RKHWTGVLKGFRDGAVEL--------DVDGALHRVPHDQIAKANL 159


>gi|288940249|ref|YP_003442489.1| hypothetical protein Alvin_0500 [Allochromatium vinosum DSM 180]
 gi|288895621|gb|ADC61457.1| protein of unknown function DUF150 [Allochromatium vinosum DSM 180]
          Length = 151

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 10/153 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ + + V+E + +  V +    +     L+++++ + G +TL DC  +S  +S +L
Sbjct: 5   DSQLTLLARRVVEPLGYELVGVEYFQKGGGATLRVYIDHERG-ITLDDCTAVSHQLSGVL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+V    F R+ G  V   +      ++KL G ++G   
Sbjct: 64  DVEDPISDQYDLEVSSPGLDRPLVFPEHFERFAGSRVRIRLSEKIEGRRKLEGVLLGVVP 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            G  L  ++R           I   S+ SARLI
Sbjct: 124 GGVALRADER--------DWEIPLTSIDSARLI 148


>gi|319787429|ref|YP_004146904.1| hypothetical protein Psesu_1831 [Pseudoxanthomonas suwonensis 11-1]
 gi|317465941|gb|ADV27673.1| protein of unknown function DUF150 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 192

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 17/165 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN--------MTLRDCEEL 72
             +I  ++ P +E +    + +  L       L+++++             +T+ DCE +
Sbjct: 5   TSEIVQLLAPTVESLGLELLGVEYLPAPGGATLRLYIDVPAAGEGEEPARTVTIEDCEAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LDV + I G+Y LEVSSPG+DRP+     F+R+ G      + L    +++L 
Sbjct: 65  SREVSAQLDVADPISGNYTLEVSSPGMDRPLFAAEHFIRFLGQQAKVGLKLPQDGRRRLQ 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
           G I+  ++              ++  +  ++ D++  ARL+   E
Sbjct: 125 GTILRVADGQV--------AFGLDNAEFVVALDNIDKARLVPDWE 161


>gi|259586217|sp|A4VPP2|RIMP_PSEU5 RecName: Full=Ribosome maturation factor rimP
 gi|327482027|gb|AEA85337.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 152

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 77/152 (50%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + ++   I  + + ++ LL+++++  +G + + DCE++S+ +S +LD
Sbjct: 6   EQLQALLAPVVEALGYQCWGIEFISQGRHSLLRVYIDHANG-ILIDDCEKVSRQLSGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     ++   G  V  ++      ++   G + G  E 
Sbjct: 65  VEDPISVDYTLEVSSPGMDRPLFTIEQYVAHVGDQVKIKLRSPFEGRRNFQGLLRGVEEQ 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +  +          +  +  D +  A +I
Sbjct: 125 DVVVLVDDH--------EYLLPIDMIDKANII 148


>gi|153207258|ref|ZP_01946022.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165918794|ref|ZP_02218880.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
 gi|212218227|ref|YP_002305014.1| hypothetical protein CbuK_0601 [Coxiella burnetii CbuK_Q154]
 gi|226707776|sp|B6J6A9|RIMP_COXB1 RecName: Full=Ribosome maturation factor rimP
 gi|120576746|gb|EAX33370.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165917518|gb|EDR36122.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
 gi|212012489|gb|ACJ19869.1| hypothetical cytosolic protein [Coxiella burnetii CbuK_Q154]
          Length = 153

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V           +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATTILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+     +      +++  G I+ 
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGNKAKIRLREPREGQRQFRGMIVA 119

Query: 138 TS-ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              E    L+ + +  K        +    +  A LI
Sbjct: 120 VDNEEQVTLQLDNKILK--------VPLGEIEKANLI 148


>gi|304404289|ref|ZP_07385951.1| protein of unknown function DUF150 [Paenibacillus curdlanolyticus
           YK9]
 gi|304347267|gb|EFM13099.1| protein of unknown function DUF150 [Paenibacillus curdlanolyticus
           YK9]
          Length = 153

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P I+E  F  V +  ++E  N  L+IFV+++ G + + +C  +S+ +S  
Sbjct: 6   IKSTVEEMVKPFIDENGFELVDVEYVKEGSNWFLRIFVDKE-GGIDIDECGRVSEYLSEQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I   Y LEVSSPG +RP+ +  D  +  G  V          +++  G +   +
Sbjct: 65  LDQKDPITDAYFLEVSSPGAERPLKKPEDVHKAVGKHVYMTTYEPVHGQKEFEGLLQSFN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                + + +R           I +  + SARL +
Sbjct: 125 GEVVSIREGQR--------NFEIPYAKIASARLAI 151


>gi|259585813|sp|Q2SML5|RIMP_HAHCH RecName: Full=Ribosome maturation factor rimP
          Length = 150

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M    D+  +++PV+E M      +  + + K  LL+I+++++ G + + DCE++S+ IS
Sbjct: 1   MARKDDLYQLLKPVVEGMGCDFWGMDYIAQGKRSLLRIYIDKESG-VLVDDCEKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I+G Y LEVSSPG DRP+     +  + G ++   +      ++K  G +  
Sbjct: 60  AILDVEDPIKGEYTLEVSSPGWDRPLFNVEQYKAYIGSIIEVRLQAPFNGRRKFKGLLAA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  L+        ++  +     +++  A ++
Sbjct: 120 VENDEIVLQ--------VDAEEFIFPVETIDKANVV 147


>gi|167746759|ref|ZP_02418886.1| hypothetical protein ANACAC_01471 [Anaerostipes caccae DSM 14662]
 gi|167653719|gb|EDR97848.1| hypothetical protein ANACAC_01471 [Anaerostipes caccae DSM 14662]
          Length = 171

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 10/170 (5%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNM 64
           F   + +  + G   +      ++ P+I+E  F  V +  ++E  N  L+I+ ++ DG +
Sbjct: 9   FAQKRRQGNLAGKAEIEQKTEELVTPIIDENHFELVDVEYVKEGANWYLRIYADK-DGGI 67

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           ++ DC  +S+A+   LD ++ I+  Y LEVSSPG+ RP+ ++ D+ R  G  V  ++  +
Sbjct: 68  SIDDCVLISRALEAKLDADDFIKDAYILEVSSPGLGRPLKKEKDYQRSIGQSVDIKLYKA 127

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +++  G +   S+    L      +             S+ SARL +
Sbjct: 128 IDKQKEFTGILKEYSKERIILSIGGTDQ--------EFETKSVASARLSL 169


>gi|296108418|ref|YP_003620119.1| putative protein conserved in bacteria [Legionella pneumophila
           2300/99 Alcoy]
 gi|295650320|gb|ADG26167.1| putative protein conserved in bacteria [Legionella pneumophila
           2300/99 Alcoy]
 gi|307611646|emb|CBX01333.1| hypothetical protein LPW_30281 [Legionella pneumophila 130b]
          Length = 131

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 10/140 (7%)

Query: 36  MSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
           M +       L + K+ LL+I++++ DG + + DC+E+S+ +S +LDVE+ I GHY LE+
Sbjct: 1   MGYELWGCEYLSQGKHSLLRIYIDKPDG-IGIDDCQEVSKQVSAMLDVEDPIPGHYSLEI 59

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPGI RP+     + R+ G+ +  +       K+KL G I+  SE    L        D
Sbjct: 60  SSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVL--------D 111

Query: 155 MNELQIAISFDSLLSARLIV 174
           +N     I   +++ A L V
Sbjct: 112 INNEHQEILLSNIVKANLTV 131


>gi|148543927|ref|YP_001271297.1| hypothetical protein Lreu_0695 [Lactobacillus reuteri DSM 20016]
 gi|184153323|ref|YP_001841664.1| hypothetical protein LAR_0668 [Lactobacillus reuteri JCM 1112]
 gi|167016762|sp|A5VJD6|RIMP_LACRD RecName: Full=Ribosome maturation factor rimP
 gi|226708007|sp|B2G6V2|RIMP_LACRJ RecName: Full=Ribosome maturation factor rimP
 gi|148530961|gb|ABQ82960.1| protein of unknown function DUF150 [Lactobacillus reuteri DSM
           20016]
 gi|183224667|dbj|BAG25184.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
          Length = 157

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ P++++  F    +  ++E K+  L++++ + DG +TL DC  +S  +S 
Sbjct: 3   SVVETVTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYINK-DGGITLEDCALVSDELSE 61

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G + 
Sbjct: 62  ALDNVEPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKVYEGTLT 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             S+    L+   +        QI I    +  ARL +
Sbjct: 122 QLSDKEITLDYLDKTRHR----QITIDRQKIAQARLAI 155


>gi|293390260|ref|ZP_06634594.1| protein YhbC [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950794|gb|EFE00913.1| protein YhbC [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 151

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++  +   I          +++F++++ G +T+ DC ++S+ +S +
Sbjct: 4   LEQKLQDLLQGSVEDLGCQLWGIECQRVGRYLTVRLFIDKE-GGVTVEDCADVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   +   R+ G  +   + +   D++K  G+++   
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAQCARYVGQEILVHLRIPVADRRKWQGELVKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +K+ +         ++FD++  A ++
Sbjct: 123 NDMITLIVDKQEQI--------LAFDNIQKASVV 148


>gi|290473445|ref|YP_003466312.1| YhbC-like protein (fragment) [Xenorhabdus bovienii SS-2004]
 gi|289172745|emb|CBJ79516.1| YhbC-like protein (fragment) [Xenorhabdus bovienii SS-2004]
          Length = 140

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 75/146 (51%), Gaps = 9/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V +  +  +   L+++++ ++G +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVEALGFELVGLEFIRARVSTLRVYIDSEEG-ITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+ +   + R+ G  V+  + ++  ++++  G I         +  
Sbjct: 60  VLYNLEISSPGLERPLFKAEHYQRFMGEEVSLVLRMAMQNRRRWQGIIKVVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           + + E          +  ++  A L+
Sbjct: 120 DGKDEV--------FALSNIQKANLV 137


>gi|330807481|ref|YP_004351943.1| Sm_like superfamily [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375589|gb|AEA66939.1| Conserved hypothetical protein; Sm_like superfamily [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 152

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+  + +    I    + ++ LL+++++++ G + + DC  +S+ IS +LD
Sbjct: 6   EQLQALLAPVVVALGYECWGIEFSAQGRHSLLRVYIDKE-GGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPITSEYTLEVSSPGMERPLFTLEQFASFAGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     +++ +  +  D +  A +I +
Sbjct: 122 -----EEQDVVVQVDDHEFLLPIDMIDKANIIPS 150


>gi|332981611|ref|YP_004463052.1| hypothetical protein Mahau_1032 [Mahella australiensis 50-1 BON]
 gi|332699289|gb|AEE96230.1| protein of unknown function DUF150 [Mahella australiensis 50-1 BON]
          Length = 154

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 2/143 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +  ++ P++E+  F  V I   +E     L+IF+++ DG +T+ DCE +S+ +S  
Sbjct: 6   VADTVRQLVMPILEDNGFELVDIEFKKEGAEQYLRIFIDKPDG-ITIDDCELVSRHLSDK 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LEVSSPGIDRP+  + DF R  G  V  ++   S   +   G ++G  
Sbjct: 65  LDEIDPIPQAYILEVSSPGIDRPLKTQRDFERSMGKQVEIKLYKQSMGHKTYKGTLVGFD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAI 162
           +    +E             IA+
Sbjct: 125 DERVEIETVDNQHLSFGIKDIAL 147


>gi|319892282|ref|YP_004149157.1| transcription termination protein NusA-like protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161978|gb|ADV05521.1| transcription termination protein NusA-like protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464621|gb|ADX76774.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 155

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++IQPV++E++F  V +   +E ++  L+I +++  G + L DC   S+ IS +
Sbjct: 4   VTEQVETIIQPVLDELNFELVDVEFAKEGRDHYLRIAIDKP-GGVDLNDCTLASERISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D ++ I   Y L+VSSPG +RP+  +  F       +   +       ++ +G +   +
Sbjct: 63  MDEQDPIPQAYYLDVSSPGAERPIKNEKGFQNAIEQPIFVSLYAPIEGDKEWLGHLKSVT 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    +E + + +       I I  D +  AR  V
Sbjct: 123 EDAITMEVKVKAKTK----TITIPRDKIAKARHAV 153


>gi|197121570|ref|YP_002133521.1| hypothetical protein AnaeK_1159 [Anaeromyxobacter sp. K]
 gi|259585696|sp|B4UHF7|RIMP_ANASK RecName: Full=Ribosome maturation factor rimP
 gi|196171419|gb|ACG72392.1| protein of unknown function DUF150 [Anaeromyxobacter sp. K]
          Length = 171

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 17/165 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G+  +A  + S+++PV+E   +  V++          L++F+++  G + + DC+ +S+
Sbjct: 4   IGEQSIAEQVRSLLEPVLERDGYELVEVEWARLAGRWTLRVFIDKA-GGVGIDDCQAVSK 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD------- 127
            + PILDV ++IE  Y LEVSSPG+DRP+ +  DF R+ G  V  +              
Sbjct: 63  TVEPILDVADVIEPAYDLEVSSPGLDRPLRKPRDFDRYAGQRVHVKAYGPVAGTAPGAPA 122

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++   G + G  +    L        D++ +   +  D +  A L
Sbjct: 123 RKHWTGVLKGFRDGAVEL--------DVDGVLHRVPHDQIAKANL 159


>gi|167758064|ref|ZP_02430191.1| hypothetical protein CLOSCI_00402 [Clostridium scindens ATCC 35704]
 gi|167663961|gb|EDS08091.1| hypothetical protein CLOSCI_00402 [Clostridium scindens ATCC 35704]
          Length = 155

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +++ P++EE  F  V +  ++E     L+ ++++  G + + DCE +S+ +S IL
Sbjct: 8   EQKTEAILMPIVEEHGFELVDVEYVKEGGTWYLRAYIDKP-GGINVDDCEVVSRRLSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y LEVSSPG+ RP+ ++ DF R  G  V          +++  G +    +
Sbjct: 67  DEKDYIEEAYILEVSSPGLGRPLKKEKDFKRSLGEEVDVRTYRMIEKQKEFTGLLKDYDD 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    K   +  IA+
Sbjct: 127 ATVTIEMEDGTLKTFEKSDIAL 148


>gi|90961544|ref|YP_535460.1| hypothetical protein LSL_0568 [Lactobacillus salivarius UCC118]
 gi|227890632|ref|ZP_04008437.1| protein of hypothetical function DUF150 [Lactobacillus salivarius
           ATCC 11741]
 gi|301300280|ref|ZP_07206489.1| conserved hypothetical protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|122449172|sp|Q1WUF8|RIMP_LACS1 RecName: Full=Ribosome maturation factor rimP
 gi|90820738|gb|ABD99377.1| Conserved hypothetical protein [Lactobacillus salivarius UCC118]
 gi|227867570|gb|EEJ74991.1| protein of hypothetical function DUF150 [Lactobacillus salivarius
           ATCC 11741]
 gi|300852121|gb|EFK79796.1| conserved hypothetical protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 157

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 77/158 (48%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +++++ P+++E  F  V +  ++E K+  L++++++ +G + + +C  +S  +S 
Sbjct: 3   SVVETVTNLVTPILDENHFELVDVEFVKEGKSWYLRVYIDKPNG-INIEECALVSDKLSE 61

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ ++ D+ R     +   +  +   ++   G ++
Sbjct: 62  KLDSCDPDPIPQAYYLEVSSPGAERPLKKEKDYERALNKYIHISLYQAIDGQKVYEGTMV 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             ++    LE   +       +      + +  ARL +
Sbjct: 122 DLNKETLTLEYRVKTRT----VTKTFDRNKIAKARLAI 155


>gi|228474945|ref|ZP_04059673.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|314936574|ref|ZP_07843921.1| conserved hypothetical protein [Staphylococcus hominis subsp.
           hominis C80]
 gi|228270930|gb|EEK12318.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|313655193|gb|EFS18938.1| conserved hypothetical protein [Staphylococcus hominis subsp.
           hominis C80]
          Length = 155

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 78/155 (50%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++ ++I P++++++F  V +   +E K+  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   ITEEVETIITPILDDLNFELVDVEYAKEGKDRFLRISIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ ++ D+       V   +       ++ +G +    
Sbjct: 63  MDQNDPIPEMYYLDVASPGAERPLKKEKDYQNAIEQPVFVSLYAPIEGDKEWLGILKSVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +E +++ +K      I I  + +  AR  V
Sbjct: 123 DDTITMEVKEKSKKK----TIEIPRNKIAKARHAV 153


>gi|148825865|ref|YP_001290618.1| hypothetical protein CGSHiEE_04150 [Haemophilus influenzae PittEE]
 gi|229846822|ref|ZP_04466929.1| hypothetical protein CGSHi7P49H1_02333 [Haemophilus influenzae
           7P49H1]
 gi|167012908|sp|A5UBT4|RIMP_HAEIE RecName: Full=Ribosome maturation factor rimP
 gi|148716025|gb|ABQ98235.1| hypothetical protein CGSHiEE_04150 [Haemophilus influenzae PittEE]
 gi|229810311|gb|EEP46030.1| hypothetical protein CGSHi7P49H1_02333 [Haemophilus influenzae
           7P49H1]
 gi|309973010|gb|ADO96211.1| 30S ribosomal maturation protein RimP [Haemophilus influenzae
           R2846]
          Length = 151

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRMGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +         + F ++  A ++
Sbjct: 123 KDMITLIVDDQEQI--------LVFGNIQKANVV 148


>gi|126175441|ref|YP_001051590.1| hypothetical protein Sbal_3241 [Shewanella baltica OS155]
 gi|153001791|ref|YP_001367472.1| hypothetical protein Shew185_3282 [Shewanella baltica OS185]
 gi|160876525|ref|YP_001555841.1| hypothetical protein Sbal195_3419 [Shewanella baltica OS195]
 gi|217972313|ref|YP_002357064.1| hypothetical protein Sbal223_1126 [Shewanella baltica OS223]
 gi|304410267|ref|ZP_07391886.1| protein of unknown function DUF150 [Shewanella baltica OS183]
 gi|307302022|ref|ZP_07581780.1| protein of unknown function DUF150 [Shewanella baltica BA175]
 gi|166990740|sp|A3D7K8|RIMP_SHEB5 RecName: Full=Ribosome maturation factor rimP
 gi|166990756|sp|A6WRH0|RIMP_SHEB8 RecName: Full=Ribosome maturation factor rimP
 gi|189040141|sp|A9KZX3|RIMP_SHEB9 RecName: Full=Ribosome maturation factor rimP
 gi|254799945|sp|B8E6N0|RIMP_SHEB2 RecName: Full=Ribosome maturation factor rimP
 gi|125998646|gb|ABN62721.1| protein of unknown function DUF150 [Shewanella baltica OS155]
 gi|151366409|gb|ABS09409.1| protein of unknown function DUF150 [Shewanella baltica OS185]
 gi|160862047|gb|ABX50581.1| protein of unknown function DUF150 [Shewanella baltica OS195]
 gi|217497448|gb|ACK45641.1| protein of unknown function DUF150 [Shewanella baltica OS223]
 gi|304351676|gb|EFM16075.1| protein of unknown function DUF150 [Shewanella baltica OS183]
 gi|306914060|gb|EFN44481.1| protein of unknown function DUF150 [Shewanella baltica BA175]
 gi|315268719|gb|ADT95572.1| protein of unknown function DUF150 [Shewanella baltica OS678]
          Length = 151

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +E + F+   I  ++  K+  L++F++ ++G + + DC   S+ +S +
Sbjct: 4   LEFRLAEMLKVPVEALGFQLWGIEYVQAGKHSTLRVFIDGENG-INIEDCANASRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAGYVGEDVKLQLTMPVDGSRNLKGAITAVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L         +N  ++ ++ D++    LI
Sbjct: 123 GQMLSL--------KVNGKELVVALDNIRKGNLI 148


>gi|289550943|ref|YP_003471847.1| hypothetical protein SLGD_01629 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180475|gb|ADC87720.1| hypothetical protein SLGD_01629 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 155

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 87/155 (56%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++ ++IQPV+E +++  V++  ++E K+  L++ ++++ G + L DC   S+ IS +
Sbjct: 4   ITEEVETLIQPVLEALNYELVEVEFVKEGKDHFLRVSIDKE-GGVDLNDCTLASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I+  Y L+V+SPG +RP+ ++ D+ +     +   +     + ++ +G ++  +
Sbjct: 63  MDEHDPIKEMYYLDVASPGAERPIKKEQDYQKAIQQPIFVSLYAPIENNKEWLGILVEVT 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +E +++ +K     QI+I  + +  AR  V
Sbjct: 123 AETITMEVKEKAKKK----QISIPRNKIAKARHAV 153


>gi|225027046|ref|ZP_03716238.1| hypothetical protein EUBHAL_01302 [Eubacterium hallii DSM 3353]
 gi|224955510|gb|EEG36719.1| hypothetical protein EUBHAL_01302 [Eubacterium hallii DSM 3353]
          Length = 162

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 7/162 (4%)

Query: 9   SKYEPRI-FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTL 66
           S  E RI      +      ++ P+IEE  F  V +  + E  N  L+++ +++ G + +
Sbjct: 2   SGKEVRINMKRTEIVAKTEELVTPIIEENHFELVDVEYVREGANWYLRVYADKE-GGINI 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DC  +S+A+   LD E+ I   Y LEVSSPG+ RP+ ++ DF R  G  V C++  +  
Sbjct: 61  DDCVLISRALEEKLDAEDFISDAYILEVSSPGLGRPLKKEKDFKRSLGKSVECKLYKAIN 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKR----GEKDMNELQIAISF 164
            +++  G +   +E    +E E        KD+  +++AI F
Sbjct: 121 KQKEFEGILKDFTEDTVTIETEGNELVLDRKDIAMIRLAIDF 162


>gi|332188274|ref|ZP_08390001.1| hypothetical protein SUS17_3404 [Sphingomonas sp. S17]
 gi|332011670|gb|EGI53748.1| hypothetical protein SUS17_3404 [Sphingomonas sp. S17]
          Length = 192

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 14/172 (8%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDD-GNMTLRDCEELSQAI 76
           M     ++ +I+P  + + F  V++       +  LQ+  ER D   + + DC +LS+ I
Sbjct: 1   MADIALLTQLIEPEAKALGFELVRVKMYGGTSDPTLQVMAERPDTRQLNIDDCADLSRRI 60

Query: 77  SPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           S ++D       + I+  YRLEVSSPGIDRP+ R  DF  W GH     +      +++ 
Sbjct: 61  SDVMDALEEQGRDPIDHAYRLEVSSPGIDRPLTRLKDFADWAGHEARITLAEKLNGRKQF 120

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
            G + G       +        D  E++  + F ++  A+L++TD L+ A++
Sbjct: 121 KGDLAGIEGDNVII-------VDGEEVRHKLPFAAIEDAKLVMTDRLIAATV 165


>gi|261867878|ref|YP_003255800.1| hypothetical protein D11S_1199 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413210|gb|ACX82581.1| protein YhbC [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 151

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E+   +   I          +++F++++ G +T+ DC ++S+ +S +
Sbjct: 4   LEQKLQDLLQGSVEDFGCQLWGIECQRVGRYLTVRLFIDKE-GGVTVEDCADVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  G++    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAQYARYVGQEILVHLRIPVADRRKWQGELAKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +K+ +         ++F ++  A ++
Sbjct: 123 NDMITLIVDKQEQI--------LAFGNIQKASVV 148


>gi|260914258|ref|ZP_05920731.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631891|gb|EEX50069.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 162

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I        L ++++++++ G +T+ DC ++S+ +S I
Sbjct: 15  LEQKLHELLQSTVEDLGCELWGIECQRSGRFLTVRLYIDKE-GGVTVDDCADVSRQVSAI 73

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DR +   + + R+ G  +   + +   D++K  GK+    
Sbjct: 74  LDVEDPIADKYNLEVSSPGLDRALFTLAQYQRYIGQDIVVHLRIPVLDRRKWQGKLEKIE 133

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + +        +  + F ++  A +I
Sbjct: 134 NDMLTLTVDGQ--------EQVLVFGNIQKANII 159


>gi|70734335|ref|YP_257975.1| hypothetical protein PFL_0842 [Pseudomonas fluorescens Pf-5]
 gi|91208376|sp|Q4KIF8|RIMP_PSEF5 RecName: Full=Ribosome maturation factor rimP
 gi|68348634|gb|AAY96240.1| 15 kDa protein [Pseudomonas fluorescens Pf-5]
          Length = 158

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+  + +    I    + ++ LL+++++++ G + + DC  +S+ IS +LD
Sbjct: 12  EQLQALLAPVVVALGYECWGIEFSAQGRHSLLRVYIDKE-GGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 71  VEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKLRSPFEGRRNFQGLLRGV--- 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     +++ +  +  D +  A +I +
Sbjct: 128 -----EEQDVVVQVDDHEFLLPIDMIDKANIIPS 156


>gi|256847047|ref|ZP_05552493.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715711|gb|EEU30686.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 159

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++QP++++  F       ++E +   L++++++  G +TL DC  +S  +S 
Sbjct: 5   DVIKTVNELVQPILDQYDFYLFDTEFVKEGHSWYLRVYIDK-TGGITLEDCVNVSDQLSE 63

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ ++ D+ R  G  +   +  +   K+   G + 
Sbjct: 64  ALDNCDPDPIPQAYFLEVSSPGAERPLKKEEDYHRAIGEYIHLSLYQALEGKKVYEGNLK 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     ++   +         + I    +  ARL V
Sbjct: 124 TVTADELTIDYLDKTRHK----TLTIPRKLVAKARLAV 157


>gi|325290364|ref|YP_004266545.1| Ribosome maturation factor rimP [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965765|gb|ADY56544.1| Ribosome maturation factor rimP [Syntrophobotulus glycolicus DSM
           8271]
          Length = 152

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P+ EE+    V +  ++E  +  L++++++ DG + + DC  +S  +S I
Sbjct: 5   VIQKVWQIVEPITEELKLELVDVEYVKEGAHWYLRVYIDK-DGGVDIDDCASVSHQLSNI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD +N+I   Y LEVSSPGI+RP+ ++ D+ ++ G +V            +  G + G  
Sbjct: 64  LDSKNLIPQAYMLEVSSPGIERPLSKREDYDKYIGKLVRVHTSEQFLGYTQFSGYLKGLL 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    LE E +        + AI  + +  A L
Sbjct: 124 DEKVILEYEGQ--------EAAIPINIVEKAHL 148


>gi|323495467|ref|ZP_08100542.1| ribosome maturation protein RimP [Vibrio sinaloensis DSM 21326]
 gi|323319464|gb|EGA72400.1| ribosome maturation protein RimP [Vibrio sinaloensis DSM 21326]
          Length = 140

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 75/146 (51%), Gaps = 10/146 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++  +    +  V +  +    +  L+IF++ ++G + + DC E+S+ +S ++DVE+ I 
Sbjct: 1   LEAPVAASGYELVGLEFIRAGEHSTLRIFIDHENG-INVEDCAEVSRQVSAVMDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIHSVDGETISVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
           E   E          +  ++  A LI
Sbjct: 120 EGSEE--------EFALSNISKANLI 137


>gi|227364836|ref|ZP_03848883.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM2-3]
 gi|325682538|ref|ZP_08162055.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM4-1A]
 gi|227070099|gb|EEI08475.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM2-3]
 gi|324978377|gb|EGC15327.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM4-1A]
          Length = 162

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ P++++  F    +  ++E K+  L++++ + DG +TL DC  +S  +S 
Sbjct: 8   SVVETVTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYINK-DGGITLEDCALVSDELSE 66

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G + 
Sbjct: 67  ALDNVEPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKVYEGTLT 126

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             S+    L+   +        QI I    +  ARL +
Sbjct: 127 QLSDKEITLDYLDKTRHR----QITIDRQKIAQARLAI 160


>gi|117919477|ref|YP_868669.1| hypothetical protein Shewana3_1028 [Shewanella sp. ANA-3]
 gi|166919124|sp|A0KTZ4|RIMP_SHESA RecName: Full=Ribosome maturation factor rimP
 gi|117611809|gb|ABK47263.1| protein of unknown function DUF150 [Shewanella sp. ANA-3]
          Length = 151

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +E + F+   I  ++  K+ +L++F++ ++G + + DC  +S+ +S +
Sbjct: 4   LESRLADMLKVPVEALGFQLWGIEYVQAGKHSILRVFIDGENG-INIEDCANVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGSRNLKGAITQVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L    +        ++ ++ D++    +I
Sbjct: 123 GQMLSLNVNGK--------ELVVALDNIRKGNII 148


>gi|325265379|ref|ZP_08132103.1| hypothetical protein HMPREF0240_04394 [Clostridium sp. D5]
 gi|324029380|gb|EGB90671.1| hypothetical protein HMPREF0240_04394 [Clostridium sp. D5]
          Length = 155

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +++P++  + F  V +  ++E     L+ ++++  G +T+ DCE +S+  S IL
Sbjct: 8   EQQTEELLEPIVTGVGFELVDVEYVKEAGTWYLRAYIDKP-GGITVDDCEAVSRKFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y  EVSSPG+ RP+ ++ D+ R  G  V  +   +   +++ +G +    +
Sbjct: 67  DEKDYIEDTYIFEVSSPGLGRPLKKEKDYRRSLGEEVEIKTYRAIDRQKEFVGILKDYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    +   + +IA+
Sbjct: 127 DTVTIEYEDETTQVFEKSEIAL 148


>gi|310823423|ref|YP_003955781.1| hypothetical protein STAUR_6197 [Stigmatella aurantiaca DW4/3-1]
 gi|309396495|gb|ADO73954.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 161

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +     ++++P++       + +  + E+   +L++F+++  G + L +C ++S+A+ P 
Sbjct: 10  VEERAMTLLEPIVAGEGLELIDLEFVREREGWVLRLFIDKPGGRVGLDECSQVSRAVDPA 69

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIMG 137
           LDVE+++   Y LEVSSPG++RP+ + S + R  G  V  +     GD  ++   G +  
Sbjct: 70  LDVEDLVPNEYNLEVSSPGVNRPLKKLSHYERVKGQKVKVKTFGPIGDPPRKNFSGTLTE 129

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  G  +E E  G          I    +  A L
Sbjct: 130 VTAEGIAVEVEGAGA-------FRIPLKDIAKANL 157


>gi|219870468|ref|YP_002474843.1| hypothetical protein HAPS_0200 [Haemophilus parasuis SH0165]
 gi|219690672|gb|ACL31895.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
          Length = 135

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 10/139 (7%)

Query: 36  MSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
           M F  V +        L ++++++++ G +T+ DC ++S+ +S I DVE+ I   Y LEV
Sbjct: 1   MGFELVGVECQRAGRFLTVRLYIDKE-GGVTVDDCSDVSRQVSAIFDVEDPIADKYNLEV 59

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPG+DRP+   + + R+ G  +   + +   D++K  G+++        L+ +   +  
Sbjct: 60  SSPGLDRPLFTLAHYQRFVGREIVVHLRIPMLDRRKWQGELVSVEGDLITLKVDGNLQ-- 117

Query: 155 MNELQIAISFDSLLSARLI 173
                 A +F ++  A LI
Sbjct: 118 ------AFAFGNIQKANLI 130


>gi|212212196|ref|YP_002303132.1| hypothetical protein CbuG_0575 [Coxiella burnetii CbuG_Q212]
 gi|226707750|sp|B6IZ59|RIMP_COXB2 RecName: Full=Ribosome maturation factor rimP
 gi|212010606|gb|ACJ17987.1| hypothetical cytosolic protein [Coxiella burnetii CbuG_Q212]
          Length = 153

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 12/160 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V           +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATTILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+     +      +++  G I+ 
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGNKAKIRLREPREGQRQFRGMIVA 119

Query: 138 TS-ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
              E    L+ + +  K        +S   +  A L +TD
Sbjct: 120 VDNEEQVTLQLDNKILK--------VSLGEIEKANL-ITD 150


>gi|154506275|ref|ZP_02043013.1| hypothetical protein RUMGNA_03817 [Ruminococcus gnavus ATCC 29149]
 gi|153793414|gb|EDN75834.1| hypothetical protein RUMGNA_03817 [Ruminococcus gnavus ATCC 29149]
          Length = 155

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +++P++ E  F  V +  ++E  N  L+ ++++  G +T+ DCE +S+  S IL
Sbjct: 8   EKQTEELLEPIVAEQGFELVDVEYVKEAGNWYLRAYIDKP-GGITVDDCEVVSRRFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y  EVSSPG+ RP+ ++ DF+R  G  V      +   +++ +G +    +
Sbjct: 67  DEKDYIEDSYIFEVSSPGLGRPLKKEKDFIRSVGQEVEIRTYRAINRQKEFVGILKEFDQ 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E    +   + +IA+
Sbjct: 127 NTVTISYEDDSTQTFEKSEIAL 148


>gi|70726650|ref|YP_253564.1| hypothetical protein SH1649 [Staphylococcus haemolyticus JCSC1435]
 gi|82582359|sp|Q4L5W7|RIMP_STAHJ RecName: Full=Ribosome maturation factor rimP
 gi|68447374|dbj|BAE04958.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 155

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 79/155 (50%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++ ++I P+++E++F  V++   +E K+  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   ITEEVETIITPILDELNFELVEVEYTKEGKDHFLRISIDKE-GGVNLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ ++ D+       V   +       ++ +G +    
Sbjct: 63  MDENDPIPDMYYLDVASPGAERPIKKEKDYHNAIDKPVFVSLYAPIEGDKEWLGILKAVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +E +++ +      QI I  + +  AR  V
Sbjct: 123 DDTITMEVKEKAKTK----QIEIPRNKIAKARHAV 153


>gi|326402395|ref|YP_004282476.1| hypothetical protein ACMV_02470 [Acidiphilium multivorum AIU301]
 gi|325049256|dbj|BAJ79594.1| hypothetical protein ACMV_02470 [Acidiphilium multivorum AIU301]
          Length = 174

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 47/166 (28%), Positives = 96/166 (57%), Gaps = 9/166 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
            GL G I+ +I P +E + +  V+++++ ++   +QI  +R D   ++L DCE +S  +S
Sbjct: 9   TGLEGRIAELIAPGLESIGYELVRVAIMGKQTPTVQIMADRADQTPLSLDDCERISHLVS 68

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQKLIGKIM 136
            +LDV++ I   + LEVSS GIDRP+ R  D+ R+ GH+   ++ +  +  +++L G ++
Sbjct: 69  AVLDVDDPISSAWTLEVSSAGIDRPLTRVKDWNRYAGHLARIDLDVPTASGRKRLTGTVL 128

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           G  E    ++ +       +   + +    +  A+L++T+EL++A+
Sbjct: 129 GADEAQARVKLD-------SGETVDLPHAHIRRAKLVLTEELIKAT 167


>gi|152995056|ref|YP_001339891.1| hypothetical protein Mmwyl1_1025 [Marinomonas sp. MWYL1]
 gi|189038545|sp|A6VU27|RIMP_MARMS RecName: Full=Ribosome maturation factor rimP
 gi|150835980|gb|ABR69956.1| protein of unknown function DUF150 [Marinomonas sp. MWYL1]
          Length = 153

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           +  +I+PV+E + F    +  L   K+ +L+I++E D +  + + DC  +S+ +S ILDV
Sbjct: 8   LEELIRPVVEGLGFEFWGMEYLSLGKDSVLRIYIETDAEKGIDVEDCARVSRQVSSILDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G Y LEVSSPG+DRP+   + +  + G +V+  + +    ++K  G++MG     
Sbjct: 68  EDPITGEYNLEVSSPGLDRPLFSLAQYQAYIGSIVSLRLRVPFDGRRKFKGQLMGIESED 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +  ++         +  +  D +  A ++
Sbjct: 128 IVIRVDQE--------EYLLPIDLIDKANVV 150


>gi|77165587|ref|YP_344112.1| hypothetical protein Noc_2122 [Nitrosococcus oceani ATCC 19707]
 gi|254434762|ref|ZP_05048270.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
 gi|91208399|sp|Q3J9B4|RIMP_NITOC RecName: Full=Ribosome maturation factor rimP
 gi|76883901|gb|ABA58582.1| Protein of unknown function DUF150 [Nitrosococcus oceani ATCC
           19707]
 gi|207091095|gb|EDZ68366.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
          Length = 151

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 11/152 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE--EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            IS +++PV+  + +  V +  L    K  LL+I+++   G +T+ DCE  S  IS +LD
Sbjct: 6   RISELVEPVVAALGYELVGVERLSSVGKGALLRIYIDTPSG-ITIDDCERASHQISALLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE ++   Y LE+SSPG++RP+  +  F R+ G   +  +      +++  G + G    
Sbjct: 65  VEELMASAYTLEISSPGLNRPLFTEEHFKRFTGVEASITLSKPLNGRREFKGLLRGIRGD 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +         +   +  +  + +  ARL+
Sbjct: 125 RVVI--------LVAGEEFELPLEGIKKARLV 148


>gi|30995436|ref|NP_439434.2| hypothetical protein HI1282 [Haemophilus influenzae Rd KW20]
 gi|145633249|ref|ZP_01788980.1| hypothetical protein CGSHi3655_03431 [Haemophilus influenzae 3655]
 gi|145634373|ref|ZP_01790083.1| hypothetical protein CGSHiAA_06269 [Haemophilus influenzae PittAA]
 gi|148827022|ref|YP_001291775.1| hypothetical protein CGSHiGG_01570 [Haemophilus influenzae PittGG]
 gi|229845093|ref|ZP_04465228.1| hypothetical protein CGSHi6P18H1_00035 [Haemophilus influenzae
           6P18H1]
 gi|260581404|ref|ZP_05849218.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|260582502|ref|ZP_05850293.1| conserved hypothetical protein [Haemophilus influenzae NT127]
 gi|329123361|ref|ZP_08251926.1| YhbC family protein [Haemophilus aegyptius ATCC 11116]
 gi|34223728|sp|P45138|RIMP_HAEIN RecName: Full=Ribosome maturation factor rimP
 gi|166979796|sp|A5UF36|RIMP_HAEIG RecName: Full=Ribosome maturation factor rimP
 gi|144986095|gb|EDJ92685.1| hypothetical protein CGSHi3655_03431 [Haemophilus influenzae 3655]
 gi|145268353|gb|EDK08347.1| hypothetical protein CGSHiAA_06269 [Haemophilus influenzae PittAA]
 gi|148718264|gb|ABQ99391.1| hypothetical protein CGSHiGG_01570 [Haemophilus influenzae PittGG]
 gi|229811929|gb|EEP47623.1| hypothetical protein CGSHi6P18H1_00035 [Haemophilus influenzae
           6P18H1]
 gi|260091946|gb|EEW75895.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|260094482|gb|EEW78379.1| conserved hypothetical protein [Haemophilus influenzae NT127]
 gi|327471361|gb|EGF16813.1| YhbC family protein [Haemophilus aegyptius ATCC 11116]
          Length = 151

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +         + F ++  A ++
Sbjct: 123 KDMITLIVDDQEQI--------LVFGNIQKANVV 148


>gi|325661696|ref|ZP_08150319.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471949|gb|EGC75164.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 174

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P++E   F  V +  ++E  N  L+ ++++  G + + DCE +S+A S IL
Sbjct: 27  EQKTEELILPIVEGNGFELVDVEYVKEGSNWYLRAYIDKP-GGIAVDDCEVVSRAFSEIL 85

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ IE  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++  G +    +
Sbjct: 86  DREDYIEDTYIFEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRAIDRQKEFTGILKSYDK 145

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    K     +IA+
Sbjct: 146 DTVTIEYEDGEPKTFERSEIAL 167


>gi|301063518|ref|ZP_07204050.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300442457|gb|EFK06690.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 157

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +I ++++PV++EM    V +  +  +   +L+I+ +R  G +TL DC  +S+ I  +
Sbjct: 5   LLKEIEALVEPVLDEMGIELVDLEYVSGQGRQVLRIYADRPTG-ITLDDCAMVSREIGHL 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV ++++  Y LEVSSPG++RP+ R+ DFLR  G  +  +       ++   G +    
Sbjct: 64  LDVSDLLKHQYVLEVSSPGLNRPLKREKDFLRVVGQRIKVQTTAPLKGRRNFSGVLQSVQ 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                ++ +           + I   S+  A L+
Sbjct: 124 NGMLEIDLDG--------AVVQIPEQSIRKANLV 149


>gi|27467859|ref|NP_764496.1| hypothetical protein SE0941 [Staphylococcus epidermidis ATCC 12228]
 gi|57866747|ref|YP_188414.1| hypothetical protein SERP0832 [Staphylococcus epidermidis RP62A]
 gi|251810696|ref|ZP_04825169.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876303|ref|ZP_06285170.1| conserved hypothetical protein [Staphylococcus epidermidis SK135]
 gi|293366771|ref|ZP_06613447.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|34222847|sp|Q8CST6|RIMP_STAES RecName: Full=Ribosome maturation factor rimP
 gi|81674897|sp|Q5HPS6|RIMP_STAEQ RecName: Full=Ribosome maturation factor rimP
 gi|27315404|gb|AAO04538.1|AE016747_35 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57637405|gb|AAW54193.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|251805856|gb|EES58513.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295328|gb|EFA87855.1| conserved hypothetical protein [Staphylococcus epidermidis SK135]
 gi|291319072|gb|EFE59442.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329736648|gb|EGG72914.1| hypothetical protein SEVCU045_1081 [Staphylococcus epidermidis
           VCU045]
          Length = 155

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 80/155 (51%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++IQPV+ +++F  V I  ++E K+  L+I ++++ G + L DC   S+ IS +
Sbjct: 4   ITEQVEALIQPVLNDLNFELVDIEYVKEGKDHFLRISIDKE-GGVDLNDCTIASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ ++ DF       +   +       ++ +G +   +
Sbjct: 63  MDENDPIPEMYYLDVASPGAERPIKKEKDFYNAINQPIFVSLYAPIEGDKEWLGVLKSVN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +E +++ +      +I I  + +  AR  V
Sbjct: 123 DESINMEVKEKAKTK----EIEIPRNKIAKARHAV 153


>gi|114800120|ref|YP_758845.1| hypothetical protein HNE_0111 [Hyphomonas neptunium ATCC 15444]
 gi|123129251|sp|Q0C5Z8|RIMP_HYPNA RecName: Full=Ribosome maturation factor rimP
 gi|114740294|gb|ABI78419.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 199

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 8/162 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPIL 80
              + S++QPV E +    V++ +   +   LQI  ER  G    + DC  LS+ +SP+L
Sbjct: 8   ERRLLSLVQPVAEGLGMEIVRLRVQGGRRPHLQIMAERAGGAPTGIEDCARLSRGMSPVL 67

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +  + I   Y LEVS+PGIDRP+ R  DF RW GH V  E+      +++  G I G   
Sbjct: 68  EAADPISEAYTLEVSTPGIDRPLTRPGDFARWIGHAVRIELARPIDGRRRFTGTITGEDN 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
            G  +E +   +      +       +  A L++TDEL+ A+
Sbjct: 128 DGAHIELDDETKLVAAVHE-------MSRASLVLTDELIEAA 162


>gi|242242548|ref|ZP_04796993.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           W23144]
 gi|242233975|gb|EES36287.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           W23144]
 gi|319401445|gb|EFV89655.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 155

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 79/155 (50%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++IQPV+ ++ F  V I  ++E K+  L+I ++++ G + L DC   S+ IS +
Sbjct: 4   ITEQVEALIQPVLNDLDFELVDIEYVKEGKDHFLRISIDKE-GGVDLNDCTLASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ ++ DF       +   +       ++ +G +   +
Sbjct: 63  MDENDPIPEMYYLDVASPGAERPIKKEKDFYNAINQPIFVSLYAPIEGDKEWLGILKSVN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +E +++ +      +I I  + +  AR  V
Sbjct: 123 DESINMEVKEKAKTK----EIEIPRNKIAKARHAV 153


>gi|121998530|ref|YP_001003317.1| hypothetical protein Hhal_1751 [Halorhodospira halophila SL1]
 gi|166980218|sp|A1WXV3|RIMP_HALHL RecName: Full=Ribosome maturation factor rimP
 gi|121589935|gb|ABM62515.1| protein of unknown function DUF150 [Halorhodospira halophila SL1]
          Length = 151

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 86/155 (55%), Gaps = 9/155 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     + S+++P +  + +  V + L   K N  L+++++   G + L DCE +S  +S
Sbjct: 1   MSQIQTLHSLLEPTVTGLGYELVGVELTGAKGNRTLRVYIDTPAG-IRLEDCEAVSHQVS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ IEG Y LEVSSPG+DRP+ + +D+ R++G  +   ++     ++++ G ++G
Sbjct: 60  GLLDVEDPIEGAYNLEVSSPGLDRPIFKSADYDRFSGERIKLRLLELYEGRRRVKGVLLG 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                  +       +D++ +++ I  + +  ARL
Sbjct: 120 LDGEFVRV-------RDVDGVELRIPLELIDRARL 147


>gi|331084711|ref|ZP_08333799.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410805|gb|EGG90227.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 155

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P++E   F  V +  ++E  N  L+ ++++  G + + DCE +S+A S IL
Sbjct: 8   EQKTEELILPIVEGNGFELVDVEYVKEGSNWYLRAYIDKP-GGIAVDDCEVVSRAFSEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ IE  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++  G +    +
Sbjct: 67  DREDYIEDTYIFEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRAIDRQKEFTGILKSYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    K     +IA+
Sbjct: 127 DTVTIEYEDGEPKTFERSEIAL 148


>gi|91208372|sp|Q3KI86|RIMP_PSEPF RecName: Full=Ribosome maturation factor rimP
          Length = 158

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LD
Sbjct: 12  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 71  VEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKLRSPFEGRRNFQGLLRGV--- 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     +   +  +  D +  A +I +
Sbjct: 128 -----EEQDVVVQVENHEFLLPIDMIDKANIIPS 156


>gi|327441014|dbj|BAK17379.1| uncharacterized protein [Solibacillus silvestris StLB046]
          Length = 161

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 5/151 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  ++ P++EE+    V I  ++E ++  L+I+V+  +G + +  C ++S+ +S  LD  
Sbjct: 8   IEELVTPIVEELDLELVDIEFVKEGRDWFLRIYVDTPEGGIDILQCAQVSERLSEKLDEN 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + IE +Y LEVSSPG +RP+ ++ DF +  G  +  +      D ++  G +   ++   
Sbjct: 68  DPIEQNYYLEVSSPGAERPLKKQQDFEKAIGKYIYVKTYEPVKDLKEFYGYLRAYTDEFL 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E   +  K    + + I  + +  ARL +
Sbjct: 128 EMEFRIKTRK----VTVQIEKEKIAQARLAI 154


>gi|15614980|ref|NP_243283.1| hypothetical protein BH2417 [Bacillus halodurans C-125]
 gi|34223162|sp|Q9KA73|RIMP_BACHD RecName: Full=Ribosome maturation factor rimP
 gi|10175037|dbj|BAB06136.1| BH2417 [Bacillus halodurans C-125]
          Length = 156

 Score =  167 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 6/150 (4%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + +++P++E++      +   +E K+  L++F++ + G + L DC ++S+ +S  LD  +
Sbjct: 10  AELVKPILEQLDLELYDVEFKKEGKDWFLRVFIDSETG-VDLEDCGKVSERLSEKLDETD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            IE  Y LEVSSPG +RP+ R+ D LR  G  V   +      ++ L G++         
Sbjct: 69  PIEQAYFLEVSSPGAERPLKREKDLLRSIGKNVHVTLYEPIDGEKALEGELTEFDGETLT 128

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +E + +  K      + I +  + SARL V
Sbjct: 129 IEIKIKTRKK----TVTIPYAKVASARLAV 154


>gi|226946309|ref|YP_002801382.1| hypothetical protein Avin_42840 [Azotobacter vinelandii DJ]
 gi|259585700|sp|C1DFL1|RIMP_AZOVD RecName: Full=Ribosome maturation factor rimP
 gi|226721236|gb|ACO80407.1| Conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 145

 Score =  167 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 79/150 (52%), Gaps = 10/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + +    I  L + ++ LL+++++  DG + + DCE++S+ IS +LDVE
Sbjct: 1   MQALLAPVVEALGYECWGIEFLSQGRHSLLRVYIDHADG-ILIDDCEKVSRQISGVLDVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+     F+R  G  V   +      ++   G + G      
Sbjct: 60  DPISSEYTLEVSSPGMDRPLFTLEQFVRCAGEQVKIRLRSPFEGRRNFQGLLRGV----- 114

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +++     +++ +  +  D +  A +I
Sbjct: 115 ---EDQDVVVLVDDHEYLLPIDLIDKANII 141


>gi|197303043|ref|ZP_03168091.1| hypothetical protein RUMLAC_01770 [Ruminococcus lactaris ATCC
           29176]
 gi|197297898|gb|EDY32450.1| hypothetical protein RUMLAC_01770 [Ruminococcus lactaris ATCC
           29176]
          Length = 155

 Score =  167 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 72/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                ++++P++ E+ F  V +  ++E     L+ ++++  G + + DCE +S+  S IL
Sbjct: 8   EQQTETLLEPIVTELGFELVDVEYVKEGGTWYLRAYIDKP-GGIAVDDCEAVSRRFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I   Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++ +G +    +
Sbjct: 67  DEKDYIADSYVFEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRAIDRQKEFVGLLKAYDD 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
           +   +  E   E+  +   IA+
Sbjct: 127 STVTITYEDDTEQTFDRGDIAL 148


>gi|95929629|ref|ZP_01312371.1| protein of unknown function DUF150 [Desulfuromonas acetoxidans DSM
           684]
 gi|95134326|gb|EAT15983.1| protein of unknown function DUF150 [Desulfuromonas acetoxidans DSM
           684]
          Length = 187

 Score =  167 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 23/189 (12%)

Query: 1   MESTHFLHS-KYEPRIFGDMG---------LAGDISSVIQPVIEEMSFRSVQISLLEEKN 50
           M S  F H   + P +F + G         +   +  + +P++EE     V I    + +
Sbjct: 1   MRSELFAHFFLFYPFLFKEQGRCNDMSDEAVLNKVIELAEPILEEQGLELVDIEFFSQGS 60

Query: 51  -LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDF 109
             LL++F+++  G + L DC + S+ +S ILDVE +IE  YRLEVSSPGIDRP+ +++DF
Sbjct: 61  EWLLRLFIDKP-GGVNLDDCADCSRELSLILDVEEVIEVAYRLEVSSPGIDRPLKKEADF 119

Query: 110 LRWNGHVVACEIVLSSG------DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS 163
            R+ G +V  + + +         ++  IG+++G  +   F+E+  +        ++ + 
Sbjct: 120 ERFKGEMVRAKTLQAIDPDLRGYQRKTFIGELLGLEDDVVFIEQNDK-----EGGRVELP 174

Query: 164 FDSLLSARL 172
            DSL +  L
Sbjct: 175 LDSLETINL 183


>gi|167465393|ref|ZP_02330482.1| hypothetical protein Plarl_23005 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 140

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 9/143 (6%)

Query: 33  IEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           + E  F  V I  ++E  N  L+++V++ +G + + DC  +S+ +S  LD ++ I   Y 
Sbjct: 4   LTENGFELVDIEYVKEGSNWFLRVYVDKLEGGIDIEDCGRISEYLSAKLDEKDPIPTAYF 63

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           LEVSSPG +RP+ +  D  +  G  V         + ++  G+++        ++  K+ 
Sbjct: 64  LEVSSPGAERPLKKPQDIAKSVGKHVFITTYEPVDNAKEFEGELLSFDGETLVVKTAKKK 123

Query: 152 EKDMNELQIAISFDSLLSARLIV 174
                    +I ++ + SARL +
Sbjct: 124 S--------SIPYEKVASARLAI 138


>gi|330504829|ref|YP_004381698.1| hypothetical protein MDS_3915 [Pseudomonas mendocina NK-01]
 gi|328919115|gb|AEB59946.1| hypothetical protein MDS_3915 [Pseudomonas mendocina NK-01]
          Length = 152

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PVIE + ++   I  L + ++ LL++++++ DG + + DCE +S+ +S +LD
Sbjct: 6   EQLQALLAPVIEALGYQCWGIEFLSQGRHSLLRVYIDKADG-ILIDDCEIVSRQLSGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 65  VEDPISSEYTLEVSSPGMDRPLFTLEQFAAHVGEQVKIKLRSPFDGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +E+     +++ +  +  D +  A +I
Sbjct: 122 -----EEQDVVVQVDDHEYLLPIDLIDKANII 148


>gi|268686951|ref|ZP_06153813.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268627235|gb|EEZ59635.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 149

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 13/153 (8%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G + DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +
Sbjct: 4   GSSMDIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLSRV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             VE+I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G  
Sbjct: 61  FMVEDI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCE 118

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +  + +         + I   ++  ARL
Sbjct: 119 NDTVTVSFDGK--------TVQIELGNIDKARL 143


>gi|225572727|ref|ZP_03781482.1| hypothetical protein RUMHYD_00916 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039900|gb|EEG50146.1| hypothetical protein RUMHYD_00916 [Blautia hydrogenotrophica DSM
           10507]
          Length = 155

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 75/142 (52%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P++E   F  V +  ++E  N  L+++++++ G +T+ DCE +S+A S +L
Sbjct: 8   EQRAEEMILPLVEAQRFELVDVEYVKEAGNWYLRVYIDKE-GGITVDDCELISRAFSDLL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  + IE  Y LEVSSPG+ RP+ ++ D+ R  G  +          +++  G ++    
Sbjct: 67  DEADFIEDSYILEVSSPGLGRPLKKEKDYARSMGKELEIRTYRPIDKQKEFYGILLAYDN 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E++ +  +   + +IA+
Sbjct: 127 NSVTIEEQDKTRRTFEKKEIAL 148


>gi|289548940|ref|YP_003473928.1| hypothetical protein Thal_1169 [Thermocrinis albus DSM 14484]
 gi|289182557|gb|ADC89801.1| protein of unknown function DUF150 [Thermocrinis albus DSM 14484]
          Length = 157

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 83/157 (52%), Gaps = 7/157 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
             +  +   +  ++ P++++M +R   +    E+  +L+I ++++ G +T+ DCEE+S+ 
Sbjct: 3   INEKAIVERVKELVTPLVKKMGYRLFDVEFKPERGWVLRIILDKE-GGITIGDCEEVSRK 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+II   Y LEVSSPG++R + +   F  + G +V   +      ++++ G I
Sbjct: 62  VSALLDVEDIIPFSYMLEVSSPGLNRELTKPEHFEFFEGRLVRVILRQPVEGRREIKGYI 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G +E    LE++       +   + +    +  A L
Sbjct: 122 RGVTEGVLKLEEKD------SRNILHVPLSHVARANL 152


>gi|225570593|ref|ZP_03779618.1| hypothetical protein CLOHYLEM_06695 [Clostridium hylemonae DSM
           15053]
 gi|225160606|gb|EEG73225.1| hypothetical protein CLOHYLEM_06695 [Clostridium hylemonae DSM
           15053]
          Length = 155

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++EE  F  V +  ++E +   L+ ++++  G + + DCE++S+ +S IL
Sbjct: 8   EQKTEEILLPIVEEYGFELVDVEYVKEGSTWYLRAYIDKP-GGINIDDCEKVSRRLSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I+  Y +EVSSPG+ RP+ ++ DF R  G  V          +++  G +    +
Sbjct: 67  DEKDYIDDAYIMEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRMMDKQKEFFGILKEYDD 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
           +   + +E    K   +  IA+
Sbjct: 127 STVTIMQEDETLKTFAKSDIAL 148


>gi|20807844|ref|NP_623015.1| hypothetical protein TTE1397 [Thermoanaerobacter tengcongensis MB4]
 gi|34222922|sp|Q8RA33|RIMP_THETN RecName: Full=Ribosome maturation factor rimP
 gi|20516406|gb|AAM24619.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 151

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 3/137 (2%)

Query: 19  MGLAGDIS-SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAI 76
           M    +I+  ++ P++EE +F  V +   +E K+  L+++++++ G +TL DC+ +S+ +
Sbjct: 1   MSRIEEITKELVMPILEENNFELVDVEYKKEGKHWYLRVYIDKE-GGITLDDCQLVSEYL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + I+  Y LEVSSPG+DRP+    DF R  G  V   +      ++K  G+++
Sbjct: 60  SDRLDEVDPIDHSYILEVSSPGLDRPLKTPRDFKRNLGKEVEVSLYQPIDKRKKFTGELL 119

Query: 137 GTSETGFFLEKEKRGEK 153
             +     L  E    +
Sbjct: 120 EFTGDKIILLCEGEKRE 136


>gi|331090929|ref|ZP_08339771.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405151|gb|EGG84687.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 155

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++EE  F  V +  ++E     L+ ++++  G + + DCE +S+A S IL
Sbjct: 8   EQKTEELLLPIVEEHGFELVDVEYVKEGGTWYLRAYIDKP-GGIAVDDCEVVSRAFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++ +G + G  +
Sbjct: 67  DEKDYIEDTYIFEVSSPGLGRPLKKEKDFARSMGEEVEVRTYRAIDRQKEFVGILKGYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E   E+      IA+
Sbjct: 127 NTVTIEMEDGSERIFERNDIAL 148


>gi|24372785|ref|NP_716827.1| hypothetical protein SO_1202 [Shewanella oneidensis MR-1]
 gi|34222878|sp|Q8EHL7|RIMP_SHEON RecName: Full=Ribosome maturation factor rimP
 gi|24346870|gb|AAN54272.1|AE015564_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 151

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +E + F+   I  ++  K+ +L++F++ ++G + + DC  +S+ +S +
Sbjct: 4   LESRLADMLKVPVEALGFQLWGIEYVQAGKHSILRVFIDGENG-INIEDCANVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGSRNLKGAITQVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +    +        ++ ++ D++    +I
Sbjct: 123 GQMLSVNVNGK--------ELVVALDNIRKGNII 148


>gi|113969368|ref|YP_733161.1| hypothetical protein Shewmr4_1024 [Shewanella sp. MR-4]
 gi|114046595|ref|YP_737145.1| hypothetical protein Shewmr7_1089 [Shewanella sp. MR-7]
 gi|123029878|sp|Q0HLG3|RIMP_SHESM RecName: Full=Ribosome maturation factor rimP
 gi|123030836|sp|Q0HXR7|RIMP_SHESR RecName: Full=Ribosome maturation factor rimP
 gi|113884052|gb|ABI38104.1| protein of unknown function DUF150 [Shewanella sp. MR-4]
 gi|113888037|gb|ABI42088.1| protein of unknown function DUF150 [Shewanella sp. MR-7]
          Length = 151

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   +E + F+   I  ++  K+ +L++F++ ++G + + DC  +S+ +S +
Sbjct: 4   LESRLVDMLTVPVEALGFQLWGIEYVQAGKHSILRVFIDGENG-INIEDCANVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGSRNLKGAITQVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L    +        ++ ++ D++    +I
Sbjct: 123 GQMLSLNVNGK--------ELVVALDNIRKGNII 148


>gi|329724310|gb|EGG60822.1| hypothetical protein SEVCU144_1771 [Staphylococcus epidermidis
           VCU144]
          Length = 155

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 79/155 (50%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++IQPV+ +++F  V I  ++E K+  L+I ++++ G + L DC   S+ IS +
Sbjct: 4   ITEQVEALIQPVLNDLNFELVDIEYVKEGKDHFLRISIDKE-GGVDLNDCTIASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ +  DF       +   +       ++ +G +   +
Sbjct: 63  MDKNDPIPEMYYLDVASPGAERPIKKDKDFYNAINQPIFVSLYAPIEGDKEWLGVLKSVN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +E +++ +      +I I  + +  AR  V
Sbjct: 123 DESINMEVKEKAKTK----EIEIPRNKIAKARHAV 153


>gi|294624664|ref|ZP_06703334.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666763|ref|ZP_06731997.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292601020|gb|EFF45087.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603424|gb|EFF46841.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 196

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 12/158 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +                  ++   + I +D++  AR++
Sbjct: 125 LRIDAEA------DAVVFAVDGKDVQIGYDNIDKARIV 156


>gi|15602626|ref|NP_245698.1| hypothetical protein PM0761 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721059|gb|AAK02845.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 177

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I          ++++++++ G +T+ DC ++S+ +S I
Sbjct: 30  LEQKLQELLQSSVEDLGCELWGIECQRAGRYLTVRLYIDKE-GGVTVEDCADVSRQVSAI 88

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DR +     + R+ G  +   + +   D++K  GK+    
Sbjct: 89  LDVEDPIADKYNLEVSSPGLDRALFTLDQYQRYIGQEIVVHLRIPVLDRRKWQGKLEKIE 148

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + + +         + F ++  A +I
Sbjct: 149 NDMLTLIVDGQEQI--------LVFGNIQKANII 174


>gi|226313024|ref|YP_002772918.1| hypothetical protein BBR47_34370 [Brevibacillus brevis NBRC 100599]
 gi|254801675|sp|C0ZF55|RIMP_BREBN RecName: Full=Ribosome maturation factor rimP
 gi|226095972|dbj|BAH44414.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 152

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 9/155 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           + G ++ +I P++EE+    V I   +E  N  L++F++ + GN+ + DC  +S+ +S  
Sbjct: 4   VTGIVTELITPIVEEVGLELVDIEYKKEGSNWFLRVFIDNETGNIDIDDCRLVSEKLSEK 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LEVSSPG +RP+ +  DF +  G  V               G+++   
Sbjct: 64  LDEVDPIPTAYFLEVSSPGAERPLRKDKDFTKAVGRNVHITTKEPIEGATTFEGELVSYE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +++ K+           IS + + +AR+ +
Sbjct: 124 DGKLTVKEAKK--------TYVISQEQIDTARMAI 150


>gi|295396944|ref|ZP_06807066.1| protein of hypothetical function DUF150 [Aerococcus viridans ATCC
           11563]
 gi|294974797|gb|EFG50502.1| protein of hypothetical function DUF150 [Aerococcus viridans ATCC
           11563]
          Length = 179

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 10/178 (5%)

Query: 3   STHFLH-SKYEPR-IFGDMG-LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE 58
             HF H +K + R   G+M  +   +  ++QP+IE++ F    I  ++E K+  L+I+V+
Sbjct: 4   DAHFFHGNKVKIRKARGNMAKVTDQMQEIVQPIIEDLGFILFDIEFVKEGKSWFLRIYVD 63

Query: 59  RDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV 116
           +  G + + DC  +S+ IS  +D    + I   Y LEVSSPG +RP+    D     G  
Sbjct: 64  KPGGGIAIEDCVTVSEHISEAVDQLETDPIPQAYYLEVSSPGAERPLKNDDDVQAAIGEW 123

Query: 117 VACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           V      +   ++ + G+++  S+  + +E + +  K    + + +   ++   RL +
Sbjct: 124 VFLSFYQAIDGQKNIQGRLLSVSDDAYEVETKDKTRK----VAVTVEKSNVSLIRLAI 177


>gi|229013000|ref|ZP_04170165.1| hypothetical protein bmyco0001_34380 [Bacillus mycoides DSM 2048]
 gi|228748254|gb|EEL98114.1| hypothetical protein bmyco0001_34380 [Bacillus mycoides DSM 2048]
          Length = 173

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++ + G + + +C  +
Sbjct: 6   RLFMDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDSEKG-VEIEECGAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   
Sbjct: 65  SERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMFE 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           GK++        L    +  K  ++      F  +   +L + D LLR
Sbjct: 125 GKLLSYDGNTITLLLTIKTRKKKSK------FQWI---KLQMRDLLLR 163


>gi|326794268|ref|YP_004312088.1| ribosome maturation factor rimP [Marinomonas mediterranea MMB-1]
 gi|326545032|gb|ADZ90252.1| Ribosome maturation factor rimP [Marinomonas mediterranea MMB-1]
          Length = 153

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 84/151 (55%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           I  +I+PV+E + F+   +  + + K+ +L+IF+E D +  + + DC ++S+ +S ILDV
Sbjct: 8   IEELIRPVVEGLGFQFWGMEYISQGKHSVLRIFIETDKEKGIDVEDCAQVSRQVSSILDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G Y LEVSSPG+DRP+   S +  + G VVA ++ +    ++K  G++ G     
Sbjct: 68  EDPITGEYNLEVSSPGLDRPLFELSQYESYVGSVVALKLRVPFDGRRKFKGQLTGVEGDE 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +         +++ +  +  + +  A ++
Sbjct: 128 VVI--------LVDQEEYLLPIELIEKANIV 150


>gi|261400894|ref|ZP_05987019.1| hypothetical protein NEILACOT_04263 [Neisseria lactamica ATCC
           23970]
 gi|269209253|gb|EEZ75708.1| hypothetical protein NEILACOT_04263 [Neisseria lactamica ATCC
           23970]
          Length = 143

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TVSFDGK--------TVQIGLDNIDKARL 137


>gi|120597898|ref|YP_962472.1| hypothetical protein Sputw3181_1068 [Shewanella sp. W3-18-1]
 gi|146293930|ref|YP_001184354.1| hypothetical protein Sputcn32_2836 [Shewanella putrefaciens CN-32]
 gi|166977876|sp|A1RGX3|RIMP_SHESW RecName: Full=Ribosome maturation factor rimP
 gi|166988527|sp|A4Y9C2|RIMP_SHEPC RecName: Full=Ribosome maturation factor rimP
 gi|120557991|gb|ABM23918.1| protein of unknown function DUF150 [Shewanella sp. W3-18-1]
 gi|145565620|gb|ABP76555.1| protein of unknown function DUF150 [Shewanella putrefaciens CN-32]
 gi|319427307|gb|ADV55381.1| protein of unknown function DUF150 [Shewanella putrefaciens 200]
          Length = 151

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +E + F+   I  ++  K+ +L++F++ ++G + + DC   S+ +S +
Sbjct: 4   LESRLAEMLKVPVEALGFQLWGIEYVQAGKHSILRVFIDGENG-INIEDCANTSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAAYVGEDVKVQLTMPVAGSRNLKGAITKVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L    +        ++ ++ D++    +I
Sbjct: 123 GQMLSLNVNGK--------ELVVALDNIRKGNVI 148


>gi|329120393|ref|ZP_08249060.1| protein of hypothetical function DUF150 [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327462348|gb|EGF08674.1| protein of hypothetical function DUF150 [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 192

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  +    V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 51  DIQNLLEKTLPGLGCELVDHELTAQG--TLRVFIDKE-GGITIDDCAAVSNHLSRLFTVE 107

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++   +  LE+SSPG+DRP+ + +DF R+ G     +  L    ++  IG+I        
Sbjct: 108 DV--DYKNLEISSPGLDRPLKKAADFARFAGQEAKIKTRLPVDGQKNFIGRIESCDGQTV 165

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L  + +          A++ D++  ARL
Sbjct: 166 VLSFDGK--------TAALALDNIDKARL 186


>gi|34223026|sp|Q9CMQ4|RIMP_PASMU RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I          ++++++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLQELLQSSVEDLGCELWGIECQRAGRYLTVRLYIDKE-GGVTVEDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DR +     + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRALFTLDQYQRYIGQEIVVHLRIPVLDRRKWQGKLEKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + + +         + F ++  A +I
Sbjct: 123 NDMLTLIVDGQEQI--------LVFGNIQKANII 148


>gi|256821529|ref|YP_003145492.1| hypothetical protein Kkor_0303 [Kangiella koreensis DSM 16069]
 gi|256795068|gb|ACV25724.1| protein of unknown function DUF150 [Kangiella koreensis DSM 16069]
          Length = 150

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M    ++  +I+P +E   F    +  L + K+ +L++F++ ++G +++ +C E+S  +S
Sbjct: 1   MARNAELEKIIRPAVEAAGFEFWGLEHLAQGKHSVLRVFIDHENG-ISVDNCAEVSHQVS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I+G Y LE+SSPG+DRP+  +  F R+ G     ++ +    ++K  G I  
Sbjct: 60  GVLDVEDPIKGLYNLEISSPGMDRPLFNEQQFARYVGEDAEVKLSVPLNGRRKFKGTIEQ 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  L  +             I+   +  A L+
Sbjct: 120 VEAGVLLLLVDGEVY--------EINCHQIDKAHLV 147


>gi|149909282|ref|ZP_01897938.1| hypothetical protein PE36_05678 [Moritella sp. PE36]
 gi|149807599|gb|EDM67547.1| hypothetical protein PE36_05678 [Moritella sp. PE36]
          Length = 152

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 71/135 (52%), Gaps = 2/135 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +++P +E + F  V I      K+  L ++++ ++G + + DC ++S  +S 
Sbjct: 3   SLEQTLTDLLEPTVEMLGFELVGIEFTRAGKHSTLLVYIDHENG-IFVDDCSKVSHQLSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           I+DVE+ I   Y LEVSSPG++RP+ + + +  + G  +   + ++   ++KL G I   
Sbjct: 62  IMDVEDPISTEYFLEVSSPGMERPLFKVAHYQEYCGSEIKALLRMAVNGRRKLRGVIKSV 121

Query: 139 SETGFFLEKEKRGEK 153
                 +  + + E 
Sbjct: 122 DGDMITVTIDGKDEV 136


>gi|59801638|ref|YP_208350.1| hypothetical protein NGO1284 [Neisseria gonorrhoeae FA 1090]
 gi|254494078|ref|ZP_05107249.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268595171|ref|ZP_06129338.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268597520|ref|ZP_06131687.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268599675|ref|ZP_06133842.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268604050|ref|ZP_06138217.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268682509|ref|ZP_06149371.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684673|ref|ZP_06151535.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|293398727|ref|ZP_06642903.1| hypothetical protein NGNG_02048 [Neisseria gonorrhoeae F62]
 gi|75355764|sp|Q5F799|RIMP_NEIG1 RecName: Full=Ribosome maturation factor rimP
 gi|259585809|sp|B4RMZ1|RIMP_NEIG2 RecName: Full=Ribosome maturation factor rimP
 gi|59718533|gb|AAW89938.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226513118|gb|EEH62463.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548560|gb|EEZ43978.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268551308|gb|EEZ46327.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583806|gb|EEZ48482.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268588181|gb|EEZ52857.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268622793|gb|EEZ55193.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268624957|gb|EEZ57357.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|291610867|gb|EFF39966.1| hypothetical protein NGNG_02048 [Neisseria gonorrhoeae F62]
          Length = 149

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 13/153 (8%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G + DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +
Sbjct: 4   GSSMDIQTILEKTLPGLGYELVDFELAAQG--TLRVFIDKE-GGITVEDCATVSNHLSRV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             VE+I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G  
Sbjct: 61  FMVEDI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCE 118

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +  + +         + I   ++  ARL
Sbjct: 119 NDTVTVSFDGK--------TVQIELGNIDKARL 143


>gi|307825108|ref|ZP_07655329.1| protein of unknown function DUF150 [Methylobacter tundripaludum
           SV96]
 gi|307733856|gb|EFO04712.1| protein of unknown function DUF150 [Methylobacter tundripaludum
           SV96]
          Length = 161

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 11/164 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++I+P++E + +  V I      K+ LL+I+++ D+G + + DC ++S  IS ++DVE
Sbjct: 8   LVNLIEPIVEGLGYECVGIEYNPHPKHGLLRIYIDSDNG-ILVEDCTKVSHQISGVMDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G+Y LE+SSPG DRP  + S F R+ G  V   +  +   ++K+ G I    +   
Sbjct: 67  DPILGNYHLEISSPGEDRPFFKVSQFERYIGSTVLVHLFKAIDGRRKITGLIEKVEDDII 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
            L+          E    + F ++  ARL+    L+     +  
Sbjct: 127 TLKD--------GEQVFEVPFIAMSKARLVPEY-LIEKGGRSGK 161


>gi|145637798|ref|ZP_01793447.1| hypothetical protein CGSHiHH_01594 [Haemophilus influenzae PittHH]
 gi|145268991|gb|EDK08945.1| hypothetical protein CGSHiHH_01594 [Haemophilus influenzae PittHH]
          Length = 151

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L    + +         + F ++  A ++
Sbjct: 123 KDMITLIVGDQEQI--------LVFGNIQKANIV 148


>gi|119477403|ref|ZP_01617594.1| hypothetical protein GP2143_00477 [marine gamma proteobacterium
           HTCC2143]
 gi|119449329|gb|EAW30568.1| hypothetical protein GP2143_00477 [marine gamma proteobacterium
           HTCC2143]
          Length = 151

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 74/150 (49%), Gaps = 10/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ PV E + ++   +  L   K  +++I+++  DG + + DC ++S+ +  + DVE
Sbjct: 8   LADLVAPVAEALGYQLWGVEYLSHGKQSVVRIYIDSPDG-IDVDDCAKVSRQVGSVFDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G Y LEVSSPG+DRP+     +  + G  V  ++  +   ++   G++        
Sbjct: 67  DPIMGEYTLEVSSPGMDRPLFALEQYRPYVGEQVKIKLRTAFDGRRNFSGRMTAIEG--- 123

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                      +++ +  + F+ +  A ++
Sbjct: 124 -----DDVVVAVDDEEYLLPFELIDKANIV 148


>gi|146308625|ref|YP_001189090.1| hypothetical protein Pmen_3610 [Pseudomonas mendocina ymp]
 gi|166990870|sp|A4XYE2|RIMP_PSEMY RecName: Full=Ribosome maturation factor rimP
 gi|145576826|gb|ABP86358.1| protein of unknown function DUF150 [Pseudomonas mendocina ymp]
          Length = 152

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PVIE + ++   I  L + ++ LL++++++ DG + + DCE +S+ +S +LD
Sbjct: 6   EQLQALLAPVIEALGYQCWGIEFLSQGRHSLLRVYIDKADG-ILIDDCEIVSRQLSGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 65  VEDPISSEYTLEVSSPGMDRPLFTLEQFAAHVGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +E+     +++ +  +  D +  A +I
Sbjct: 122 -----EEQDVVVQVDDHEYLLPIDLIDKANII 148


>gi|66047409|ref|YP_237250.1| hypothetical protein Psyr_4182 [Pseudomonas syringae pv. syringae
           B728a]
 gi|71733923|ref|YP_276313.1| hypothetical protein PSPPH_4191 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289676022|ref|ZP_06496912.1| hypothetical protein PsyrpsF_22296 [Pseudomonas syringae pv.
           syringae FF5]
 gi|34223096|sp|P95578|RIMP_PSEU2 RecName: Full=Ribosome maturation factor rimP
 gi|91208357|sp|Q48E75|RIMP_PSE14 RecName: Full=Ribosome maturation factor rimP
 gi|1835603|gb|AAC45133.1| 15 kDa protein [Pseudomonas syringae pv. syringae]
 gi|63258116|gb|AAY39212.1| Protein of unknown function DUF150 [Pseudomonas syringae pv.
           syringae B728a]
 gi|71554476|gb|AAZ33687.1| YhbC-like protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 158

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LD
Sbjct: 12  EQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 71  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGV--- 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I T
Sbjct: 128 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPT 156


>gi|161870485|ref|YP_001599657.1| hypothetical protein NMCC_1541 [Neisseria meningitidis 053442]
 gi|259585798|sp|A9M1D3|RIMP_NEIM0 RecName: Full=Ribosome maturation factor rimP
 gi|161596038|gb|ABX73698.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 143

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TISFDGK--------TVQIGLDNIDKARL 137


>gi|257482263|ref|ZP_05636304.1| hypothetical protein PsyrptA_03277 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289624600|ref|ZP_06457554.1| hypothetical protein PsyrpaN_05581 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|298488454|ref|ZP_07006485.1| 30S ribosomal subunit maturation factor [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|302185430|ref|ZP_07262103.1| hypothetical protein Psyrps6_03769 [Pseudomonas syringae pv.
           syringae 642]
 gi|298157079|gb|EFH98168.1| 30S ribosomal subunit maturation factor [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322530|gb|EFW78623.1| hypothetical protein PsgB076_21417 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330001|gb|EFW85988.1| hypothetical protein PsgRace4_10252 [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330868244|gb|EGH02953.1| ribosome maturation protein RimP [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330875222|gb|EGH09371.1| ribosome maturation protein RimP [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330888660|gb|EGH21321.1| ribosome maturation protein RimP [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330895307|gb|EGH27645.1| ribosome maturation protein RimP [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330937944|gb|EGH41731.1| ribosome maturation protein RimP [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330950307|gb|EGH50567.1| ribosome maturation protein RimP [Pseudomonas syringae Cit 7]
 gi|330969649|gb|EGH69715.1| ribosome maturation protein RimP [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330981088|gb|EGH79191.1| ribosome maturation protein RimP [Pseudomonas syringae pv. aptata
           str. DSM 50252]
 gi|330987053|gb|EGH85156.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011497|gb|EGH91553.1| ribosome maturation protein RimP [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 152

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LD
Sbjct: 6   EQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I T
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPT 150


>gi|237798561|ref|ZP_04587022.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|237803808|ref|ZP_04591393.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|237805250|ref|ZP_04591954.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021414|gb|EGI01471.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331025788|gb|EGI05844.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331026358|gb|EGI06413.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 152

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LD
Sbjct: 6   EQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I T
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDLIDKANIIPT 150


>gi|259586222|sp|C3K261|RIMP_PSEFS RecName: Full=Ribosome maturation factor rimP
          Length = 158

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I    + ++ +L+++++++ G + + DC  +S+ IS +LD
Sbjct: 12  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDKE-GGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 71  VEDPISVEYTLEVSSPGMERPLFTIDQFAKFAGEQVKIKLRSPFEGRRNFQGLLRGV--- 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I +
Sbjct: 128 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPS 156


>gi|145630837|ref|ZP_01786615.1| hypothetical protein CGSHi22421_10572 [Haemophilus influenzae
           R3021]
 gi|144983719|gb|EDJ91179.1| hypothetical protein CGSHi22421_10572 [Haemophilus influenzae
           R3021]
          Length = 151

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRVGRFITVRLFIDK-DGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +         + F ++  A ++
Sbjct: 123 KDMITLIVDDQEQI--------LVFGNIQKANVV 148


>gi|28378677|ref|NP_785569.1| hypothetical protein lp_2044 [Lactobacillus plantarum WCFS1]
 gi|254556875|ref|YP_003063292.1| hypothetical protein JDM1_1708 [Lactobacillus plantarum JDM1]
 gi|300768188|ref|ZP_07078093.1| protein of hypothetical function DUF150 [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308180816|ref|YP_003924944.1| hypothetical protein LPST_C1634 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|34223110|sp|Q88VK3|RIMP_LACPL RecName: Full=Ribosome maturation factor rimP
 gi|28271513|emb|CAD64418.1| unknown [Lactobacillus plantarum WCFS1]
 gi|254045802|gb|ACT62595.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
 gi|300494252|gb|EFK29415.1| protein of hypothetical function DUF150 [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308046307|gb|ADN98850.1| hypothetical protein LPST_C1634 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 158

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I  V   ++    F  V +  + E     L++++++  G + + +C  +S  +S 
Sbjct: 4   NVVETIQPVAAAIVSAHQFELVDLEFVREGQSWYLRLYIDKP-GGINIEECAMVSDELSE 62

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ +++DF    G  V   +      K+   G + 
Sbjct: 63  KLDAMEPDPIPQAYFLEVSSPGAERPLKKEADFQNAIGKYVHVGLYQKLDGKKIFEGDLT 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             + T   ++   +         + I+ + +  ARL V
Sbjct: 123 AVTPTTLTIDYLDKTRHK----TVTINREQISQARLAV 156


>gi|190575264|ref|YP_001973109.1| hypothetical protein Smlt3391 [Stenotrophomonas maltophilia K279a]
 gi|226703805|sp|B2FN92|RIMP_STRMK RecName: Full=Ribosome maturation factor rimP
 gi|190013186|emb|CAQ46819.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 196

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 12/158 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A DI++++ P +  +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L   ++++L G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFNLEQFARHQGESAKVTLKLPQDNRRRLQGRI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             T E    +         +++ ++ +S D++  AR++
Sbjct: 125 EATDEAAGTITF------IVDKTEVVVSADNIDKARIM 156


>gi|300113655|ref|YP_003760230.1| hypothetical protein Nwat_0966 [Nitrosococcus watsonii C-113]
 gi|299539592|gb|ADJ27909.1| protein of unknown function DUF150 [Nitrosococcus watsonii C-113]
          Length = 151

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 11/154 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE--EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
              IS ++ PV+  + +  V +  L    K +LL+I+++   G +T+ DCE  S  IS +
Sbjct: 4   DKRISKLVGPVVAALGYELVGVERLSSVGKGVLLRIYIDAPSG-VTVNDCERTSHQISAL 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE  +   Y LE+SSPG+DRP+  +  F R+ G   +  +      +++  G + G  
Sbjct: 63  LDVEEPMASAYTLEISSPGLDRPLFTEEHFKRFTGVEASITLSEPLNGRREFKGLLQGIR 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +         +   +  +  + +  ARLI
Sbjct: 123 GDRVVI--------LVAGEEFELPLEGIKKARLI 148


>gi|166712600|ref|ZP_02243807.1| hypothetical protein Xoryp_14385 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 196

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P ++ +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVDSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHAGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +                  ++   + I FD++  AR+
Sbjct: 125 LRIDAEA------GAVVFAVDGKDVQIGFDNIDKARI 155


>gi|29654725|ref|NP_820417.1| hypothetical cytosolic protein [Coxiella burnetii RSA 493]
 gi|161830413|ref|YP_001597278.1| hypothetical protein COXBURSA331_A1602 [Coxiella burnetii RSA 331]
 gi|34223106|sp|Q83BR9|RIMP_COXBU RecName: Full=Ribosome maturation factor rimP
 gi|189038961|sp|A9N8V8|RIMP_COXBR RecName: Full=Ribosome maturation factor rimP
 gi|29541993|gb|AAO90931.1| hypothetical cytosolic protein [Coxiella burnetii RSA 493]
 gi|161762280|gb|ABX77922.1| conserved hypothetical protein [Coxiella burnetii RSA 331]
          Length = 153

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 11/157 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V           +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATTILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+     +      +++  G ++ 
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGNKAKIRLREPREGQRQFRGMVVA 119

Query: 138 TS-ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              E    L+ + +  K        +S   +  A LI
Sbjct: 120 VDNEEQVTLQLDNKILK--------VSLGEIEKANLI 148


>gi|313667983|ref|YP_004048267.1| hypothetical protein NLA_6440 [Neisseria lactamica ST-640]
 gi|309378388|emb|CBX22989.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313005445|emb|CBN86880.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 143

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TVSFDGK--------TVQIGLDNIDKARL 137


>gi|167630354|ref|YP_001680853.1| conserved hypothetical protein, possible yhbc family
           [Heliobacterium modesticaldum Ice1]
 gi|259585782|sp|B0THQ9|RIMP_HELMI RecName: Full=Ribosome maturation factor rimP
 gi|167593094|gb|ABZ84842.1| conserved hypothetical protein, possible yhbc family
           [Heliobacterium modesticaldum Ice1]
          Length = 154

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 10/157 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
           G + L   +S+   P++EE+    + +  ++E  N  L+IF++++ G + + DC+E+S+ 
Sbjct: 3   GKVRLEDRVSAWAMPIVEELGLELIDVEWVKEGGNWYLRIFIDKEAG-IEMEDCQEVSRR 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I  ILD E+ +   Y LEVSSPGIDRP+    D+ R+ G  V           ++ +G++
Sbjct: 62  IDEILDREDPVAHSYSLEVSSPGIDRPLKSDRDYERFRGETVRITTFAPVMGAKEHLGEL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G +ET   + K        N+ ++AI    + S RL
Sbjct: 122 AGKNETSILIRK--------NDEEMAIPLTQVSSVRL 150


>gi|296315230|ref|ZP_06865171.1| hypothetical protein NEIPOLOT_02434 [Neisseria polysaccharea ATCC
           43768]
 gi|296837868|gb|EFH21806.1| hypothetical protein NEIPOLOT_02434 [Neisseria polysaccharea ATCC
           43768]
          Length = 143

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TVSFDGK--------TVQIGLDNIDKARL 137


>gi|189424725|ref|YP_001951902.1| hypothetical protein Glov_1666 [Geobacter lovleyi SZ]
 gi|226736404|sp|B3EAE4|RIMP_GEOLS RecName: Full=Ribosome maturation factor rimP
 gi|189420984|gb|ACD95382.1| protein of unknown function DUF150 [Geobacter lovleyi SZ]
          Length = 159

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 83/157 (52%), Gaps = 14/157 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + +++QP+++ M    V++   +  ++ LL++F+++ DG + L DC E+S+ +S  L
Sbjct: 7   IQRVETLLQPILDAMGLELVELEFKKVGRSYLLRVFIDKPDG-VNLDDCAEVSRELSVQL 65

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQKLIGKI 135
           DVE+ I   Y LEVSSPG+DRP+ ++ DF+R+ G +   +      D     ++  +G +
Sbjct: 66  DVEDCIASRYTLEVSSPGLDRPLKKEQDFIRYQGRLAVVKTTELLKDEKGSPRKTFLGFL 125

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  +    +  ++         Q  I +D +  A L
Sbjct: 126 EGVEDGEVMIRLKE-------GPQARIPWDKIAKAHL 155


>gi|68250160|ref|YP_249272.1| hypothetical protein NTHI1846 [Haemophilus influenzae 86-028NP]
 gi|145629345|ref|ZP_01785144.1| hypothetical protein CGSHi22121_11095 [Haemophilus influenzae
           22.1-21]
 gi|145641319|ref|ZP_01796898.1| hypothetical protein CGSHiR3021_04472 [Haemophilus influenzae
           R3021]
 gi|81335416|sp|Q4QK35|RIMP_HAEI8 RecName: Full=Ribosome maturation factor rimP
 gi|68058359|gb|AAX88612.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|144978848|gb|EDJ88571.1| hypothetical protein CGSHi22121_11095 [Haemophilus influenzae
           22.1-21]
 gi|145273862|gb|EDK13729.1| hypothetical protein CGSHiR3021_04472 [Haemophilus influenzae
           22.4-21]
 gi|301170016|emb|CBW29620.1| conserved protein [Haemophilus influenzae 10810]
          Length = 151

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  ++++      I        + +++F++++ G +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVKDLGCELWGIECQRVGRFMTVRLFIDKE-GGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +         + F ++  A ++
Sbjct: 123 KDMITLIVDDQEQI--------LVFGNIQKANVV 148


>gi|69246861|ref|ZP_00604153.1| Protein of unknown function DUF150 [Enterococcus faecium DO]
 gi|257878527|ref|ZP_05658180.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257882945|ref|ZP_05662598.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257884341|ref|ZP_05663994.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257889276|ref|ZP_05668929.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257894714|ref|ZP_05674367.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|258615948|ref|ZP_05713718.1| hypothetical protein EfaeD_09568 [Enterococcus faecium DO]
 gi|260560112|ref|ZP_05832290.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|261207400|ref|ZP_05922086.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289566678|ref|ZP_06447095.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|293556648|ref|ZP_06675213.1| hypothetical protein EfmE1039_1955 [Enterococcus faecium E1039]
 gi|293560201|ref|ZP_06676703.1| hypothetical protein EfmE1162_0858 [Enterococcus faecium E1162]
 gi|293567722|ref|ZP_06679064.1| hypothetical protein EfmE1071_0525 [Enterococcus faecium E1071]
 gi|294613938|ref|ZP_06693873.1| hypothetical protein EfmE1636_0063 [Enterococcus faecium E1636]
 gi|294618724|ref|ZP_06698256.1| hypothetical protein EfmE1679_1593 [Enterococcus faecium E1679]
 gi|294620762|ref|ZP_06699969.1| hypothetical protein EfmU0317_0176 [Enterococcus faecium U0317]
 gi|68195042|gb|EAN09505.1| Protein of unknown function DUF150 [Enterococcus faecium DO]
 gi|257812755|gb|EEV41513.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257818603|gb|EEV45931.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257820179|gb|EEV47327.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257825636|gb|EEV52262.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257831093|gb|EEV57700.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|260073947|gb|EEW62271.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|260078291|gb|EEW65996.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289161537|gb|EFD09420.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291589565|gb|EFF21371.1| hypothetical protein EfmE1071_0525 [Enterococcus faecium E1071]
 gi|291593213|gb|EFF24787.1| hypothetical protein EfmE1636_0063 [Enterococcus faecium E1636]
 gi|291595037|gb|EFF26382.1| hypothetical protein EfmE1679_1593 [Enterococcus faecium E1679]
 gi|291599742|gb|EFF30752.1| hypothetical protein EfmU0317_0176 [Enterococcus faecium U0317]
 gi|291601183|gb|EFF31470.1| hypothetical protein EfmE1039_1955 [Enterococcus faecium E1039]
 gi|291605873|gb|EFF35305.1| hypothetical protein EfmE1162_0858 [Enterococcus faecium E1162]
          Length = 157

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 79/158 (50%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ P+++E +F  V++  ++E K+  L++F++++ G + + +C  +S+ +S 
Sbjct: 3   SVVETVTEMVTPILDEQNFELVEVEFVKEGKSWFLRVFIDKE-GGIDIEECAFVSEKLSE 61

Query: 79  ILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD  +   I   Y LEVSSPG +RP+ ++SD+ +  G  V   +      +++  G + 
Sbjct: 62  KLDAADPDPIPQAYFLEVSSPGAERPLKKESDYEKALGDYVHVSLYQPVDGEKQYEGFLQ 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   L    +      E ++     ++  ARL +
Sbjct: 122 SFDAEQLTL----KIRIKTREKELTFDRKNIAKARLAI 155


>gi|255284073|ref|ZP_05348628.1| hypothetical protein BRYFOR_09459 [Bryantella formatexigens DSM
           14469]
 gi|255265418|gb|EET58623.1| hypothetical protein BRYFOR_09459 [Bryantella formatexigens DSM
           14469]
          Length = 201

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 72/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +++QP+++   F  V +  ++E     L+ ++++  G +T+ DCE +S+A + IL
Sbjct: 54  EQKTEAILQPIVDANGFELVDVEYVKEGGSWYLRAYIDKP-GGITVDDCELVSRAANDIL 112

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ +E  Y  EVSSPG+ RP+ ++ DF+R  G  V      +   +++  G +    +
Sbjct: 113 DEQDFVEESYIFEVSSPGLGRPLKKEKDFVRSIGEEVEIRTFRAIEKQKEFYGILKAFDK 172

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   E  +    IA+
Sbjct: 173 ESVTIVLEDESEMQIARADIAL 194


>gi|160871632|ref|ZP_02061764.1| 15 kDa protein [Rickettsiella grylli]
 gi|159120431|gb|EDP45769.1| 15 kDa protein [Rickettsiella grylli]
          Length = 153

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 85/149 (57%), Gaps = 10/149 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I + + P IE + +       L E     L+I+++ + G +TL DCE +S+ +  +LDVE
Sbjct: 8   IEARLSPTIEALGYELWACVYLREGQKNRLRIYIDSEKG-ITLSDCERVSRQVGALLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++++GHY LEVSSPG+DRP++++  F R+ G+ +   +     +++K  G +  T  +G 
Sbjct: 67  DLLQGHYHLEVSSPGLDRPLIKEDHFQRYVGYPIHVFLQSPIDNQRKFKGLLQSTRASGI 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L +E +        +  +++D++L A +
Sbjct: 127 VLNREGK--------EFVLTWDNILHANV 147


>gi|158320556|ref|YP_001513063.1| hypothetical protein Clos_1524 [Alkaliphilus oremlandii OhILAs]
 gi|259585693|sp|A8MHI0|RIMP_ALKOO RecName: Full=Ribosome maturation factor rimP
 gi|158140755|gb|ABW19067.1| protein of unknown function DUF150 [Alkaliphilus oremlandii OhILAs]
          Length = 154

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 22  AGDISS-VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
              I+  ++ P+I+  +F  V +   +E  N  L+I++++  G +TL DC+++S+ +   
Sbjct: 6   VEKITERLVMPIIQNENFELVDLEYKKEGSNWYLRIYIDKP-GGITLDDCQKVSEQLGEE 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ I  +Y LEVSSPG+DRP+ + SDF+R+ G +V  ++  +    + + G+++G  
Sbjct: 65  LDREDPISENYFLEVSSPGLDRPLKKDSDFIRFAGEIVEVKLYEALNGNKVIEGELVGLE 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    +     G        + +  + +   RL V
Sbjct: 125 ENMIKINVANVGL-------LELPKEKVALTRLAV 152


>gi|330958051|gb|EGH58311.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 152

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LD
Sbjct: 6   EQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPITTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I T
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDLIDKANIIPT 150


>gi|261392136|emb|CAX49636.1| conserved hypothetical protein [Neisseria meningitidis 8013]
          Length = 149

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 13/153 (8%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G + DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +
Sbjct: 4   GSSMDIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLSRV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             VE+I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G  
Sbjct: 61  FMVEDI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCE 118

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +  + +         + I   ++  ARL
Sbjct: 119 NDTVTVSFDGK--------TVQIELGNIDKARL 143


>gi|257869191|ref|ZP_05648844.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257803355|gb|EEV32177.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 157

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 74/147 (50%), Gaps = 8/147 (5%)

Query: 31  PVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIE 87
           P++E  +F  V++  ++E K+  L++F++++ G + + +C  +S+ +S  LD    + I 
Sbjct: 14  PILEAQNFELVEVEFVKEGKSWFLRVFIDKE-GGIDIEECAFVSEQLSDKLDACDPDPIP 72

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG +RP+ ++ D+ R  G  +   +      +++  G +    E    +  
Sbjct: 73  QAYFLEVSSPGAERPLKKEEDYHRAVGEYIHLSLYQPVEGEKQFEGFLQSFDEEQLVI-- 130

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
             +      E ++ I   ++  ARL +
Sbjct: 131 --KIRIKTREKELTIERKNIAKARLAI 155


>gi|289665187|ref|ZP_06486768.1| hypothetical protein XcampvN_19489 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667365|ref|ZP_06488440.1| hypothetical protein XcampmN_02313 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 196

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 12/157 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHAGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +                  ++  ++ I FD++  AR+
Sbjct: 125 LRIDAEA------GAVVFAVDGKEVQIGFDNIDKARI 155


>gi|289578390|ref|YP_003477017.1| hypothetical protein Thit_1191 [Thermoanaerobacter italicus Ab9]
 gi|297544666|ref|YP_003676968.1| hypothetical protein Tmath_1242 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528103|gb|ADD02455.1| protein of unknown function DUF150 [Thermoanaerobacter italicus
           Ab9]
 gi|296842441|gb|ADH60957.1| protein of unknown function DUF150 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 151

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 83/152 (54%), Gaps = 7/152 (4%)

Query: 19  MGLAGDIS-SVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           M     I+  ++ P++E+ +F  V +   +E N   L+++++++ G +TL DC+ +S+ +
Sbjct: 1   MSKIEQIAKDLVTPILEKNNFELVDVEYKKEGNNWYLRVYIDKE-GGITLDDCQLVSEYL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++
Sbjct: 60  SDRLDEVDPIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYSPIDKRKKFEGELI 119

Query: 137 GTSETGFFL----EKEKRGEKDMNELQIAISF 164
             +     +    E+++   K+++ ++  I F
Sbjct: 120 EFTGDKIIILYNGERKEFDMKNVSLVKPVIKF 151


>gi|220916333|ref|YP_002491637.1| protein of unknown function DUF150 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|259585694|sp|B8JFY3|RIMP_ANAD2 RecName: Full=Ribosome maturation factor rimP
 gi|219954187|gb|ACL64571.1| protein of unknown function DUF150 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 171

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 17/165 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G+  +A  +  +++PV+E   +  V++          L++F+++  G + + DC+ +S+
Sbjct: 4   IGEQSIAEQVRRLLEPVLERDGYELVEVEWARLAGRWTLRVFIDKA-GGVGIDDCQAVSK 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD------- 127
            + PILDV ++IE  Y LEVSSPG+DRP+ +  DF R+ G  V  +              
Sbjct: 63  TVEPILDVADVIEPAYDLEVSSPGLDRPLRKPGDFDRYAGQRVHVKAYGPVAGTAPGAPA 122

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++   G + G  +    L        D++ +   +  D +  A L
Sbjct: 123 RKHWTGVLKGFRDGAVEL--------DVDGVLHRVPHDQIAKANL 159


>gi|227551757|ref|ZP_03981806.1| protein of hypothetical function DUF150 [Enterococcus faecium
           TX1330]
 gi|257887082|ref|ZP_05666735.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257895647|ref|ZP_05675300.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|257898237|ref|ZP_05677890.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|293377742|ref|ZP_06623931.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
 gi|293570614|ref|ZP_06681665.1| hypothetical protein EfmE980_0412 [Enterococcus faecium E980]
 gi|227179062|gb|EEI60034.1| protein of hypothetical function DUF150 [Enterococcus faecium
           TX1330]
 gi|257823136|gb|EEV50068.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257832212|gb|EEV58633.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|257836149|gb|EEV61223.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|291609285|gb|EFF38556.1| hypothetical protein EfmE980_0412 [Enterococcus faecium E980]
 gi|292643742|gb|EFF61863.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
          Length = 157

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 78/158 (49%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ P+++E  F  V++  ++E K+  L++F++++ G + + +C  +S+ +S 
Sbjct: 3   SVVETVTEMVTPILDEQHFELVEVEFVKEGKSWFLRVFIDKE-GGIDIEECAFVSEKLSE 61

Query: 79  ILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD  +   I   Y LEVSSPG +RP+ ++SD+ +  G  V   +      +++  G + 
Sbjct: 62  KLDAADPDPIPQAYFLEVSSPGAERPLKKESDYEKALGDYVHVSLYQPVDGEKQYEGFLQ 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   L    +      E ++     ++  ARL +
Sbjct: 122 SFDAEQLTL----KIRIKTREKELTFDRKNIAKARLAI 155


>gi|323489586|ref|ZP_08094813.1| hypothetical protein GPDM_09575 [Planococcus donghaensis MPA1U2]
 gi|323396717|gb|EGA89536.1| hypothetical protein GPDM_09575 [Planococcus donghaensis MPA1U2]
          Length = 161

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 5/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I  + QP+  E+    V +  L+E ++  L+++V+  +  + +  C  +S+ +S I
Sbjct: 4   ITEQIEQIAQPITSELGLELVDVEFLKEGRDWFLRVYVDNPEAPIDIEQCALVSEKLSGI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + IE +Y LEVSSPG +RP+ ++ DF +  G  +  +      D ++  G +    
Sbjct: 64  LDELDPIEQNYFLEVSSPGAERPLKKEKDFEKAIGKFIYIKTYEPVEDAKEFEGYLKSYD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +E + +  + +    I+I+ + +   RL +
Sbjct: 124 DEQVEIEIKIKTRRKI----ISIAKNKIAVIRLAI 154


>gi|226323232|ref|ZP_03798750.1| hypothetical protein COPCOM_01004 [Coprococcus comes ATCC 27758]
 gi|225208422|gb|EEG90776.1| hypothetical protein COPCOM_01004 [Coprococcus comes ATCC 27758]
          Length = 155

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++E+  F    +  ++E  N  L+ ++++  G + + DCE +S+ +S IL
Sbjct: 8   EQKTEEILNPIVEKHGFDLWDVEYVKEGGNWYLRAYIDKP-GGIMVDDCEVVSRELSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I+  Y LEVSSPG+ RP+ ++ DF R  G  V      +   +++ IG +    +
Sbjct: 67  DEKDFIDEAYILEVSSPGLGRPLKKEKDFARSLGEEVEVRTYRAIDRQKEFIGILKDYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E       ++  IA+
Sbjct: 127 DTVTIEYEDGETMTFDKADIAL 148


>gi|126664887|ref|ZP_01735871.1| hypothetical protein MELB17_03575 [Marinobacter sp. ELB17]
 gi|126631213|gb|EBA01827.1| hypothetical protein MELB17_03575 [Marinobacter sp. ELB17]
          Length = 153

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 9/153 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  +++PV+E + +    I      +  LL++F++  +  + + DCE++S+ +S ++
Sbjct: 5   IKQLEDILRPVVEGLGYEYWGIEFRARGHESLLRLFIDDVEKGIGIEDCEKVSRQVSSVM 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I+  Y LEVSSPG+DRP+   + +  + GH V   + ++   ++K  G + G   
Sbjct: 65  DVEDPIQSEYTLEVSSPGMDRPLFELAQYQAFVGHKVQIRLRMAFEGRRKFQGLLNGIEG 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                         +++ +  + FDS+  A ++
Sbjct: 125 --------DDVIVVVDDHEFLLPFDSIDKANIV 149


>gi|307293341|ref|ZP_07573187.1| protein of unknown function DUF150 [Sphingobium chlorophenolicum
           L-1]
 gi|306881407|gb|EFN12623.1| protein of unknown function DUF150 [Sphingobium chlorophenolicum
           L-1]
          Length = 174

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 9/174 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAI 76
           M    +++++I+P ++ + F  V+I L    +   LQI  ER +   + + DC  +S+ +
Sbjct: 1   MADIAELTALIEPEVKALGFDLVRIKLFGSGDEYTLQIMAERPETKQLVIEDCATISRRL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +LD  + IE  YRLEVSSPGIDRP+ R +DFL W GH        +   ++   G + 
Sbjct: 61  SDVLDEADPIEEAYRLEVSSPGIDRPLTRLTDFLEWTGHEAKIAATETVSGRKSFRGVLN 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           G           K G        +AI F  +  A+LI+TD L+ AS+      A
Sbjct: 121 GIEGEDILFTDAKAG-------DVAIPFALVGDAKLILTDALIAASMPLSSDGA 167


>gi|78358200|ref|YP_389649.1| hypothetical protein Dde_3160 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|91208345|sp|Q30WJ2|RIMP_DESDG RecName: Full=Ribosome maturation factor rimP
 gi|78220605|gb|ABB39954.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 173

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 4/158 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
             +   +  +I PVI         +  ++    +L+I+++  DG +T+  C  +S+ I  
Sbjct: 6   TTIHEQLLEIITPVIRSFDLELWGMDFIQGGKAVLRIYIDGPDG-VTIDQCATVSRHIGL 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS---SGDKQKLIGKI 135
            L+VE+II G Y LEVSSPG++RP+   +    + GH     +         ++K  G +
Sbjct: 65  ALEVEDIIAGAYNLEVSSPGLERPLFSAAQLAAYKGHKAELVLRAPCAQFPGRKKFTGVV 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  F L+ +     D  + +++  +D +  ARLI
Sbjct: 125 GNVEGENFTLQIDPLKGGDNLQEELSAHWDDVKKARLI 162


>gi|114562166|ref|YP_749679.1| hypothetical protein Sfri_0988 [Shewanella frigidimarina NCIMB 400]
 gi|114333459|gb|ABI70841.1| protein of unknown function DUF150 [Shewanella frigidimarina NCIMB
           400]
          Length = 165

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++   +E + F+   I  ++  ++ +L++F++ ++G + + DC E S+ +S +
Sbjct: 18  IESKLVEMLTVPVEALGFKLWGIEYIQAGRHSILRVFIDHENG-INIEDCAEASRQVSAV 76

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+     +  + G     ++ +     + L G I    
Sbjct: 77  MDVEDPISTEYTLEVSSPGVDRPLFTAEQYRAYIGEETKVQLTMPVAGSRNLKGVISSVD 136

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +  + +         + ++ D++    +I
Sbjct: 137 GQMLTITVDGK--------DLIVALDNIRKGNVI 162


>gi|163782300|ref|ZP_02177298.1| hypothetical protein HG1285_05920 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882333|gb|EDP75839.1| hypothetical protein HG1285_05920 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 157

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 7/152 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           ++  I  +++P+I+ M +R   +    E+  +L++ +++  G +T+RDCEE+S+ IS +L
Sbjct: 8   ISRRIKELVEPLIKGMGYRLFDVEFKPERGWVLRVIIDKP-GGVTIRDCEEVSKKISGLL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+II   Y LE+SSPG+ R + +   +  + G +V   +      K++  G +    E
Sbjct: 67  DVEDIIPFSYMLEISSPGLTRELEKPEHYDFFKGRLVKVVLREPVSGKREATGYVESVRE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L + ++GE       + I F ++   RL
Sbjct: 127 GIITLREREKGEA------LHIPFSAIAKGRL 152


>gi|240128558|ref|ZP_04741219.1| hypothetical protein NgonS_08003 [Neisseria gonorrhoeae SK-93-1035]
 gi|317164605|gb|ADV08146.1| hypothetical protein NGTW08_1178 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 143

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G      
Sbjct: 59  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|323340012|ref|ZP_08080278.1| protein of hypothetical function DUF150 [Lactobacillus ruminis ATCC
           25644]
 gi|323092518|gb|EFZ35124.1| protein of hypothetical function DUF150 [Lactobacillus ruminis ATCC
           25644]
          Length = 157

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ P+++E  F  V    ++E K+  L+I++++  G + + +C  +S  +  
Sbjct: 3   SVVETVTELVTPILDERHFELVDAEFVKEGKSWYLRIYIDKP-GGINIEECALVSDLLGE 61

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ ++ D+ R   + +   +       +   G ++
Sbjct: 62  KLDNCDPDPIPQAYFLEVSSPGAERPLKKERDYERALNYYIHVSLYQPLEGNKVYEGTMV 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   LE   +  +      I I    +  ARL +
Sbjct: 122 DLKPDELTLEYMDKTRQK----TIVIPRKQIAQARLAI 155


>gi|157376523|ref|YP_001475123.1| hypothetical protein Ssed_3391 [Shewanella sediminis HAW-EB3]
 gi|157318897|gb|ABV37995.1| protein of unknown function DUF150 [Shewanella sediminis HAW-EB3]
          Length = 172

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 10/161 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEEL 72
           R      +   +  +++  +E +      +  ++  K+ +L+++++ + G + + DC E 
Sbjct: 18  RGVTLATIENRLEEMLKSPVEALGHTLWGLEYVQAGKHSILRVYIDNEKG-IFIEDCAET 76

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S +LDVE+ I   Y LEVSSPG+DRP+ +   +  +    V  ++ +     + L 
Sbjct: 77  SRQVSAVLDVEDPISTEYTLEVSSPGVDRPLFKAEQYAAYIDETVKIQLTMPVAGSRNLK 136

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G I G       L  +          ++ I+ D++    LI
Sbjct: 137 GTITGIEGQMLSLTVDGN--------ELIIALDNIRKGNLI 169


>gi|289646959|ref|ZP_06478302.1| hypothetical protein Psyrpa2_04287 [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 152

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  V+ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LD
Sbjct: 6   EQLQDVLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I T
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPT 150


>gi|222151099|ref|YP_002560253.1| hypothetical protein MCCL_0850 [Macrococcus caseolyticus JCSC5402]
 gi|254806624|sp|B9EBE6|RIMP_MACCJ RecName: Full=Ribosome maturation factor rimP
 gi|222120222|dbj|BAH17557.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 155

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++ QPV+E + F  V +  ++E  +  L+I +++  G + + DC   S+ IS +
Sbjct: 4   VTERVEAICQPVVESLGFELVDVEYVKEGPDYYLRIAIDKP-GGIDISDCALASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D E+ I   Y L+VSSPG +RP+ ++ D+    G  V  ++       ++ IG++   S
Sbjct: 63  MDKEDPITEAYFLDVSSPGAERPLKKEKDYENAIGKHVYVKLYEPVEGDKEWIGELKEVS 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    L  + +    +    I I    +   RL V
Sbjct: 123 KDTITLSAKIKTRTKV----IEIDRKRIAKIRLAV 153


>gi|330877235|gb|EGH11384.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 152

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LD
Sbjct: 6   EQLQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVRIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I T
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDLIDKANIIPT 150


>gi|254419012|ref|ZP_05032736.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
 gi|196185189|gb|EDX80165.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
          Length = 199

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 8/169 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD-DGNMTLRDCEELSQAISPILD 81
            +  +I P+ E +    V++ L+   K   LQI  ER  D ++++  C +LS+A+S + D
Sbjct: 10  QLLELIDPIAESLGLEVVRVRLMTGSKRQRLQIMAERPSDHDISVEQCAKLSRAVSEVFD 69

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I G Y LEVSSPGIDRP+ R  DF  + G     E       +++  G + G  + 
Sbjct: 70  AADPIAGEYMLEVSSPGIDRPLTRPLDFDLFEGEEARLETDRMIEGRKRFKGVLAGYEDG 129

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
              ++ +   E  +      I FD L  A+L++TD L++       +  
Sbjct: 130 NVLIDLDGEDETAL------IPFDWLSDAKLVLTDALMKRGAAIRAARG 172


>gi|21243418|ref|NP_643000.1| hypothetical protein XAC2689 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|34223124|sp|Q8PJ53|RIMP_XANAC RecName: Full=Ribosome maturation factor rimP
 gi|21108969|gb|AAM37536.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 196

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 12/158 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +          +       ++   + I +D++  AR++
Sbjct: 125 LRID------AEAAAVVFAVDGKDVQIGYDNIDKARIV 156


>gi|312796185|ref|YP_004029107.1| hypothetical protein RBRH_03643 [Burkholderia rhizoxinica HKI 454]
 gi|312167960|emb|CBW74963.1| Hypothetical cytosolic protein [Burkholderia rhizoxinica HKI 454]
          Length = 216

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 9/150 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +S +I+  +  + +  V +        +L++F+++  G + + DCE++++ +  +L VE
Sbjct: 66  QLSELIENTVTGLGYELVDLE--RSGRGMLRVFIDQPAG-IAIDDCEKVTRQLQHVLTVE 122

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ +++DF R+ G  V   +    G ++   G +   +    
Sbjct: 123 NI--DYERLEVSSPGLDRPLKKRADFERFAGSEVMVTLKQPLGGRKSFRGILHAPNGDTI 180

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E +        ++  +   +  ARL+
Sbjct: 181 GLEFEGKD----GPARLDFTLADMDRARLV 206


>gi|119470820|ref|ZP_01613431.1| hypothetical protein ATW7_05756 [Alteromonadales bacterium TW-7]
 gi|119446047|gb|EAW27326.1| hypothetical protein ATW7_05756 [Alteromonadales bacterium TW-7]
          Length = 151

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L  D+ +++ P +E + F    +  ++  ++  L++++  +DG +++ +C + S+ IS
Sbjct: 2   TKLEQDLVTMLTPAVEMLGFELHGLEFVQAGRHSTLRVYIAHEDG-ISVDNCADASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I   Y LEVSSPG+DRP+ ++  + +  G  V     L    ++   G ++ 
Sbjct: 61  AILDVEDPITNEYDLEVSSPGVDRPLFKQDHYEQAQGEEVRVRTKLPQDGRRNFKGDLIA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            S     L  +         ++  I   ++  A LI
Sbjct: 121 VSSDMITLSSDG--------VEHLIMLSNIERANLI 148


>gi|261364308|ref|ZP_05977191.1| hypothetical protein NEIMUCOT_04406 [Neisseria mucosa ATCC 25996]
 gi|288567561|gb|EFC89121.1| hypothetical protein NEIMUCOT_04406 [Neisseria mucosa ATCC 25996]
          Length = 143

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPVDGQKNFIGRIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L  + +           I  D++  ARL
Sbjct: 117 TLSFDGK--------TAQIGLDNIDKARL 137


>gi|145638848|ref|ZP_01794456.1| hypothetical protein CGSHiII_01640 [Haemophilus influenzae PittII]
 gi|145271820|gb|EDK11729.1| hypothetical protein CGSHiII_01640 [Haemophilus influenzae PittII]
 gi|309750829|gb|ADO80813.1| 30S ribosomal maturation protein RimP [Haemophilus influenzae
           R2866]
          Length = 151

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F++++ G +T+ +C ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDKE-GGVTVDNCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +         + F ++  A ++
Sbjct: 123 KDMITLIVDDQEQI--------LVFGNIQKANVV 148


>gi|315165483|gb|EFU09500.1| UPF0090 family protein [Enterococcus faecalis TX1302]
          Length = 185

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 82/156 (52%), Gaps = 8/156 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ ++ P++EE +F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  L
Sbjct: 33  VETVTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEKLSEKL 91

Query: 81  DV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           D    + I   Y LEVSSPG +RP+ ++SD+ +  G  +   +  +   ++++ G ++  
Sbjct: 92  DAMDPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQIEGTLVHL 151

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 L  + +   +    ++     ++  ARL +
Sbjct: 152 DSEQLTLSVKIKTRVN----EMTFERKNIAKARLAI 183


>gi|221232983|ref|YP_002515419.1| hypothetical protein CCNA_00044 [Caulobacter crescentus NA1000]
 gi|259585738|sp|B8GX01|RIMP_CAUCN RecName: Full=Ribosome maturation factor rimP
 gi|220962155|gb|ACL93511.1| hypothetical cytosolic protein [Caulobacter crescentus NA1000]
          Length = 191

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 12/182 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD------DGNMTLR 67
           + G      D+  ++ PV E + +  V++ L+   +   LQI  E         G+M + 
Sbjct: 1   MRGKTQEDRDLIEMLDPVAESLGYEIVRLRLMGGTEQRRLQIMAEHPLLEDGSGGDMNVE 60

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DC +LS+A+S +LD  + I G Y LEVSSPGIDRP+ R  DF  + G     E+   +  
Sbjct: 61  DCAKLSRAVSEVLDAADPIAGEYTLEVSSPGIDRPLTRLKDFDDYAGLEARIELDRVAEG 120

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G++ G  +    L  E       +++ +   F  ++ A+L++TD L+        
Sbjct: 121 RKRFKGELAGVEDDQVGLNIEGE-----DDVTVYFPFAWVIDAKLVMTDALMERGAKQRA 175

Query: 188 SY 189
           + 
Sbjct: 176 AR 177


>gi|160940463|ref|ZP_02087808.1| hypothetical protein CLOBOL_05353 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437043|gb|EDP14810.1| hypothetical protein CLOBOL_05353 [Clostridium bolteae ATCC
           BAA-613]
          Length = 155

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +   + P++EE  F  V +  ++E     L+ +++++ G + + DCE +S+A+S  L
Sbjct: 8   ESRVEKHLLPLMEEHGFELVDVEYVKEAGTWYLRAYIDKE-GGIAVDDCEVISRALSDWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G +    E
Sbjct: 67  DKEDFIDDSYILEVSSPGLGRPLKKERDFVRSMGKDVDVRLYRQLNKQKEFTGALSAYDE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               L  E   +    +  IA+
Sbjct: 127 NTVTLTMEDGSQMVFEKADIAL 148


>gi|239999348|ref|ZP_04719272.1| hypothetical protein Ngon3_07677 [Neisseria gonorrhoeae 35/02]
 gi|240014532|ref|ZP_04721445.1| hypothetical protein NgonD_07784 [Neisseria gonorrhoeae DGI18]
 gi|240016978|ref|ZP_04723518.1| hypothetical protein NgonFA_07392 [Neisseria gonorrhoeae FA6140]
 gi|240081420|ref|ZP_04725963.1| hypothetical protein NgonF_08941 [Neisseria gonorrhoeae FA19]
 gi|240113615|ref|ZP_04728105.1| hypothetical protein NgonM_08610 [Neisseria gonorrhoeae MS11]
 gi|240118337|ref|ZP_04732399.1| hypothetical protein NgonPID_07718 [Neisseria gonorrhoeae PID1]
 gi|240121054|ref|ZP_04734016.1| hypothetical protein NgonPI_04654 [Neisseria gonorrhoeae PID24-1]
 gi|240123885|ref|ZP_04736841.1| hypothetical protein NgonP_08079 [Neisseria gonorrhoeae PID332]
 gi|240126084|ref|ZP_04738970.1| hypothetical protein NgonSK_07689 [Neisseria gonorrhoeae SK-92-679]
          Length = 143

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELAAQG--TLRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G      
Sbjct: 59  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|253580824|ref|ZP_04858087.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847894|gb|EES75861.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 154

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 6/148 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++E   F  V +  ++E  N  L+ ++++  G +T+ DCE +S+A S  L
Sbjct: 8   EKRAEELLAPIVELNGFELVDVEYVKEAGNWYLRGYIDKP-GGITVNDCETVSRAFSDKL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  + IE  Y +E+SSPG+DRP+ +  DF R  G +V          +++  G +     
Sbjct: 67  DENDFIEDSYIMEISSPGLDRPLKKDKDFERNMGKLVEIRTYRPIEKQKEFCGILTAYDS 126

Query: 141 TGFFLEKEKR----GEKDMNELQIAISF 164
               ++++       +KD   +++AI F
Sbjct: 127 NSVTIDEDGTERVFDKKDTALIRLAIEF 154


>gi|77919152|ref|YP_356967.1| hypothetical protein Pcar_1552 [Pelobacter carbinolicus DSM 2380]
 gi|91208010|sp|Q3A4B0|RIMP_PELCD RecName: Full=Ribosome maturation factor rimP
 gi|77545235|gb|ABA88797.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 162

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 13/164 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQ 74
                +   I S++ PV+EE     V +    E    +L++++++  G +TL  C E+S+
Sbjct: 1   MTQQTVLDKIRSLVLPVLEEKGRELVDVEYRREGQGWILRLYIDQP-GGVTLDACAEVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------DK 128
            +  +L+VE+ I+  Y LEVSSPG+DRP+ +  D+ R+ G +   +  +S         +
Sbjct: 60  EVGVLLEVEDPIDTAYNLEVSSPGLDRPLTKLEDYERFAGRLAKVKSRVSIDVDGKGRGR 119

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +  +G + G SE    LE + +     N  ++ I F+ +  A L
Sbjct: 120 KTFVGVLAGLSEGKVVLELKDK-----NGFRMEIPFEDIEKANL 158


>gi|78048395|ref|YP_364570.1| hypothetical protein XCV2839 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325924689|ref|ZP_08186127.1| hypothetical protein XPE_0035 [Xanthomonas perforans 91-118]
 gi|91208411|sp|Q3BRP3|RIMP_XANC5 RecName: Full=Ribosome maturation factor rimP
 gi|78036825|emb|CAJ24518.1| YhbC family protein [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|325544895|gb|EGD16240.1| hypothetical protein XPE_0035 [Xanthomonas perforans 91-118]
          Length = 196

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 12/158 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +            +     ++   + I +D++  AR++
Sbjct: 125 LRIDAEA------EAVVFAVDGKDVQIGYDNIDKARIV 156


>gi|261856065|ref|YP_003263348.1| hypothetical protein Hneap_1469 [Halothiobacillus neapolitanus c2]
 gi|261836534|gb|ACX96301.1| protein of unknown function DUF150 [Halothiobacillus neapolitanus
           c2]
          Length = 166

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 7/153 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   I +++QPV+E      V        + LL+++++ + G +TL DC ++S A+S +L
Sbjct: 4   IPESIEALLQPVVEAAGCAWVGGEFRGGPDGLLRVYIDTEAG-VTLDDCTKVSDALSGVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+   G YRLEVSSPG++RPM R SDF  + G  V   +      +++  G +     
Sbjct: 63  DVEDPFPGFYRLEVSSPGVERPMFRASDFALFIGQKVHVRLHRPLAQRRRFEGIVSAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               L  E       ++      F  +  A L+
Sbjct: 123 EQISLSIEG------DQDVFTFPFSEVERANLV 149


>gi|325915553|ref|ZP_08177864.1| hypothetical protein XVE_1758 [Xanthomonas vesicatoria ATCC 35937]
 gi|325538269|gb|EGD09954.1| hypothetical protein XVE_1758 [Xanthomonas vesicatoria ATCC 35937]
          Length = 196

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 12/157 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHAGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + T                ++   + I FD++  AR+
Sbjct: 125 LRTETEA------DAVVFSVDGKDVQIGFDNIDKARI 155


>gi|308389760|gb|ADO32080.1| hypothetical protein NMBB_1873 [Neisseria meningitidis alpha710]
 gi|325134693|gb|EGC57332.1| hypothetical protein NMBM13399_0599 [Neisseria meningitidis M13399]
 gi|325198740|gb|ADY94196.1| conserved hypothetical protein [Neisseria meningitidis G2136]
          Length = 143

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TISFDGK--------TVQIELGNIDKARL 137


>gi|15677490|ref|NP_274646.1| hypothetical protein NMB1641 [Neisseria meningitidis MC58]
 gi|218768663|ref|YP_002343175.1| hypothetical protein NMA1895 [Neisseria meningitidis Z2491]
 gi|304386890|ref|ZP_07369152.1| protein of hypothetical function DUF150 [Neisseria meningitidis
           ATCC 13091]
 gi|54040272|sp|P67217|RIMP_NEIMB RecName: Full=Ribosome maturation factor rimP
 gi|54042665|sp|P67216|RIMP_NEIMA RecName: Full=Ribosome maturation factor rimP
 gi|7226891|gb|AAF41990.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|121052671|emb|CAM09012.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
 gi|304339049|gb|EFM05141.1| protein of hypothetical function DUF150 [Neisseria meningitidis
           ATCC 13091]
          Length = 149

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 13/153 (8%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G + DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +
Sbjct: 4   GSSMDIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKESG-ITVEDCATVSNHLSRV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             VE+I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G  
Sbjct: 61  FMVEDI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCE 118

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +  + +         + I   ++  ARL
Sbjct: 119 NDTVTVSFDGK--------TVQIELGNIDKARL 143


>gi|167037625|ref|YP_001665203.1| hypothetical protein Teth39_1213 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|307264911|ref|ZP_07546473.1| protein of unknown function DUF150 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|320116040|ref|YP_004186199.1| hypothetical protein Thebr_1242 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|326389439|ref|ZP_08211006.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|226696278|sp|B0K9Q4|RIMP_THEP3 RecName: Full=Ribosome maturation factor rimP
 gi|166856459|gb|ABY94867.1| protein of unknown function DUF150 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|306920169|gb|EFN50381.1| protein of unknown function DUF150 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|319929131|gb|ADV79816.1| protein of unknown function DUF150 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325994444|gb|EGD52869.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 151

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 83/152 (54%), Gaps = 7/152 (4%)

Query: 19  MGLAGDIS-SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           M     I+  ++ PV+E+ +F  V +   +E  +  L+++++++ G +TL DC+ +S+ +
Sbjct: 1   MSKIEQIAKDLVMPVLEKNNFELVDVEYKKEGSHWYLRVYIDKE-GGITLDDCQLVSEYL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++
Sbjct: 60  SDRLDEVDPIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYAPIDKRKKFEGELI 119

Query: 137 GTSETGFFL----EKEKRGEKDMNELQIAISF 164
             +     +    E+++   K+++ ++  I F
Sbjct: 120 EFTGDKIIILYNGERKEFDMKNVSLVKPVIKF 151


>gi|300854497|ref|YP_003779481.1| hypothetical protein CLJU_c13110 [Clostridium ljungdahlii DSM
           13528]
 gi|300434612|gb|ADK14379.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 154

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 84/151 (55%), Gaps = 9/151 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +S++IQP++  +++    +   +E N   L+I++++ +GN++L DCE +S+A+S +LD
Sbjct: 8   ERMSALIQPIVNNLNYELYYLEFKKEGNNNYLRIYIDKKEGNISLEDCESVSRAVSDMLD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            E+ I+  Y LEVSSPG++R +  +    R+ G+ V   I      K+K  G+++  +  
Sbjct: 68  KEDPIKDPYYLEVSSPGVERKLYTEEHLKRYIGYSVQVNISGLLKGKKKYEGELLDFNSN 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              ++ E        E  IAI  D +L+  L
Sbjct: 128 ELKIKCE--------EEDIAIPRDKILNVNL 150


>gi|325921397|ref|ZP_08183254.1| hypothetical protein XGA_2246 [Xanthomonas gardneri ATCC 19865]
 gi|325548155|gb|EGD19152.1| hypothetical protein XGA_2246 [Xanthomonas gardneri ATCC 19865]
          Length = 196

 Score =  164 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  GKI
Sbjct: 65  VSAQLDVEDPITGNYTLEVSSPGVDRPLFTLEQFARHVGESAKIVLKLAQDGRRRFQGKI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +                  ++   + I FD++  AR+
Sbjct: 125 LRIEAEA------DAVVFAIDGKDVQIGFDNIDKARI 155


>gi|227518529|ref|ZP_03948578.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX0104]
 gi|227553055|ref|ZP_03983104.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           HH22]
 gi|229546054|ref|ZP_04434779.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX1322]
 gi|229550244|ref|ZP_04438969.1| protein of hypothetical function DUF150 [Enterococcus faecalis ATCC
           29200]
 gi|293383161|ref|ZP_06629078.1| UPF0090 protein [Enterococcus faecalis R712]
 gi|293387685|ref|ZP_06632230.1| UPF0090 protein [Enterococcus faecalis S613]
 gi|307268538|ref|ZP_07549911.1| UPF0090 family protein [Enterococcus faecalis TX4248]
 gi|307273443|ref|ZP_07554688.1| UPF0090 family protein [Enterococcus faecalis TX0855]
 gi|307277606|ref|ZP_07558698.1| UPF0090 family protein [Enterococcus faecalis TX2134]
 gi|307279084|ref|ZP_07560142.1| UPF0090 family protein [Enterococcus faecalis TX0860]
 gi|307288431|ref|ZP_07568419.1| UPF0090 family protein [Enterococcus faecalis TX0109]
 gi|307291250|ref|ZP_07571134.1| UPF0090 family protein [Enterococcus faecalis TX0411]
 gi|312899342|ref|ZP_07758675.1| UPF0090 family protein [Enterococcus faecalis TX0470]
 gi|312904019|ref|ZP_07763187.1| UPF0090 family protein [Enterococcus faecalis TX0635]
 gi|312907250|ref|ZP_07766241.1| UPF0090 family protein [Enterococcus faecalis DAPTO 512]
 gi|312909868|ref|ZP_07768716.1| SP14.3 family protein [Enterococcus faecalis DAPTO 516]
 gi|312952266|ref|ZP_07771141.1| UPF0090 family protein [Enterococcus faecalis TX0102]
 gi|227074011|gb|EEI11974.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX0104]
 gi|227177798|gb|EEI58770.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           HH22]
 gi|229304682|gb|EEN70678.1| protein of hypothetical function DUF150 [Enterococcus faecalis ATCC
           29200]
 gi|229308827|gb|EEN74814.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX1322]
 gi|291079500|gb|EFE16864.1| UPF0090 protein [Enterococcus faecalis R712]
 gi|291082874|gb|EFE19837.1| UPF0090 protein [Enterococcus faecalis S613]
 gi|306497481|gb|EFM67014.1| UPF0090 family protein [Enterococcus faecalis TX0411]
 gi|306500602|gb|EFM69931.1| UPF0090 family protein [Enterococcus faecalis TX0109]
 gi|306504209|gb|EFM73421.1| UPF0090 family protein [Enterococcus faecalis TX0860]
 gi|306505871|gb|EFM75049.1| UPF0090 family protein [Enterococcus faecalis TX2134]
 gi|306509970|gb|EFM78995.1| UPF0090 family protein [Enterococcus faecalis TX0855]
 gi|306515134|gb|EFM83676.1| UPF0090 family protein [Enterococcus faecalis TX4248]
 gi|310626278|gb|EFQ09561.1| UPF0090 family protein [Enterococcus faecalis DAPTO 512]
 gi|310629650|gb|EFQ12933.1| UPF0090 family protein [Enterococcus faecalis TX0102]
 gi|310632495|gb|EFQ15778.1| UPF0090 family protein [Enterococcus faecalis TX0635]
 gi|311289826|gb|EFQ68382.1| SP14.3 family protein [Enterococcus faecalis DAPTO 516]
 gi|311293493|gb|EFQ72049.1| UPF0090 family protein [Enterococcus faecalis TX0470]
 gi|315027495|gb|EFT39427.1| UPF0090 family protein [Enterococcus faecalis TX2137]
 gi|315030926|gb|EFT42858.1| UPF0090 family protein [Enterococcus faecalis TX4000]
 gi|315034082|gb|EFT46014.1| UPF0090 family protein [Enterococcus faecalis TX0017]
 gi|315036750|gb|EFT48682.1| UPF0090 family protein [Enterococcus faecalis TX0027]
 gi|315145576|gb|EFT89592.1| UPF0090 family protein [Enterococcus faecalis TX2141]
 gi|315147749|gb|EFT91765.1| UPF0090 family protein [Enterococcus faecalis TX4244]
 gi|315151450|gb|EFT95466.1| UPF0090 family protein [Enterococcus faecalis TX0012]
 gi|315153229|gb|EFT97245.1| UPF0090 family protein [Enterococcus faecalis TX0031]
 gi|315155992|gb|EFU00009.1| UPF0090 family protein [Enterococcus faecalis TX0043]
 gi|315157836|gb|EFU01853.1| UPF0090 family protein [Enterococcus faecalis TX0312]
 gi|315160338|gb|EFU04355.1| UPF0090 family protein [Enterococcus faecalis TX0645]
 gi|315166761|gb|EFU10778.1| UPF0090 family protein [Enterococcus faecalis TX1341]
 gi|315169948|gb|EFU13965.1| UPF0090 family protein [Enterococcus faecalis TX1342]
 gi|315174356|gb|EFU18373.1| UPF0090 family protein [Enterococcus faecalis TX1346]
 gi|315575676|gb|EFU87867.1| UPF0090 family protein [Enterococcus faecalis TX0309B]
 gi|315578366|gb|EFU90557.1| UPF0090 family protein [Enterococcus faecalis TX0630]
 gi|315579880|gb|EFU92071.1| UPF0090 family protein [Enterococcus faecalis TX0309A]
 gi|327534891|gb|AEA93725.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           OG1RF]
 gi|329577095|gb|EGG58568.1| hypothetical protein HMPREF9520_01115 [Enterococcus faecalis
           TX1467]
          Length = 185

 Score =  164 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 81/156 (51%), Gaps = 8/156 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ ++ P++EE +F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  L
Sbjct: 33  VETVTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEKLSEKL 91

Query: 81  DV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           D    + I   Y LEVSSPG +RP+ ++SD+ +  G  +   +  +   ++++ G ++  
Sbjct: 92  DAMDPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQIEGTLVHL 151

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 L  + +        ++     ++  ARL +
Sbjct: 152 DSEQLTLSVKIKTRVK----EMTFERKNIAKARLAI 183


>gi|329896245|ref|ZP_08271423.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC3088]
 gi|328921916|gb|EGG29283.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC3088]
          Length = 155

 Score =  164 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 79/152 (51%), Gaps = 10/152 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
             +++ +++  +E M F    +    + KN LL+++++R+ G + + DC ++S+ IS IL
Sbjct: 9   EAELADLLRATVEAMGFALWGLEFRAQGKNSLLRVYIDREAG-VQVDDCAQVSRQISGIL 67

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I G Y LEVSSPGIDR +       ++ G  +  ++ +    ++   G ++G  +
Sbjct: 68  DVEDPIAGEYNLEVSSPGIDRLLFSLEQCQQYVGEWLEVKLRVPFEGRKNFNGTLVGIED 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +  +          +  + FDS+  A++
Sbjct: 128 QDVVVRIDDD--------EYVLPFDSIDKAKV 151


>gi|256750787|ref|ZP_05491672.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256750370|gb|EEU63389.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 151

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 83/152 (54%), Gaps = 7/152 (4%)

Query: 19  MGLAGDIS-SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           M     I+  ++ P++E+ +F  V +   +E  +  L+++++++ G +TL DC+ +S+ +
Sbjct: 1   MSKIEQIAKDLVMPILEKNNFELVDVEYKKEGSHWYLRVYIDKE-GGITLDDCQLVSEYL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++
Sbjct: 60  SDRLDEVDPIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYSPIDKRKKFEGELI 119

Query: 137 GTSETGFFL----EKEKRGEKDMNELQIAISF 164
             +     +    E+++   K+++ ++  I F
Sbjct: 120 EFTGDKIIILYNGERKEFDMKNVSLVKPVIKF 151


>gi|91205426|ref|YP_537781.1| hypothetical protein RBE_0611 [Rickettsia bellii RML369-C]
 gi|157827029|ref|YP_001496093.1| hypothetical protein A1I_03485 [Rickettsia bellii OSU 85-389]
 gi|91068970|gb|ABE04692.1| unknown [Rickettsia bellii RML369-C]
 gi|157802333|gb|ABV79056.1| hypothetical protein A1I_03485 [Rickettsia bellii OSU 85-389]
          Length = 180

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 92/164 (56%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           +   I+ +IQ  + +M F  V + +    + +++I ++R DD  +T+ DC + S  IS I
Sbjct: 16  IEQQITDLIQETLSDMGFELVLVRVKGLSSKVVEILIDRLDDQKVTIEDCTKASNTISAI 75

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS G++RP+V+  ++ R+ G  V  ++      + +  G I+   
Sbjct: 76  LDVEDLIEEAYYLEVSSSGVERPLVKFENYKRFIGREVKIKLKELLNGRSRYQGTIIEAK 135

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +   +L+ E +        ++ I++D + SA L++T+E+ +  L
Sbjct: 136 DDKVYLKWEDQ--------EVIINYDLIKSANLVLTEEMFKKLL 171


>gi|167040286|ref|YP_001663271.1| hypothetical protein Teth514_1649 [Thermoanaerobacter sp. X514]
 gi|300914370|ref|ZP_07131686.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X561]
 gi|307724394|ref|YP_003904145.1| hypothetical protein Thet_1251 [Thermoanaerobacter sp. X513]
 gi|226736395|sp|B0K1E0|RIMP_THEPX RecName: Full=Ribosome maturation factor rimP
 gi|166854526|gb|ABY92935.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X514]
 gi|300889305|gb|EFK84451.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X561]
 gi|307581455|gb|ADN54854.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X513]
          Length = 151

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 83/152 (54%), Gaps = 7/152 (4%)

Query: 19  MGLAGDIS-SVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           M     I+  ++ P++E+ +F  V +   +E  +  L+++++++ G +TL DC+ +S+ +
Sbjct: 1   MSKIEQIAKDLVMPILEKNNFELVDVEYKKEGSHWYLRVYIDKE-GGITLDDCQLVSEYL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++
Sbjct: 60  SDRLDEVDPIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYTPIDKRKKFEGELI 119

Query: 137 GTSETGFFL----EKEKRGEKDMNELQIAISF 164
             +     +    E+++   K+++ ++  I F
Sbjct: 120 EFTGDKIIILYNGERKEFDMKNVSLVKPVIKF 151


>gi|195953995|ref|YP_002122285.1| protein of unknown function DUF150 [Hydrogenobaculum sp. Y04AAS1]
 gi|226736378|sp|B4U6H1|RIMP_HYDS0 RecName: Full=Ribosome maturation factor rimP
 gi|195933607|gb|ACG58307.1| protein of unknown function DUF150 [Hydrogenobaculum sp. Y04AAS1]
          Length = 154

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 9/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +A  +  +++P+ + + FR   +    E   +L+I ++++ G +T+ DCEELS+ +S +L
Sbjct: 7   IATTVKDLVKPISDNLGFRLFDVEFKPENGWVLRIIIDKE-GGVTIDDCEELSKRVSALL 65

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE++I   Y LEVSSPG+ R +  K  +  + G      +     +KQ+  G I    +
Sbjct: 66  DVEDVITSSYFLEVSSPGLTRELKEKWHYEFFKGKYARLYLKEKIDNKQEYAGYIDSVED 125

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L    +         + I FD +  ARL
Sbjct: 126 DTLVLRLLDK--------TLKIPFDKIAKARL 149


>gi|28871626|ref|NP_794245.1| hypothetical protein PSPTO_4492 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213966649|ref|ZP_03394800.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301383159|ref|ZP_07231577.1| hypothetical protein PsyrptM_11007 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063406|ref|ZP_07254947.1| hypothetical protein PsyrptK_25769 [Pseudomonas syringae pv. tomato
           K40]
 gi|302133779|ref|ZP_07259769.1| hypothetical protein PsyrptN_20414 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|34222830|sp|Q87WQ3|RIMP_PSESM RecName: Full=Ribosome maturation factor rimP
 gi|28854878|gb|AAO57940.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213928499|gb|EEB62043.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 158

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LD
Sbjct: 12  EQLQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 71  VEDPISTEYTLEVSSPGMERPLFTIEQFALYAGEQVRIKLRSPFEGRRNFQGLLRGV--- 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I T
Sbjct: 128 -----EEQDVVVQVEDHEFLLPIDLIDKANIIPT 156


>gi|94497166|ref|ZP_01303738.1| hypothetical protein SKA58_13228 [Sphingomonas sp. SKA58]
 gi|94423271|gb|EAT08300.1| hypothetical protein SKA58_13228 [Sphingomonas sp. SKA58]
          Length = 196

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 12/186 (6%)

Query: 10  KYEPRIFGD---MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD-DGNM 64
             E R+      M     ++++I+P ++ + F  V+I L    +   LQI  E      +
Sbjct: 11  DAEARMIVSGDCMADIAALTALIEPEVQALGFDLVRIKLFGSGDDYTLQIMAENPRTKQL 70

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            + DC  +S+ +S +LD  + IE  YRLEVSSPGIDRP+ R  DF  W GH         
Sbjct: 71  VIEDCATISRRLSDVLDEADPIEEAYRLEVSSPGIDRPLTRLHDFQEWAGHEAKIGASEI 130

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
              ++   G + G           K G        + I F  +  A+L++TD L+ AS+ 
Sbjct: 131 VSGRKSFRGVVNGVDGEEILFTDAKSG-------DVRIPFALVDEAKLLLTDALIAASMP 183

Query: 185 NYGSYA 190
                A
Sbjct: 184 LSSDGA 189


>gi|268601717|ref|ZP_06135884.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|291043425|ref|ZP_06569146.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|268585848|gb|EEZ50524.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|291012661|gb|EFE04646.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 149

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 13/153 (8%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G + DI ++++  +  + +      L  +    L++F++++ G +T+ DC  +S  +S +
Sbjct: 4   GSSMDIQTILEKTLPGLGYELADFELAAQG--TLRVFIDKE-GGITVEDCATVSNHLSRV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             VE+I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G  
Sbjct: 61  FMVEDI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCE 118

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +  + +         + I   ++  ARL
Sbjct: 119 NDTVTVSFDGK--------TVQIELGNIDKARL 143


>gi|261379109|ref|ZP_05983682.1| hypothetical protein NEICINOT_05033 [Neisseria cinerea ATCC 14685]
 gi|269144429|gb|EEZ70847.1| hypothetical protein NEICINOT_05033 [Neisseria cinerea ATCC 14685]
          Length = 143

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLSRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TVSFDGK--------TVQIEIDNIDKARL 137


>gi|21231946|ref|NP_637863.1| hypothetical protein XCC2513 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|188991043|ref|YP_001903053.1| hypothetical protein xccb100_1647 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|34223123|sp|Q8P7U5|RIMP_XANCP RecName: Full=Ribosome maturation factor rimP
 gi|226736393|sp|B0RRB2|RIMP_XANCB RecName: Full=Ribosome maturation factor rimP
 gi|21113675|gb|AAM41787.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|167732803|emb|CAP50997.1| YhbC family protein [Xanthomonas campestris pv. campestris]
          Length = 196

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 12/157 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + D  + + DCE +S+ 
Sbjct: 5   ATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +        +     G+       + I FD++  AR+
Sbjct: 125 VRIDTEAAAVVFSVDGK------DVQIGFDNIDKARI 155


>gi|121635281|ref|YP_975526.1| hypothetical protein NMC1555 [Neisseria meningitidis FAM18]
 gi|259585799|sp|A1KV49|RIMP_NEIMF RecName: Full=Ribosome maturation factor rimP
 gi|120866987|emb|CAM10750.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
 gi|325128689|gb|EGC51555.1| hypothetical protein NMXN1568_0547 [Neisseria meningitidis N1568]
 gi|325132775|gb|EGC55457.1| hypothetical protein NMBM6190_0488 [Neisseria meningitidis M6190]
 gi|325136709|gb|EGC59309.1| hypothetical protein NMBM0579_0602 [Neisseria meningitidis M0579]
 gi|325138661|gb|EGC61217.1| hypothetical protein NMBES14902_0645 [Neisseria meningitidis
           ES14902]
 gi|325205640|gb|ADZ01093.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
          Length = 143

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|298369369|ref|ZP_06980687.1| hypothetical protein HMPREF9016_01039 [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298283372|gb|EFI24859.1| hypothetical protein HMPREF9016_01039 [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 157

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +++   +  + +  V   L  + +  L+IF++++ G +T+ DC  +S  +S +  VE
Sbjct: 16  DIQNILDKTLPGLGYELVDFELTAQGD--LRIFIDKE-GGITVEDCATVSNHLSRVFTVE 72

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 73  DI--DYKRLEISSPGLDRPLKKAADFVRFAGRQAKIKTRLPIDGQKNFIGRIENCKNGTV 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I FD++  ARL
Sbjct: 131 SISFDGKS--------VDIEFDNIDKARL 151


>gi|258404631|ref|YP_003197373.1| hypothetical protein Dret_0498 [Desulfohalobium retbaense DSM 5692]
 gi|257796858|gb|ACV67795.1| protein of unknown function DUF150 [Desulfohalobium retbaense DSM
           5692]
          Length = 157

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +S +I+P+          + +   +  +L+++V+  +G +++  C  LS+ IS  L
Sbjct: 5   LYERLSELIKPLAASCGLDVWGMEIPASRGGVLRVYVDSPNG-VSIDQCATLSRHISVTL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ + G Y LEVSSPG++RP    S    + G  VA ++      ++K  G ++    
Sbjct: 64  DVEDPLPGPYTLEVSSPGLERPFFTVSQLPPYIGQPVALKLQAPMQGRKKWRGVLIEAEG 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               L        D++ ++   +++ +  ARL+
Sbjct: 124 DHLTL--------DVDGVEHVFAWEDVEKARLV 148


>gi|29375839|ref|NP_814993.1| hypothetical protein EF1270 [Enterococcus faecalis V583]
 gi|255973019|ref|ZP_05423605.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255976058|ref|ZP_05426644.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256618849|ref|ZP_05475695.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256762267|ref|ZP_05502847.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256852912|ref|ZP_05558282.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256958758|ref|ZP_05562929.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256962136|ref|ZP_05566307.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256965335|ref|ZP_05569506.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|257078787|ref|ZP_05573148.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|257082769|ref|ZP_05577130.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|257085470|ref|ZP_05579831.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|257086617|ref|ZP_05580978.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|257089674|ref|ZP_05584035.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257415888|ref|ZP_05592882.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
 gi|257419090|ref|ZP_05596084.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257422842|ref|ZP_05599832.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|294780120|ref|ZP_06745493.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
 gi|300859867|ref|ZP_07105955.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|34222820|sp|Q835V2|RIMP_ENTFA RecName: Full=Ribosome maturation factor rimP
 gi|29343301|gb|AAO81063.1| conserved hypothetical protein [Enterococcus faecalis V583]
 gi|255964037|gb|EET96513.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255968930|gb|EET99552.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256598376|gb|EEU17552.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256683518|gb|EEU23213.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256711371|gb|EEU26409.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256949254|gb|EEU65886.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256952632|gb|EEU69264.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256955831|gb|EEU72463.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|256986817|gb|EEU74119.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|256990799|gb|EEU78101.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256993500|gb|EEU80802.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|256994647|gb|EEU81949.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|256998486|gb|EEU85006.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257157716|gb|EEU87676.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
 gi|257160918|gb|EEU90878.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257164666|gb|EEU94626.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|294452795|gb|EFG21224.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
 gi|300850685|gb|EFK78434.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|323480501|gb|ADX79940.1| conserved hypothetical protein [Enterococcus faecalis 62]
          Length = 157

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 81/156 (51%), Gaps = 8/156 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ ++ P++EE +F  V++  ++E KN  L++F++++ G + + +C  +S+ +S  L
Sbjct: 5   VETVTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDKE-GGIDIEECAFVSEKLSEKL 63

Query: 81  DV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           D    + I   Y LEVSSPG +RP+ ++SD+ +  G  +   +  +   ++++ G ++  
Sbjct: 64  DAMDPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQIEGTLVHL 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 L  + +        ++     ++  ARL +
Sbjct: 124 DSEQLTLSVKIKTRVK----EMTFERKNIAKARLAI 155


>gi|223044231|ref|ZP_03614268.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
           [Staphylococcus capitis SK14]
 gi|222442381|gb|EEE48489.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
           [Staphylococcus capitis SK14]
          Length = 155

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 78/155 (50%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++IQP+++++ F  V+I  ++E K+  L++ ++++ G + L DC   S+ IS  
Sbjct: 4   ITEQVETIIQPILDDLKFELVEIEYVKEGKDRFLRVSIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ +  DF       +   +       ++ +G +    
Sbjct: 63  MDENDPIPEMYYLDVASPGAERPIKKDKDFQNAVSQPIFVSLYAPIEGDKEWLGILKSVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    +E +++ +      +I I  + +  AR  V
Sbjct: 123 EDNIVMEVKEKSKTK----EIEIPRNKIAKARHAV 153


>gi|251797401|ref|YP_003012132.1| hypothetical protein Pjdr2_3411 [Paenibacillus sp. JDR-2]
 gi|247545027|gb|ACT02046.1| protein of unknown function DUF150 [Paenibacillus sp. JDR-2]
          Length = 153

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ P ++   F  V I  ++E  N  L++FV+++ G + + +C ++S+ +S  LD  
Sbjct: 10  VEAMVTPFLDSNGFELVDIEYVKEGSNYFLRVFVDKE-GGIDIDECGKVSEFLSEELDKN 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + +   Y LEVSSPG +RP+ +  D  +  G  V           ++  G++        
Sbjct: 69  DPVSDAYFLEVSSPGAERPLKKPDDVRKAVGKHVYITTYEPIDGSKEFEGQLTAFDGEQA 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++  K+        +  I +  + SARL +
Sbjct: 129 TVKIGKK--------EHVIPYAKVASARLAI 151


>gi|260583737|ref|ZP_05851485.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633]
 gi|260158363|gb|EEW93431.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633]
          Length = 157

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 8/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +S++  PVIE   F  V +  ++E KN  L+ ++++  G + L DC  +S+  S +
Sbjct: 4   VAELVSTLALPVIEAEGFELVDLEFVKEGKNWFLRFYLDKP-GGIDLDDCAFMSEKFSEL 62

Query: 80  LDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD ++   I   Y LEVSSPG +RP+  + D     G  V          ++ L G +  
Sbjct: 63  LDAQDPDPIPQAYFLEVSSPGAERPLKTEKDLKEAIGQYVHLSFYQQVEGEKFLEGFLTE 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++    LE + +  K      + I  +++  ARL +
Sbjct: 123 VTDESVTLEVKIKTRKKS----VTIVRENIAKARLAI 155


>gi|302872116|ref|YP_003840752.1| hypothetical protein COB47_1477 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574975|gb|ADL42766.1| protein of unknown function DUF150 [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 151

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELSDK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ K+ G+++  +
Sbjct: 63  LDIADPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGRVVDVFLKQPFLNRTKITGELVEKN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    L  +K          I I  +++   +L +
Sbjct: 123 EKSLVLIVDKEK--------IDIPVENVKKVKLAI 149


>gi|254521461|ref|ZP_05133516.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
 gi|219719052|gb|EED37577.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
          Length = 196

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 83/158 (52%), Gaps = 12/158 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A DI++++ P +  +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +DVE+ I G+Y LEVSSPG+DRP+     F R  G +    + L   ++++L G+I
Sbjct: 65  VSAQMDVEDPISGNYTLEVSSPGVDRPLFNLEQFGRHLGEMAKVTLKLPQDNRRRLQGRI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             T E    +         +++ ++ +S D++  AR++
Sbjct: 125 EATDEAADTITF------VVDKTEVIVSADNIDKARIM 156


>gi|289207908|ref|YP_003459974.1| hypothetical protein TK90_0723 [Thioalkalivibrio sp. K90mix]
 gi|288943539|gb|ADC71238.1| protein of unknown function DUF150 [Thioalkalivibrio sp. K90mix]
          Length = 151

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 10/151 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E   F    +        + L+I+++  +G +T+ DC  +S+    +L+
Sbjct: 6   EQLKTLLAPVVEGQGFVFWGLEYHPGSKPVMLRIYIDSPEG-VTVDDCALVSEQAGAVLE 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE  + G+Y LEVSSPGI+RP+     +  + GH V   +      ++   G ++G  E 
Sbjct: 65  VEQALRGNYTLEVSSPGIERPLFTPDQYRGYIGHPVKVRLSWPEHGRRNYRGTLIGVDEE 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +E +  G          +  +++ +AR+
Sbjct: 125 MIEVEVDGTGY--------ELPLNAIHNARV 147


>gi|116492652|ref|YP_804387.1| hypothetical protein PEPE_0886 [Pediococcus pentosaceus ATCC 25745]
 gi|122265884|sp|Q03FS7|RIMP_PEDPA RecName: Full=Ribosome maturation factor rimP
 gi|116102802|gb|ABJ67945.1| hypothetical protein PEPE_0886 [Pediococcus pentosaceus ATCC 25745]
          Length = 158

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++QP+ +  +F  V++  ++E     L++++++  G + + +C  +S  +S 
Sbjct: 4   NVIEKVTELVQPITDRHNFELVEVEFVKEGQGWFLRVYIDKV-GGINIEECAMVSDELSE 62

Query: 79  ILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           ILD ++   I   Y LEVSSPG +RP+  K D  R  G  +   +  S   ++   G + 
Sbjct: 63  ILDAQDPDPIPQAYFLEVSSPGAERPLKTKEDLTRSIGEYIHISLYASINKQKVFEGYLK 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   L+   +        ++ +++D +  ARL +
Sbjct: 123 SFENDEIVLDYLDKTRHK----ELKVTYDQVAFARLAI 156


>gi|90416133|ref|ZP_01224065.1| hypothetical protein GB2207_10663 [marine gamma proteobacterium
           HTCC2207]
 gi|90331858|gb|EAS47072.1| hypothetical protein GB2207_10663 [marine gamma proteobacterium
           HTCC2207]
          Length = 151

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 80/155 (51%), Gaps = 10/155 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + +++QPV+E +      + L    K  LL+I+++R+DG + + DCE +S+    
Sbjct: 3   AVDSTLKALLQPVVEALDCELWGLELQSGGKRKLLRIYIDREDG-IGVEDCERVSRQSGS 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE++I G Y LEVSSPG+DRP+   + + R+ G  V+  +  +   ++   G+++G 
Sbjct: 62  VLDVEDVISGEYILEVSSPGMDRPLYELAQYERYIGEDVSLRLRFAYDGRRNFKGRLVGV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 L         + + +     + +  A ++
Sbjct: 122 DGDEIVL--------VVADTEYLFPVEGIDKANVV 148


>gi|121535259|ref|ZP_01667073.1| protein of unknown function DUF150 [Thermosinus carboxydivorans
           Nor1]
 gi|121306144|gb|EAX47072.1| protein of unknown function DUF150 [Thermosinus carboxydivorans
           Nor1]
          Length = 152

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++Q +I + +   V +  ++E+N  L++F+++  G + + DC+ +S+ +   LD  +
Sbjct: 10  VERLVQDIITDTNMELVDVEYVKERNWYLRVFLDKP-GGIEVEDCQWVSEQLEVKLDELD 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I+  Y LEVSSPG+DRP+ +  DF+R  G  V           + ++G + G SET   
Sbjct: 69  PIKESYYLEVSSPGLDRPLKKDRDFIRHIGEKVEVHTFAPLNGSKLVVGTLTGISETDIH 128

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           L        D+N   +++  D     +L +
Sbjct: 129 L--------DVNGTALSVPRDKTAQVKLYL 150


>gi|84624710|ref|YP_452082.1| hypothetical protein XOO_3053 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|161898973|ref|YP_201860.2| hypothetical protein XOO3221 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|91208349|sp|Q5GXU6|RIMP_XANOR RecName: Full=Ribosome maturation factor rimP
 gi|91208413|sp|Q2P0W9|RIMP_XANOM RecName: Full=Ribosome maturation factor rimP
 gi|259645271|sp|B2SVK5|RIMP_XANOP RecName: Full=Ribosome maturation factor rimP
 gi|84368650|dbj|BAE69808.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 196

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P ++ +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVDSLGVELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I GHY LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGHYTLEVSSPGVDRPLFTLEQFARHAGESTKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +                  ++   + I FD++  AR+
Sbjct: 125 LRIDAEA------GAVVFAIDGKDVQIGFDNIDKARI 155


>gi|56551453|ref|YP_162292.1| hypothetical protein ZMO0557 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761100|ref|ZP_04759189.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752934|ref|YP_003225827.1| hypothetical protein Za10_0696 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|81355359|sp|Q5NQ24|RIMP_ZYMMO RecName: Full=Ribosome maturation factor rimP
 gi|56543027|gb|AAV89181.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374719|gb|EER64180.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552297|gb|ACV75243.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 184

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 10/161 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD-GNMTLRDCEELSQAISPILDV 82
           I+++++P ++ +    V+I++   K +  LQI  ER D   + L +CE LS+ +S I D 
Sbjct: 16  ITALVEPEVKALGLELVRIAMFGGKSDPTLQIMAERPDTRQIGLTECEALSRRLSEIFDE 75

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE-T 141
           ++ IE  YRLEVSSPGIDRP+ R+ D+  W G      +      +++  G+I+G  +  
Sbjct: 76  QDPIEDAYRLEVSSPGIDRPLTRRKDYQDWKGFSARIRLSAPLDGRKQFDGEIIGIDDAD 135

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
              L+  K G+K        + F ++  ++L++TD L+ A+
Sbjct: 136 NVILDCPKVGQKI-------LPFSAIERSKLLLTDALIAAT 169


>gi|158523047|ref|YP_001530917.1| hypothetical protein Dole_3037 [Desulfococcus oleovorans Hxd3]
 gi|158511873|gb|ABW68840.1| protein of unknown function DUF150 [Desulfococcus oleovorans Hxd3]
          Length = 181

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 12/168 (7%)

Query: 13  PRIFGDMG-LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER--DDGNMTLRD 68
           PR+ G    +   +  +++PV        V +   +E +  +L++++     D  +TL D
Sbjct: 18  PRLMGGGNPVVAQMWKLVEPVCSAEGMELVFVEFNKESQGRVLRLYLASGVPDRGVTLED 77

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           C  +S+ ++ +LDV      +Y LEVSS G++RP+ ++ DF R+ G  V         D+
Sbjct: 78  CAGISRQVNGLLDVYLPELDNYTLEVSSAGLERPLAKEIDFERFAGSRVKIRTAAPVSDR 137

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +   G ++G S+    L  + +           I +  +  A+L+  D
Sbjct: 138 KNFTGILLGVSDGNVRLMVDDK--------TFVIPYGEITRAKLVNED 177


>gi|254805396|ref|YP_003083617.1| hypothetical protein NMO_1459 [Neisseria meningitidis alpha14]
 gi|254668938|emb|CBA07181.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
 gi|254669625|emb|CBA03670.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
 gi|325201700|gb|ADY97154.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
 gi|325208564|gb|ADZ04016.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
          Length = 143

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKESG-ITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TISFDGK--------TVQIELGNIDKARL 137


>gi|146297078|ref|YP_001180849.1| hypothetical protein Csac_2073 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|226701152|sp|A4XL73|RIMP_CALS8 RecName: Full=Ribosome maturation factor rimP
 gi|145410654|gb|ABP67658.1| protein of unknown function DUF150 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 151

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E+  F  V I   +E K   L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   VTKKVEELVKPILEKYGFDLVDIEFKKEGKKHFLRVYIDKP-GGITIDDCQLVSEELSNK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     +  KL G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVNDRDFIRNKGRVVDVFLKQPIMNTTKLTGELVEKN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    +  +           I+I F+++   ++ +
Sbjct: 123 EDVLIIMIDGE--------NISIPFENVKKVKVAI 149


>gi|88812962|ref|ZP_01128205.1| hypothetical protein NB231_03777 [Nitrococcus mobilis Nb-231]
 gi|88789740|gb|EAR20864.1| hypothetical protein NB231_03777 [Nitrococcus mobilis Nb-231]
          Length = 150

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 85/157 (54%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++ V++PV+  M +  V I     K+  LL+I++++ DG +++ DC  +S  IS
Sbjct: 1   MTALDTLTKVVEPVVAAMGYELVGIEYRPSKSQALLRIYIDKADG-ISVEDCALVSNQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ + G Y LEVSSPG+ RP+ + SD+ R+ G +V   I  +   ++++ G + G
Sbjct: 60  GVLDVEDPLSGRYTLEVSSPGLRRPIFKASDYERFAGELVHIRIRGTLDGRRRIHGLLRG 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  + +        N ++I++  + +  A L +
Sbjct: 120 LRADCVIVVE--------NGIEISVPLNRVDKANLEL 148


>gi|317471573|ref|ZP_07930919.1| hypothetical protein HMPREF1011_01267 [Anaerostipes sp. 3_2_56FAA]
 gi|316900952|gb|EFV22920.1| hypothetical protein HMPREF1011_01267 [Anaerostipes sp. 3_2_56FAA]
          Length = 154

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 10/161 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELS 73
           + G   +      ++ P+I+E  F  V +  ++E  N  L+I+ +++ G +++ DC  +S
Sbjct: 1   MAGKAEIEQKTEELVTPIIDENHFELVDVEYVKEGANWYLRIYADKE-GGISIDDCVLIS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+   LD ++ I+  Y LEVSSPG+ RP+ ++ DF R  G  V  ++  +   +++  G
Sbjct: 60  RALEAKLDADDFIKDAYILEVSSPGLGRPLKKEKDFQRSIGQSVDIKLYKAIDKQKEFTG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +   S+    L  +   +             S+ SARL +
Sbjct: 120 ILKEYSKERIILSIDGTDQ--------EFETKSVASARLSL 152


>gi|153954052|ref|YP_001394817.1| hypothetical protein CKL_1427 [Clostridium kluyveri DSM 555]
 gi|219854665|ref|YP_002471787.1| hypothetical protein CKR_1322 [Clostridium kluyveri NBRC 12016]
 gi|189038691|sp|A5N838|RIMP_CLOK5 RecName: Full=Ribosome maturation factor rimP
 gi|254800038|sp|B9E1J8|RIMP_CLOK1 RecName: Full=Ribosome maturation factor rimP
 gi|146346933|gb|EDK33469.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219568389|dbj|BAH06373.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 154

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +I+P+++ ++F    +    E N   L+IF+++++GN++L DCE +S+A+S I
Sbjct: 6   LVERVLKLIKPIVDNLNFELYHLEFKREGNNNYLRIFIDKEEGNISLEDCEAVSRAVSDI 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ I   Y LEVSSPGI+R +       R+ G  V   I      K+K  GK++   
Sbjct: 66  LDREDPIRDPYYLEVSSPGIERTLYTHEHLKRYIGFNVIVNIQGLLKGKKKYQGKLLSFD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E+   +  E          +I I    + +  L
Sbjct: 126 ESVLRVSCEGE--------EIVIPKSKISTVNL 150


>gi|295687484|ref|YP_003591177.1| hypothetical protein Cseg_0027 [Caulobacter segnis ATCC 21756]
 gi|295429387|gb|ADG08559.1| protein of unknown function DUF150 [Caulobacter segnis ATCC 21756]
          Length = 196

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 12/182 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERD------DGNMTLR 67
           + G      D+  ++ PV E + +  V++ L+       LQI  E         G+M + 
Sbjct: 1   MRGKTQEDRDLIEMLDPVAESLGYEIVRLRLMGGAEQRRLQIMAEHPLLEDGTGGDMNVE 60

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DC  LS+ IS ILD  + I G Y LEVSSPG+DRP+ R  DF  + G     E+   +  
Sbjct: 61  DCARLSRGISEILDAADPIAGEYTLEVSSPGVDRPLTRLKDFEDYAGLEARIELDRVAEG 120

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G++ G  +    L  E       +++ +   F  ++ A+L++TD L+        
Sbjct: 121 RKRFKGELAGIEDDQVGLNIEGE-----DDVTVYFPFAWIIDAKLVMTDTLMDRGAKQRA 175

Query: 188 SY 189
           + 
Sbjct: 176 AR 177


>gi|319896983|ref|YP_004135178.1| hypothetical protein HIBPF06790 [Haemophilus influenzae F3031]
 gi|317432487|emb|CBY80844.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 141

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S ILDVE+ I
Sbjct: 1   MLQDAVEDLGCELWGIECQRMGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    +    L 
Sbjct: 60  ADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIEKDMITLI 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            + + +         + F ++  A ++
Sbjct: 120 VDDQEQI--------LVFGNIQKANVV 138


>gi|229552420|ref|ZP_04441145.1| protein of hypothetical function DUF150 [Lactobacillus rhamnosus
           LMS2-1]
 gi|229314157|gb|EEN80130.1| protein of hypothetical function DUF150 [Lactobacillus rhamnosus
           LMS2-1]
          Length = 167

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++++++P++++  F    +  ++E     L++++++  G +TL +C  +S+A+S 
Sbjct: 13  SVVETVTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDKP-GGITLDECVLVSEALSE 71

Query: 79  ILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ R++D+ +  G  +   +      K+   G + 
Sbjct: 72  QLDAINPDPIPQQYFLEVSSPGAERPLKRETDYEQAIGDYIHVSLFKKLDGKKVFEGTLK 131

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   L  + +  K        I    + SARL +
Sbjct: 132 DLKPDQLTLTVKDKSRKFDQ----VIDRKLIASARLAI 165


>gi|323141192|ref|ZP_08076093.1| hypothetical protein HMPREF9443_00865 [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414335|gb|EFY05153.1| hypothetical protein HMPREF9443_00865 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 187

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           E ++     +   I++++ P++++     V +  + EK+  L+IF+++  G + + DC+ 
Sbjct: 26  EVKMMQAKEVEALITAMVDPLLQDTGLTLVDVEYVREKDWYLRIFLDKP-GGVEIDDCQM 84

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ ++ ILD E+ I   Y LEVSSPGIDRP+ +  DF    G  V           + L
Sbjct: 85  VSEKLTEILDAEDPIPDKYFLEVSSPGIDRPLKKDKDFEAAYGTKVDIMFYTPWEGMKNL 144

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIA 161
            G ++   +    ++K  +G++  N  +I 
Sbjct: 145 TGILVAHDDEAVQVKKIIKGKEFKNPDRIE 174


>gi|288871536|ref|ZP_06117961.2| protein associated with NUS operon [Clostridium hathewayi DSM
           13479]
 gi|288863081|gb|EFC95379.1| protein associated with NUS operon [Clostridium hathewayi DSM
           13479]
          Length = 162

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                  + P++EE  F  V +  ++E  N  L+ +++++ G +T+ DCE +S+ +   L
Sbjct: 15  EKKTEDYLLPLMEEYHFELVDVEYVKEAGNWYLRAYIDKE-GGITVDDCEVVSRRLGDWL 73

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y LEVSSPG+ RP+ +  DF R  G  V  ++      ++   G +    +
Sbjct: 74  DEKDFIEDSYILEVSSPGLGRPLKKDKDFDRSIGKDVDIKLYKPMNKQKDYTGTLKAYDK 133

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   E  +N  +IA+
Sbjct: 134 DTVTVTVEDGTELVLNRPEIAL 155


>gi|114331634|ref|YP_747856.1| hypothetical protein Neut_1648 [Nitrosomonas eutropha C91]
 gi|114308648|gb|ABI59891.1| protein of unknown function DUF150 [Nitrosomonas eutropha C91]
          Length = 160

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 14/166 (8%)

Query: 11  YEPRIFGDMGLAGD---ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
           +E  + G   + G+   +  +++P I  M +  V I        LL++FV++ DG +TL 
Sbjct: 3   FEGGLVGPFFICGEAMSLFELLEPTIAGMGYELVDIE-QSAPGRLLRVFVDKKDGAITLA 61

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DC  +S  +  +L VENI   + RLEVSSPG+DRP+ +++DF+R+ G  +   + ++   
Sbjct: 62  DCVAVSNHLGQLLAVENI--DYNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQG 119

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++  +G +    +    L  + +         +     +L  ARLI
Sbjct: 120 QRNFVGTLTEVGDDALMLNVDGK--------LLQFELKNLEKARLI 157


>gi|332686769|ref|YP_004456543.1| clustered with transcription termination protein NusA
           [Melissococcus plutonius ATCC 35311]
 gi|332370778|dbj|BAK21734.1| clustered with transcription termination protein NusA
           [Melissococcus plutonius ATCC 35311]
          Length = 157

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 78/158 (49%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++ P++E+  F  + +  ++E K+  L++F+++  G + + +C  +S+ +S 
Sbjct: 3   SIIETVTKLVTPILEKQQFELIDVEFIKEGKSWYLRVFIDKK-GGIDIEECAFVSEQLSE 61

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+  + D+    G  +   +  +    ++  G + 
Sbjct: 62  QLDSLEPDPIPQAYFLEVSSPGAERPLKNEHDYFNAIGEYIHLSLYQAVEGIKQFEGILE 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              E    +E + + ++     +  I+  ++  ARL +
Sbjct: 122 SIDEEQVVIEVKIKTQRK----KYIINRKNIAKARLAI 155


>gi|291562552|emb|CBL41368.1| Uncharacterized protein conserved in bacteria [butyrate-producing
           bacterium SS3/4]
          Length = 155

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +   + P++EE +F  V +  ++E     L+ +++++ G  T+ DCE +S+ +S  L
Sbjct: 8   ESRVEKFLIPIMEENNFELVDVEYVKEAGTWYLRAYIDKE-GGFTVDDCEMVSRRLSDWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y LEVSSPG+ RP+ ++ DF R  G  V  ++  +   ++   G +     
Sbjct: 67  DKEDFIDDSYILEVSSPGLGRPLKKEKDFKRSLGEAVDIKLYRAIERQKDFSGILTAYDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   E   N   IA+
Sbjct: 127 DTVTIRYEDGSENTFNRKDIAL 148


>gi|148244224|ref|YP_001218918.1| hypothetical protein COSY_0057 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166919105|sp|A5CXX4|RIMP_VESOH RecName: Full=Ribosome maturation factor rimP
 gi|146326051|dbj|BAF61194.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 153

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 8/155 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ +I+PVIE M +  + I  +   K  +L+IF++  + ++++ DCE +S+ +S I
Sbjct: 4   VTDKITHLIKPVIEGMGYELLGIEYVASGKYSILRIFIDT-NKSISVNDCEIVSRQLSSI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            D+E  I G Y LEVSSPGI+RP+  K  +  + G  V   +      +    G I   S
Sbjct: 63  FDIEEPISGQYNLEVSSPGIERPLFHKGHYQCFLGFNVKLHMFRPISGQSNFFGVIGSVS 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    +E             I +  D +  A L+V
Sbjct: 123 EINNTIELVGE------LGAIILDIDLIKKANLVV 151


>gi|163791588|ref|ZP_02185989.1| hypothetical protein CAT7_03409 [Carnobacterium sp. AT7]
 gi|159873137|gb|EDP67240.1| hypothetical protein CAT7_03409 [Carnobacterium sp. AT7]
          Length = 157

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 8/155 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++ ++QP++E   F  V I  ++E  N  L++++++ +G + L DC  +S+ IS 
Sbjct: 3   NVVETVTEIVQPIVERNQFELVDIEFVKEGQNWFLRVYIDKPEG-IDLEDCALVSEQISQ 61

Query: 79  ILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            +D  +   I   Y LEVSSPG +RP+ ++ D+    G  +   +      ++   G + 
Sbjct: 62  HMDKIDPDPIPQAYFLEVSSPGAERPLKKEQDYTDSIGEYIHISLYEPVDGEKVYEGTLK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             ++    L    +         I  S   +  AR
Sbjct: 122 EVNDETLTLTIRVKTRVK----DIDFSRKIIAKAR 152


>gi|153004005|ref|YP_001378330.1| hypothetical protein Anae109_1138 [Anaeromyxobacter sp. Fw109-5]
 gi|259585695|sp|A7H9F0|RIMP_ANADF RecName: Full=Ribosome maturation factor rimP
 gi|152027578|gb|ABS25346.1| protein of unknown function DUF150 [Anaeromyxobacter sp. Fw109-5]
          Length = 171

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 17/165 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +A     V++PV+    +  V++  L +     L++FV++  G + + DC+ +S+
Sbjct: 4   IAEESIAERTRRVLEPVLARDGYELVEVEWLRQGSRWTLRLFVDKP-GGVGIEDCQAVSR 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD------- 127
            + PILDVE+ IE  Y LEVSSPG+DRP+ + +DF R+ G     +              
Sbjct: 63  LVDPILDVEDFIEPAYDLEVSSPGLDRPLRKPADFDRYAGQRAHVKAYGPVAGTAPGSPA 122

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++   G ++G  +    +        D++ +   +  D +  A L
Sbjct: 123 RKNWTGVLVGYRDGAVEI--------DVDGVVHRVPHDQIAKAHL 159


>gi|118602110|ref|YP_903325.1| hypothetical protein Rmag_0052 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166919103|sp|A1AV97|RIMP_RUTMC RecName: Full=Ribosome maturation factor rimP
 gi|118567049|gb|ABL01854.1| protein of unknown function DUF150 [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 154

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 7/155 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ +I+ VI++M +  V I  +   K+ +L++F++ D   + + DCE++S+ +S I
Sbjct: 4   VTDKITHLIELVIKDMCYELVGIEYVASGKHSILRVFIDTDKKGVGVNDCEKVSRQLSSI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE  I G Y LEVSSPGI+RP+  K  + R+ G  V   +V     ++   G I   +
Sbjct: 64  FDVEEPISGQYTLEVSSPGIERPLFHKEHYQRFLGANVKLRMVRPIDGRRNFFGVIGCVN 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E     E     +       + +  D +  A L+V
Sbjct: 124 EADNTFELVGELDL------VILDIDLIEKANLVV 152


>gi|316984983|gb|EFV63937.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|319410894|emb|CBY91288.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
 gi|325130690|gb|EGC53430.1| hypothetical protein NMBOX9930304_0543 [Neisseria meningitidis
           OX99.30304]
 gi|325140714|gb|EGC63228.1| hypothetical protein NMBCU385_0550 [Neisseria meningitidis CU385]
 gi|325144893|gb|EGC67180.1| hypothetical protein NMBM01240013_0663 [Neisseria meningitidis
           M01-240013]
 gi|325199765|gb|ADY95220.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325204602|gb|ADZ00056.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
          Length = 143

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDKESG-ITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|154485018|ref|ZP_02027466.1| hypothetical protein EUBVEN_02736 [Eubacterium ventriosum ATCC
           27560]
 gi|149733971|gb|EDM50090.1| hypothetical protein EUBVEN_02736 [Eubacterium ventriosum ATCC
           27560]
          Length = 147

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
            ++I P+++E  F  V +  ++E  N  L+ +V+++ G +T+ D E +S+ +S  LD E+
Sbjct: 4   EALITPIVDEKGFELVDVEYVKEGSNWYLRAYVDKE-GGITINDLESVSRILSDKLDEED 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPG+ RP+ +  DF R  G+ +   +  +   +++L+G +   +     
Sbjct: 63  FISDAYILEVSSPGLGRPLKKDKDFDRNMGNEIEVHLYRAVDRQKQLVGLLKAYNADTIT 122

Query: 145 LEKEKRGEKDMNELQIAISFDSLL 168
           +E E   E D++ + +++   ++ 
Sbjct: 123 IENEDGSETDIDRVNVSLVRPTID 146


>gi|217967592|ref|YP_002353098.1| protein of unknown function DUF150 [Dictyoglomus turgidum DSM 6724]
 gi|259585754|sp|B8E2Y4|RIMP_DICTD RecName: Full=Ribosome maturation factor rimP
 gi|217336691|gb|ACK42484.1| protein of unknown function DUF150 [Dictyoglomus turgidum DSM 6724]
          Length = 156

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  +++P+ E+ S+  V +    E    +L++++++  G +T+ DC  +S+ IS
Sbjct: 7   MELLKKLKDIVEPICEKYSYELVDLEYRREPHGWVLRVYIDKV-GGVTVEDCAYISEKIS 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+++ I   Y LEVSSPG+DRP+ RK DF R  G  V   ++     K+K+ GKI  
Sbjct: 66  KELDIKDPIPHSYILEVSSPGLDRPLKRKRDFERHIGEKVNITLLEEIEGKKKVEGKIFK 125

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    L         +++  + I  + +  A LIV
Sbjct: 126 VDEKNVTL--------KVDDSLMVIPIEKIKKALLIV 154


>gi|194366590|ref|YP_002029200.1| hypothetical protein Smal_2817 [Stenotrophomonas maltophilia
           R551-3]
 gi|226701526|sp|B4SQS2|RIMP_STRM5 RecName: Full=Ribosome maturation factor rimP
 gi|194349394|gb|ACF52517.1| protein of unknown function DUF150 [Stenotrophomonas maltophilia
           R551-3]
          Length = 196

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 12/158 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A DI++++ P +  +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +DVE+ I G+Y LEVSSPG+DRP+     F R  G      + L   ++++L G+I
Sbjct: 65  VSAQMDVEDPISGNYTLEVSSPGVDRPLFNLEQFGRHLGESAKVTLKLPQDNRRRLQGRI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               E              +++ ++ +S D++  AR++
Sbjct: 125 EAIDEAA------GAITFIVDKAEVVVSADNIDKARIM 156


>gi|15924255|ref|NP_371789.1| hypothetical protein SAV1265 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926848|ref|NP_374381.1| hypothetical protein SA1108 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148267755|ref|YP_001246698.1| hypothetical protein SaurJH9_1325 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393814|ref|YP_001316489.1| hypothetical protein SaurJH1_1351 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156979586|ref|YP_001441845.1| hypothetical protein SAHV_1255 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315621|ref|ZP_04838834.1| hypothetical protein SauraC_05652 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253733497|ref|ZP_04867662.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|255006052|ref|ZP_05144653.2| hypothetical protein SauraM_06265 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257795679|ref|ZP_05644658.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258416082|ref|ZP_05682350.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258421665|ref|ZP_05684589.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258434821|ref|ZP_05688895.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258444603|ref|ZP_05692932.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258447564|ref|ZP_05695708.1| hypothetical protein SAIG_00219 [Staphylococcus aureus A6300]
 gi|258449406|ref|ZP_05697509.1| hypothetical protein SAHG_00482 [Staphylococcus aureus A6224]
 gi|258454785|ref|ZP_05702749.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|269202882|ref|YP_003282151.1| hypothetical protein SAAV_1240 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892753|ref|ZP_06300988.1| hypothetical protein SGAG_00108 [Staphylococcus aureus A8117]
 gi|282927607|ref|ZP_06335223.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|295406202|ref|ZP_06816009.1| UPF0090 protein [Staphylococcus aureus A8819]
 gi|296274823|ref|ZP_06857330.1| hypothetical protein SauraMR_00705 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297244430|ref|ZP_06928313.1| hypothetical protein SLAG_00512 [Staphylococcus aureus A8796]
 gi|54040041|sp|P67221|RIMP_STAAN RecName: Full=Ribosome maturation factor rimP
 gi|54042669|sp|P67220|RIMP_STAAM RecName: Full=Ribosome maturation factor rimP
 gi|166977846|sp|A7X1P6|RIMP_STAA1 RecName: Full=Ribosome maturation factor rimP
 gi|189038661|sp|A5ISE9|RIMP_STAA9 RecName: Full=Ribosome maturation factor rimP
 gi|189038668|sp|A6U184|RIMP_STAA2 RecName: Full=Ribosome maturation factor rimP
 gi|13701065|dbj|BAB42360.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247035|dbj|BAB57427.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740824|gb|ABQ49122.1| protein of unknown function DUF150 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946266|gb|ABR52202.1| protein of unknown function DUF150 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156721721|dbj|BAF78138.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253728551|gb|EES97280.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|257789651|gb|EEV27991.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257839230|gb|EEV63706.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257842351|gb|EEV66776.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257849182|gb|EEV73164.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257850096|gb|EEV74049.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257853755|gb|EEV76714.1| hypothetical protein SAIG_00219 [Staphylococcus aureus A6300]
 gi|257857394|gb|EEV80292.1| hypothetical protein SAHG_00482 [Staphylococcus aureus A6224]
 gi|257863168|gb|EEV85932.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262075172|gb|ACY11145.1| hypothetical protein SAAV_1240 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590610|gb|EFB95687.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282764750|gb|EFC04875.1| hypothetical protein SGAG_00108 [Staphylococcus aureus A8117]
 gi|285816947|gb|ADC37434.1| clustered with transcription termination protein NusA
           [Staphylococcus aureus 04-02981]
 gi|294968790|gb|EFG44812.1| UPF0090 protein [Staphylococcus aureus A8819]
 gi|297178460|gb|EFH37706.1| hypothetical protein SLAG_00512 [Staphylococcus aureus A8796]
 gi|312829659|emb|CBX34501.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315131059|gb|EFT87043.1| hypothetical protein CGSSa03_05939 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727532|gb|EGG63988.1| hypothetical protein SA21172_0119 [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 155

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++QP++E+++F  V +  ++E ++  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   ITEQVEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ ++ DF       V   + +    +++ +G +   +
Sbjct: 63  MDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQEVN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                ++ + +         I I  D +  AR  V
Sbjct: 123 NETIVVQVKIKARTK----DIEIPRDKIAKARHAV 153


>gi|331007795|ref|ZP_08330908.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC1989]
 gi|330418394|gb|EGG92947.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC1989]
          Length = 163

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 20/166 (12%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVER-----------DDGNMTLR 67
            +   ++++I+PV+E +  +   +   ++ +   L+I++E+            +  + L 
Sbjct: 3   SVQNKLTALIEPVVESLGCQLWGLEYLVQGRQATLRIYIEKAADSESSDDTKKESGVGLH 62

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE++S+ +S +LDVE+ I  HY LEVSSPG+DRP+   + +    G  V+ ++     D
Sbjct: 63  DCEKVSRQVSSVLDVEDPISSHYTLEVSSPGMDRPLFLLAHYHSSVGEKVSIKLSRKFDD 122

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++  IG I G  +    L  E        E +  +  + +  A +I
Sbjct: 123 RKNFIGVIAGVEDDEVILRVE--------EEEYVLPIELIDKANII 160


>gi|304384866|ref|ZP_07367212.1| protein of hypothetical function DUF150 [Pediococcus acidilactici
           DSM 20284]
 gi|304329060|gb|EFL96280.1| protein of hypothetical function DUF150 [Pediococcus acidilactici
           DSM 20284]
          Length = 168

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 74/158 (46%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I+ + +PVIE   F+ V++  ++E     L+ ++++  G + + +C  +S  +S 
Sbjct: 14  NVVEKITELARPVIESHDFQLVEVEFVKEGQGWFLRFYIDKV-GGINIEECAMVSDELSE 72

Query: 79  ILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           +LD ++   I   Y LEVSSPG +RP+  K D     G  +   +  S   ++   G + 
Sbjct: 73  LLDQQDPDPIPQAYFLEVSSPGAERPLKTKEDLAAAVGEYIHISLYASINKQKVFEGYLK 132

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   L+   +        ++ ++++ +  ARL +
Sbjct: 133 SFENDELVLDYLDKTRHK----ELKVAYNQVAFARLAI 166


>gi|119504357|ref|ZP_01626437.1| hypothetical protein MGP2080_00755 [marine gamma proteobacterium
           HTCC2080]
 gi|119459865|gb|EAW40960.1| hypothetical protein MGP2080_00755 [marine gamma proteobacterium
           HTCC2080]
          Length = 166

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +S ++ P +E + F    + LL   +   L++F+E D G +++ DC ++S+ +  
Sbjct: 3   GKESRLSELLTPTVESLGFELWGLELLSPNRRPTLRLFIEGDTG-VSVDDCAKVSRHVGG 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y LEVSSPGIDR + +   +  + G  +  ++      +++  G +MG 
Sbjct: 62  VLDVEDPISGDYTLEVSSPGIDRLLFKVDQYGLYIGEPIEVKLRFPFEGRRRFRGWLMGI 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 +  E             +    +  AR+
Sbjct: 122 EGEDVVVRVEDHDYL--------LPLKQIDRARV 147


>gi|259586208|sp|Q086H4|RIMP_SHEFN RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++   +E + F+   I  ++  ++ +L++F++ ++G + + DC E S+ +S +
Sbjct: 4   IESKLVEMLTVPVEALGFKLWGIEYIQAGRHSILRVFIDHENG-INIEDCAEASRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+     +  + G     ++ +     + L G I    
Sbjct: 63  MDVEDPISTEYTLEVSSPGVDRPLFTAEQYRAYIGEETKVQLTMPVAGSRNLKGVISSVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +  + +         + ++ D++    +I
Sbjct: 123 GQMLTITVDGK--------DLIVALDNIRKGNVI 148


>gi|51473735|ref|YP_067492.1| hypothetical protein RT0541 [Rickettsia typhi str. Wilmington]
 gi|81390042|sp|Q68WI2|RIMP_RICTY RecName: Full=Ribosome maturation factor rimP
 gi|51460047|gb|AAU04010.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
          Length = 161

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 87/164 (53%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I+++I+  + +M F  V +        +++I ++  +GN +++ DC  +S+ IS I
Sbjct: 4   IEQQITNIIEESLTDMGFELVLVKFKGVNTKVVEILIDSLNGNKISIEDCTNVSRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS GI+R +V+  ++ R+ G  V  ++      K    GKI+   
Sbjct: 64  LDVEDLIEDAYSLEVSSSGIERKLVKFENYNRFLGREVKVKLKALLNGKTLYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +L           E ++ I F+ + +A L++T+E+ +  L
Sbjct: 124 NNKIYL--------KCAEQEVLIDFNLIKNANLVLTEEVFKKLL 159


>gi|103486102|ref|YP_615663.1| hypothetical protein Sala_0609 [Sphingopyxis alaskensis RB2256]
 gi|123380087|sp|Q1GVJ2|RIMP_SPHAL RecName: Full=Ribosome maturation factor rimP
 gi|98976179|gb|ABF52330.1| protein of unknown function DUF150 [Sphingopyxis alaskensis RB2256]
          Length = 181

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 14/166 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPILDV 82
           + ++I P  E M    V+++      +  LQ+  ER D   +T+ DC +LS+ IS  LD 
Sbjct: 7   LHAIIAPEAEAMGLALVRVAFFGGDSDPTLQVMAERPDTRQLTIDDCADLSRRISDRLDA 66

Query: 83  -----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
                ++ I+  YRLEVSSPGIDRP+ R +DF  W GH     +      +Q+  G ++G
Sbjct: 67  LEEAGQDPIDVAYRLEVSSPGIDRPLTRPADFADWAGHEAKIALKEKLDGRQRFNGTLVG 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
                  +  ++        ++  + F ++ +A+L++TD+L+ A++
Sbjct: 127 IDGDVVTISDKE-------GVEHKLPFGAIDTAKLVLTDKLIAATV 165


>gi|227510251|ref|ZP_03940300.1| protein of hypothetical function DUF150 [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227513180|ref|ZP_03943229.1| protein of hypothetical function DUF150 [Lactobacillus buchneri
           ATCC 11577]
 gi|227524395|ref|ZP_03954444.1| protein of hypothetical function DUF150 [Lactobacillus hilgardii
           ATCC 8290]
 gi|227083561|gb|EEI18873.1| protein of hypothetical function DUF150 [Lactobacillus buchneri
           ATCC 11577]
 gi|227088626|gb|EEI23938.1| protein of hypothetical function DUF150 [Lactobacillus hilgardii
           ATCC 8290]
 gi|227189903|gb|EEI69970.1| protein of hypothetical function DUF150 [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 157

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 77/158 (48%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  V++P++++ +F    +  ++E K+  L++++++  G +T+ DC  +S  +S 
Sbjct: 3   NVVETVKQVVKPILDKHTFYLFDVEFVKENKSWYLRVYIDKK-GGITIDDCVLVSDELSE 61

Query: 79  ILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+    +  +  G  +   +  +   ++   G + 
Sbjct: 62  KLDEMDPDPIPQQYFLEVSSPGAERPLRNDEELQQAVGEYIHISLYQNLNGQKAFEGFLR 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     L+ +K G+ D     I I  + +  +RL +
Sbjct: 122 SVTSDELVLQNDKWGKND----TINIPRNLIAKSRLAI 155


>gi|34223001|sp|Q9AC22|RIMP_CAUCR RecName: Full=Ribosome maturation factor rimP
          Length = 178

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 12/169 (7%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD------DGNMTLRDCEELSQAISPIL 80
           ++ PV E + +  V++ L+   +   LQI  E         G+M + DC +LS+A+S +L
Sbjct: 1   MLDPVAESLGYEIVRLRLMGGTEQRRLQIMAEHPLLEDGSGGDMNVEDCAKLSRAVSEVL 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  + I G Y LEVSSPGIDRP+ R  DF  + G     E+   +  +++  G++ G  +
Sbjct: 61  DAADPIAGEYTLEVSSPGIDRPLTRLKDFDDYAGLEARIELDRVAEGRKRFKGELAGVED 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
               L  E       +++ +   F  ++ A+L++TD L+        + 
Sbjct: 121 DQVGLNIEGE-----DDVTVYFPFAWVIDAKLVMTDALMERGAKQRAAR 164


>gi|329847355|ref|ZP_08262383.1| hypothetical protein ABI_04190 [Asticcacaulis biprosthecum C19]
 gi|328842418|gb|EGF91987.1| hypothetical protein ABI_04190 [Asticcacaulis biprosthecum C19]
          Length = 205

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 11/172 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE----EKNLLLQIFVERD-DGNMTLRDCEELSQAISP 78
            +  +  P+  E+    V++ L+          LQI  ER  DG + +  C  LS+A+S 
Sbjct: 10  KLIDIFDPIANELGLNIVRVRLMGSNKPGGARRLQIMAERQSDGEINVNQCARLSRALSA 69

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + I G Y LEVSSPGIDRP+ R  DF  + G+    E+   +  +++  G + G 
Sbjct: 70  FLDEADPISGDYVLEVSSPGIDRPLTRLKDFETYQGYEARIELDRLAEGRKRFRGTLAGV 129

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
                 ++ E   E  +      + F  ++ A+L++TDEL++       +  
Sbjct: 130 EGDHIAIDLEGEPETAL------MPFAWVIDAKLVLTDELMKRGAEMRANRG 175


>gi|312793235|ref|YP_004026158.1| hypothetical protein Calkr_1037 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876953|ref|ZP_07736928.1| protein of unknown function DUF150 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796268|gb|EFR12622.1| protein of unknown function DUF150 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312180375|gb|ADQ40545.1| protein of unknown function DUF150 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 151

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E+  F  V I   +E     L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILEKYGFDLVDIEFKKEGRSYFLRVYIDKP-GGITIDDCQLVSEELSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ K+ G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNRGRVVDVFLNQPFLNRTKITGELVEKN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    L  +K          I I  +++   +L +
Sbjct: 123 EKSLVLIVDKEK--------IDIPVENIKKVKLAI 149


>gi|126253833|sp|Q1RIX2|RIMP_RICBR RecName: Full=Ribosome maturation factor rimP
 gi|259586219|sp|A8GW29|RIMP_RICB8 RecName: Full=Ribosome maturation factor rimP
          Length = 168

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 92/164 (56%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           +   I+ +IQ  + +M F  V + +    + +++I ++R DD  +T+ DC + S  IS I
Sbjct: 4   IEQQITDLIQETLSDMGFELVLVRVKGLSSKVVEILIDRLDDQKVTIEDCTKASNTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS G++RP+V+  ++ R+ G  V  ++      + +  G I+   
Sbjct: 64  LDVEDLIEEAYYLEVSSSGVERPLVKFENYKRFIGREVKIKLKELLNGRSRYQGTIIEAK 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +   +L+ E +        ++ I++D + SA L++T+E+ +  L
Sbjct: 124 DDKVYLKWEDQ--------EVIINYDLIKSANLVLTEEMFKKLL 159


>gi|314933444|ref|ZP_07840809.1| conserved hypothetical protein [Staphylococcus caprae C87]
 gi|313653594|gb|EFS17351.1| conserved hypothetical protein [Staphylococcus caprae C87]
          Length = 155

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 79/155 (50%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++IQP+++++ F  V+I  ++E K+  L++ ++++ G + L DC   S+ IS  
Sbjct: 4   ITEQVETIIQPILDDLKFELVEIEYVKEGKDRFLRVSIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ ++ DF       +   +       ++ +G +    
Sbjct: 63  MDENDPIPEMYYLDVASPGAERPIKKEKDFQNAVSQPIFVSLYAPIEGDKEWLGILKSVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    +E +++ +      +I I  + +  AR  V
Sbjct: 123 EENIVMEVKEKSKTK----EIEIPRNKIAKARYAV 153


>gi|312127898|ref|YP_003992772.1| hypothetical protein Calhy_1688 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777917|gb|ADQ07403.1| protein of unknown function DUF150 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 151

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSYFLRVYIDKP-GGITIDDCQLVSEELSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ K+ G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFVRNRGRVVDVFLNQPFLNRTKITGELVEKN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    L  +K          I I  +++   +L +
Sbjct: 123 EKSLVLIVDKEK--------IDIPVENIKKVKLAI 149


>gi|240116050|ref|ZP_04730112.1| hypothetical protein NgonPID1_07356 [Neisseria gonorrhoeae PID18]
 gi|260440136|ref|ZP_05793952.1| hypothetical protein NgonDG_03444 [Neisseria gonorrhoeae DGI2]
          Length = 143

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +      L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELADFELAAQG--TLRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G      
Sbjct: 59  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|85712988|ref|ZP_01044026.1| Alpha-hemolysin-like protein, hlyA family protein [Idiomarina
           baltica OS145]
 gi|85693157|gb|EAQ31117.1| Alpha-hemolysin-like protein, hlyA family protein [Idiomarina
           baltica OS145]
          Length = 167

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +S +++P +E + F    I  +       L+I++++++G +++ DC ++S  +S +
Sbjct: 19  IEERLSDMLRPAVEALGFELWGIEFVRAGKFSTLRIYIDKEEG-ISVDDCADVSYQVSSV 77

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP    +    + G  VA E+ ++  +K+K    + G  
Sbjct: 78  LDVEDPINTEYNLEVSSPGMERPFFSIAQMQPYIGETVAFELTVAKQNKRKFQAVLEGIE 137

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                L         + +  + +    +  A L+ +
Sbjct: 138 NDQLQL--------SVGQESLTVGMHEIKKAHLVPS 165


>gi|292572171|gb|ADE30086.1| hypothetical protein rpr22_CDS533 [Rickettsia prowazekii Rp22]
          Length = 161

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 89/164 (54%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +A  I+++I+  + +M F  V +        ++++ ++  +GN +++ DC  +S+ IS I
Sbjct: 4   IAQQITNIIEESLTDMGFELVLVKFKGVSPKVVEVLIDSLNGNKISIEDCTNVSRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS GI+R +V+  ++ R+ G  V  ++      K    GKI+   
Sbjct: 64  LDVEDLIEEAYSLEVSSSGIERTLVKFENYNRFLGREVKIKLKELLNGKTLYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +L           E +++I F+ + +A L++T+E+ +  L
Sbjct: 124 NNKIYL--------KCAEQEVSIDFNLIRNANLVLTEEVFKKLL 159


>gi|312622704|ref|YP_004024317.1| hypothetical protein Calkro_1646 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203171|gb|ADQ46498.1| protein of unknown function DUF150 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 151

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ ++ G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGKVVDVFLNQPFLNRTRITGELVEKN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    L  +K          I I  +++   +L +
Sbjct: 123 EKSLILIVDKEK--------IVIPVENIKKVKLAI 149


>gi|239946886|ref|ZP_04698639.1| UPF0090 protein [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921162|gb|EER21186.1| UPF0090 protein [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 166

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 91/164 (55%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +G  +++ DC + S+ IS I
Sbjct: 4   IEQQITNVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNGEKISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS G++RP+V+  ++ R++G  V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEDTYSLEVSSSGLERPLVKFENYNRFSGREVKIKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +L+ E        E ++ I +D + +A L++T+E+ +  L
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLL 159


>gi|169342738|ref|ZP_02863778.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
 gi|169299244|gb|EDS81314.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
          Length = 170

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+ ++  P+++E  +    I  ++E N   L++++E+ +  ++LRDCE +S+A+S +
Sbjct: 22  LVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSRALSDM 81

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E+ I+  Y LEVSSPG++R +     F R+ G  V      S   ++ + G +    
Sbjct: 82  LDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEVFVGFKSSLSGRKNVKGILKDVQ 141

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    +E E          +I +  D + +A L
Sbjct: 142 ENEIIVECEGN--------EIKVPKDKIKTANL 166


>gi|330963973|gb|EGH64233.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 152

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I    + K+ +L+I+++++ G + + DC  +S+ IS +LD
Sbjct: 6   EQLQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKE-GGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVRIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +E+     + + +  +  D +  A +I T
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDLIDKADIIPT 150


>gi|66767927|ref|YP_242689.1| hypothetical protein XC_1603 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|81306096|sp|Q4UWA4|RIMP_XANC8 RecName: Full=Ribosome maturation factor rimP
 gi|66573259|gb|AAY48669.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 196

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + D  + + DCE +S+ 
Sbjct: 5   ATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +        +     G+       + I F ++  AR+
Sbjct: 125 VRIDTEAAAVVFSVDGK------DVQIGFGNIDKARI 155


>gi|259586211|sp|A8FYS2|RIMP_SHESH RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++  +E +      +  ++  K+ +L+++++ + G + + DC E S+ +S +
Sbjct: 4   IENRLEEMLKSPVEALGHTLWGLEYVQAGKHSILRVYIDNEKG-IFIEDCAETSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+ +   +  +    V  ++ +     + L G I G  
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFKAEQYAAYIDETVKIQLTMPVAGSRNLKGTITGIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQMLSLTVDGN--------ELIIALDNIRKGNLI 148


>gi|319776226|ref|YP_004138714.1| hypothetical protein HICON_18130 [Haemophilus influenzae F3047]
 gi|1574740|gb|AAC22931.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|317450817|emb|CBY87039.1| conserved hypothetical protein [Haemophilus influenzae F3047]
          Length = 141

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S ILDVE+ I
Sbjct: 1   MLQDAVEDLGCELWGIECQRVGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    +    L 
Sbjct: 60  ADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIEKDMITLI 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            + + +         + F ++  A ++
Sbjct: 120 VDDQEQI--------LVFGNIQKANVV 138


>gi|238924308|ref|YP_002937824.1| hypothetical protein EUBREC_1947 [Eubacterium rectale ATCC 33656]
 gi|259585772|sp|C4ZBF8|RIMP_EUBR3 RecName: Full=Ribosome maturation factor rimP
 gi|238875983|gb|ACR75690.1| protein of unknown function DUF150 [Eubacterium rectale ATCC 33656]
 gi|291525078|emb|CBK90665.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
           DSM 17629]
 gi|291529173|emb|CBK94759.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
           M104/1]
          Length = 155

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
                S IQP+++ M+F  V +  ++E  +  L+ +++++ G +T+ DCE +++ ++ IL
Sbjct: 8   EAKTESFIQPILDSMNFELVDVEYVKEGGMNYLRAYIDKE-GGITVDDCEVVARQMNEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I   Y  EVSSPG+ RP+ ++ D++R     +      +    ++  G +    +
Sbjct: 67  DREDYIPDSYTFEVSSPGLGRPLKKEKDYVRNMNKEIEIRTYRAINKSKEFYGLLKAYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   E   N+  IA+
Sbjct: 127 DTVTITDEDGNETTFNKSDIAL 148


>gi|170727896|ref|YP_001761922.1| hypothetical protein Swoo_3563 [Shewanella woodyi ATCC 51908]
 gi|226703865|sp|B1KRR2|RIMP_SHEWM RecName: Full=Ribosome maturation factor rimP
 gi|169813243|gb|ACA87827.1| protein of unknown function DUF150 [Shewanella woodyi ATCC 51908]
          Length = 151

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++  +E +      +  ++  K+ +++++++ + G + + DC E+S+ +S +
Sbjct: 4   IENRLEEMLKSPVEALGHTLWGLEYIQAGKHSVVRVYIDNEKG-VFIEDCAEVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  +    V  ++ +     + L G + G  
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFNAEQYTAYIDETVKIQLTMPVAGSRNLKGTVTGVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQMLTLTVDGN--------ELIIALDNIRKGNLI 148


>gi|304310505|ref|YP_003810103.1| Protein of unknown function DUF150 [gamma proteobacterium HdN1]
 gi|301796238|emb|CBL44446.1| Protein of unknown function DUF150 [gamma proteobacterium HdN1]
          Length = 154

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 81/159 (50%), Gaps = 13/159 (8%)

Query: 19  MGLAGDISSV---IQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           M ++  + ++   + P ++        +    + K+ +L++F++ ++G +T+ DCE +S 
Sbjct: 1   MVVSSKLENLKVMLTPAVQAAGMELWGLEFFPQGKHSVLRLFIDSENG-VTIDDCERVSH 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S +LDVE+ + G Y LEVSSPG+DRP+       R+    +   + ++   K+  +GK
Sbjct: 60  QVSAVLDVEDPVSGEYHLEVSSPGMDRPLFGAEQLGRYIHCEIKVRLKMAVDGKRNFVGK 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++  SE         R   +++   + ++   +  A L+
Sbjct: 120 LLAVSED--------RCSFEVDGAPLVVATSQIDKANLV 150


>gi|222529040|ref|YP_002572922.1| hypothetical protein Athe_1048 [Caldicellulosiruptor bescii DSM
           6725]
 gi|254799910|sp|B9MR45|RIMP_ANATD RecName: Full=Ribosome maturation factor rimP
 gi|222455887|gb|ACM60149.1| protein of unknown function DUF150 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 151

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 83/155 (53%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELSEK 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ ++ G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGKVVDVFLNQPFLNRTRITGELVEKN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    L  +K          I I  +++   +L +
Sbjct: 123 EKSLILIVDKEK--------IVIPIENIKKVKLAI 149


>gi|148263955|ref|YP_001230661.1| hypothetical protein Gura_1898 [Geobacter uraniireducens Rf4]
 gi|189030115|sp|A5GF83|RIMP_GEOUR RecName: Full=Ribosome maturation factor rimP
 gi|146397455|gb|ABQ26088.1| protein of unknown function DUF150 [Geobacter uraniireducens Rf4]
          Length = 159

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 14/163 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ + + VI  +    V +    E   ++L++FV+++ G + L DC  +S+
Sbjct: 1   MAKVDVISRVTVLAEQVISSLGMELVDLEYKREGREMVLRLFVDKE-GGVNLDDCASVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
            +S +LDVE++I  HY LEVSSPGIDRP+ +  DF R+ G +V         D     ++
Sbjct: 60  ELSEVLDVEDVISEHYSLEVSSPGIDRPLKKVEDFQRFKGRLVKIRTFEPLPDDAGNKRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +G++ G  E G  L   K G+        AI F+ +  A L
Sbjct: 120 TFLGELKGI-ENGVVLVALKEGQNA------AIPFEKVAKANL 155


>gi|30248763|ref|NP_840833.1| hypothetical protein NE0759 [Nitrosomonas europaea ATCC 19718]
 gi|34222818|sp|Q82WD1|RIMP_NITEU RecName: Full=Ribosome maturation factor rimP
 gi|30180358|emb|CAD84670.1| DUF150 [Nitrosomonas europaea ATCC 19718]
          Length = 143

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 11/149 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++P I  M +  V I        LL++F+++ +G++TL DC  +S  +S +L VEN
Sbjct: 3   LFELLEPTIAGMGYELVDIE-QSAPGRLLRVFIDKKEGSITLDDCVAISNHLSQLLAVEN 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           I   + RLEVSSPG+DRP+ +K+DF+R+ G      + ++   ++  +G ++  ++    
Sbjct: 62  I--DYNRLEVSSPGLDRPLKKKADFVRYMGESARIRLRIALQGQRNFVGTLVEVNDDVLT 119

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLI 173
           L  + +         + I   +L  ARLI
Sbjct: 120 LNADGK--------LLQIELRNLEKARLI 140


>gi|67459265|ref|YP_246889.1| hypothetical protein RF_0873 [Rickettsia felis URRWXCal2]
 gi|75536303|sp|Q4UL49|RIMP_RICFE RecName: Full=Ribosome maturation factor rimP
 gi|67004798|gb|AAY61724.1| Uncharacterized protein [Rickettsia felis URRWXCal2]
          Length = 161

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 90/166 (54%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +G  +++ DC + S+ IS I
Sbjct: 4   IEQQITNVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNGEKISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+ G  V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEDAYSLEVASSGLERPLVKFENYNRFLGREVKIKLKELLNGKTRYQGKIIKAK 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|146329510|ref|YP_001208969.1| hypothetical protein DNO_0031 [Dichelobacter nodosus VCS1703A]
 gi|166919100|sp|A5EWZ1|RIMP_DICNV RecName: Full=Ribosome maturation factor rimP
 gi|146232980|gb|ABQ13958.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
          Length = 155

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 5/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++ +++P++E M F    +       N +L+I+V+  +G + + D   +++ ++
Sbjct: 1   MSQEQVVTELLRPIVESMGFIWWGLEYHYNSMNSILRIYVDTQEGGIGIDDIVTITEQLN 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           PILDVE  I  +Y LEVSSPG+DR +   +   ++ G  V C +      K+K  G +  
Sbjct: 61  PILDVEQPITTNYTLEVSSPGLDRILFTLAQCEQFIGATVHCRLRFPFEGKRKFQGIMTA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +             ++ + F  +  AR++
Sbjct: 121 VDHDKETISLT----LADGAAEVHLPFTQIDKARIV 152


>gi|304414227|ref|ZP_07395595.1| hypothetical protein REG_1311 [Candidatus Regiella insecticola
           LSR1]
 gi|304283441|gb|EFL91837.1| hypothetical protein REG_1311 [Candidatus Regiella insecticola
           LSR1]
          Length = 154

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 70/151 (46%), Gaps = 9/151 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   ++ +  + V +  +  +   L+I+++  DG +T+  C ++S  +S +L
Sbjct: 8   LEQKLTEIISAPVKALGHKLVGVEFIPGRQSTLRIYIDNCDG-VTVDMCADVSYQVSAVL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  I   Y LEVSSPG++R +    D+  + G  +   + ++  +++K  G I     
Sbjct: 67  DVEEPITCPYNLEVSSPGLERLLFTAEDYTDYLGERINLTLRIAMQNRRKWQGIIKAVDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
               +  + + E          +  ++  A 
Sbjct: 127 EMIIVTVDGKDEV--------FALSNIRKAN 149


>gi|314937504|ref|ZP_07844837.1| UPF0090 family protein [Enterococcus faecium TX0133a04]
 gi|314942163|ref|ZP_07849017.1| UPF0090 family protein [Enterococcus faecium TX0133C]
 gi|314947497|ref|ZP_07850912.1| UPF0090 family protein [Enterococcus faecium TX0082]
 gi|314951484|ref|ZP_07854533.1| UPF0090 family protein [Enterococcus faecium TX0133A]
 gi|314992574|ref|ZP_07857992.1| UPF0090 family protein [Enterococcus faecium TX0133B]
 gi|314995491|ref|ZP_07860591.1| UPF0090 family protein [Enterococcus faecium TX0133a01]
 gi|313590325|gb|EFR69170.1| UPF0090 family protein [Enterococcus faecium TX0133a01]
 gi|313592866|gb|EFR71711.1| UPF0090 family protein [Enterococcus faecium TX0133B]
 gi|313596324|gb|EFR75169.1| UPF0090 family protein [Enterococcus faecium TX0133A]
 gi|313599086|gb|EFR77931.1| UPF0090 family protein [Enterococcus faecium TX0133C]
 gi|313643145|gb|EFS07725.1| UPF0090 family protein [Enterococcus faecium TX0133a04]
 gi|313646047|gb|EFS10627.1| UPF0090 family protein [Enterococcus faecium TX0082]
          Length = 147

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 76/150 (50%), Gaps = 8/150 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI- 85
           ++ P+++E +F  V++  ++E K+  L++F++++ G + + +C  +S+ +S  LD  +  
Sbjct: 1   MVTPILDEQNFELVEVEFVKEGKSWFLRVFIDKE-GGIDIEECAFVSEKLSEKLDAADPD 59

Query: 86  -IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPG +RP+ ++SD+ +  G  V   +      +++  G +         
Sbjct: 60  PIPQAYFLEVSSPGAERPLKKESDYEKALGDYVHVSLYQPVDGEKQYEGFLQSFDAEQLT 119

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           L    +      E ++     ++  ARL +
Sbjct: 120 L----KIRIKTREKELTFDRKNIAKARLAI 145


>gi|157962880|ref|YP_001502914.1| hypothetical protein Spea_3062 [Shewanella pealeana ATCC 700345]
 gi|189039813|sp|A8H742|RIMP_SHEPA RecName: Full=Ribosome maturation factor rimP
 gi|157847880|gb|ABV88379.1| protein of unknown function DUF150 [Shewanella pealeana ATCC
           700345]
          Length = 151

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++  +E +  +   +  ++  K+ +L+++++ + G + + DC E S+ +S +
Sbjct: 4   LERKLVEMLKAPVEALGHKLWGLEYIQAGKHSILRLYIDNEKG-IFIEDCAEASRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G + G  
Sbjct: 63  MDVEDPISTEYTLEVSSPGVDRPLFTAEQYQAYIGETVKVQLTMPVAGSRNLKGTVTGVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ ++ D++    LI
Sbjct: 123 GQMLNLSVDGN--------ELIVALDNIRKGNLI 148


>gi|21282877|ref|NP_645965.1| hypothetical protein MW1148 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49483428|ref|YP_040652.1| hypothetical protein SAR1241 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486104|ref|YP_043325.1| hypothetical protein SAS1199 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651835|ref|YP_186141.1| hypothetical protein SACOL1284 [Staphylococcus aureus subsp. aureus
           COL]
 gi|82750866|ref|YP_416607.1| hypothetical protein SAB1127 [Staphylococcus aureus RF122]
 gi|87160896|ref|YP_493855.1| hypothetical protein SAUSA300_1158 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194975|ref|YP_499775.1| hypothetical protein SAOUHSC_01242 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221387|ref|YP_001332209.1| hypothetical protein NWMN_1175 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509431|ref|YP_001575090.1| hypothetical protein USA300HOU_1197 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142499|ref|ZP_03566992.1| hypothetical protein SauraJ_12822 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253731884|ref|ZP_04866049.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257425319|ref|ZP_05601744.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427980|ref|ZP_05604378.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430613|ref|ZP_05606995.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433373|ref|ZP_05609731.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436215|ref|ZP_05612262.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|258423894|ref|ZP_05686779.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|258452564|ref|ZP_05700570.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|262048157|ref|ZP_06021044.1| hypothetical protein SAD30_1933 [Staphylococcus aureus D30]
 gi|262051327|ref|ZP_06023550.1| hypothetical protein SA930_2049 [Staphylococcus aureus 930918-3]
 gi|282903820|ref|ZP_06311708.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|282905583|ref|ZP_06313438.1| hypothetical protein SDAG_01207 [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282908558|ref|ZP_06316388.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910837|ref|ZP_06318640.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914042|ref|ZP_06321829.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282916525|ref|ZP_06324283.1| hypothetical protein SATG_00018 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282918964|ref|ZP_06326699.1| hypothetical protein SASG_00270 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282920509|ref|ZP_06328230.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282924087|ref|ZP_06331763.1| hypothetical protein SARG_01628 [Staphylococcus aureus subsp.
           aureus C101]
 gi|283770329|ref|ZP_06343221.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958008|ref|ZP_06375459.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024258|ref|ZP_06378656.1| hypothetical protein Saura13_06684 [Staphylococcus aureus subsp.
           aureus 132]
 gi|293501074|ref|ZP_06666925.1| hypothetical protein SCAG_01604 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510036|ref|ZP_06668744.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526622|ref|ZP_06671307.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294848261|ref|ZP_06789008.1| hypothetical protein SKAG_00320 [Staphylococcus aureus A9754]
 gi|295427752|ref|ZP_06820384.1| UPF0090 protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297208089|ref|ZP_06924520.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297591290|ref|ZP_06949928.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus MN8]
 gi|300912170|ref|ZP_07129613.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304381171|ref|ZP_07363824.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|34222911|sp|Q8NWZ3|RIMP_STAAW RecName: Full=Ribosome maturation factor rimP
 gi|56749717|sp|Q6G9U8|RIMP_STAAS RecName: Full=Ribosome maturation factor rimP
 gi|56749746|sp|Q6GHH0|RIMP_STAAR RecName: Full=Ribosome maturation factor rimP
 gi|81694636|sp|Q5HGG6|RIMP_STAAC RecName: Full=Ribosome maturation factor rimP
 gi|91207999|sp|Q2YXK3|RIMP_STAAB RecName: Full=Ribosome maturation factor rimP
 gi|122540592|sp|Q2G2D3|RIMP_STAA8 RecName: Full=Ribosome maturation factor rimP
 gi|123486179|sp|Q2FHH3|RIMP_STAA3 RecName: Full=Ribosome maturation factor rimP
 gi|189038628|sp|A8Z3U5|RIMP_STAAT RecName: Full=Ribosome maturation factor rimP
 gi|205405730|sp|A6QGG5|RIMP_STAAE RecName: Full=Ribosome maturation factor rimP
 gi|21204316|dbj|BAB95013.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49241557|emb|CAG40243.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244547|emb|CAG42976.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286021|gb|AAW38115.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|82656397|emb|CAI80816.1| conserved hypothetical protein [Staphylococcus aureus RF122]
 gi|87126870|gb|ABD21384.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202533|gb|ABD30343.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374187|dbj|BAF67447.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368240|gb|ABX29211.1| hypothetical protein USA300HOU_1197 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253724294|gb|EES93023.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257271776|gb|EEV03914.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274821|gb|EEV06308.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278741|gb|EEV09360.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281466|gb|EEV11603.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284497|gb|EEV14617.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257845923|gb|EEV69952.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|257859782|gb|EEV82624.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|259160702|gb|EEW45723.1| hypothetical protein SA930_2049 [Staphylococcus aureus 930918-3]
 gi|259163723|gb|EEW48278.1| hypothetical protein SAD30_1933 [Staphylococcus aureus D30]
 gi|269940756|emb|CBI49138.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282314059|gb|EFB44451.1| hypothetical protein SARG_01628 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316774|gb|EFB47148.1| hypothetical protein SASG_00270 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282319012|gb|EFB49364.1| hypothetical protein SATG_00018 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282322110|gb|EFB52434.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282325442|gb|EFB55751.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327620|gb|EFB57903.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330875|gb|EFB60389.1| hypothetical protein SDAG_01207 [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282594171|gb|EFB99158.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282595438|gb|EFC00402.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|283460476|gb|EFC07566.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
 gi|283470480|emb|CAQ49691.1| protein LMOf2365_1338 [Staphylococcus aureus subsp. aureus ST398]
 gi|283790157|gb|EFC28974.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920694|gb|EFD97757.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096079|gb|EFE26340.1| hypothetical protein SCAG_01604 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466980|gb|EFF09498.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M809]
 gi|294825061|gb|EFG41483.1| hypothetical protein SKAG_00320 [Staphylococcus aureus A9754]
 gi|295128110|gb|EFG57744.1| UPF0090 protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296887332|gb|EFH26234.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297576176|gb|EFH94892.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus MN8]
 gi|298694557|gb|ADI97779.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300886416|gb|EFK81618.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|302332871|gb|ADL23064.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751088|gb|ADL65265.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340154|gb|EFM06095.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312438355|gb|ADQ77426.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315194153|gb|EFU24546.1| hypothetical protein CGSSa00_05608 [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315198507|gb|EFU28836.1| hypothetical protein CGSSa01_02741 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140918|gb|EFW32765.1| hypothetical protein HMPREF9528_00535 [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144366|gb|EFW36132.1| hypothetical protein HMPREF9529_00249 [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323441045|gb|EGA98752.1| hypothetical protein SAO11_0112 [Staphylococcus aureus O11]
 gi|323443914|gb|EGB01525.1| hypothetical protein SAO46_0024 [Staphylococcus aureus O46]
 gi|329313935|gb|AEB88348.1| Ribosome maturation factor rimP [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727856|gb|EGG64307.1| hypothetical protein SA21189_0300 [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329733678|gb|EGG70006.1| hypothetical protein SA21193_0242 [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 155

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 77/155 (49%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E+++F  V +  ++E ++  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   ITEQVEVIVKPIMEDLNFELVDVEYVKEGRDHFLRISIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+ ++ DF       V   + +    +++ +G +   +
Sbjct: 63  MDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQEVN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                ++ + +         I I  D +  AR  V
Sbjct: 123 NETIVVQVKIKARTK----DIEIPRDKIAKARHAV 153


>gi|302387321|ref|YP_003823143.1| protein of unknown function DUF150 [Clostridium saccharolyticum
           WM1]
 gi|302197949|gb|ADL05520.1| protein of unknown function DUF150 [Clostridium saccharolyticum
           WM1]
          Length = 155

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                  + P+++E  F  V +  ++E     L+ +++++ G +T+ DCE +S+ +   L
Sbjct: 8   EAKTEGFLLPLMKENHFELVDVEYVKEAGSWYLRAYIDKE-GGITVDDCETISRRLGDWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I   Y LEVSSPG+ RP+ +  DF R  G  V  ++      ++   G +     
Sbjct: 67  DEKDFIADSYILEVSSPGLGRPLKKDKDFNRSIGKEVDIKLYKPLNKQKDFTGTLTSYDR 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               + +E   E  +N  +IA+
Sbjct: 127 ETVTITQEDGIELVLNRPEIAL 148


>gi|328957407|ref|YP_004374793.1| hypothetical protein CAR_c10840 [Carnobacterium sp. 17-4]
 gi|328673731|gb|AEB29777.1| hypothetical protein CAR_c10840 [Carnobacterium sp. 17-4]
          Length = 154

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 8/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ +++P++E   F    I  ++E KN  L++++++ +G + L DC  +S+ IS  
Sbjct: 1   MVETVTEIVKPIVERNQFELEDIEFIKEGKNWFLRVYIDKPEG-IDLEDCALVSEQISEH 59

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +D    + I   Y LEVSSPG +RP+ ++ D++   G  +   +      ++   G +  
Sbjct: 60  MDKINPDPIPQAYFLEVSSPGAERPLKKEEDYVNAVGEYIHISLYEPVDGEKVYEGTLKE 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            ++    L    +         I  S  ++  AR
Sbjct: 120 VNDETLTLTIRVKTRVK----DIEFSRKTIAKAR 149


>gi|254295402|ref|YP_003061425.1| hypothetical protein Hbal_3060 [Hirschia baltica ATCC 49814]
 gi|254043933|gb|ACT60728.1| protein of unknown function DUF150 [Hirschia baltica ATCC 49814]
          Length = 203

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 7/169 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   I  +I+P    +    V++ ++     +LQI  E+ DG M + DC +LS+AI P+L
Sbjct: 7   IEKRILDIIEPEATSIGLEIVRVRMMGANTPILQIMAEKPDGTMDVEDCAKLSRAIGPVL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPGIDRP+ R+ DF  W  + V  E+ +    +++  G I     
Sbjct: 67  DVEDPIHSEYNLEVSSPGIDRPLTREGDFANWKTYEVRIELGIPIDGRRRFHGTITDEVN 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
               L+ +   +         IS   ++ A L++ D L+  + +   + 
Sbjct: 127 GIVSLDLKDGSKA-------EISIVDMVKASLVMNDRLIEEAQSRGQAP 168


>gi|126698904|ref|YP_001087801.1| hypothetical protein CD1306 [Clostridium difficile 630]
 gi|254974852|ref|ZP_05271324.1| hypothetical protein CdifQC_06040 [Clostridium difficile QCD-66c26]
 gi|255092239|ref|ZP_05321717.1| hypothetical protein CdifC_06222 [Clostridium difficile CIP 107932]
 gi|255100325|ref|ZP_05329302.1| hypothetical protein CdifQCD-6_05917 [Clostridium difficile
           QCD-63q42]
 gi|255306263|ref|ZP_05350435.1| hypothetical protein CdifA_06705 [Clostridium difficile ATCC 43255]
 gi|255313979|ref|ZP_05355562.1| hypothetical protein CdifQCD-7_06500 [Clostridium difficile
           QCD-76w55]
 gi|255516659|ref|ZP_05384335.1| hypothetical protein CdifQCD-_06064 [Clostridium difficile
           QCD-97b34]
 gi|255649758|ref|ZP_05396660.1| hypothetical protein CdifQCD_06184 [Clostridium difficile
           QCD-37x79]
 gi|260682914|ref|YP_003214199.1| hypothetical protein CD196_1169 [Clostridium difficile CD196]
 gi|260686512|ref|YP_003217645.1| hypothetical protein CDR20291_1147 [Clostridium difficile R20291]
 gi|306519863|ref|ZP_07406210.1| hypothetical protein CdifQ_07217 [Clostridium difficile QCD-32g58]
 gi|123363595|sp|Q18BH3|RIMP_CLOD6 RecName: Full=Ribosome maturation factor rimP
 gi|115250341|emb|CAJ68163.1| conserved hypothetical protein [Clostridium difficile]
 gi|260209077|emb|CBA62221.1| conserved hypothetical protein [Clostridium difficile CD196]
 gi|260212528|emb|CBE03478.1| conserved hypothetical protein [Clostridium difficile R20291]
          Length = 153

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 82/150 (54%), Gaps = 2/150 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   I  ++  + +E  F  V +  ++E     L++++++++G ++L +CE +S+ +SP
Sbjct: 4   NLEATIEEIVTKITDEHGFEMVDVEYVKEAGEYYLRVYIDKEEG-ISLNECELVSRELSP 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD ++ I+ +Y LEVSSPG+DR + +  DF+R+ G  V  ++       ++  G+++G 
Sbjct: 63  ILDEKDPIKENYFLEVSSPGLDRALKKDRDFVRYQGRDVDLKLYKPLNGCKQFEGELVGL 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           +E           E + N   +AI   ++ 
Sbjct: 123 TEDNNIKIIANGKEMEFNRKDVAIVRLAIK 152


>gi|199597101|ref|ZP_03210533.1| hypothetical protein LRH_07196 [Lactobacillus rhamnosus HN001]
 gi|258508611|ref|YP_003171362.1| hypothetical protein LGG_01616 [Lactobacillus rhamnosus GG]
 gi|258539790|ref|YP_003174289.1| hypothetical protein LC705_01599 [Lactobacillus rhamnosus Lc 705]
 gi|199591905|gb|EDY99979.1| hypothetical protein LRH_07196 [Lactobacillus rhamnosus HN001]
 gi|257148538|emb|CAR87511.1| Conserved hypotehtical protein [Lactobacillus rhamnosus GG]
 gi|257151466|emb|CAR90438.1| Conserved hypotehtical protein [Lactobacillus rhamnosus Lc 705]
 gi|259649918|dbj|BAI42080.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 159

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++++++P++++  F    +  ++E     L++++++  G +TL +C  +S+A+S 
Sbjct: 5   SVVETVTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDKP-GGITLDECVLVSEALSE 63

Query: 79  ILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ R++D+ +  G  +   +      K+   G + 
Sbjct: 64  QLDAINPDPIPQQYFLEVSSPGAERPLKRETDYEQAIGDYIHVSLFKKLDGKKVFEGTLK 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   L  + +  K        I    + SARL +
Sbjct: 124 DLKPDQLTLTVKDKSRKFDQ----VIDRKLIASARLAI 157


>gi|332532409|ref|ZP_08408287.1| NusA-like protein [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038052|gb|EGI74499.1| NusA-like protein [Pseudoalteromonas haloplanktis ANT/505]
          Length = 151

 Score =  160 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L  D+ +++ P +E + F    +  ++  ++  L++++  +DG +++ +C + S+ IS
Sbjct: 2   TKLEQDLVTMLTPAVEMLGFELHGLEFVQAGRHSTLRVYIAHEDG-ISVDNCADASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I   Y LEVSSPG+DR + ++  + +  G  V     L    ++   G ++ 
Sbjct: 61  AILDVEDPITNEYDLEVSSPGVDRLLFKQDHYEQAQGEEVRVRTKLPQDGRRNFKGDLVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            S     L  +          +  I   ++  A LI
Sbjct: 121 VSSDMITLSSDG--------AEHLIMLSNIERANLI 148


>gi|259586210|sp|B8CKH1|RIMP_SHEPW RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  160 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++  +E +      +  ++  K+ +L+++++ + G + + DC E S+ +S +
Sbjct: 4   LERKLVEMLKAPVEALGHELWGLEYIQAGKHSILRLYIDNEKG-IFIEDCAETSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G ++G  
Sbjct: 63  MDVEDPISTEYTLEVSSPGVDRPLFTAEQYQLYIGETVKVQVTMPVAGSRNLKGTVIGIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQMLTLSVDGN--------ELIIALDNIRKGNLI 148


>gi|18310672|ref|NP_562606.1| hypothetical protein CPE1690 [Clostridium perfringens str. 13]
 gi|110799296|ref|YP_696377.1| hypothetical protein CPF_1944 [Clostridium perfringens ATCC 13124]
 gi|168211422|ref|ZP_02637047.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|168214477|ref|ZP_02640102.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
 gi|168216977|ref|ZP_02642602.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
 gi|182626379|ref|ZP_02954133.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|34223128|sp|Q8XJR4|RIMP_CLOPE RecName: Full=Ribosome maturation factor rimP
 gi|122958819|sp|Q0TPR3|RIMP_CLOP1 RecName: Full=Ribosome maturation factor rimP
 gi|18145353|dbj|BAB81396.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|110673943|gb|ABG82930.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
 gi|170710586|gb|EDT22768.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|170714055|gb|EDT26237.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
 gi|177908330|gb|EDT70878.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|182380875|gb|EDT78354.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
          Length = 154

 Score =  160 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+ ++  P+++E  +    I  ++E N   L++++E+ +  ++LRDCE +S+A+S +
Sbjct: 6   LVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSRALSDM 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E+ I+  Y LEVSSPG++R +     F R+ G  V      S   ++ + G +    
Sbjct: 66  LDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEVFVGFKSSLSGRKNVKGILKDVQ 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    +E E          +I +  D + +A L
Sbjct: 126 ENEIIVECEGN--------EIKVPKDKIKTANL 150


>gi|326791501|ref|YP_004309322.1| hypothetical protein Clole_2418 [Clostridium lentocellum DSM 5427]
 gi|326542265|gb|ADZ84124.1| protein of unknown function DUF150 [Clostridium lentocellum DSM
           5427]
          Length = 153

 Score =  160 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 84/161 (52%), Gaps = 10/161 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQ 74
                L   I   + P++ E+ +  V +  ++E  N  L+I+++++ G +T++DC+  S+
Sbjct: 1   MNKKELIEVIEGYLDPILAELHYELVDVEYVKEGPNYYLRIYIDKE-GGITIQDCQLTSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AI  +LD ++ I+  Y LEVSSPG+DR + +  +F R+ G +V  ++  +   ++   G+
Sbjct: 60  AIEKVLDEKDPIKDPYVLEVSSPGLDRVLKKDKEFERFKGRLVDVKLYEAINKQKHFTGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           ++  +E   +++ E           +     ++   RL +T
Sbjct: 120 LIKKTEDKLYIDDEG--------TNLEFEMKNVAVVRLAIT 152


>gi|285017806|ref|YP_003375517.1| hypothetical protein XALc_1014 [Xanthomonas albilineans GPE PC73]
 gi|283473024|emb|CBA15529.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 201

 Score =  160 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN-----MTLRDCEELSQA 75
           A +I++++ P ++ +    +    L       L+++++   G      + + DCE +S+ 
Sbjct: 5   ANEIANLLGPTVDALGLELLGAEYLPASGGATLRLYIDVPLGEQPERMVNIDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R         + L    +++L G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTAEQFARHRDESAKVVLKLPQQGRRRLQGRI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +             R   +++  ++ + FD++  AR+
Sbjct: 125 VQVELDA------GRIVFEVDGAELTVDFDNIDKARI 155


>gi|312134895|ref|YP_004002233.1| hypothetical protein Calow_0865 [Caldicellulosiruptor owensensis
           OL]
 gi|311774946|gb|ADQ04433.1| protein of unknown function DUF150 [Caldicellulosiruptor owensensis
           OL]
          Length = 151

 Score =  160 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 81/155 (52%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P++E   F  V I   +E K+  L++++++  G +T+ DC+ +S+ +S  
Sbjct: 4   ITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELSER 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ + I   Y LEVSSPG+DRP+V   DF+R  G +V   +     ++ K  G+++  +
Sbjct: 63  LDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGRLVEVFLSQPFLNRTKFTGELVEKN 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    L  +K          I I  + +   ++ +
Sbjct: 123 DKFLVLIMDKEK--------IDIPIEKVKKVKIAI 149


>gi|270290315|ref|ZP_06196540.1| hypothetical protein HMPREF9024_00500 [Pediococcus acidilactici
           7_4]
 gi|270281096|gb|EFA26929.1| hypothetical protein HMPREF9024_00500 [Pediococcus acidilactici
           7_4]
          Length = 158

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 74/158 (46%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I+ + +PVIE   F+ V++  ++E     L+ ++++  G + + +C  +S  +S 
Sbjct: 4   NVVEKITELARPVIESHDFQLVEVEFVKEGQGWFLRFYIDKV-GGINIEECAMVSDELSE 62

Query: 79  ILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           +LD ++   I   Y LEVSSPG +RP+  K D     G  +   +  S   ++   G + 
Sbjct: 63  LLDQQDPDPIPQAYFLEVSSPGAERPLKTKEDLAAAVGEYIHISLYASINKQKVFEGYLK 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   L+   +        ++ ++++ +  ARL +
Sbjct: 123 SFENDELVLDYLDKTRHK----ELKVAYNQVAFARLAI 156


>gi|217970107|ref|YP_002355341.1| hypothetical protein Tmz1t_1690 [Thauera sp. MZ1T]
 gi|217507434|gb|ACK54445.1| protein of unknown function DUF150 [Thauera sp. MZ1T]
          Length = 144

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 12/153 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  D+  +I+ V+  + +  V I     K  LL++F++ + G +T+ DC  +S  +  + 
Sbjct: 1   MRADVEGLIEQVVTGLGYELVDIEFSP-KGRLLRVFLDIERG-ITVDDCATVSNQLQRVF 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VEN+   + RLEVSSPG+DRP+ + +DF R+ G      + L  G+++  +G I    +
Sbjct: 59  EVENV--DYDRLEVSSPGLDRPLKKLADFERFAGEQAQVRLSLPIGNQRNFVGVIERVQD 116

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               L  EK         ++ + FD +  ARL+
Sbjct: 117 GAVALRTEKG--------EVLLPFDDIEKARLV 141


>gi|160880909|ref|YP_001559877.1| hypothetical protein Cphy_2778 [Clostridium phytofermentans ISDg]
 gi|226701647|sp|A9KNW8|RIMP_CLOPH RecName: Full=Ribosome maturation factor rimP
 gi|160429575|gb|ABX43138.1| protein of unknown function DUF150 [Clostridium phytofermentans
           ISDg]
          Length = 155

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
             ++ P++EE +F  V +  ++E  N  L+ +++++ G +T+ DCE +S+  S +LD ++
Sbjct: 12  EQLLTPIMEENNFELVDVEYVKEVGNWYLRAYIDKE-GGITVDDCEVVSRRFSDLLDEKD 70

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPG+ R + +  DF R  G  V  ++  +   ++   G +    +    
Sbjct: 71  FIPDAYILEVSSPGLGRQLKKDKDFKRSLGEEVEIKLYKAINKQKDFEGILTDFDQEKLI 130

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +E+        +   +  +   +   RL +
Sbjct: 131 IEQ-------ADGTTMEFARADIAMVRLAL 153


>gi|197106903|ref|YP_002132280.1| hypothetical protein PHZ_c3442 [Phenylobacterium zucineum HLK1]
 gi|259586178|sp|B4RC58|RIMP_PHEZH RecName: Full=Ribosome maturation factor rimP
 gi|196480323|gb|ACG79851.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 187

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 14/167 (8%)

Query: 31  PVIEEMSFRSVQISLLEEKN--LLLQIFVERD------DGNMTLRDCEELSQAISPILDV 82
           PV E + +  V++ L+  +     LQI  ER        G+M + DC +LS+A+S +LD 
Sbjct: 17  PVAEAVGYEIVRLRLMGGERNQRRLQIMAERPLLEDGTGGDMNVEDCAKLSRAVSEVLDA 76

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I G Y LEVSSPG+DRP+ R  DF  + G+    E+   +  +++  G + G     
Sbjct: 77  ADPISGEYTLEVSSPGVDRPLTRLKDFDTYEGYEARLELDRLAEGRKRFRGVLAGVEGDQ 136

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
             ++ E        E    + F  ++ A+L++TDEL++       + 
Sbjct: 137 VAIDLEGE------EETALVPFAWIVEAKLVLTDELMKRGAQTRAAR 177


>gi|37523057|ref|NP_926434.1| hypothetical protein glr3488 [Gloeobacter violaceus PCC 7421]
 gi|35214060|dbj|BAC91429.1| glr3488 [Gloeobacter violaceus PCC 7421]
          Length = 182

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 13/170 (7%)

Query: 9   SKYEPRIFGDMG---LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNM 64
           S +E   F  M    +   ++++ +PV E++  + V ++     K   L++ +       
Sbjct: 17  SGFEAHFFDGMNPRDIVEQVTALAEPVAEQLGLQLVAVAYQTHTKPATLRVDIRHPTEGT 76

Query: 65  TLRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
            L DCE++S+A+  +LD  +++I G Y LEVSSPG++R +    +F+ + G  V  +   
Sbjct: 77  GLDDCEKMSRALEALLDTRDDLIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFG 136

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K++  G+++       +L    R        ++A+    +   +L+
Sbjct: 137 PVDGKKQWEGRLLERDGENVYLTIAGR--------RVALPRPQVARVQLV 178


>gi|323485569|ref|ZP_08090914.1| hypothetical protein HMPREF9474_02665 [Clostridium symbiosum
           WAL-14163]
 gi|323692917|ref|ZP_08107140.1| ribosome maturation factor rimP [Clostridium symbiosum WAL-14673]
 gi|323401108|gb|EGA93461.1| hypothetical protein HMPREF9474_02665 [Clostridium symbiosum
           WAL-14163]
 gi|323503024|gb|EGB18863.1| ribosome maturation factor rimP [Clostridium symbiosum WAL-14673]
          Length = 155

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + + + PV+EE  F  V +  + E     L+ +++++ G + + DCE +S+ +   L
Sbjct: 8   EAKVEAWLLPVLEEHHFELVDVEYVREVGVWYLRAYIDKE-GGIAVDDCEIISRKLGEWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G +     
Sbjct: 67  DKEDFIDDSYILEVSSPGLGRPLKKEKDFVRSMGKDVEVRLYKPLNKQKEYTGALKSYDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   +    +  IA+
Sbjct: 127 DTVTITLEDGNDLIFAKADIAL 148


>gi|309389229|gb|ADO77109.1| protein of unknown function DUF150 [Halanaerobium praevalens DSM
           2228]
          Length = 155

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 83/153 (54%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  ++  + P+ +  +   + +  L+E  + +L+IF+E  +G +T+ +CE++S+++S I
Sbjct: 7   VAETVTDFVLPIAQSENLNLIDVEFLKEGSDWILRIFLENKNGELTIEECEKVSRSLSMI 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ I+  Y LEVSSPG++RP+  + DF R+ G ++A +       +++ +G +   +
Sbjct: 67  LDEEDPIDKSYILEVSSPGLERPLKTEEDFERFKGELIAVKTFKKIEGQKEFVGILKDFN 126

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                LE +           + I +  +  A L
Sbjct: 127 VDKITLEIDNNK--------LEIDYSLVARANL 151


>gi|308272454|emb|CBX29058.1| Ribosome maturation factor rimP [uncultured Desulfobacterium sp.]
          Length = 194

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I      + E      V I    E    +++++V++  G +TL+DC  +S  +S I
Sbjct: 42  LIAKIKEFADTICESKGIELVHIEYQRETGGRVIRLYVDK-QGGVTLKDCAWVSHQLSDI 100

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+    +  Y LEVSSPG +RP+ +  DF R+ G+      ++    ++   G ++G +
Sbjct: 101 LDINLDTDWPYSLEVSSPGANRPLGKPEDFKRFKGNTATVRTIVPVEGQKNFKGVLLGFN 160

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    L         +N+  +AIS+  +  ARL
Sbjct: 161 DGFVKL--------KINDKMVAISYKEIAKARL 185


>gi|166030877|ref|ZP_02233706.1| hypothetical protein DORFOR_00557 [Dorea formicigenerans ATCC
           27755]
 gi|166029144|gb|EDR47901.1| hypothetical protein DORFOR_00557 [Dorea formicigenerans ATCC
           27755]
          Length = 157

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 4/144 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++EE+ F  V +  ++E +   L+ ++++  G +T+ DCE +S+ +S IL
Sbjct: 8   EQKTEEILNPIMEELEFELVDVEYVKEGSMWYLRAYIDKP-GGITVNDCEAVSRRLSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS- 139
           D ++ IE  Y LEVSSPG+ RP+ ++ D+ R  G  V          K++  G +     
Sbjct: 67  DEKDFIEDSYVLEVSSPGLGRPLKKEKDYKRNLGKEVEIRTYRMVDKKKEFTGLLDSYDY 126

Query: 140 -ETGFFLEKEKRGEKDMNELQIAI 162
                 +E E    K   +  IA+
Sbjct: 127 EAGTVTIELEDGTMKTFEKGDIAL 150


>gi|118579396|ref|YP_900646.1| hypothetical protein Ppro_0960 [Pelobacter propionicus DSM 2379]
 gi|259586175|sp|A1AML8|RIMP_PELPD RecName: Full=Ribosome maturation factor rimP
 gi|118502106|gb|ABK98588.1| protein of unknown function DUF150 [Pelobacter propionicus DSM
           2379]
          Length = 161

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 84/159 (52%), Gaps = 14/159 (8%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I ++  PVI+ M+   V++      +  +L++F++++ G +TL DC +LS+ +S 
Sbjct: 7   DICDRIRTLALPVIDSMNLELVEVEYKRSGREAVLRLFIDKE-GGVTLDDCADLSRELST 65

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQKLIG 133
           +LDVE++I   Y LEVSSPG+DRP+  ++D+ R++G ++         D     ++  +G
Sbjct: 66  LLDVEDLIPCEYSLEVSSPGLDRPLKSEADYERFSGRLIKVRTYEPYQDDAGNRRKTFLG 125

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++ G  +    +   +           +I  + +  A+L
Sbjct: 126 RLEGLKDGSVVMSLTE-------GQTASIPLERIAKAQL 157


>gi|239626255|ref|ZP_04669286.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520485|gb|EEQ60351.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 155

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +   + P++EE  F  V +  ++E     L+ +++++ G + + DCE +S+ +   L
Sbjct: 8   ESRVERYLLPLMEEHHFELVDVEYVKEAGTWYLRAYIDKE-GGIAVDDCEVISRKLGDWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G +     
Sbjct: 67  DKEDFIDESYILEVSSPGLGRPLKKEKDFIRSMGKDVDVRLYRQIDKQKEFTGALSAYDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               L  E   +    +  IA+
Sbjct: 127 NTVTLTMEDGSQMVFEKPDIAL 148


>gi|317133696|ref|YP_004093010.1| protein of unknown function DUF150 [Ethanoligenens harbinense
           YUAN-3]
 gi|315471675|gb|ADU28279.1| protein of unknown function DUF150 [Ethanoligenens harbinense
           YUAN-3]
          Length = 165

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 3/137 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELS 73
           +     +   + ++  PV E +      I  ++E  +  L+I++++ DG + + DCE  S
Sbjct: 1   MAAGKSVVSRVEALALPVAETLGLSIWDIEYVKEGASWFLRIYIDK-DGGVGIEDCEAFS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLI 132
           +AI   LD  ++I   Y LEVSSPGI+R + R + F  + G  V   ++      ++++ 
Sbjct: 60  RAIDGPLDEADLIPQQYYLEVSSPGIERELKRDAHFQAFIGKKVHVRLIRPLEDGRREVN 119

Query: 133 GKIMGTSETGFFLEKEK 149
           G +   ++    LE  +
Sbjct: 120 GTLTAFADGTLTLETPE 136


>gi|110801637|ref|YP_698977.1| hypothetical protein CPR_1662 [Clostridium perfringens SM101]
 gi|123341718|sp|Q0SSD0|RIMP_CLOPS RecName: Full=Ribosome maturation factor rimP
 gi|110682138|gb|ABG85508.1| conserved hypothetical protein [Clostridium perfringens SM101]
          Length = 154

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+ ++  P+++E  +    I  ++E N   L++++E+ +  ++LRDCE +S+A+S +
Sbjct: 6   LVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSRALSDM 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E+ I+  Y LEVSSPG++R +     F R+ G  +      S   ++ + G +    
Sbjct: 66  LDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEIFVGFKSSLSGRKNVKGILKDVQ 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    +E E          +I +  D + +A L
Sbjct: 126 ENEIIVECEGN--------EIKVPKDKIKTANL 150


>gi|197117687|ref|YP_002138114.1| hypothetical protein Gbem_1299 [Geobacter bemidjiensis Bem]
 gi|226695910|sp|B5EI54|RIMP_GEOBB RecName: Full=Ribosome maturation factor rimP
 gi|197087047|gb|ACH38318.1| protein of unknown function DUF150 [Geobacter bemidjiensis Bem]
          Length = 160

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 82/163 (50%), Gaps = 13/163 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ +I  V   +    V +    E +++++++F+E+ +G + L DC ++S+
Sbjct: 1   MAKVDVVERVTEIIAEVGAPLGIELVDLEYKREGRDMVVRVFLEKREGGINLDDCADVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
            +S ILDVE+ +   Y LEVSSPGI RP+ + +D+ R+ GH++  +      D     ++
Sbjct: 61  QLSDILDVEDFMPERYTLEVSSPGICRPLKKVADYERFLGHLIKVKTFEMLADEAGNKRK 120

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              GK+ G ++    ++  +  +         +  D +  A L
Sbjct: 121 TFTGKLTGIADGVIGIDLTEGQKA-------RVPLDKVAKANL 156


>gi|39996685|ref|NP_952636.1| hypothetical protein GSU1585 [Geobacter sulfurreducens PCA]
 gi|81702398|sp|Q74CT6|RIMP_GEOSL RecName: Full=Ribosome maturation factor rimP
 gi|39983566|gb|AAR34959.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298505696|gb|ADI84419.1| protein of unknown function DUF150 [Geobacter sulfurreducens KN400]
          Length = 159

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 14/163 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                +AG I++V + V+       V++    E   ++L++FV++  G ++L DC  +S+
Sbjct: 1   MQKDDVAGRITAVAEQVLTPQGLELVEVEYKREGRQMVLRLFVDKP-GGISLDDCAAVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
            +S ILDVE+ I  +Y LEVSSPG++RP+ +++D+ R+ G +V         D     ++
Sbjct: 60  ELSEILDVEDFIRENYTLEVSSPGLNRPLKKEADYERYAGRLVKVRTFELLADEEGNRRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +G ++G S+    L                I  D +  A L
Sbjct: 120 TFLGDLVGLSDGVVTLTL-------REGQLARIPLDKIAKANL 155


>gi|87119793|ref|ZP_01075690.1| hypothetical protein MED121_07630 [Marinomonas sp. MED121]
 gi|86165269|gb|EAQ66537.1| hypothetical protein MED121_07630 [Marinomonas sp. MED121]
          Length = 153

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           +   I+PV+E + +R   +  + + K+ +L++F+E D +    + DC ++S+ +S ILDV
Sbjct: 8   LEGHIRPVVEGLGYRFWGLEYISQGKDSVLRVFIESDSENGTDIEDCAKVSRQVSSILDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G Y LEVSSPG+DRP+   + F  + G +V+  + +    ++K  G++       
Sbjct: 68  EDPITGEYNLEVSSPGLDRPLFELAQFEEYIGAIVSLRLRVPFDGRRKFKGQLTAVEGED 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             L  ++         +  +  D +  A ++
Sbjct: 128 VVLRVDQE--------EYLLPIDLIDKANVV 150


>gi|163752375|ref|ZP_02159570.1| hypothetical protein KT99_00518 [Shewanella benthica KT99]
 gi|161327747|gb|EDP98934.1| hypothetical protein KT99_00518 [Shewanella benthica KT99]
          Length = 151

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++   +E +  R   +  ++  K+ +L+++++ D+G + + DC E S+ IS +
Sbjct: 4   IEKKLEEMLSSPVEALGHRLWGLEYIQAGKHSILRVYIDNDNG-IFIEDCAETSRQISAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   + LEVSSPG+DRP+     +  +    V  ++ +  G  + L G ++G  
Sbjct: 63  LDVEDPISTEFTLEVSSPGVDRPLFSAEQYGSYIDETVKIQLTMPVGGSRNLKGTVIGVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQTLTLSVDGN--------ELIIALDNIRRGNLI 148


>gi|288817342|ref|YP_003431689.1| hypothetical protein HTH_0021 [Hydrogenobacter thermophilus TK-6]
 gi|288786741|dbj|BAI68488.1| hypothetical protein HTH_0021 [Hydrogenobacter thermophilus TK-6]
 gi|308750949|gb|ADO44432.1| protein of unknown function DUF150 [Hydrogenobacter thermophilus
           TK-6]
          Length = 157

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 7/157 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
             +  +   +  + +P+I+ + F+   +    E+  +L++ +++ DG +T+ DCEE+S+ 
Sbjct: 3   INEKSIVEKVRQLAEPIIKNLGFKLFDVEFKPERGWVLRVILDK-DGGITVNDCEEVSKR 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+II   Y LEVSSPG+ R + +   +  + G ++   +  +   K++L G I
Sbjct: 62  LSALLDVEDIIPTSYILEVSSPGLTRELTKPEHYEFFKGRLIRLVLREALEGKRELKGYI 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +   E    L ++  G+              +  A L
Sbjct: 122 VDVKEGILQLREKDSGKM------FHTPLSIVARAHL 152


>gi|292669519|ref|ZP_06602945.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292648842|gb|EFF66814.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 163

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 13/163 (7%)

Query: 11  YEPRIFGDMGLAGDISSVIQPV-IEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDC 69
           YE R      +   +  + + + ++      V +  + E++  L+I+++++ G + + DC
Sbjct: 9   YEKRESMSAKIEERVEEIARGLLVDAPELELVDVEYVRERDWYLRIYIDKE-GGIDIEDC 67

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + LS+ +  +LD E+ I   Y LEVSSPG+DR + +  DF R  G  V   +      K+
Sbjct: 68  QGLSERLEEMLDREDFIPDAYILEVSSPGLDRVLRKPRDFEREQGKAVDVTLYAPFEGKK 127

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +  G + G       L+             I I  D +   RL
Sbjct: 128 QWTGTLAGYDGEMLTLDDG-----------IRIPLDQISQIRL 159


>gi|255655318|ref|ZP_05400727.1| hypothetical protein CdifQCD-2_06375 [Clostridium difficile
           QCD-23m63]
 gi|296451303|ref|ZP_06893043.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP08]
 gi|296880345|ref|ZP_06904308.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP07]
 gi|296259909|gb|EFH06764.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP08]
 gi|296428586|gb|EFH14470.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP07]
          Length = 153

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 82/150 (54%), Gaps = 2/150 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   I  ++  + +E  F  V +  ++E     L++++++++G ++L +CE +S+ +SP
Sbjct: 4   NLEATIEEIVTKITDEHGFEMVDVEYVKEAGEYYLRVYIDKEEG-ISLNECELVSRELSP 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD ++ I+ +Y LEVSSPG+DR + +  DF+R+ G  V  ++       ++  G+++G 
Sbjct: 63  ILDEKDPIKENYFLEVSSPGLDRALKKDRDFVRYQGRDVDLKLYKPLNGCKQFEGELVGL 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           +E           E + N   +AI   ++ 
Sbjct: 123 TEDNNIKIIVNGKEIEFNRKDVAIVRLAIK 152


>gi|284048696|ref|YP_003399035.1| protein of unknown function DUF150 [Acidaminococcus fermentans DSM
           20731]
 gi|283952917|gb|ADB47720.1| protein of unknown function DUF150 [Acidaminococcus fermentans DSM
           20731]
          Length = 153

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 1/141 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   ++ +  P++EE     V +  + E++  L++F+++  G + + DC  +S A++  L
Sbjct: 6   ITERVTDLAAPIVEEAGLELVDVEYVRERDWFLRVFIDKA-GGIDIDDCSAVSNALAKKL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y LEVSSPGIDRP+ +  D     G  V          K++L   +     
Sbjct: 65  DEEDFIKEKYYLEVSSPGIDRPLKKDKDLEAHYGQKVDLAFFAPYEGKKQLTAVLKSHDA 124

Query: 141 TGFFLEKEKRGEKDMNELQIA 161
               LE  K+ +  +    IA
Sbjct: 125 EKLVLEDAKKKKLAIERKLIA 145


>gi|323705404|ref|ZP_08116979.1| protein of unknown function DUF150 [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535306|gb|EGB25082.1| protein of unknown function DUF150 [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 151

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 3/137 (2%)

Query: 19  MGLAGDIS-SVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           M    +++  ++ P IE+  F  V +   +E N   L++++++ DG ++L DC+ +S+ +
Sbjct: 1   MSKIEELTRQLVTPAIEKNKFELVDVEYKKEGNNWYLRVYIDK-DGGVSLDDCQIISEYL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + I+  Y LEVSSPGIDRP+  K DF ++ G +V   +      K+K  G+++
Sbjct: 60  SEKLDEVDPIDNSYILEVSSPGIDRPLKTKRDFEKFKGSLVEVSLYQPIDKKKKYEGELL 119

Query: 137 GTSETGFFLEKEKRGEK 153
           G  +    +  +    +
Sbjct: 120 GLEDDKVIIVDDGGKRE 136


>gi|315641144|ref|ZP_07896223.1| protein of hypothetical function DUF150 [Enterococcus italicus DSM
           15952]
 gi|315483152|gb|EFU73669.1| protein of hypothetical function DUF150 [Enterococcus italicus DSM
           15952]
          Length = 154

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 75/157 (47%), Gaps = 8/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++ P+++   F  V++  ++E K+  L++F+++++G + + +C  +S+ +S  
Sbjct: 1   MVQTVTDLVVPILDSKHFELVEVEFVKEGKSWFLRVFIDKEEG-IDIEECAWVSEMLSEK 59

Query: 80  LDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD  +   I   Y LE+SSPG +RP+ ++ D+ +  G  V   +  +   +++  G +  
Sbjct: 60  LDSIDPDPIPQAYFLEISSPGAERPLKKEKDYEKAVGSFVHLSLYQAVDGEKQYEGILDA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  L    +               ++  ARL +
Sbjct: 120 VEAETLTLTYRIKTRTKTQ----TFERKNIAKARLAI 152


>gi|225374839|ref|ZP_03752060.1| hypothetical protein ROSEINA2194_00460 [Roseburia inulinivorans DSM
           16841]
 gi|225213300|gb|EEG95654.1| hypothetical protein ROSEINA2194_00460 [Roseburia inulinivorans DSM
           16841]
          Length = 162

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 75/142 (52%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P+++  +F  V +  ++E +   L+++++++ G +T  DC ++S+ ++ IL
Sbjct: 15  EARTEELITPILDRRNFELVDVEYVKEGSTWYLRVYIDKE-GGITSDDCADVSREMNEIL 73

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ +EG Y  EVSSPG+ RP+ ++ D++R  G  +      +   +++  G +     
Sbjct: 74  DREDYVEGSYTFEVSSPGLGRPLKKEKDYIRSMGKELEIRTYRAIDREKEFYGILKAYDA 133

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E+E   E    +  IA+
Sbjct: 134 DTVTIEQEDGKEMVFEKSNIAL 155


>gi|283797336|ref|ZP_06346489.1| hypothetical protein CLOM621_07330 [Clostridium sp. M62/1]
 gi|291075008|gb|EFE12372.1| hypothetical protein CLOM621_07330 [Clostridium sp. M62/1]
 gi|295090488|emb|CBK76595.1| Uncharacterized protein conserved in bacteria [Clostridium cf.
           saccharolyticum K10]
          Length = 155

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + + + P++E+  F  V +  + E     L+ +++++ G +T+ DCE +S+ +   L
Sbjct: 8   ESKVEAWLLPLLEKYKFELVDVEYVREAGLWYLRAYIDKE-GGITVDDCEVVSRELGDWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I   Y LEVSSPG+ RP+ ++ DF R  G  V   +      +++  G +     
Sbjct: 67  DKEDFIADSYILEVSSPGLGRPLKKEKDFARSLGKAVEVRLYRPINRQKEFTGALKAYDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               L  E   E  + +  IA+
Sbjct: 127 DTVTLSMEDESELVLEKSDIAL 148


>gi|291536068|emb|CBL09180.1| Uncharacterized protein conserved in bacteria [Roseburia
           intestinalis M50/1]
 gi|291538563|emb|CBL11674.1| Uncharacterized protein conserved in bacteria [Roseburia
           intestinalis XB6B4]
          Length = 155

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 74/142 (52%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P+++ M+F  V +  ++E     L+ +++++ G +T+ DCE +++ ++ IL
Sbjct: 8   ETRTEELITPILDRMNFELVDVEYVKEGGTWYLRAYIDKE-GGITVNDCEAVAREMNEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ +E  Y  EVSSPG+ RP+ ++ D++R  G  V      +   +++  G +    E
Sbjct: 67  DREDFVEDSYVFEVSSPGLGRPLKKEKDYIRSMGKEVEIRTYRAINREKEFYGILSAYDE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               ++ E   E    +  IA+
Sbjct: 127 NTVTIKTEDGTEMTFEKSDIAL 148


>gi|303240819|ref|ZP_07327332.1| protein of unknown function DUF150 [Acetivibrio cellulolyticus CD2]
 gi|302591707|gb|EFL61442.1| protein of unknown function DUF150 [Acetivibrio cellulolyticus CD2]
          Length = 153

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 39/118 (33%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++   +PV+    F  V +  ++E  N  L+I++++  G +T+ DC+ +S+ IS I
Sbjct: 6   IEEIVAEFAEPVVANHYFELVDVEFIKEGTNWYLRIYIDKP-GGITIDDCQIISEEISDI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD ++ IE  Y LEVSSPG+DRP+ ++SDF R+ G +V  ++      ++   G ++G
Sbjct: 65  LDKKDPIEQSYFLEVSSPGLDRPLKKESDFERFKGELVEVKVFKPIDGRKIFEGNLLG 122


>gi|225075065|ref|ZP_03718264.1| hypothetical protein NEIFLAOT_00064 [Neisseria flavescens
           NRL30031/H210]
 gi|224953549|gb|EEG34758.1| hypothetical protein NEIFLAOT_00064 [Neisseria flavescens
           NRL30031/H210]
          Length = 143

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  + +  L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDKTLPGLGYELVDFELTAQGD--LRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 59  DI--DYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRIESCENDIV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +           I   ++  ARL
Sbjct: 117 TVSFDGK--------TAQIELSNIDKARL 137


>gi|225390158|ref|ZP_03759882.1| hypothetical protein CLOSTASPAR_03908 [Clostridium asparagiforme
           DSM 15981]
 gi|225043752|gb|EEG53998.1| hypothetical protein CLOSTASPAR_03908 [Clostridium asparagiforme
           DSM 15981]
          Length = 156

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + + + P++EE  F  V +  ++E     L+ +++++ G + + DCE +S+ +   L
Sbjct: 9   ESRVEAYLLPLMEEHHFELVDVEYVKEAGTWYLRAYIDKE-GGIAVDDCEVISRKLGDWL 67

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I   Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G +     
Sbjct: 68  DKEDFISESYILEVSSPGLGRPLKKEKDFVRSLGKDVEVRLYRMRDKQKEFTGALSAYDA 127

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               L+ E   +   +   IA+
Sbjct: 128 QTVTLDMEDGSQMVFDRADIAL 149


>gi|229824766|ref|ZP_04450835.1| hypothetical protein GCWU000182_00115 [Abiotrophia defectiva ATCC
           49176]
 gi|229791095|gb|EEP27209.1| hypothetical protein GCWU000182_00115 [Abiotrophia defectiva ATCC
           49176]
          Length = 155

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                ++I P+I + ++  V +  + E  N  L+ +V+++ G  ++ DCE++S+  S +L
Sbjct: 8   EKKAEALILPIINKNNYELVDVEFVREGSNWFLRAYVDKE-GGFSVNDCEKVSREFSDLL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ IE  Y LE+SSPG+ RP+ +  DF R  G  V  ++  +  ++++  G +     
Sbjct: 67  DKEDFIEESYILEISSPGLGRPLKKDKDFERSIGEEVEVKLYKAFEEQKEFSGTLEAYDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   EK      IA+
Sbjct: 127 QTVTIGFEDNTEKTFERKNIAL 148


>gi|303229567|ref|ZP_07316355.1| conserved hypothetical protein [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303232094|ref|ZP_07318797.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302513200|gb|EFL55239.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302515692|gb|EFL57646.1| conserved hypothetical protein [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 152

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 9/153 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
            +   +SSV++ VI   +   V +  + E++  L++++++  G + L DC+ +S+ +S  
Sbjct: 5   AVEEFVSSVVEGVIAGTNLELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQMVSEKLSAA 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I  +Y LEVSSPG+DR + +  DF+R+NG  V  ++       ++  G + G +
Sbjct: 64  LDEKDPIAENYLLEVSSPGLDRVLKKDKDFIRYNGRDVDIQLFKPINGSKQYTGVLQGFT 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +T          E  +N   +     ++   RL
Sbjct: 124 DTTI--------EFSINGESVTFERSAIAQIRL 148


>gi|294142062|ref|YP_003558040.1| hypothetical protein SVI_3291 [Shewanella violacea DSS12]
 gi|293328531|dbj|BAJ03262.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 151

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++  +E +  R   +  ++  K+  L+++++ D G + + DC E S+ IS +
Sbjct: 4   IEKKLEEMLKSPVEALGHRLWGLEYIQAGKHSTLRVYIDNDKG-IFIEDCAETSRQISAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  +    V  ++ +     + L G ++G  
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFSSEQYASYIDETVKIQLTMPVAGSRNLKGTVIGVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +  +          ++ I+ D++    LI
Sbjct: 123 GQMLTISVDGN--------ELIIALDNIRRGNLI 148


>gi|91792365|ref|YP_562016.1| hypothetical protein Sden_1005 [Shewanella denitrificans OS217]
 gi|123166362|sp|Q12QI3|RIMP_SHEDO RecName: Full=Ribosome maturation factor rimP
 gi|91714367|gb|ABE54293.1| protein of unknown function DUF150 [Shewanella denitrificans OS217]
          Length = 151

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++   +E + F    I  +   ++ ++++F++ + G + + DC E S+ +S +
Sbjct: 4   IESRLVEMLTVPVEALGFELWGIEFVHAGRHSIVRVFIDSEKG-IFIEDCAETSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + +  + G     ++ +     + L G I    
Sbjct: 63  LDVEDPITTEYTLEVSSPGVDRPLFTAAQYQAYIGEDAKVQLTMPVAGSRNLKGVISKVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + +         + I+ D++    +I
Sbjct: 123 GQILTLNVDGK--------DLIIALDNIRKGNII 148


>gi|88860546|ref|ZP_01135184.1| hypothetical protein PTD2_16017 [Pseudoalteromonas tunicata D2]
 gi|88817744|gb|EAR27561.1| hypothetical protein PTD2_16017 [Pseudoalteromonas tunicata D2]
          Length = 141

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 75/147 (51%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P +E + F  + + +++  ++  L+++++  +G + + +C ++S+ +S ILDVE+ I
Sbjct: 1   MLEPAVEALGFELLGLEVVQAGRDSTLRLYIDHANG-INVDNCADVSRQVSAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+ +   F++  G  +     L    ++   G ++        L 
Sbjct: 60  TNEYNLEVSSPGLDRPLFKPEHFIKAQGEEIRLRTKLPQDGRRNFKGDLILLDGDMLTLR 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            + +         + +   ++  A +I
Sbjct: 120 IDNK--------DVMVMLGNVEKANII 138


>gi|225016951|ref|ZP_03706143.1| hypothetical protein CLOSTMETH_00866 [Clostridium methylpentosum
           DSM 5476]
 gi|224950265|gb|EEG31474.1| hypothetical protein CLOSTMETH_00866 [Clostridium methylpentosum
           DSM 5476]
          Length = 177

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 73/136 (53%), Gaps = 2/136 (1%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+ G       ++++++P+++++      +   +E  +  L++F+++ DG M + DCE 
Sbjct: 19  GRMAGKGNTVSAVTALVKPIVDDLGLILWDVVFEKEGASWFLRVFIDK-DGIMEVDDCEA 77

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ ++P+LD  + IE  Y LEVSS G+ R + R   F R+ G  V  ++  +   +++ 
Sbjct: 78  VSKRLNPLLDETDPIEQSYYLEVSSAGLGRRLKRPEHFARFLGDEVTVKLYRAVDKRKEF 137

Query: 132 IGKIMGTSETGFFLEK 147
           +G +    +    L +
Sbjct: 138 VGVLAAFEDNTVVLRE 153


>gi|306842730|ref|ZP_07475372.1| Protein of unknown function DUF150 [Brucella sp. BO2]
 gi|306287074|gb|EFM58579.1| Protein of unknown function DUF150 [Brucella sp. BO2]
          Length = 158

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/133 (42%), Positives = 82/133 (61%), Gaps = 2/133 (1%)

Query: 56  FVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
             ER DG MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH
Sbjct: 1   MAERPDGTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGH 60

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +   E  +    ++KL G+I+        +E ++      NE  + I FD +  ARL++T
Sbjct: 61  IAKVETSIVHEGRKKLRGRIVVGDADSVTIESDQISY--GNEPVVRIPFDLISDARLVLT 118

Query: 176 DELLRASLNNYGS 188
           D+L+R +L    +
Sbjct: 119 DDLIRDALRKDKA 131


>gi|294670567|ref|ZP_06735446.1| hypothetical protein NEIELOOT_02289 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307692|gb|EFE48935.1| hypothetical protein NEIELOOT_02289 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 143

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI  ++   +  + +  V   L  +    L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQQILDKTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLSRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 59  DV--DYKNLEISSPGLDRPLKKTADFVRFAGQQAKIKTRLPIDGQKNFIGRIEACENDIV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L  + +          +I  +++  ARL
Sbjct: 117 TLSFDGK--------TASIEINNIDKARL 137


>gi|167766536|ref|ZP_02438589.1| hypothetical protein CLOSS21_01042 [Clostridium sp. SS2/1]
 gi|167711659|gb|EDS22238.1| hypothetical protein CLOSS21_01042 [Clostridium sp. SS2/1]
          Length = 154

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 10/161 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELS 73
           +   + +      ++ P+IE  +F  V +  ++E  N  L+++ +++ G + + DC  +S
Sbjct: 1   MARRVDIETKTEELVLPIIEANNFELVDVEYVKEGANWYLRVYADKE-GGIAIDDCVLIS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +++   LD E+ IE  Y LEVSSPG+ RP+ ++ D++R  G  +  ++  +   +++  G
Sbjct: 60  RSLEEKLDAEDFIEDAYILEVSSPGLGRPLKKEKDYVRSVGKSIDIKLYKAIDKQKEFTG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    E    L  E +         I     S+ SARL +
Sbjct: 120 ILKENMEDQIVLTIEDQ--------DITFEKKSIASARLSL 152


>gi|315126156|ref|YP_004068159.1| hypothetical protein PSM_A1065 [Pseudoalteromonas sp. SM9913]
 gi|315014670|gb|ADT68008.1| hypothetical protein PSM_A1065 [Pseudoalteromonas sp. SM9913]
          Length = 141

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P +E + F    +  ++  ++  L++++  +DG +++ +C + S+ IS ILDVE+ I
Sbjct: 1   MLTPAVEMLGFELHGLEFVQAGRHSTLRVYIAHEDG-ISVDNCADASRQISAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+ ++  + +  G  V     L    ++   G ++  S     L 
Sbjct: 60  TNEYDLEVSSPGVDRPLFKQDHYEQAQGEEVRVRTKLPQDGRRNFKGDLIAVSSDMITLS 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            +          +  I   ++  A +I
Sbjct: 120 SDG--------AEHLIMLSNIERANII 138


>gi|319637702|ref|ZP_07992468.1| hypothetical protein HMPREF0604_00091 [Neisseria mucosa C102]
 gi|317400857|gb|EFV81512.1| hypothetical protein HMPREF0604_00091 [Neisseria mucosa C102]
          Length = 143

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  + +  L+IF++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDKTLPGLGYELVDFELTAQGD--LRIFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 59  DI--DYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRIESCENDIV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +           I   ++  ARL
Sbjct: 117 TVSFDGK--------TAQIELSNIDKARL 137


>gi|330722349|gb|EGH00206.1| NusA [gamma proteobacterium IMCC2047]
          Length = 150

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           +  DMGL    + +++PV+E +      +  +++ +   L++++E D G + + DCE +S
Sbjct: 1   MVSDMGL----TELVRPVVEGLELEFWGLEMVVQGREKTLRVYIESDKG-IAVEDCEAVS 55

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +S + DVE+ I G Y LEVSSPG+DRP+   + F ++ G  V  ++  +   ++   G
Sbjct: 56  RQLSSLFDVEDPIAGEYTLEVSSPGLDRPLFEAAQFAQYVGETVKIKLRSAFEGRRNFRG 115

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            + G  +    +  +          +  +  +S+  A ++
Sbjct: 116 ALSGVEDDEVIIVVDGH--------EYILPIESVEKANIV 147


>gi|51892656|ref|YP_075347.1| hypothetical protein STH1518 [Symbiobacterium thermophilum IAM
           14863]
 gi|81388945|sp|Q67P90|RIMP_SYMTH RecName: Full=Ribosome maturation factor rimP
 gi|51856345|dbj|BAD40503.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 160

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 5/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +  P    +    V + L++E     L+++++++ G +   DCE LS+ +   
Sbjct: 8   LEELVEELAAPHAAALGLELVGVELVKEGAYRYLRVYIDKE-GGVGFDDCEALSRVVDAQ 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD       +   EVSSPG+DRP+ R++DF R+ GH V          ++  +G++ G  
Sbjct: 67  LDEILPNPPYDFFEVSSPGLDRPLKREADFARYVGHKVVVTTYAPVDGQKSFVGELQGLV 126

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    L      E       IA+    + SARL V
Sbjct: 127 DGRVTLTL---TEGKGRGQTIALDRKQVASARLYV 158


>gi|241760269|ref|ZP_04758364.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|261379746|ref|ZP_05984319.1| hypothetical protein NEISUBOT_03607 [Neisseria subflava NJ9703]
 gi|241319147|gb|EER55625.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|284797424|gb|EFC52771.1| hypothetical protein NEISUBOT_03607 [Neisseria subflava NJ9703]
          Length = 143

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  + +  L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDKTLPGLGYELVDFELTAQGD--LRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 59  DI--DYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRIESCENDIV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +           I   ++  ARL
Sbjct: 117 TVSFDGK--------TAQIELSNIDKARL 137


>gi|71281315|ref|YP_268926.1| hypothetical protein CPS_2201 [Colwellia psychrerythraea 34H]
 gi|91208404|sp|Q482U1|RIMP_COLP3 RecName: Full=Ribosome maturation factor rimP
 gi|71147055|gb|AAZ27528.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 151

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 10/153 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ +++P +EE       I  +    N +L++F++ ++G + + DC E+S+ +  IL
Sbjct: 5   EQKLTDLLRPAVEETGKTLHGIEYISAGNNSVLRLFIDHENG-INVDDCAEVSRQVGAIL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+   + F    G  +  +I +    ++K  G ++    
Sbjct: 64  DVEDPISSEYSLEVSSPGVDRPLFELAHFQEVIGETINVKISMPLNGRRKFKGPLVAIEN 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +E        ++ +   ++  ++  A L+
Sbjct: 124 DTLIVE--------VDSIDYELAISNIDKANLV 148


>gi|257468348|ref|ZP_05632442.1| putative cytoplasmic protein [Fusobacterium ulcerans ATCC 49185]
 gi|317062621|ref|ZP_07927106.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688297|gb|EFS25132.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
          Length = 159

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 10/155 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I +++ PV+ EM    V I  L++     ++I+VE  +G++TL DC  +S  I  
Sbjct: 8   NILKKIETIVTPVVNEMELSLVDIEYLQDGGYWYVRIYVENPEGDITLEDCAAISNKIDE 67

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
             D++ +IE  + LEVSSPGI+RP+ +  D++R+ G      +     D +   G I   
Sbjct: 68  --DIDKLIEQRFFLEVSSPGIERPLKKIEDYIRFKGEKAKLSLKHKVDDNKNFEGIITDC 125

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            ++  +LE E           + I F  +  A L+
Sbjct: 126 KDSIIYLELEDEKV-------MEIPFSEVRKANLV 153


>gi|238927233|ref|ZP_04658993.1| protein of hypothetical function DUF150 [Selenomonas flueggei ATCC
           43531]
 gi|238884908|gb|EEQ48546.1| protein of hypothetical function DUF150 [Selenomonas flueggei ATCC
           43531]
          Length = 163

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 13/163 (7%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDC 69
           YE R      +   +  +++ ++ ++     V +  ++E++  L++++++  G + + DC
Sbjct: 9   YEKRESMSAKIEERVEEMVRGLLTDLPAIELVDVEYVKERDSYLRVYIDK-TGGIDIDDC 67

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + LS+ +  +LD E+ I   Y LEVSSPG+DR + ++ DF R +G  V   +      K+
Sbjct: 68  QSLSERLEEMLDREDFIPDAYILEVSSPGLDRVLRKERDFTREHGRTVDVTLYAPFEGKK 127

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +  G + G       L+             + I    +   RL
Sbjct: 128 QWTGTLAGYDGETLTLDDG-----------VQIPMKQVSQVRL 159


>gi|332653589|ref|ZP_08419334.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
 gi|332518735|gb|EGJ48338.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
          Length = 151

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 70/146 (47%), Gaps = 4/146 (2%)

Query: 19  MGLAGDISS-VIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           M    ++++ + QP +E        +  ++E     L+ +++++ G +++ DCE +S+ +
Sbjct: 1   MAKVTEMAAQLAQPFVEAAGCSLWDVEYVKEAGEWYLRFYIDKE-GGVSINDCEAVSRPL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IEG Y LEVSS G DR + +   F ++ G  V  ++  +   ++  +G + 
Sbjct: 60  SDALDEADPIEGSYTLEVSSAGADRALKKPEHFAQFQGAEVEVKLYRARDGRKDYVGLLE 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAI 162
              +    L           + ++A+
Sbjct: 120 SYEDGDVTLNV-GGAPMKFEKKELAL 144


>gi|227529105|ref|ZP_03959154.1| protein of hypothetical function DUF150 [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350949|gb|EEJ41240.1| protein of hypothetical function DUF150 [Lactobacillus vaginalis
           ATCC 49540]
          Length = 165

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +S + +P++ +       +  ++E K+  L+++V++ DG +TL DC ++S  +S 
Sbjct: 8   NVVEIVSGLAKPILAKHDCYLYDLEFVKEGKSWYLRVYVDK-DGGVTLEDCADISDELSE 66

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+ +++D+ R     +   +      K+   G ++
Sbjct: 67  ALDNTEPDPIPQAYFLEVSSPGAERPLKKEADYERAINDYIHVSLYQQIEGKKAYEGTLV 126

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     LE   +      + +I I    +  ARL +
Sbjct: 127 ELTPDELTLEYMDKTR----QRRIKIERKMIAQARLAI 160


>gi|332799220|ref|YP_004460719.1| Ribosome maturation factor rimP [Tepidanaerobacter sp. Re1]
 gi|332696955|gb|AEE91412.1| Ribosome maturation factor rimP [Tepidanaerobacter sp. Re1]
          Length = 157

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 11/151 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + ++    +E   F  + +  ++E  N  L+ ++++  G +T+ DC+ +S  +  +LD
Sbjct: 8   KKLWNLGYKAVEAAGFELIDMEFVKESGNWYLRYYIDKP-GGITIDDCQTVSVEVGRLLD 66

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           + ++I   Y LEVSSPG++RP+    DFLR+ G  V  +     GDK+   G +   S  
Sbjct: 67  IADLIPCSYILEVSSPGLERPIKTDKDFLRYIGSFVEIKTFEKIGDKKVFTGILEDYSNN 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              ++         N     I  + + SA+L
Sbjct: 127 TVTVK---------NGECYLIPKEKISSAKL 148


>gi|212634072|ref|YP_002310597.1| hypothetical protein swp_1216 [Shewanella piezotolerans WP3]
 gi|212555556|gb|ACJ28010.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 141

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 73/147 (49%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++  +E +      +  ++  K+ +L+++++ + G + + DC E S+ +S ++DVE+ I
Sbjct: 1   MLKAPVEALGHELWGLEYIQAGKHSILRLYIDNEKG-IFIEDCAETSRQVSAVMDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G ++G       L 
Sbjct: 60  STEYTLEVSSPGVDRPLFTAEQYQLYIGETVKVQVTMPVAGSRNLKGTVIGIEGQMLTLS 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            +          ++ I+ D++    LI
Sbjct: 120 VDGN--------ELIIALDNIRKGNLI 138


>gi|253701582|ref|YP_003022771.1| hypothetical protein GM21_2984 [Geobacter sp. M21]
 gi|259585778|sp|C6E2Q3|RIMP_GEOSM RecName: Full=Ribosome maturation factor rimP
 gi|251776432|gb|ACT19013.1| protein of unknown function DUF150 [Geobacter sp. M21]
          Length = 160

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 13/163 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ +I  V   +    V +    E +++++++F+E+ +G + L DC E+S+
Sbjct: 1   MAKVDVVERVTEIIAEVGAPLGIELVDLEYKREGRDMVVRVFLEKREGGINLDDCAEVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
            +S ILDVE+ +   Y LEVSSPGI RP+ +  D+ R+ GH++  +      D     ++
Sbjct: 61  QLSDILDVEDFMPERYTLEVSSPGICRPLKKVVDYERFMGHLIKVKTFEMLPDEAGNKRK 120

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              GK+ G ++    ++  +            +  D +  A L
Sbjct: 121 TFTGKLTGIADGVIGIDLTE-------GQHARVPLDKVAKAHL 156


>gi|262197039|ref|YP_003268248.1| hypothetical protein Hoch_3856 [Haliangium ochraceum DSM 14365]
 gi|262080386|gb|ACY16355.1| protein of unknown function DUF150 [Haliangium ochraceum DSM 14365]
          Length = 209

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 21/183 (11%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER------ 59
            H  +   +  +  +   +  + +PV     +  V +SL + +   L+Q+F++       
Sbjct: 18  AHLFFTRGMRANDSMTEQLMRIAEPVCASAGYELVDLSLTQSRVGWLVQVFIDHMHSDET 77

Query: 60  -------DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
                  +   ++L DCE +S+ +S +LDVE+ +   Y LEVSSPG+DRP+   + F R+
Sbjct: 78  STVAGGEEASEVSLEDCEHVSRELSAVLDVEDPLPFAYNLEVSSPGLDRPLRTVAHFQRF 137

Query: 113 NGHVVACEIVLSSG--DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            GH V   +  +     ++   G++   S      E       +++     +  D + SA
Sbjct: 138 AGHEVKVRLDGTGDATGRRNFKGRLEAVSA-----EAPASIVVNVDGAPHTLLIDDIESA 192

Query: 171 RLI 173
           R++
Sbjct: 193 RVV 195


>gi|259016312|sp|Q3IJ55|RIMP_PSEHT RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L  D+ +++ P +E + F    +  ++  ++  L++++  + G +++ +C + S+ IS
Sbjct: 2   TKLEQDLVAMLTPAVEMLGFELHGLEFVQAGRHSTLRVYITHEAG-ISVDNCADASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I   Y LEVSSPG+DR + ++  + +  G  V     L    ++   G ++ 
Sbjct: 61  AILDVEDPITNEYDLEVSSPGVDRLLFKQDHYEQAQGEEVQLRTKLPQDGRRNFKGDLIA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +     L  +          +  I   ++  A +I
Sbjct: 121 VTSDMITLSSDG--------TEHLIMLSNIERANII 148


>gi|325267088|ref|ZP_08133757.1| protein of hypothetical function DUF150 [Kingella denitrificans
           ATCC 33394]
 gi|324981441|gb|EGC17084.1| protein of hypothetical function DUF150 [Kingella denitrificans
           ATCC 33394]
          Length = 145

 Score =  157 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 76/149 (51%), Gaps = 11/149 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +  M +  V + L  +   +L++F++++ G +T+ DC  +S  +S +  VE
Sbjct: 2   DLQQILETTLPGMGYELVDVELTAQG--ILRVFIDKE-GGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++   +  LE+SSPG+DRP+ + +DF+R+ G +V  +  L    ++  IG+I    E   
Sbjct: 59  DV--DYKHLEISSPGLDRPLKKAADFVRFTGSMVKLKTRLPVDGQKNFIGRIESFDEAAQ 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +          +     I   ++  AR+
Sbjct: 117 TI------VLAFDGKTAQIELSNVDKARI 139


>gi|187933637|ref|YP_001885467.1| hypothetical protein CLL_A1269 [Clostridium botulinum B str. Eklund
           17B]
 gi|226695891|sp|B2TJ51|RIMP_CLOBB RecName: Full=Ribosome maturation factor rimP
 gi|187721790|gb|ACD23011.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 153

 Score =  157 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 83/153 (54%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++P++EE+S+    +  ++E     L+I++++++ +++L DCE++S+ +S I
Sbjct: 6   LLEKVEVLVKPIVEELSYELYYLEYVKENGEYYLRIYIDKEEDSISLNDCEKVSRRVSEI 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ IE  Y LEVSSPG++R + ++  F ++ G  V      S    +K+ G +    
Sbjct: 66  LDVEDPIEDSYYLEVSSPGLNRGLYKEEHFKKFIGREVLVRFNGSLEGMKKIQGILKEAD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                ++ EK+         + I  + +  A L
Sbjct: 126 NEFITVQGEKK---------LKIPTEKIKGANL 149


>gi|157825876|ref|YP_001493596.1| hypothetical protein A1C_04075 [Rickettsia akari str. Hartford]
 gi|166979960|sp|A8GNW3|RIMP_RICAH RecName: Full=Ribosome maturation factor rimP
 gi|157799834|gb|ABV75088.1| hypothetical protein A1C_04075 [Rickettsia akari str. Hartford]
          Length = 166

 Score =  157 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 90/164 (54%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V I      + +++I ++  +G  +++ DC + S  IS I
Sbjct: 4   IEQQITNVIEKSLTDMGFELVLIKFKGVNHKVVEILIDSLNGEKISVADCTKASSTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+ G  V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEDAYSLEVASSGLERPLVKFENYNRFLGREVKVKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +L+ E          ++ I +D + +A L++T+E+L+  L
Sbjct: 124 NNKVYLKCE--------AQEVLIDYDLIKNANLVLTEEVLKKLL 159


>gi|293115578|ref|ZP_05792144.2| putative cytoplasmic protein [Butyrivibrio crossotus DSM 2876]
 gi|292808915|gb|EFF68120.1| putative cytoplasmic protein [Butyrivibrio crossotus DSM 2876]
          Length = 166

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +    + +I P+IE   F  V +  ++E +   L+ ++++  G +T+ DC E+S+  S 
Sbjct: 17  DIESKATELIMPIIESCGFELVDLEYVKEGSSKYLRAYIDKP-GGITVDDCAEVSRPFSD 75

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + I+  Y LEVSSPG+ RP  +  DF R     V  ++       +   G +   
Sbjct: 76  KLDEADFIDEAYILEVSSPGLFRPFKKDKDFERNLMEEVELKLYRQVDHLKDYTGLLKKF 135

Query: 139 SETGFFLEKEKRGEKDMNELQIAI 162
            +    +E E   EK  +   +AI
Sbjct: 136 DKDTVTIELENGDEKTFDRSNLAI 159


>gi|251780527|ref|ZP_04823447.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084842|gb|EES50732.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 153

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 83/153 (54%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++P++EE+S+    +  ++E     L+I++++++ +++L DCE++S+ +S +
Sbjct: 6   LLEKVEVLVKPIVEELSYELYYLEYVKENGEYYLRIYIDKEEDSISLNDCEKVSRRVSEM 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ IE  Y LEVSSPG++R + ++  F ++ G  V      S    +K+ G +    
Sbjct: 66  LDVEDPIEDSYYLEVSSPGLNRGLYKEEHFKKFIGREVLVRFNGSLEGMKKIQGILKDAD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +E EK         ++ I  + +  A L
Sbjct: 126 NEFITVEAEK---------ELKIPTEKIKGANL 149


>gi|88705683|ref|ZP_01103393.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88700196|gb|EAQ97305.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 167

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 10/164 (6%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCE 70
           + R          + +++ P +E + F       L + K+ +L++++E ++G + + DC 
Sbjct: 11  DDRRRAMSARENKLQALLAPTVEALGFELWGTEYLIQGKHSVLRLYIESENG-VQVTDCA 69

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ +  +LDVE  I G Y LEVSSPG+DR + R   +  + G  V   +      ++K
Sbjct: 70  AVSEQVGALLDVEEPISGEYVLEVSSPGVDRRLFRLEQYPGYVGEEVELRLRSPFEGRRK 129

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             G + G  +    L  +          +  + F  +  A+L +
Sbjct: 130 FKGILRGVEDEDIVLLVDDH--------EYLLPFGDVDRAQLTL 165


>gi|85860523|ref|YP_462725.1| hypothetical protein SYN_01790 [Syntrophus aciditrophicus SB]
 gi|123517502|sp|Q2LWU4|RIMP_SYNAS RecName: Full=Ribosome maturation factor rimP
 gi|85723614|gb|ABC78557.1| hypothetical protein SYN_01790 [Syntrophus aciditrophicus SB]
          Length = 160

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 6/154 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  DI  + +PVI       V++  L  K   L++I+++R+ G +TL DC E+S  +  +
Sbjct: 9   LREDIWQLAEPVIASEGLELVEVECLRMKTRWLVRIYMDRE-GGVTLDDCSEISNQLGDV 67

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV ++    Y LEVSSPG+DRP+VR  DF+R+ G  V+  +       +   G+++   
Sbjct: 68  LDVHDLPPDPYTLEVSSPGLDRPLVRDKDFVRYQGCEVSIRLEQKVDGIRNFRGRLLEYV 127

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           E     +  K    +M      I  D ++ A L+
Sbjct: 128 EE----DGRKILVIEMASKLYRIPRDLIVKANLV 157


>gi|304437179|ref|ZP_07397140.1| protein of hypothetical function DUF150 [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369841|gb|EFM23505.1| protein of hypothetical function DUF150 [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 163

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 13/163 (7%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDC 69
           YE R      +   +  +++ ++ +      V +  ++E++  L++++++  G + + DC
Sbjct: 9   YEKRESMSAKIEERVEEMVRGLLTDSPAIELVDVEYVKERDYYLRVYIDKA-GGIDIDDC 67

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + LS+ +  ILD E++I   Y LEVSSPG+DR + ++ DF+R +G VV   +      K+
Sbjct: 68  QRLSERLEEILDREDVIPDAYTLEVSSPGLDRVLRKERDFVREHGRVVDVTLYAPFEGKK 127

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +  G + G       L+             I I    +   RL
Sbjct: 128 QWTGTLAGYDGETLTLDDG-----------IRIPMQQVSQVRL 159


>gi|172057850|ref|YP_001814310.1| hypothetical protein Exig_1841 [Exiguobacterium sibiricum 255-15]
 gi|226696098|sp|B1YI66|RIMP_EXIS2 RecName: Full=Ribosome maturation factor rimP
 gi|171990371|gb|ACB61293.1| protein of unknown function DUF150 [Exiguobacterium sibiricum
           255-15]
          Length = 155

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  + +P++E      V +  ++E  +  L++ +++ DG + L DC  +++ +S
Sbjct: 2   TNVTEKVEQLAKPIVEREGMELVDVEFVKEGADWFLRVSIDK-DGGVDLEDCVNINEKLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ ++ I+  Y L+V+SPG +RP+ +  DF +  G  V  +      D  +  G ++ 
Sbjct: 61  EALNQDDPIDEPYYLDVASPGAERPLKKTEDFEKAIGKHVYIKTHDPVKDATEFEGTLLT 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            SE    LE   +  K    L+I I  + +  ARL V
Sbjct: 121 YSEEMLELEVRVKTRK----LKIEIPVNKIAMARLAV 153


>gi|116495059|ref|YP_806793.1| hypothetical protein LSEI_1577 [Lactobacillus casei ATCC 334]
 gi|191638562|ref|YP_001987728.1| hypothetical protein LCABL_17900 [Lactobacillus casei BL23]
 gi|239631346|ref|ZP_04674377.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066622|ref|YP_003788645.1| hypothetical protein LCAZH_1564 [Lactobacillus casei str. Zhang]
 gi|122263524|sp|Q038M1|RIMP_LACC3 RecName: Full=Ribosome maturation factor rimP
 gi|259585801|sp|B3WER9|RIMP_LACCB RecName: Full=Ribosome maturation factor rimP
 gi|116105209|gb|ABJ70351.1| hypothetical protein LSEI_1577 [Lactobacillus casei ATCC 334]
 gi|190712864|emb|CAQ66870.1| Putative uncharacterized protein [Lactobacillus casei BL23]
 gi|239525811|gb|EEQ64812.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300439029|gb|ADK18795.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
 gi|327382600|gb|AEA54076.1| Ribosome maturation factor rimP [Lactobacillus casei LC2W]
 gi|327385798|gb|AEA57272.1| Ribosome maturation factor rimP [Lactobacillus casei BD-II]
          Length = 159

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++++++P++++  F    +  ++E     L++++++  G +TL +C  +S+A+S 
Sbjct: 5   SVVETVTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDK-TGGITLDECVMVSEALSE 63

Query: 79  ILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + I   Y LEVSSPG +RP+  ++D+ +  G  +   +      K+   G + 
Sbjct: 64  KLDAMDPDPIPQQYFLEVSSPGAERPLKHETDYEQAVGDYIHVSLFKKLDGKKVFEGTLK 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   L  + +  K        I    + SARL +
Sbjct: 124 ELLPDQLTLTVKDKSRKFDQ----VIDRQLIASARLAI 157


>gi|46578926|ref|YP_009734.1| hypothetical protein DVU0511 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603473|ref|YP_967873.1| hypothetical protein Dvul_2430 [Desulfovibrio vulgaris DP4]
 gi|51316683|sp|Q72EQ8|RIMP_DESVH RecName: Full=Ribosome maturation factor rimP
 gi|166987475|sp|A1VG80|RIMP_DESVV RecName: Full=Ribosome maturation factor rimP
 gi|46448338|gb|AAS94993.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563702|gb|ABM29446.1| protein of unknown function DUF150 [Desulfovibrio vulgaris DP4]
 gi|311232784|gb|ADP85638.1| protein of unknown function DUF150 [Desulfovibrio vulgaris RCH1]
          Length = 172

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 4/161 (2%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                L   I+ +  P +  +      I L      ++++FV+  +G +T+  C E+S+ 
Sbjct: 1   MTKQALDATIADMAGPFLASLGLELWGIELSYGGRTVVRLFVDGPEG-VTIDQCAEVSRH 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS---GDKQKLI 132
           +   L+VE++I   Y LEVSSPG++RP  R      + G  +   ++  +     ++K  
Sbjct: 60  VGLALEVEDVISSAYVLEVSSPGLERPFFRAEQMSPYVGRQIELTLIDPTPEWPGRRKFR 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G+++        L  E     +  E  +  S+  +  A LI
Sbjct: 120 GELLAVEGDTVVLRPEGAPAPEAEEAVLRTSWQGVRKANLI 160


>gi|164688522|ref|ZP_02212550.1| hypothetical protein CLOBAR_02167 [Clostridium bartlettii DSM
           16795]
 gi|164602935|gb|EDQ96400.1| hypothetical protein CLOBAR_02167 [Clostridium bartlettii DSM
           16795]
          Length = 153

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 89/156 (57%), Gaps = 9/156 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I  ++QP+++  +   V I  ++E     L+I++E++ G +TL DC E+S+ ++P
Sbjct: 4   NIESTIEELVQPIVDARNIEIVDIEYVKEAGQFYLRIYLEKE-GGITLDDCAEVSRELNP 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD ++ I+ +Y LEV SPG+DRP+ ++ DF+R+ G+ V  ++       ++L G+++G 
Sbjct: 63  ILDEKDPIKDNYFLEVCSPGLDRPLKKEKDFIRYAGYDVEIKLYKPLNGTKQLEGELIGL 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +E        K+ +  ++  ++      +   +L V
Sbjct: 123 TED-------KKIKVVIDNNEVEFDKKDIALIKLAV 151


>gi|259585805|sp|Q0AFJ1|RIMP_NITEC RecName: Full=Ribosome maturation factor rimP
          Length = 143

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 11/149 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++P I  M +  V I        LL++FV++ DG +TL DC  +S  +  +L VEN
Sbjct: 3   LFELLEPTIAGMGYELVDIE-QSAPGRLLRVFVDKKDGAITLADCVAVSNHLGQLLAVEN 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           I   + RLEVSSPG+DRP+ +++DF+R+ G  +   + ++   ++  +G +    +    
Sbjct: 62  I--DYNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQGQRNFVGTLTEVGDDALM 119

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLI 173
           L  + +         +     +L  ARLI
Sbjct: 120 LNVDGK--------LLQFELKNLEKARLI 140


>gi|237748746|ref|ZP_04579226.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229380108|gb|EEO30199.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 162

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 81/157 (51%), Gaps = 14/157 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-RDD----GNMTLRDCEELSQAISPI 79
           +  +I+  +    +  V +     +  LL+++++ + +    GN++L DCE++S+ +S +
Sbjct: 2   LQELIEKTVSGCGYDLVDVE--RAQGNLLRVYIDFKPEDAGRGNISLEDCEKVSRQLSHV 59

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIGKIM 136
           L VE++   + RLEVSSPG+DRP+ + +DF+R+ G     ++         ++   G ++
Sbjct: 60  LMVEDV--DYDRLEVSSPGLDRPLKKFADFVRFVGMEAHVKLRKPVTGMSNRKTFQGILL 117

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                   LE E + E + + L   I+   +  A L+
Sbjct: 118 APEGDELALEFEGKDENNNSVLHFTIA--DIDKAHLV 152


>gi|304316866|ref|YP_003852011.1| hypothetical protein Tthe_1413 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778368|gb|ADL68927.1| protein of unknown function DUF150 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 151

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 82/148 (55%), Gaps = 4/148 (2%)

Query: 19  MGLAGDIS-SVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           M    +++ +++ P IE+ +F  V +   +E N   L+++++++ G ++L DC+ +S+ +
Sbjct: 1   MSRIEELTRNLVAPAIEKNNFELVDVEYKKEGNNWYLRVYIDKE-GGVSLDDCQIISEYL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IE  Y LEVSSPGIDRP+  + DF ++ G +V   +      K+K  G+++
Sbjct: 60  SEKLDEVDPIENSYILEVSSPGIDRPLKTQRDFDKFKGSLVEVSLYQPIDKKKKYEGELV 119

Query: 137 GTSETGFFLEKEK-RGEKDMNELQIAIS 163
           G       +     R E D+N++ +   
Sbjct: 120 GLINDKVVITDNGERKEFDINDISLVKP 147


>gi|34496915|ref|NP_901130.1| hypothetical protein CV_1460 [Chromobacterium violaceum ATCC 12472]
 gi|51316759|sp|Q7NY15|RIMP_CHRVO RecName: Full=Ribosome maturation factor rimP
 gi|34102771|gb|AAQ59135.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 141

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +  + +  V   +        ++F+++  G +T+ DC  +S   + +  VE
Sbjct: 2   DVRLLLENTLPGLGYELVDFEMTPGGG--FRVFIDKP-GGITVEDCVLVSNHFTRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ +++DF+R++G +   +  +    ++K  G++ G  +   
Sbjct: 59  NV--DYERLEVSSPGLDRPLKKEADFVRFSGQLAKIKTRMPIEQQKKFTGRLAGVEDGSV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L+ + R         + I F ++  ARL
Sbjct: 117 KLDVDGRI--------VEIPFANIDKARL 137


>gi|238020477|ref|ZP_04600903.1| hypothetical protein GCWU000324_00359 [Kingella oralis ATCC 51147]
 gi|237867457|gb|EEP68463.1| hypothetical protein GCWU000324_00359 [Kingella oralis ATCC 51147]
          Length = 145

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 11/149 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  +    L++F+++  G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDTTLPGLGYELVDHELTAQG--TLRVFIDKA-GGITVDDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   +  LE+SSPG+DRP+ + +DF+R+ G  +  +  L    ++  IG++   +++  
Sbjct: 59  NI--DYKNLEISSPGLDRPLKKAADFIRFAGSQIKLKTRLPVDGQKNFIGRLEAFNDSTQ 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L          +     I   ++  ARL
Sbjct: 117 TLTL------SFDGKTAEIELGNIDKARL 139


>gi|167625061|ref|YP_001675355.1| hypothetical protein Shal_3149 [Shewanella halifaxensis HAW-EB4]
 gi|189039835|sp|B0TQA4|RIMP_SHEHH RecName: Full=Ribosome maturation factor rimP
 gi|167355083|gb|ABZ77696.1| protein of unknown function DUF150 [Shewanella halifaxensis
           HAW-EB4]
          Length = 151

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++  +E +  +   +  ++  K+ +L+++++ + G + + DC E S+ +S +
Sbjct: 4   LERKLVEMLKAPVEALGHQLWGLEYIQAGKHSILRLYIDNEKG-IFIEDCAEASRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++R +     +  + G  V  ++ +     + L G + G  
Sbjct: 63  LDVEDPITSEYTLEVSSPGVERLLFTAEQYKAYIGETVKVQLTMPVAGSRNLKGTVTGVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ ++ D++    LI
Sbjct: 123 GQMLNLSVDGN--------ELIVALDNIRKGNLI 148


>gi|331082959|ref|ZP_08332079.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330399954|gb|EGG79612.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 154

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 78/147 (53%), Gaps = 4/147 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +++P++ E +F  V +  ++E  N  L+ ++++ +G +T+ DCE +S+A S  L
Sbjct: 8   EQKAEVLLEPIVAEHNFELVDVEYVKEGSNFYLRAYIDKPEG-ITVDDCEIVSRAFSQKL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y +EVSSPG+ RP+ ++ D+ R  G  +      +   +++  G +   +E
Sbjct: 67  DEEDFIDEAYIMEVSSPGLGRPLKKEKDYKRSMGKELEIRTYRAINKEKEFYGILKEYNE 126

Query: 141 TGFFLEKEKR--GEKDMNELQIAISFD 165
           +   ++ E      +  +   I ++FD
Sbjct: 127 SSVTIDCEGTEMTFQKSDIALIRLAFD 153


>gi|322418687|ref|YP_004197910.1| hypothetical protein GM18_1160 [Geobacter sp. M18]
 gi|320125074|gb|ADW12634.1| protein of unknown function DUF150 [Geobacter sp. M18]
          Length = 159

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 14/163 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ +I  +   +    V +    E +++++++F+E++ G +TL DC ++S+
Sbjct: 1   MAKVDVVERVTEIITEIGAPLGIGLVDLEYKREGRDMVVRVFLEKE-GGITLDDCADVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
            +S ILDVE+ +   Y LEVSSPGI RP+ + +D+ R+ GH+V  +   +  D     ++
Sbjct: 60  QLSDILDVEDFMPERYTLEVSSPGICRPLKKVADYERFMGHLVKVKTFDTLTDDAGNKRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              GK+ G       ++  +           +I  D +  A L
Sbjct: 120 TFTGKLAGIQGGVVSIDLTE-------GQHASIPLDKVAKANL 155


>gi|297180709|gb|ADI16918.1| uncharacterized protein conserved in bacteria [uncultured gamma
           proteobacterium HF0010_16J05]
          Length = 171

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
              I  +I P +E +      I  L +     L I++ER DG + +  C  +S+ +  +L
Sbjct: 24  EKQIEELIAPTVESLGCEVWGIEYLSQGKYSKLLIYIERADG-IDVDLCATVSKHVGDLL 82

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE +I   Y LEVSSPG+DR + ++  +L   G  V   +      ++++ G + G  +
Sbjct: 83  DVEELISSRYTLEVSSPGMDRVLFKEQHYLDHVGERVEIRLNYPFEGRKRISGILAGIED 142

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               +++         E +  +  +++  ARL+ T
Sbjct: 143 QTAIVQE--------AEDEFLLPLENVQKARLVPT 169


>gi|259585824|sp|A8ZZ67|RIMP_DESOH RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 11/163 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER--DDGNMTLRDCEELS 73
           G   +   +  +++PV        V +   +E +  +L++++     D  +TL DC  +S
Sbjct: 3   GGNPVVAQMWKLVEPVCSAEGMELVFVEFNKESQGRVLRLYLASGVPDRGVTLEDCAGIS 62

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++ +LDV      +Y LEVSS G++RP+ ++ DF R+ G  V         D++   G
Sbjct: 63  RQVNGLLDVYLPELDNYTLEVSSAGLERPLAKEIDFERFAGSRVKIRTAAPVSDRKNFTG 122

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
            ++G S+    L  + +           I +  +  A+L+  D
Sbjct: 123 ILLGVSDGNVRLMVDDK--------TFVIPYGEITRAKLVNED 157


>gi|188589052|ref|YP_001920614.1| hypothetical protein CLH_1220 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|226696282|sp|B2V4G5|RIMP_CLOBA RecName: Full=Ribosome maturation factor rimP
 gi|188499333|gb|ACD52469.1| conserved hypothetical protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 153

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 83/153 (54%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++P++EE+S+    +  ++E     L+I++++++ +++L DCE++S+ +S I
Sbjct: 6   LLEKVEVLVKPIVEELSYELYYLEYVKENGEYYLRIYIDKEEDSISLNDCEKVSRRVSEI 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ IE  Y LEVSSPG++R + ++  F ++ G  V      S    +K+ G +    
Sbjct: 66  LDVEDPIEDSYYLEVSSPGLNRGLYKEEHFKKFIGREVLVRFNGSLEGMKKIQGILKEAE 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +E EK         ++ I  + +  A L
Sbjct: 126 NEFITVEGEK---------ELKIPTEKIKGANL 149


>gi|238916822|ref|YP_002930339.1| hypothetical protein EUBELI_00890 [Eubacterium eligens ATCC 27750]
 gi|259585771|sp|C4Z5N3|RIMP_EUBE2 RecName: Full=Ribosome maturation factor rimP
 gi|238872182|gb|ACR71892.1| hypothetical protein EUBELI_00890 [Eubacterium eligens ATCC 27750]
          Length = 156

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 72/149 (48%), Gaps = 2/149 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
               + +IQPV+E        +  ++E  +  L+++++++ G +T+ DC+ +S+A + IL
Sbjct: 8   EAKTTELIQPVVEANGVELFDVDYVKEGSDWYLRVYIDKE-GGVTIDDCQNVSRAFNEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D EN I+  Y  EVSSPG+ RP+ ++ D+ +  G ++  ++       ++  G +    +
Sbjct: 67  DRENYIDDQYIFEVSSPGLTRPLKKEKDYEKSIGRMIEIKLFSPVDKSKEYSGVLKEYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLS 169
               +  +   +         I +  +  
Sbjct: 127 DTVTISIDDVTKTFDRSNLAMIRWAFVDE 155


>gi|218133588|ref|ZP_03462392.1| hypothetical protein BACPEC_01457 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990963|gb|EEC56969.1| hypothetical protein BACPEC_01457 [Bacteroides pectinophilus ATCC
           43243]
          Length = 155

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 74/142 (52%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P+I+   F  V +  ++E  +  L++++++ DG +T+ DCE++S+A + IL
Sbjct: 8   EKKTEELITPLIDAEGFELVDVEYVKEGADWYLRVYIDK-DGGITVNDCEKISRAFNEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y  EVSSPG+ RP+ +  D+ R  G ++  ++       ++   ++    +
Sbjct: 67  DREDYIDDAYIFEVSSPGLLRPLKKDKDYQRNLGKLLEVKLFAPLNGVKEFEAELKSYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               L  +   E  +   +I++
Sbjct: 127 ESATLVMDDDTEVTVKRSEISL 148


>gi|260589531|ref|ZP_05855444.1| putative cytoplasmic protein [Blautia hansenii DSM 20583]
 gi|260540099|gb|EEX20668.1| putative cytoplasmic protein [Blautia hansenii DSM 20583]
          Length = 154

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 76/147 (51%), Gaps = 4/147 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                ++++P++ E  F  V +  ++E  N  L+ ++++ +G +T+ DCE +S+  S  L
Sbjct: 8   EQKAEALLEPIVAEHDFELVDVEYVKEGSNFYLRAYIDKPEG-ITVDDCEVVSRTFSQKL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y +EVSSPG+ RP+ ++ D+ R  G  +      +   +++  G +   +E
Sbjct: 67  DEEDFIDEAYIMEVSSPGLGRPLKKEKDYKRSMGKELEIRTYRAINKEKEFYGILKEYNE 126

Query: 141 TGFFLEKEKR--GEKDMNELQIAISFD 165
               ++ E      +  +   I ++FD
Sbjct: 127 RSVTIDCEGTEMTFQKSDIALIRLAFD 153


>gi|150390439|ref|YP_001320488.1| hypothetical protein Amet_2677 [Alkaliphilus metalliredigens QYMF]
 gi|259585692|sp|A6TRL1|RIMP_ALKMQ RecName: Full=Ribosome maturation factor rimP
 gi|149950301|gb|ABR48829.1| protein of unknown function DUF150 [Alkaliphilus metalliredigens
           QYMF]
          Length = 152

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 82/138 (59%), Gaps = 2/138 (1%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
             +I P++E   F  V I   +E  +  L++++++  G +TL DC+++S+ +S  LD  +
Sbjct: 9   EDLITPIVEAEQFELVDIEFKKEGPHKYLRVYIDKP-GGITLDDCQKVSEGLSKKLDEAD 67

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I  +Y LEVSSPG+DRP+ R+ DFL++ G ++  ++  +   ++ + G+++G  +    
Sbjct: 68  PIVENYFLEVSSPGLDRPLKREVDFLKFKGEMIELKLYEAIDGQKTIEGELVGLIDDKIV 127

Query: 145 LEKEKRGEKDMNELQIAI 162
           ++  +  E +M   ++AI
Sbjct: 128 IKISETEEVEMPREKVAI 145


>gi|239636257|ref|ZP_04677259.1| conserved hypothetical protein [Staphylococcus warneri L37603]
 gi|239597612|gb|EEQ80107.1| conserved hypothetical protein [Staphylococcus warneri L37603]
          Length = 155

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 80/155 (51%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +  +IQPV+++++F  V+I  ++E K+  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   IAEQVEPIIQPVLDDLNFELVEIEYVKEGKDHFLRISIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+  +        H +   + +   ++++ +G +    
Sbjct: 63  MDENDPIPEMYYLDVASPGAERPIKNEKALKDAISHPIFISLYIPIENEKEWLGILKEVK 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    +E +++ +       I I  + +  AR  V
Sbjct: 123 EDIILIEVKEKSKTK----TIEIPRNKIAKARHAV 153


>gi|330685687|gb|EGG97328.1| hypothetical protein SEVCU121_1926 [Staphylococcus epidermidis
           VCU121]
          Length = 155

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 80/155 (51%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +  +IQPV++E+SF  V+I  ++E K+  L+I ++++ G + L DC   S+ IS  
Sbjct: 4   IAEQVEPIIQPVLDELSFELVEIEYVKEGKDHFLRISIDKE-GGVDLNDCTLASEKISEA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I   Y L+V+SPG +RP+  +        H +   + +   ++++ +G +    
Sbjct: 63  MDANDPIPEMYYLDVASPGAERPIKNEKALKNAVSHPIFISLYVPIENEKEWLGILKEVK 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    +E +++ +       I I  + +  AR  V
Sbjct: 123 EDIILIEVKEKSKTK----TIEIPRNKIAKARHAV 153


>gi|150016082|ref|YP_001308336.1| hypothetical protein Cbei_1198 [Clostridium beijerinckii NCIMB
           8052]
 gi|189038629|sp|A6LSQ0|RIMP_CLOB8 RecName: Full=Ribosome maturation factor rimP
 gi|149902547|gb|ABR33380.1| protein of unknown function DUF150 [Clostridium beijerinckii NCIMB
           8052]
          Length = 152

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 81/153 (52%), Gaps = 11/153 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +++P++ E+S     +  ++E     L+I+++++ G ++L DCE +S+ +S I
Sbjct: 6   LIERIEELVRPIVSELSCELYYVEYVKENGEFYLRIYIDKE-GRVSLNDCEAVSRRVSEI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I+  Y LEVSSPG++R + ++  F ++ G  V   +  S    + + G +   S
Sbjct: 65  LDVEDPIKEAYYLEVSSPGLNRGLYKEEHFKKYIGSEVLIRLTSSLNGVKSVKGLLRDVS 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    +E          E +I I  D + +A L
Sbjct: 125 EDSILVE---------GETEIQIPRDKIKAANL 148


>gi|85373512|ref|YP_457574.1| hypothetical protein ELI_03425 [Erythrobacter litoralis HTCC2594]
 gi|122544926|sp|Q2NC14|RIMP_ERYLH RecName: Full=Ribosome maturation factor rimP
 gi|84786595|gb|ABC62777.1| hypothetical protein ELI_03425 [Erythrobacter litoralis HTCC2594]
          Length = 188

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 17/174 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL----EEKNLLLQIFVERD-DGNMTLRDCEELS 73
           M     ++++I+P  + + F  V++ ++     +    LQI  E    G + +  C ELS
Sbjct: 1   MADLARLTALIEPEAKALGFELVRVKMMPSEAGDGGQALQIMAEDPATGQLLIEQCAELS 60

Query: 74  QAISPILDVEN-----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           + +S ++D        +IEG Y LEVSSPGIDRP+ R  DF  W GH     +V      
Sbjct: 61  RKVSDVIDAAEESGEVLIEGAYHLEVSSPGIDRPLTRPKDFADWAGHEAKVSLVEKIDGH 120

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           + + G ++G       +   + GE       ++ + + + SA+L++TD+L+ A+
Sbjct: 121 RNMRGILLGIDGETVTIADNRAGE-------VSFALEQIHSAKLVLTDKLIAAT 167


>gi|293374144|ref|ZP_06620478.1| SP14.3 protein [Turicibacter sanguinis PC909]
 gi|325837436|ref|ZP_08166418.1| hypothetical protein HMPREF9402_1291 [Turicibacter sp. HGF1]
 gi|292647247|gb|EFF65223.1| SP14.3 protein [Turicibacter sanguinis PC909]
 gi|325490968|gb|EGC93266.1| hypothetical protein HMPREF9402_1291 [Turicibacter sp. HGF1]
          Length = 155

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 6/156 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +      +++P+ E  +   V +  ++E  N  L+++V+  +G + +  C ++++A+S 
Sbjct: 3   NIVAKTEELVKPICEANNVELVDVEYVKEGQNFFLRVYVDTPEG-IDIDQCADVAEALSE 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + IE  Y LEVSSPG +RP+  K       G  +  +   +   +++  G ++  
Sbjct: 62  KLDQHDYIEDEYMLEVSSPGAERPLKTKEAVAESIGAYINVKTYKAIDGQKEFEGHLIKF 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            E    LE   +  K +    + I +D     RL +
Sbjct: 122 EEDILTLEVLVKTRKKV----VEIPYDKAAKVRLAI 153


>gi|254519188|ref|ZP_05131244.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226912937|gb|EEH98138.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 152

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   I  +++P+ EE+++    I  ++E     L+I++++ DG + L DCE LS+ +S 
Sbjct: 5   ALLETIDQLVRPIAEELNYEIYHIEYVKENGEYYLRIYIDK-DGGIALSDCEALSRRVSD 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++D ++ I+  Y LEVSSPG++R +     F +  G  +      S   ++ + G +   
Sbjct: 64  VMDEKDPIKEAYFLEVSSPGLNRTLFTDDHFKKQIGKEIMVRFTKSLNGRKNIKGILKEV 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           S+    +E +           I I  D + SA L
Sbjct: 124 SDDSVIVETDDL---------ITIPKDKIKSANL 148


>gi|296285013|ref|ZP_06863011.1| hypothetical protein CbatJ_15405 [Citromicrobium bathyomarinum
           JL354]
          Length = 188

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 19/182 (10%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL----EEKNLLLQIFVERD-DGNMTLRDCEELS 73
           M     ++ +I+P  + + F  V++ ++     +    LQI  E    G + +  C  LS
Sbjct: 1   MADIARLTQIIEPEAQALGFELVRVKMMPSEAGDGTQALQIMAEDPATGQLVIEQCAALS 60

Query: 74  QAISPILDVEN-----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           +A+S  +D        +IEG Y LEVSSPGIDRP+ R  DF  W GH     +      +
Sbjct: 61  RAVSAKIDALEEQGDVLIEGAYHLEVSSPGIDRPLTRTKDFSDWAGHEAKISMAKGYDGQ 120

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNY 186
           +   G + G       +   K G        + +  D + SA+L++TDEL+ A+  L+  
Sbjct: 121 RNYRGSLKGIEGDMVTITDRKAG-------DVELPRDQIHSAQLVLTDELIAATRPLDTT 173

Query: 187 GS 188
           G+
Sbjct: 174 GA 175


>gi|188996514|ref|YP_001930765.1| protein of unknown function DUF150 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|259645122|sp|B2V8D8|RIMP_SULSY RecName: Full=Ribosome maturation factor rimP
 gi|188931581|gb|ACD66211.1| protein of unknown function DUF150 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 147

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 9/154 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   +  ++ P++EE  F+ V I  +  K  +L+I++   +G  ++ DCE +S+ I  
Sbjct: 1   MKVEEKVKELLLPILEERDFKLVDIEFIPSKRPILRIYIYNPEGT-SIDDCEWVSKRIGA 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE++I+  Y LEVSSPG+DR      ++  + G  V  +      +K+   G ++G 
Sbjct: 60  LLDVEDLIDKAYILEVSSPGLDRKFKNIEEYDIFKGRDVVVKTKEPINEKKVFKGTLLGL 119

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +    +          NE  + I F+++   +L
Sbjct: 120 EDEKVKI--------KENEETVEIPFENVSQTKL 145


>gi|259046784|ref|ZP_05737185.1| BCR/YhbC family protein [Granulicatella adiacens ATCC 49175]
 gi|259036552|gb|EEW37807.1| BCR/YhbC family protein [Granulicatella adiacens ATCC 49175]
          Length = 167

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 8/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ + + VI++  F    +  ++E KN  L+ ++++  G + L DC  +S+  S I
Sbjct: 14  VTETVTELTRDVIQKEGFELFDLEFVKEGKNWFLRFYLDKP-GGIDLDDCAFMSEKFSEI 72

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD +  + I   Y LEVSSPG +RP+  + +     G  V      +   ++ L G ++ 
Sbjct: 73  LDAQNPDPIPQAYFLEVSSPGAERPLRNEEELKAAIGSYVHLSFYQNIEGEKFLEGTLLS 132

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    L  + +        +  I   ++  ARL +
Sbjct: 133 VDEETVTLNVQIKTRTK----EFTIERKNIAKARLAI 165


>gi|253581489|ref|ZP_04858714.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
 gi|251836559|gb|EES65094.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
          Length = 159

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
           +    +   I +++ PV+ EM    V I  L++     ++I+VE  +G++TL DC  +S 
Sbjct: 4   YNKENILKKIETIVTPVVNEMKLSLVDIEYLQDGGYWYVRIYVENLEGDITLEDCATISN 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +    D++ +IE  + LEVSSPGI+RP+ +  D++R+ G      +     D +   G 
Sbjct: 64  KVDE--DIDKLIEQRFFLEVSSPGIERPLKKIDDYIRFKGEKAKLSLKHKVNDNKNFEGI 121

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           I+   ++  +LE E       NE  I I F  +  A L+
Sbjct: 122 IIDCRDSIIYLEVE-------NEKIIEIPFSEVRKANLV 153


>gi|149185834|ref|ZP_01864149.1| hypothetical protein ED21_23911 [Erythrobacter sp. SD-21]
 gi|148830395|gb|EDL48831.1| hypothetical protein ED21_23911 [Erythrobacter sp. SD-21]
          Length = 185

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 19/182 (10%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL----EEKNLLLQIFVERD-DGNMTLRDCEELS 73
           M     ++ VI+P  + + F  V++ ++     +  + LQI  E    G + +  C  LS
Sbjct: 1   MADLERLTEVIEPEAQALGFELVRVKMVPSEAGDGGMALQIMAEDPATGQLVIEQCAALS 60

Query: 74  QAISPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           + +S +LD      E ++ G Y LEVSSPGIDRP+ R  DF  W GH     +       
Sbjct: 61  RRVSDMLDQLEEQGEVLVPGAYHLEVSSPGIDRPLTRAKDFENWAGHEAKIALTEKVHGY 120

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNY 186
           + + G++ G       ++     E       ++   + + SA+L++TDEL+ A+  L+  
Sbjct: 121 RTVKGELKGIDGDMVTVDIPGAKE-------VSFPRNLIHSAKLVLTDELIAATQPLDTS 173

Query: 187 GS 188
           G+
Sbjct: 174 GA 175


>gi|229824125|ref|ZP_04450194.1| hypothetical protein GCWU000282_01429 [Catonella morbi ATCC 51271]
 gi|229786479|gb|EEP22593.1| hypothetical protein GCWU000282_01429 [Catonella morbi ATCC 51271]
          Length = 157

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 66/158 (41%), Gaps = 8/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++  I  ++E      V +  ++E K+  L+I+ ++  G + + DC  +S+ IS 
Sbjct: 3   AILDKVTPAITEIVEANGCYLVDMEYVKEGKSWFLRIYADKP-GRIDIDDCAAISEQISE 61

Query: 79  ILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    +     Y LEVSSPG +RP+          G  V  +        +   G + 
Sbjct: 62  HLDSIKPDPFPEAYFLEVSSPGAERPLKTDQALREAIGEYVHLDYYAPQHGAKSHEGTLE 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             ++    L  + +  K     Q+ I   ++  ARL +
Sbjct: 122 AVTDDKVALTVQIKTVKK----QLEIERQAIAKARLAI 155


>gi|119898400|ref|YP_933613.1| hypothetical protein azo2109 [Azoarcus sp. BH72]
 gi|259585699|sp|A1K7C1|RIMP_AZOSB RecName: Full=Ribosome maturation factor rimP
 gi|119670813|emb|CAL94726.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 144

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 83/153 (54%), Gaps = 12/153 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   + ++++ V+  + +  V   L   K  LL++F++ + G +T+ DC  +S  ++ + 
Sbjct: 1   MQAGVENLVEQVVSGLGYELVDFELSP-KGRLLRVFIDIERG-VTVDDCATVSNQLTRVF 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VEN+   + RLEVSSPG+DRP+ + +DF R+ G  +   + L  G+++  +G + G  E
Sbjct: 59  EVENV--DYDRLEVSSPGLDRPLKKLADFERFAGQEIQLRLSLPIGNQRNFVGVLQGVRE 116

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   L  EK         ++   F+ +  ARL+
Sbjct: 117 SSVVLLTEKG--------ELLAPFEEIEKARLV 141


>gi|168180699|ref|ZP_02615363.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|182668569|gb|EDT80548.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
          Length = 153

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+AIS 
Sbjct: 5   SLIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAISE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSPIDKKKKYEGELVDF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    ++ E+          + I  + +  A L
Sbjct: 124 NENEIDIKVEENI--------VTIPREKISKATL 149


>gi|302039406|ref|YP_003799728.1| hypothetical protein NIDE4135 [Candidatus Nitrospira defluvii]
 gi|300607470|emb|CBK43803.1| conserved protein of unknown function DUF150 [Candidatus Nitrospira
           defluvii]
          Length = 159

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   I  +  P+++      V+ + + +    ++++F+++  G +TL DCE+  +++SP
Sbjct: 6   ALNLRIQEIAAPILQSHGLELVEAVCVGQGPRTVIRVFIDKP-GGITLTDCEQAHRSLSP 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDV +     Y LE+SSPG+DRP+    D+ R  G  V  ++      + +L+G ++  
Sbjct: 65  ALDVIDPFPHAYTLEISSPGLDRPLRSVQDYRRLIGKPVTLKLREPIQAQWRLVGAVVEV 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            + G  L  +++   +     I + FD +  AR
Sbjct: 125 DDRGVTLGIQQKKTTE----TIRVEFDQIALAR 153


>gi|162454077|ref|YP_001616444.1| hypothetical protein sce5801 [Sorangium cellulosum 'So ce 56']
 gi|259586198|sp|A9G896|RIMP_SORC5 RecName: Full=Ribosome maturation factor rimP
 gi|161164659|emb|CAN95964.1| hypothetical protein sce5801 [Sorangium cellulosum 'So ce 56']
          Length = 208

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 15/158 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD-----GNMTLRDCEELSQAI 76
           G +   + PV+       V +  + E+    L++ +ER++     G +TL DC ++S+ +
Sbjct: 12  GRVRDAVAPVLASHGVTLVDLEWITERAGWTLRLTIERENADDAGGGVTLEDCADVSRDV 71

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLIGKI 135
           S +LDVE++I  HY LEVSSPG+DR +   ++F R+ G     ++   +   ++ L G++
Sbjct: 72  SSVLDVEDLIPNHYNLEVSSPGLDRRLRTAAEFARFLGRTAKVKLARPAPDGQRLLRGEL 131

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   E    +  + +        +IA+ F  +  ARL+
Sbjct: 132 LEAPEGQVAVLVDGK--------RIAVPFADVAEARLV 161


>gi|225848028|ref|YP_002728191.1| hypothetical protein SULAZ_0194 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|259645121|sp|C1DXS9|RIMP_SULAA RecName: Full=Ribosome maturation factor rimP
 gi|225644280|gb|ACN99330.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 147

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  ++ P++E+   + V I  +  K  +L+I++   +G  ++ DCE +SQ I  
Sbjct: 1   MKLEEKVKELLSPILEDRGLKLVDIEYITGKRPVLRIYIYNPEGT-SIDDCEYVSQRIGS 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILDVE++I+  Y LEVSSPG+DR      ++  + G  V  +      DK+   G + G 
Sbjct: 60  ILDVEDLIKTSYTLEVSSPGLDRKFKNIEEYNIFKGKDVVVKTKEPIEDKKIFKGILEGL 119

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +    L+++         + + I  D +   +L
Sbjct: 120 EDGIVKLKQDN--------IVVEIPLDKISQTKL 145


>gi|157964684|ref|YP_001499508.1| hypothetical protein RMA_0855 [Rickettsia massiliae MTU5]
 gi|157844460|gb|ABV84961.1| hypothetical protein RMA_0855 [Rickettsia massiliae MTU5]
          Length = 164

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V + +      +++I ++  +G  +++ DC + S+ IS I
Sbjct: 7   IEQQITNVIEESLTDMGFELVLVKVKGVNPKVVEILIDSLNGERISVEDCTKASRTISAI 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+   
Sbjct: 67  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAE 126

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 127 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 164


>gi|15605802|ref|NP_213179.1| hypothetical protein aq_260 [Aquifex aeolicus VF5]
 gi|6647906|sp|O66619|RIMP_AQUAE RecName: Full=Ribosome maturation factor rimP
 gi|2982974|gb|AAC06588.1| hypothetical protein aq_260 [Aquifex aeolicus VF5]
          Length = 158

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 83/153 (54%), Gaps = 8/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++PVI  M F+   +    E +  +L+I  +++ G +T++DCEE+S+ +S +
Sbjct: 8   IEKKVKEIVEPVIRGMGFKLFDVEFKPEGRGWVLRIIADKE-GGITIKDCEEISRKVSAL 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+II   Y LE++SPG+ RP+ +   +  + G +V   +      K++++G I    
Sbjct: 67  LDVEDIIPFSYLLEITSPGLTRPLTKVEHYDFFKGRLVKLILKEPIEGKREVVGYIEDVK 126

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                + ++++G+       + I F ++   RL
Sbjct: 127 NGIIDIREKEKGKV------LHIPFSAIAKGRL 153


>gi|254516619|ref|ZP_05128678.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
 gi|219675042|gb|EED31409.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
          Length = 151

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + +++ P +E + F       L + K+ +L++++E ++G + + DC  +S+ +  +L
Sbjct: 5   ENKLQTLLAPTVEALGFELWGTEYLIQGKHSVLRLYIESENG-VQVSDCAAVSEQVGAVL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  I G Y LEVSSPG+DR + R   +  + G  +   +      ++K  G + G  +
Sbjct: 64  DVEEPISGEYLLEVSSPGVDRRLFRLEQYAAYVGEELELRLRSPFEGRRKFKGILRGVED 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               L  +          +  + +  +  A+L +
Sbjct: 124 GDVVLLVDDH--------EYLLPYGDVDRAQLTL 149


>gi|182417563|ref|ZP_02948888.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237668728|ref|ZP_04528712.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182378576|gb|EDT76104.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237657076|gb|EEP54632.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 153

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I ++++P+ EE+S++   +  ++E     L+I++++++G ++L DCE +S+ +S I
Sbjct: 6   LVEKIENIVRPITEELSYKLYYVEYIKENGDFYLRIYIDKEEGRISLNDCEAVSRRVSEI 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ IEG Y LEVSSPG++R +  KS F       V      +    + + G +    
Sbjct: 66  LDVEDPIEGAYYLEVSSPGLNRSLHTKSHFESVLDKEVMVRFNGTIEGVKNIKGILKEVG 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    +E EK          I I  D + SA L
Sbjct: 126 EDYIIVEGEK---------TIKIPNDKIKSANL 149


>gi|56478753|ref|YP_160342.1| hypothetical protein ebA5838 [Aromatoleum aromaticum EbN1]
 gi|81356614|sp|Q5NZS3|RIMP_AZOSE RecName: Full=Ribosome maturation factor rimP
 gi|56314796|emb|CAI09441.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 142

 Score =  154 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 12/150 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++ V+  + F  V       K  L+++F++ + G +T+ DC  +S  ++ + +VE
Sbjct: 2   DVEGLVEQVVSGLGFELVDFE-TSPKGRLMRVFIDIERG-VTVDDCATVSNQLTRVFEVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ + +DF R+ G  V   + +  G+++  IG + G SE   
Sbjct: 60  NV--DYDRLEVSSPGLDRPLKKTADFERFAGDEVQVRLRMPIGNQRNFIGVLEGLSEGVV 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            L  +K          +A  FD +  ARL+
Sbjct: 118 RLHTDKG--------DVAFPFDEIEKARLV 139


>gi|224476388|ref|YP_002633994.1| hypothetical protein Sca_0900 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254807265|sp|B9DPF1|RIMP_STACT RecName: Full=Ribosome maturation factor rimP
 gi|222420995|emb|CAL27809.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 155

 Score =  154 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 6/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I  +IQPV+++++F  V+I   +E K+  L+I ++++ G + L DC   S+ IS +
Sbjct: 4   ITEQIEEIIQPVLDDLNFELVEIEFTKEGKDHFLRISIDKE-GGVDLNDCTLASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           ++ E+ IE  Y L+V+SPG +RP+             V   +       ++ +G +   +
Sbjct: 63  MNEEDPIEQMYYLDVASPGAERPIKTDKALHDAVEQPVFVSLYAPIDGSKEWLGVLQSVT 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    ++ + + +K     ++ I  + +  AR  V
Sbjct: 123 DDHIVIKAQVKEKKK----EVEIPRNKIAKARHAV 153


>gi|312143667|ref|YP_003995113.1| protein of unknown function DUF150 [Halanaerobium sp.
           'sapolanicus']
 gi|311904318|gb|ADQ14759.1| protein of unknown function DUF150 [Halanaerobium sp.
           'sapolanicus']
          Length = 156

 Score =  154 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 81/142 (57%), Gaps = 1/142 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  ++  + P+    +   V +  L+E  + +L++F+E  +G +T+ +CE +S+A+S I
Sbjct: 7   VADLVTEFVLPIAHNENLNLVDVEFLKEGSDWILRVFLENKEGELTIEECERVSRALSVI 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ I+  Y LEVSSPG++RP+  + DF R+ G +++ +       +++ IG +   +
Sbjct: 67  LDEEDPIDKSYILEVSSPGLERPLKTEEDFERFQGELISVKTFKKIDGQKEFIGILKAYN 126

Query: 140 ETGFFLEKEKRGEKDMNELQIA 161
                ++     E D+++  IA
Sbjct: 127 NGQIKIDLRNGKEIDLDDNIIA 148


>gi|222055778|ref|YP_002538140.1| protein of unknown function DUF150 [Geobacter sp. FRC-32]
 gi|254801441|sp|B9M1F7|RIMP_GEOSF RecName: Full=Ribosome maturation factor rimP
 gi|221565067|gb|ACM21039.1| protein of unknown function DUF150 [Geobacter sp. FRC-32]
          Length = 159

 Score =  154 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 14/163 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ + + V+  +    V++    E   L+L++F++++ G +TL DCE +S+
Sbjct: 1   MAKVDVVSRVTELAEQVLSSLGMELVELEYKHEGRELVLRLFIDKE-GGVTLDDCESVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
            +S IL+VE+II GHYR EVSSPG+DRP+ + SD+ ++ G +V      +  D     ++
Sbjct: 60  DLSQILEVEDIITGHYRFEVSSPGLDRPLKKGSDYEKYAGRLVKIRTFEALADDAGNKRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +G++ G  E    +  ++            I  D +  A L
Sbjct: 120 TFLGELKGLKEGQVHIALKE-------GQSAVIPLDKIAKANL 155


>gi|313893703|ref|ZP_07827270.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441717|gb|EFR60142.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 152

 Score =  154 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
            +   +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ +S +
Sbjct: 5   AVEEFVSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEKLSAV 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I  +Y LEVSSPG+DR + +  D +R+NG  V  ++       ++  G + G +
Sbjct: 64  LDEKDPITENYLLEVSSPGLDRVLKKDKDLIRYNGRDVDIQLFKPVNGSKQFTGALQGFT 123

Query: 140 ETGF--FLEKEKRGEKDMNELQIAISFD 165
           +T     +  E    +     QI +  D
Sbjct: 124 DTTIDFTINGESMTFERSAIAQIRLHLD 151


>gi|154497679|ref|ZP_02036057.1| hypothetical protein BACCAP_01655 [Bacteroides capillosus ATCC
           29799]
 gi|150273177|gb|EDN00322.1| hypothetical protein BACCAP_01655 [Bacteroides capillosus ATCC
           29799]
          Length = 151

 Score =  154 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++ QP+  E       +  + E     L+++++++ G + + DCE +S+ +S  
Sbjct: 4   VTELVRALAQPIAAENGCSIWDVEYVREAGTWFLRVYLDKE-GGVNIDDCEAVSRPLSDA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + IEG Y LEVSS GIDR +     F  + G  V   +      ++  +G +    
Sbjct: 63  LDEADPIEGSYTLEVSSAGIDRVLRHPEHFDAFLGAEVEVRLYRPVEGRKDHVGLLKAYD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +         +    +      +   RL V
Sbjct: 123 NGDVTV--------TLPSGDVTFPKKDVAQVRLYV 149


>gi|290969146|ref|ZP_06560671.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780652|gb|EFD93255.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
          Length = 153

 Score =  154 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 66/116 (56%), Gaps = 1/116 (0%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++   + ++   S   V +  + EK+  L++F++++ G + L DC+++S+ +S +LD E+
Sbjct: 13  VTEKAEQLLASTSLELVDVEYVREKDWYLRVFIDKE-GGVDLEDCQQVSEKLSKVLDRED 71

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            I  +Y LEVSSPG+DR + +  DFLR+ G  V          K+  +G+++    
Sbjct: 72  PIRDNYLLEVSSPGLDRILKKDKDFLRYAGRTVDIHFFAPREGKKDWVGELVKKDG 127


>gi|94263058|ref|ZP_01286877.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
 gi|94272102|ref|ZP_01292068.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
 gi|93450238|gb|EAT01519.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
 gi|93456601|gb|EAT06709.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
          Length = 155

 Score =  154 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 10/158 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           D  L+  ++ ++QPV+E+       +    E    +L++ ++ DDG +TL DC  +S+ +
Sbjct: 5   DKALSARLTELLQPVVEDHGLELADLQFRREPAGWVLRLVIDGDDG-VTLDDCTRISREV 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +L+VE+ IE  + LEVSSPG+DRP+ R+ D+ R  G             +  +IG+I 
Sbjct: 64  SHLLEVEDPIEQAFNLEVSSPGLDRPLKREQDYRRCRGRKAKLVCREPIAGEPVVIGEIG 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +E    +  E           +A+    +  ARL++
Sbjct: 124 EMAEQVVTIITE--------AGPVAVPLAQVKRARLVI 153


>gi|227534930|ref|ZP_03964979.1| protein of hypothetical function DUF150 [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227187686|gb|EEI67753.1| protein of hypothetical function DUF150 [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 150

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 74/153 (48%), Gaps = 8/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++++++P++++  F    +  ++E     L++++++  G +TL +C  +S+A+S  LD  
Sbjct: 1   MTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDK-TGGITLDECVMVSEALSEKLDAM 59

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I   Y LEVSSPG +RP+  ++D+ +  G  +   +      K+   G +      
Sbjct: 60  DPDPIPQQYFLEVSSPGAERPLKHETDYEQAVGDYIHVSLFKKLDGKKVFEGTLKELLPD 119

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              L  + +  K        I    + SARL +
Sbjct: 120 QLTLTVKDKSRKFDQ----VIDRQLIASARLAI 148


>gi|254283179|ref|ZP_04958147.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
 gi|219679382|gb|EED35731.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
          Length = 168

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +S ++ P IE + F    + LL   +    +++++R++G +T+ DC  +S+ IS 
Sbjct: 3   GKTTQLSELLTPTIESLGFELWGLELLPPFRKPTFRVYIDREEG-VTVDDCAMVSRHISG 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I+  + LEVSSPGIDR + R   +  + G  +   + +    ++K  G ++G 
Sbjct: 62  VLDVEDPIQTEFTLEVSSPGIDRLLFRPEQYRLYIGEPIEVRLRMPFEGRRKFRGWLVGV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                   +         E +  +  +S+  A++
Sbjct: 122 --------EGDEVVVRAGEHEYVLPLNSVERAKV 147


>gi|254252538|ref|ZP_04945856.1| hypothetical protein BDAG_01771 [Burkholderia dolosa AUO158]
 gi|124895147|gb|EAY69027.1| hypothetical protein BDAG_01771 [Burkholderia dolosa AUO158]
          Length = 152

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++  G ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMLCIYIDQPAG-ISLDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLI 143


>gi|225023297|ref|ZP_03712489.1| hypothetical protein EIKCOROL_00150 [Eikenella corrodens ATCC
           23834]
 gi|224943942|gb|EEG25151.1| hypothetical protein EIKCOROL_00150 [Eikenella corrodens ATCC
           23834]
          Length = 141

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +V++  +  + +  V   L  + +  L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQAVLEKTLPGLGYELVDFELTAQGD--LRVFIDKPEG-ITVEDCATVSNHLSRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++   + RLE+SSPG+DRP+ + +DF+R++G +V  +  L    ++  IG I        
Sbjct: 59  DV--DYKRLEISSPGLDRPLKKAADFIRFSGSLVKLKTRLPVEGQKNFIGHIENFENDVL 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +          AI   ++  A L
Sbjct: 117 TIAFDGK--------TAAIELSNIDRAHL 137


>gi|310778371|ref|YP_003966704.1| protein of unknown function DUF150 [Ilyobacter polytropus DSM 2926]
 gi|309747694|gb|ADO82356.1| protein of unknown function DUF150 [Ilyobacter polytropus DSM 2926]
          Length = 158

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I  +  PV  E     V I  L++     +++++E+ D  +TL DC  +S  I  
Sbjct: 8   AIVEKIWDLTTPVASEFGLDIVDIEYLQDGGYWYVRVYIEKPDAEITLVDCANVSNRIEE 67

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
             DV+ +I+  + LEVSSPGI+RP+  + DF+R+ G      +     D +   G+I   
Sbjct: 68  --DVDALIDKKFFLEVSSPGIERPLKSEKDFIRFVGEKARLILKHKLEDSRNWTGEISSF 125

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +L  + +         + I F  +  A L+
Sbjct: 126 ENGIIYLSTDGKK--------LEIPFSEVKKANLV 152


>gi|218665765|ref|YP_002424885.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|259585659|sp|B7J4D2|RIMP_ACIF2 RecName: Full=Ribosome maturation factor rimP
 gi|218517978|gb|ACK78564.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 150

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 10/139 (7%)

Query: 37  SFRSVQISLLEEKNLL-LQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEV 94
               V   ++     + LQ+F+E+D+   +T+ DC  +S+ +S  LDVEN I G YRLEV
Sbjct: 17  GCTLVDARMVRTGRAVALQVFIEKDETTAVTIEDCAAVSRQLSLWLDVENPIHGAYRLEV 76

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPG+DRP+    DF R+ G      +   +  +++L G+++G  +    L         
Sbjct: 77  SSPGLDRPLKNLHDFERFKGSQAEIHLHGLTQGRRRLQGELLGVEDQKIVL--------K 128

Query: 155 MNELQIAISFDSLLSARLI 173
             E +   + D +  ARL+
Sbjct: 129 NAEGRWTFALDDIHKARLV 147


>gi|198282693|ref|YP_002219014.1| hypothetical protein Lferr_0553 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|259585660|sp|B5EMC8|RIMP_ACIF5 RecName: Full=Ribosome maturation factor rimP
 gi|198247214|gb|ACH82807.1| protein of unknown function DUF150 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 153

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 10/139 (7%)

Query: 37  SFRSVQISLLEEKNLL-LQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEV 94
               V   ++     + LQ+F+E+D+   +T+ DC  +S+ +S  LDVEN I G YRLEV
Sbjct: 20  GCTLVDARMVRTGRAVALQVFIEKDETTAVTIEDCAAVSRQLSLWLDVENPIHGAYRLEV 79

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPG+DRP+    DF R+ G      +   +  +++L G+++G  +    L         
Sbjct: 80  SSPGLDRPLKNLHDFERFKGSQAEIHLHGLTQGRRRLQGELLGVEDQKIVL--------K 131

Query: 155 MNELQIAISFDSLLSARLI 173
             E +   + D +  ARL+
Sbjct: 132 NAEGRWTFALDDIHKARLV 150


>gi|78066109|ref|YP_368878.1| hypothetical protein Bcep18194_A4639 [Burkholderia sp. 383]
 gi|91208362|sp|Q39H32|RIMP_BURS3 RecName: Full=Ribosome maturation factor rimP
 gi|77966854|gb|ABB08234.1| protein of unknown function DUF150 [Burkholderia sp. 383]
          Length = 152

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++  G ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMLCIYIDQPAG-ISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFEG---KKGEAAMLDFTLADIDKARLI 143


>gi|282848826|ref|ZP_06258219.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|294791738|ref|ZP_06756886.1| conserved hypothetical protein [Veillonella sp. 6_1_27]
 gi|294793599|ref|ZP_06758736.1| conserved hypothetical protein [Veillonella sp. 3_1_44]
 gi|282581480|gb|EFB86870.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|294455169|gb|EFG23541.1| conserved hypothetical protein [Veillonella sp. 3_1_44]
 gi|294456968|gb|EFG25330.1| conserved hypothetical protein [Veillonella sp. 6_1_27]
          Length = 152

 Score =  154 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
            +   +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ +S +
Sbjct: 5   AVEEFVSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEKLSAV 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I  +Y LEVSSPG+DR + +  D +R+NG  V  ++       ++  G + G +
Sbjct: 64  LDEKDPITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKPVNGSKQFTGALQGFT 123

Query: 140 ETGF--FLEKEKRGEKDMNELQIAISFD 165
           +T     +  E    +     QI +  D
Sbjct: 124 DTSIDFTINGESITFERSAIAQIRLHLD 151


>gi|134295572|ref|YP_001119307.1| hypothetical protein Bcep1808_1464 [Burkholderia vietnamiensis G4]
 gi|166979856|sp|A4JDW9|RIMP_BURVG RecName: Full=Ribosome maturation factor rimP
 gi|134138729|gb|ABO54472.1| protein of unknown function DUF150 [Burkholderia vietnamiensis G4]
          Length = 152

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++  G ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMLCIYIDQPAG-ISLDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E+          +  +   +  ARLI
Sbjct: 117 GLEFERNK---GEAAMLDFTLADIDKARLI 143


>gi|253997781|ref|YP_003049844.1| hypothetical protein Msip34_0068 [Methylovorus sp. SIP3-4]
 gi|313199845|ref|YP_004038503.1| hypothetical protein MPQ_0074 [Methylovorus sp. MP688]
 gi|253984460|gb|ACT49317.1| protein of unknown function DUF150 [Methylovorus sp. SIP3-4]
 gi|312439161|gb|ADQ83267.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 145

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 81/151 (53%), Gaps = 11/151 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ S+++  + ++ +  V +  +  +  L+++F+++ +G + + DC  +S  +  +L V
Sbjct: 2   QDLYSLLEKSVSQLGYELVDVE-ISNRGKLIRLFIDKPEG-INIDDCVLVSNQLGNVLAV 59

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           EN I  + RLEVSSPG+DR + + +DF+R+ G     ++ +   +++  IG + G  +  
Sbjct: 60  ENDI-DYDRLEVSSPGLDRVLKKDADFIRFTGERAQVKLRIPVDNRKNFIGILQGIEQDN 118

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +E+E         +   ++  ++  ARL 
Sbjct: 119 LLIEQEG--------VLHRLALSNIDKARLA 141


>gi|259586220|sp|A8F225|RIMP_RICM5 RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V + +      +++I ++  +G  +++ DC + S+ IS I
Sbjct: 4   IEQQITNVIEESLTDMGFELVLVKVKGVNPKVVEILIDSLNGERISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|326388031|ref|ZP_08209635.1| hypothetical protein Y88_0399 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207532|gb|EGD58345.1| hypothetical protein Y88_0399 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 197

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 17/175 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-----LEEKNLLLQIFVERDD-GNMTLRDCEEL 72
           M     I  V++P  + + F  V+++L     + ++   LQ+  ER + G + + DC EL
Sbjct: 12  MADIARIIEVVEPEAKALGFDLVRVALFGKTEVGDEEHTLQVMAERPETGQLLIEDCAEL 71

Query: 73  SQAISPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           S+ IS  +D      E++IE  YRLEVSSPGIDRP+ R  DF  W GH    E+      
Sbjct: 72  SRRISDRMDQLEEAGEDLIEDAYRLEVSSPGIDRPLTRPKDFAGWVGHEARIELKDLIDR 131

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +++  G+++G       +  E+      + +  A+ FD +  A+L++TD+L+ AS
Sbjct: 132 RKRYRGELVGFDPATNTISIEE------DAVVYAVPFDLVAHAKLVLTDKLIAAS 180


>gi|325526250|gb|EGD03869.1| ribosome maturation protein RimP [Burkholderia sp. TJI49]
          Length = 152

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L +++++  G ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMLCVYIDQPAG-ISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLI 143


>gi|206559871|ref|YP_002230635.1| hypothetical protein BCAL1505 [Burkholderia cenocepacia J2315]
 gi|226734182|sp|B4E7K9|RIMP_BURCJ RecName: Full=Ribosome maturation factor rimP
 gi|198035912|emb|CAR51804.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 152

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V++        +L I++++  G ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVELE--RTGRGMLCIYIDQPAG-ISLDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFEG---KKGEAAMLDFTLADIDKARLI 143


>gi|238019443|ref|ZP_04599869.1| hypothetical protein VEIDISOL_01312 [Veillonella dispar ATCC 17748]
 gi|237864142|gb|EEP65432.1| hypothetical protein VEIDISOL_01312 [Veillonella dispar ATCC 17748]
          Length = 170

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 3/156 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           E        +   +SSV++ +I       V +  + E++  L++++++  G + L DC+ 
Sbjct: 15  EAMAMKREAVEEFVSSVVEGIIAGTEMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQL 73

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S +LD ++ I  +Y LEVSSPG+DR + +  D +R+NG  V  ++       ++ 
Sbjct: 74  VSEKLSAVLDEKDPITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKPINGSKQF 133

Query: 132 IGKIMGTSETGF--FLEKEKRGEKDMNELQIAISFD 165
            G + G ++T     +  E    +     QI +  D
Sbjct: 134 TGVLEGFTDTTIDFTINGESMTFERSAIAQIRLHLD 169


>gi|87200506|ref|YP_497763.1| hypothetical protein Saro_2493 [Novosphingobium aromaticivorans DSM
           12444]
 gi|123488750|sp|Q2G5E4|RIMP_NOVAD RecName: Full=Ribosome maturation factor rimP
 gi|87136187|gb|ABD26929.1| protein of unknown function DUF150 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 186

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 17/175 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-----LLLQIFVERDD-GNMTLRDCEEL 72
           M     I  V++P  + + F  V++   +          LQI  ER D G + + DC  L
Sbjct: 1   MTDIARIIEVVEPEAKALGFDLVRVRYFKGGEIGDEEHTLQIMAERPDTGQLVIEDCAAL 60

Query: 73  SQAISPILDVEN-----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           S+ +S   D        +IE  YRLEVSSPGIDRP+ R  DF  W GH    E+     +
Sbjct: 61  SRRVSDRFDELEEAGDVLIEDAYRLEVSSPGIDRPLTRAKDFAAWIGHEARVELSELLDN 120

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +++  G++ G       +  E  G      +   + FD + +A+LI+TD+L+ AS
Sbjct: 121 RKRFRGELKGFDAETQAISIEDDG------VVFEVPFDLVSNAKLILTDKLIAAS 169


>gi|170759112|ref|YP_001787733.1| hypothetical protein CLK_1798 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|226695970|sp|B1KWL1|RIMP_CLOBM RecName: Full=Ribosome maturation factor rimP
 gi|169406101|gb|ACA54512.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 153

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P++E +++    I  ++E K   L+I+++ ++G  +L  CE++S+A+S 
Sbjct: 5   NLIENLKKQIEPIVEGLNYELYHIEFVKEGKENYLRIYIDSENGA-SLEGCEKVSRAVSE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIILNLYSPIDKKKKYEGELIDF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    ++ E+          + I  + +    L
Sbjct: 124 NENEINIKVEENI--------VTIPREKISKTTL 149


>gi|297569837|ref|YP_003691181.1| protein of unknown function DUF150 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925752|gb|ADH86562.1| protein of unknown function DUF150 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 155

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 81/159 (50%), Gaps = 10/159 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQA 75
           G+  L   +  +++PV+ +      ++    E    +L++ ++ DDG + L DC  +S+ 
Sbjct: 4   GESALIQRLHELLEPVVLDHGLELAELQFRREAPGWVLRLIIDADDG-VGLDDCTRVSRE 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +L+VE+ IE  + LEVSSPG+DRP+ R+ D++R  G +           +  +IG++
Sbjct: 63  VSHLLEVEDPIEQAFTLEVSSPGLDRPLRRERDYVRCRGKMAKIVCTRQIEGQNVVIGRL 122

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++    +E +           + +   ++  ARL+V
Sbjct: 123 GEVADGAVTVETD--------AGPVKVPLAAVRRARLVV 153


>gi|330816692|ref|YP_004360397.1| hypothetical protein bgla_1g17960 [Burkholderia gladioli BSR3]
 gi|327369085|gb|AEA60441.1| hypothetical protein bgla_1g17960 [Burkholderia gladioli BSR3]
          Length = 153

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 76/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L +++++  G +++ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMLCVYIDQPAG-ISIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G+ ++  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGNEISVTLKKPLEGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLI 143


>gi|161524930|ref|YP_001579942.1| hypothetical protein Bmul_1757 [Burkholderia multivorans ATCC
           17616]
 gi|189350320|ref|YP_001945948.1| hypothetical protein BMULJ_01483 [Burkholderia multivorans ATCC
           17616]
 gi|221197755|ref|ZP_03570801.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
 gi|221204687|ref|ZP_03577704.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221214881|ref|ZP_03587849.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|226734876|sp|A9ABD7|RIMP_BURM1 RecName: Full=Ribosome maturation factor rimP
 gi|160342359|gb|ABX15445.1| protein of unknown function DUF150 [Burkholderia multivorans ATCC
           17616]
 gi|189334342|dbj|BAG43412.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
 gi|221165108|gb|EED97586.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|221175544|gb|EEE07974.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221181687|gb|EEE14088.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
          Length = 152

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L +++++  G ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMLCVYIDQPAG-ISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLI 143


>gi|170754643|ref|YP_001781965.1| hypothetical protein CLD_2218 [Clostridium botulinum B1 str. Okra]
 gi|226701221|sp|B1II53|RIMP_CLOBK RecName: Full=Ribosome maturation factor rimP
 gi|169119855|gb|ACA43691.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
          Length = 153

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+A+S 
Sbjct: 5   SLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAVSE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGELVDF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    ++ E+          + I  + +    L
Sbjct: 124 NENEINIKVEENI--------VTIPREKISKTTL 149


>gi|269797843|ref|YP_003311743.1| hypothetical protein Vpar_0782 [Veillonella parvula DSM 2008]
 gi|269094472|gb|ACZ24463.1| protein of unknown function DUF150 [Veillonella parvula DSM 2008]
          Length = 152

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 78/148 (52%), Gaps = 3/148 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
            +   +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ +S +
Sbjct: 5   AVEEFVSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEKLSAV 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I  +Y LEVSSPG+DR + +  D +R+NG  V  ++  +    ++  G + G +
Sbjct: 64  LDEKDPITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKAINGSKQFTGALQGFT 123

Query: 140 ETGF--FLEKEKRGEKDMNELQIAISFD 165
           +T     +  E    +     QI +  D
Sbjct: 124 DTTIEFTINGESMTFERSTIAQIRLHLD 151


>gi|77359941|ref|YP_339516.1| hypothetical protein PSHAa0995 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874852|emb|CAI86073.1| conserved protein of unknown function (yhbC) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 141

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P +E + F    +  ++  ++  L++++  + G +++ +C + S+ IS ILDVE+ I
Sbjct: 1   MLTPAVEMLGFELHGLEFVQAGRHSTLRVYITHEAG-ISVDNCADASRQISAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DR + ++  + +  G  V     L    ++   G ++  +     L 
Sbjct: 60  TNEYDLEVSSPGVDRLLFKQDHYEQAQGEEVQLRTKLPQDGRRNFKGDLIAVTSDMITLS 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            +          +  I   ++  A +I
Sbjct: 120 SDG--------TEHLIMLSNIERANII 138


>gi|15836838|ref|NP_297526.1| hypothetical protein XF0233 [Xylella fastidiosa 9a5c]
 gi|9105044|gb|AAF83046.1|AE003877_1 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 215

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 13/172 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    L      +L+++++     + +  +++ DCE +S+ +S
Sbjct: 23  EIVNLLAPKVETLGFELLGAEYLLVPSGAILRLYIDTPFAMQPECMVSIDDCERVSREVS 82

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LDVE  I G+Y LEVSSPG+DR +     F R     V   + L     ++L GKI+ 
Sbjct: 83  AYLDVEEPISGNYTLEVSSPGLDRRLFTLEQFARHYNQFVKVGLKLPQHGSRRLQGKIVR 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD-ELLRASLNNYGS 188
                   + +      +N +++A+ F+++  AR++     L  A L     
Sbjct: 143 VE------QVDGFVVLLVNGVELAVDFNNIDKARIVPDWSALGLAPLEKSKP 188


>gi|67923758|ref|ZP_00517222.1| Protein of unknown function DUF150 [Crocosphaera watsonii WH 8501]
 gi|67854385|gb|EAM49680.1| Protein of unknown function DUF150 [Crocosphaera watsonii WH 8501]
          Length = 151

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+ +EM    V +     K   +L++ +    G+ +L DCE++S+A+  I
Sbjct: 5   LIPQIIDLATPIAQEMGLEIVDVVFQTNKRPPVLRVDIRNTIGDTSLNDCEKVSRALESI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+ G Y LE+SSPGI R +  + DF+ + G  V         DK++  G++ G  
Sbjct: 65  LDERAIMPGAYVLEISSPGISRYLSSERDFIAFKGFEVKVTTNPPYMDKKEWQGRLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           E   +L ++ R       +   +    
Sbjct: 125 EKAVYLNRKGRAIAVPCSVITQVQLAD 151


>gi|237757009|ref|ZP_04585464.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237690827|gb|EEP59980.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 147

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   +  ++ P++EE  F+ V I  +  K  +L+I++   +G  ++ DCE +S+ I  
Sbjct: 1   MKVEEKVKELLLPILEERDFKLVDIEFIPSKRPILRIYIYNPEGT-SIDDCEWVSKRIGA 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE++I+  Y LEVSSPG+DR      ++  + G  V  +      +K+   G ++G 
Sbjct: 60  LLDVEDLIDKAYILEVSSPGLDRKFKNIEEYDIFKGRDVVIKTKEPINEKKVFKGTLLGL 119

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +    +          NE  + I  +++   +L
Sbjct: 120 EDEKVKI--------KENEETVEIPLENVSQTKL 145


>gi|294085150|ref|YP_003551910.1| hypothetical protein SAR116_1583 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664725|gb|ADE39826.1| hypothetical protein SAR116_1583 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 177

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 84/155 (54%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE--KNLLLQIFVER-DDGNMTLRDCEELSQAIS 77
           +   +S +I+  +E++ F+ V++  +        LQI  E  +D  MT+ DC++LS+ I+
Sbjct: 13  VETKVSKIIEAAVEDLGFQLVRVLFMGGNSGRNQLQIMAEPVEDREMTVEDCKKLSRHIA 72

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ +  D+ R+ G +    + +    +++  G++ G
Sbjct: 73  ALLDVEDPISSAYVLEVSSPGIDRPLTKIEDYERFEGELAKINLRMMRDGRRRFNGRLNG 132

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +       E +   +    + A +FD + SAR+
Sbjct: 133 FDD-------EGKIVLETTFGRFAFAFDEIDSARI 160


>gi|116624261|ref|YP_826417.1| hypothetical protein Acid_5179 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227423|gb|ABJ86132.1| protein of unknown function DUF150 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 174

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 9/154 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  V Q V +      V++ +    +  L++I +++ +G +T  DC+ +S  +  
Sbjct: 25  AVTSKVEEVAQRVAQSEGLELVEVEVKGGGSARLVRISIDKPEG-VTHADCQTVSDKVGE 83

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           IL+ E+ I GHY LEVSSPG++R +++  D+ R++G      +      ++   G + G 
Sbjct: 84  ILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQRFHGQKAKITVREEVDGRRTWEGTLAGF 143

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++    LE               + FD +  A L
Sbjct: 144 ADGVISLEV-------APGEIRRLPFDQVKKANL 170


>gi|167587340|ref|ZP_02379728.1| hypothetical protein BuboB_18484 [Burkholderia ubonensis Bu]
          Length = 152

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++  G ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMLCIYIDQPAG-ISLDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G   +  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEASVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E+          +  +   +  ARLI
Sbjct: 117 GLEFERNK---GEAAMLDFTLADIDKARLI 143


>gi|238027586|ref|YP_002911817.1| hypothetical protein bglu_1g20040 [Burkholderia glumae BGR1]
 gi|237876780|gb|ACR29113.1| Hypothetical protein bglu_1g20040 [Burkholderia glumae BGR1]
          Length = 153

 Score =  152 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L +++++  G +++ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMLCVYIDQPAG-ISIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  ++  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEISVTLKKPLEGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFE---MKKGEAAMLDFTLADIDKARLI 143


>gi|126657164|ref|ZP_01728330.1| hypothetical protein CY0110_24586 [Cyanothece sp. CCY0110]
 gi|126621435|gb|EAZ92146.1| hypothetical protein CY0110_24586 [Cyanothece sp. CCY0110]
          Length = 151

 Score =  152 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+++EM    V++     K   +L++ +   D + +L DCE++S+A+  +
Sbjct: 5   LIPQIIDLATPIVQEMGLDVVEVVFQTNKRPPVLRVDIRNPDSDTSLNDCEQVSRALEAV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+ G Y LE+SSPGI R +  + DF+ + G  V         DK++  G++ G  
Sbjct: 65  LDETAIMPGAYVLEISSPGISRYLSDERDFVAFKGFEVNVTTNPPYKDKKEWQGRLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   +L ++ R         IAI    +   +L 
Sbjct: 125 DKAVYLNRKGRA--------IAIPCSVITQVQLA 150


>gi|237746614|ref|ZP_04577094.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229377965|gb|EEO28056.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 182

 Score =  152 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 14/157 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISPI 79
           +  +++  +    +  V +        +L+++++        GN+T+ DCE++S+ +S +
Sbjct: 22  LQELVEKTVNGCGYDLVDLE--RASGGILRVYIDFLPEASSRGNITVDDCEKVSRQLSHV 79

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS---GDKQKLIGKIM 136
           L VE++   + RLEVSSPG+DRP+ +  DF+R+ G      +       G+++   G ++
Sbjct: 80  LTVEDV--DYDRLEVSSPGLDRPLKKWQDFVRFAGMEAHVRLRKPVTGMGNRKSFQGILL 137

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                   LE E    +  + L   I    +  ARL+
Sbjct: 138 PPEGDELALEFEGNDSESSSVLHFTI--TDIDKARLV 172


>gi|107022572|ref|YP_620899.1| hypothetical protein Bcen_1018 [Burkholderia cenocepacia AU 1054]
 gi|116689520|ref|YP_835143.1| hypothetical protein Bcen2424_1498 [Burkholderia cenocepacia
           HI2424]
 gi|170732824|ref|YP_001764771.1| hypothetical protein Bcenmc03_1474 [Burkholderia cenocepacia MC0-3]
 gi|254245587|ref|ZP_04938908.1| hypothetical protein BCPG_00296 [Burkholderia cenocepacia PC184]
 gi|122978973|sp|Q1BWS9|RIMP_BURCA RecName: Full=Ribosome maturation factor rimP
 gi|166979874|sp|A0K6X3|RIMP_BURCH RecName: Full=Ribosome maturation factor rimP
 gi|226734185|sp|B1K0L8|RIMP_BURCC RecName: Full=Ribosome maturation factor rimP
 gi|105892761|gb|ABF75926.1| protein of unknown function DUF150 [Burkholderia cenocepacia AU
           1054]
 gi|116647609|gb|ABK08250.1| protein of unknown function DUF150 [Burkholderia cenocepacia
           HI2424]
 gi|124870363|gb|EAY62079.1| hypothetical protein BCPG_00296 [Burkholderia cenocepacia PC184]
 gi|169816066|gb|ACA90649.1| protein of unknown function DUF150 [Burkholderia cenocepacia MC0-3]
          Length = 152

 Score =  152 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V++        +L I++++  G ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVELE--RTGRGMLCIYIDQPAG-ISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFEG---KKGEAAMLDFTLADIDKARLI 143


>gi|167772659|ref|ZP_02444712.1| hypothetical protein ANACOL_04040 [Anaerotruncus colihominis DSM
           17241]
 gi|167665137|gb|EDS09267.1| hypothetical protein ANACOL_04040 [Anaerotruncus colihominis DSM
           17241]
          Length = 159

 Score =  152 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 64/138 (46%), Gaps = 2/138 (1%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
            ++  PV + M      ++  +E     L+ +++R+ G +T+ +CE  S+ +S +LD  +
Sbjct: 16  EALAAPVAQRMGLYLWDVAFEKEGAGWYLRYYIDRE-GGVTIDECEAFSREVSDLLDEAD 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I+  Y LEV SPG++R + +   F ++ G  V   ++     ++  +G +         
Sbjct: 75  PIDQSYTLEVGSPGVERKLTKDWHFQKYIGAQVHVRLIRPVEGERDFVGALSSYENGVVA 134

Query: 145 LEKEKRGEKDMNELQIAI 162
           +  +   E   +  + A 
Sbjct: 135 VLLDDELEMTFSPGETAF 152


>gi|227499046|ref|ZP_03929183.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904495|gb|EEH90413.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 153

 Score =  152 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   +S +  P+ E      V +  + E++  L+++++++ G + + DC  +S  +  +L
Sbjct: 6   IVEQVSELALPICEACGVELVDVEYVRERDWYLRVYIDKE-GGIDIDDCTAVSGDLEKVL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D +++I+  Y LEVSSPGIDRP+ + SD++   G  +          K+    +++   E
Sbjct: 65  DEKDVIKEQYYLEVSSPGIDRPLKKDSDYVDHYGKKIDVSFYAPFEGKKVQTYELVSHDE 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
               +       K+  + ++ +    + S R
Sbjct: 125 AHLVV-------KNFKKQKVTLERSLISSVR 148


>gi|294788743|ref|ZP_06753984.1| 15 kDa protein [Simonsiella muelleri ATCC 29453]
 gi|294483225|gb|EFG30911.1| 15 kDa protein [Simonsiella muelleri ATCC 29453]
          Length = 145

 Score =  152 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 11/149 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +++   +  + +  V   L  +    L++F++ + G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILDTTLPGLGYELVDFELTAQG--TLRVFIDTE-GGITVEDCANVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   +  LE+SSPG+DRP+ + SDF+R++G +V  +  L    ++  IGKI    E   
Sbjct: 59  NV--DYKNLEISSPGLDRPLKKASDFVRFSGSLVKIKTRLPIDGQKNFIGKIDAFDENTQ 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +          +   + I   ++  AR+
Sbjct: 117 IITL------AFDGKAVQIELSNVDKARI 139


>gi|261407940|ref|YP_003244181.1| hypothetical protein GYMC10_4147 [Paenibacillus sp. Y412MC10]
 gi|329929353|ref|ZP_08283106.1| hypothetical protein HMPREF9412_5355 [Paenibacillus sp. HGF5]
 gi|261284403|gb|ACX66374.1| protein of unknown function DUF150 [Paenibacillus sp. Y412MC10]
 gi|328936722|gb|EGG33165.1| hypothetical protein HMPREF9412_5355 [Paenibacillus sp. HGF5]
          Length = 153

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++QP ++E  F  V +  ++E  N  L++FV++D   + + DC  +S+ +S  
Sbjct: 6   IKTTVEEMVQPYLDEHGFELVDVEYVKEGSNWFLRVFVDKDG-GIDIDDCGLISEHLSQK 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LEVSSPG +RP+ +K D  +  G  V   +       ++  GK+    
Sbjct: 65  LDENDPIPTAYFLEVSSPGAERPLKKKEDVAKSVGKNVFVTVYEPINGLKEFEGKLESFD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                ++  K+        Q  I +  + SARL +
Sbjct: 125 NEELVIQTAKK--------QHVIPYAKVASARLAI 151


>gi|172036757|ref|YP_001803258.1| hypothetical protein cce_1842 [Cyanothece sp. ATCC 51142]
 gi|259585745|sp|B1WZP0|RIMP_CYAA5 RecName: Full=Ribosome maturation factor rimP
 gi|171698211|gb|ACB51192.1| DUF150-containing protein [Cyanothece sp. ATCC 51142]
          Length = 151

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P++EEM    V++     K   +L++ +     + +L DCE++S+A+  +
Sbjct: 5   LIPQIIDLATPIVEEMGLDVVEVVFQTNKRPPVLRVDIRNPASDTSLNDCEQVSRALEAV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+ G Y LE+SSPGI R +  + DF+ + G  V         DK++  G++ G  
Sbjct: 65  LDETAIMPGAYVLEISSPGISRYLNSERDFIAFKGFEVNIATNPPYKDKKEWRGRLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           E   +L ++ R         IAI    +   +L 
Sbjct: 125 EKAVYLNRKGRA--------IAIPCAVITKVQLA 150


>gi|260887248|ref|ZP_05898511.1| putative cytoplasmic protein [Selenomonas sputigena ATCC 35185]
 gi|330838994|ref|YP_004413574.1| Ribosome maturation factor rimP [Selenomonas sputigena ATCC 35185]
 gi|260863310|gb|EEX77810.1| putative cytoplasmic protein [Selenomonas sputigena ATCC 35185]
 gi|329746758|gb|AEC00115.1| Ribosome maturation factor rimP [Selenomonas sputigena ATCC 35185]
          Length = 150

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 75/152 (49%), Gaps = 10/152 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   + +++Q ++++ +   V +  ++E++  L+++++++ G + + DC+ +S+ +  IL
Sbjct: 5   IEEAVEAIVQEIVQDSNLEVVDVEYVKERDWYLRVYLDKE-GGIEIDDCQRVSETLEQIL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++++   Y LEVSSPG+DR + +  DF R  G  V          K+  +G + G   
Sbjct: 64  DEKDLLTEAYILEVSSPGLDRVLKKARDFEREQGKAVDVTFYAPVDGKKTWVGTLTGYDP 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +  +   E         +  + +   RL
Sbjct: 124 GKNAIVLDGEKE---------LPLEKIAQVRL 146


>gi|56460078|ref|YP_155359.1| alpha-hemolysin-like HlyA family protein [Idiomarina loihiensis
           L2TR]
 gi|81362146|sp|Q5QTY6|RIMP_IDILO RecName: Full=Ribosome maturation factor rimP
 gi|56179088|gb|AAV81810.1| Alpha-hemolysin-like protein, hlyA family [Idiomarina loihiensis
           L2TR]
          Length = 152

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 75/155 (48%), Gaps = 10/155 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +I+P +E + F    +  +       L+++++  +G +++ +C ++S  +S 
Sbjct: 3   NLQERLTDIIRPAVEALEFELWGVEFIRAGKFSTLRVYIDHPEG-ISVDNCADVSYQVSS 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I   Y LEVSSPG++RP         +    VA E+V +  +K+K   +++  
Sbjct: 62  LLDVEDPINVEYNLEVSSPGMERPFFNAQQMQPYINETVAFELVAAQKNKRKFKAELIAV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 L         ++   + ++   + +A L+
Sbjct: 122 EGEELTL--------AVDNDTLQVNMRDVKNAHLV 148


>gi|157828687|ref|YP_001494929.1| hypothetical protein A1G_04605 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933406|ref|YP_001650195.1| ribosome maturation protein RimP [Rickettsia rickettsii str. Iowa]
 gi|167012960|sp|A8GSP6|RIMP_RICRS RecName: Full=Ribosome maturation factor rimP
 gi|189040651|sp|B0BY63|RIMP_RICRO RecName: Full=Ribosome maturation factor rimP
 gi|157801168|gb|ABV76421.1| hypothetical protein A1G_04605 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908493|gb|ABY72789.1| hypothetical cytosolic protein [Rickettsia rickettsii str. Iowa]
          Length = 161

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +   +++ DC + S+ IS I
Sbjct: 4   IEQQITNVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNSEKVSVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|168184628|ref|ZP_02619292.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|237795858|ref|YP_002863410.1| hypothetical protein CLJ_B2647 [Clostridium botulinum Ba4 str. 657]
 gi|259585740|sp|C3L0C0|RIMP_CLOB6 RecName: Full=Ribosome maturation factor rimP
 gi|182672272|gb|EDT84233.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|229262492|gb|ACQ53525.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
          Length = 153

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 81/154 (52%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P++E +++    I  ++E K   L+I+++ ++G ++L  CE++S+A+S 
Sbjct: 5   SLIENLKKQIEPIVEGLNYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAVSE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +  S   K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSSIDKKKKYEGELVDF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    ++ E+          + I  + +    L
Sbjct: 124 NENEINIKVEENI--------VTIPREKISKTTL 149


>gi|296185353|ref|ZP_06853763.1| hypothetical protein CLCAR_0776 [Clostridium carboxidivorans P7]
 gi|296050187|gb|EFG89611.1| hypothetical protein CLCAR_0776 [Clostridium carboxidivorans P7]
          Length = 155

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 89/153 (58%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +++++++P++ E+++    + L+ E K+  L+I++++++  ++L+DCE++S+A+S +
Sbjct: 7   LIDELTNLVKPIVTELNYDLYYLELVREGKDNYLRIYIDKENEGISLQDCEKVSRAVSEM 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV++ I+  Y LEVSSPGI+R +       ++ G+ V   I      K+K  G+++  +
Sbjct: 67  LDVKDPIKEGYYLEVSSPGIERILHTDEHLQKYTGNDVVVNISGLLNGKKKYEGQLVNFN 126

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                ++ E          +I+I  + + +  L
Sbjct: 127 NEELNIKVEDE--------EISIPREKISTVNL 151


>gi|15892741|ref|NP_360455.1| hypothetical protein RC0818 [Rickettsia conorii str. Malish 7]
 gi|34222951|sp|Q92HF3|RIMP_RICCN RecName: Full=Ribosome maturation factor rimP
 gi|15619918|gb|AAL03356.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 161

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +   +++ DC + S+ IS I
Sbjct: 4   IEQQIANVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNSEKISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|322806688|emb|CBZ04257.1| clustered with transcription termination protein NusA [Clostridium
           botulinum H04402 065]
          Length = 153

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+A+S 
Sbjct: 5   SLIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAVSE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSPIDKKKKYEGELVDF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    ++ E+          + I  + +    L
Sbjct: 124 NENEIDIKVEENI--------VTIPREKISKTTL 149


>gi|329891252|ref|ZP_08269595.1| hypothetical protein BDIM_29650 [Brevundimonas diminuta ATCC 11568]
 gi|328846553|gb|EGF96117.1| hypothetical protein BDIM_29650 [Brevundimonas diminuta ATCC 11568]
          Length = 198

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 8/168 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           +  +I PV E +    V++ L+       LQI  ER  D ++++ +C  LS+A+S +LD 
Sbjct: 11  LLELIDPVAESLGLAVVRVRLMGGTLRRRLQIMAERQTDHDISVEECARLSRAVSEVLDA 70

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I G Y LEVSSPGIDRP+ R  DF  + G     E       +++  G + GT    
Sbjct: 71  ADPISGEYLLEVSSPGIDRPLTRLIDFDLFEGLEARLETDRMVEGRKRFKGVVAGTEGEN 130

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
             ++ +   E  +      I F  L  A+L++TDELL+       +  
Sbjct: 131 IAIDLDGEDETAL------IPFAWLADAKLVLTDELLKRGAALRAARG 172


>gi|259016311|sp|Q7NFN6|RIMP_GLOVI RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++++ +PV E++  + V ++     K   L++ +        L DCE++S+A+  
Sbjct: 5   DIVEQVTALAEPVAEQLGLQLVAVAYQTHTKPATLRVDIRHPTEGTGLDDCEKMSRALEA 64

Query: 79  ILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +LD  +++I G Y LEVSSPG++R +    +F+ + G  V  +       K++  G+++ 
Sbjct: 65  LLDTRDDLIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFGPVDGKKQWEGRLLE 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 +L    R        ++A+    +   +L+
Sbjct: 125 RDGENVYLTIAGR--------RVALPRPQVARVQLV 152


>gi|255524232|ref|ZP_05391191.1| protein of unknown function DUF150 [Clostridium carboxidivorans P7]
 gi|255512057|gb|EET88338.1| protein of unknown function DUF150 [Clostridium carboxidivorans P7]
          Length = 154

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 89/153 (58%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +++++++P++ E+++    + L+ E K+  L+I++++++  ++L+DCE++S+A+S +
Sbjct: 6   LIDELTNLVKPIVTELNYDLYYLELVREGKDNYLRIYIDKENEGISLQDCEKVSRAVSEM 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV++ I+  Y LEVSSPGI+R +       ++ G+ V   I      K+K  G+++  +
Sbjct: 66  LDVKDPIKEGYYLEVSSPGIERILHTDEHLQKYTGNDVVVNISGLLNGKKKYEGQLVNFN 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                ++ E          +I+I  + + +  L
Sbjct: 126 NEELNIKVEDE--------EISIPREKISTVNL 150


>gi|242278480|ref|YP_002990609.1| hypothetical protein Desal_1005 [Desulfovibrio salexigens DSM 2638]
 gi|259585762|sp|C6C0D6|RIMP_DESAD RecName: Full=Ribosome maturation factor rimP
 gi|242121374|gb|ACS79070.1| protein of unknown function DUF150 [Desulfovibrio salexigens DSM
           2638]
          Length = 155

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 7/154 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
            LA  +S  ++P IE M      + +       + I+++ ++G +++  C E+S+ +  +
Sbjct: 5   SLAKKVSQFVEPTIESMGLTLWGVEVTSANRPAVIIYIDSENG-VSIDQCAEVSRDVGLM 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+VE +I+  Y LEVSSPG++R   +      + G  +   +V S   ++K  G +  T 
Sbjct: 64  LEVEEVIDSAYVLEVSSPGLERKFFKPEQMSAYVGKKIDIALVFSLEGRKKFKGLLQETD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           E G  L+ E +      E  I I +D +  A+LI
Sbjct: 124 EEGLLLKLEDQ------EDPIKIEWDRIKKAKLI 151


>gi|53719534|ref|YP_108520.1| hypothetical protein BPSL1920 [Burkholderia pseudomallei K96243]
 gi|53724823|ref|YP_102762.1| hypothetical protein BMA1063 [Burkholderia mallei ATCC 23344]
 gi|67641343|ref|ZP_00440123.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|83720636|ref|YP_443083.1| hypothetical protein BTH_I2566 [Burkholderia thailandensis E264]
 gi|121601076|ref|YP_992839.1| hypothetical protein BMASAVP1_A1509 [Burkholderia mallei SAVP1]
 gi|124386071|ref|YP_001026182.1| hypothetical protein BMA10229_A0177 [Burkholderia mallei NCTC
           10229]
 gi|126439674|ref|YP_001058777.1| hypothetical protein BURPS668_1738 [Burkholderia pseudomallei 668]
 gi|126448900|ref|YP_001080548.1| hypothetical protein BMA10247_0989 [Burkholderia mallei NCTC 10247]
 gi|126452322|ref|YP_001066029.1| hypothetical protein BURPS1106A_1760 [Burkholderia pseudomallei
           1106a]
 gi|134282401|ref|ZP_01769106.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
 gi|167004350|ref|ZP_02270108.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
 gi|167562941|ref|ZP_02355857.1| hypothetical protein BoklE_10300 [Burkholderia oklahomensis EO147]
 gi|167582088|ref|ZP_02374962.1| hypothetical protein BthaT_28352 [Burkholderia thailandensis TXDOH]
 gi|167620249|ref|ZP_02388880.1| hypothetical protein BthaB_28340 [Burkholderia thailandensis Bt4]
 gi|167719820|ref|ZP_02403056.1| hypothetical protein BpseD_12440 [Burkholderia pseudomallei DM98]
 gi|167738821|ref|ZP_02411595.1| hypothetical protein Bpse14_12188 [Burkholderia pseudomallei 14]
 gi|167816042|ref|ZP_02447722.1| hypothetical protein Bpse9_12932 [Burkholderia pseudomallei 91]
 gi|167824418|ref|ZP_02455889.1| hypothetical protein Bpseu9_12158 [Burkholderia pseudomallei 9]
 gi|167836823|ref|ZP_02463706.1| hypothetical protein Bpse38_10070 [Burkholderia thailandensis
           MSMB43]
 gi|167845950|ref|ZP_02471458.1| hypothetical protein BpseB_11725 [Burkholderia pseudomallei B7210]
 gi|167894527|ref|ZP_02481929.1| hypothetical protein Bpse7_12319 [Burkholderia pseudomallei 7894]
 gi|167902932|ref|ZP_02490137.1| hypothetical protein BpseN_11790 [Burkholderia pseudomallei NCTC
           13177]
 gi|167919192|ref|ZP_02506283.1| hypothetical protein BpseBC_11610 [Burkholderia pseudomallei
           BCC215]
 gi|217423492|ref|ZP_03454993.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|226199708|ref|ZP_03795261.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|237812040|ref|YP_002896491.1| hypothetical protein GBP346_A1782 [Burkholderia pseudomallei
           MSHR346]
 gi|242317839|ref|ZP_04816855.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|254178698|ref|ZP_04885353.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|254179982|ref|ZP_04886581.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|254188606|ref|ZP_04895117.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254197760|ref|ZP_04904182.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
 gi|254199710|ref|ZP_04906076.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|254206032|ref|ZP_04912384.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|254297817|ref|ZP_04965270.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
 gi|254358406|ref|ZP_04974679.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|257139312|ref|ZP_05587574.1| hypothetical protein BthaA_08929 [Burkholderia thailandensis E264]
 gi|81379645|sp|Q63TP6|RIMP_BURPS RecName: Full=Ribosome maturation factor rimP
 gi|81605125|sp|Q62KK7|RIMP_BURMA RecName: Full=Ribosome maturation factor rimP
 gi|123536573|sp|Q2SVG6|RIMP_BURTA RecName: Full=Ribosome maturation factor rimP
 gi|166980214|sp|A3N8V6|RIMP_BURP6 RecName: Full=Ribosome maturation factor rimP
 gi|166980223|sp|A3NUK8|RIMP_BURP0 RecName: Full=Ribosome maturation factor rimP
 gi|166987486|sp|A2S2L3|RIMP_BURM9 RecName: Full=Ribosome maturation factor rimP
 gi|166990761|sp|A1V3N6|RIMP_BURMS RecName: Full=Ribosome maturation factor rimP
 gi|166990846|sp|A3MJW2|RIMP_BURM7 RecName: Full=Ribosome maturation factor rimP
 gi|52209948|emb|CAH35920.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52428246|gb|AAU48839.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
 gi|83654461|gb|ABC38524.1| Uncharacterized BCR, YhbC family COG0779 superfamily [Burkholderia
           thailandensis E264]
 gi|121229886|gb|ABM52404.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|124294091|gb|ABN03360.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
 gi|126219167|gb|ABN82673.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
 gi|126225964|gb|ABN89504.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
 gi|126241770|gb|ABO04863.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
 gi|134246439|gb|EBA46528.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
 gi|147749306|gb|EDK56380.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|147753475|gb|EDK60540.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|148027533|gb|EDK85554.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|157806885|gb|EDO84055.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
 gi|157936285|gb|EDO91955.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|160699737|gb|EDP89707.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|169654501|gb|EDS87194.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
 gi|184210522|gb|EDU07565.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|217393350|gb|EEC33371.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|225928294|gb|EEH24328.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|237503609|gb|ACQ95927.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
 gi|238522260|gb|EEP85705.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|242141078|gb|EES27480.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|243060318|gb|EES42504.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
          Length = 153

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        ++ +++++  G +T+ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMVCVYIDQPAG-ITIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLI 143


>gi|206889666|ref|YP_002248540.1| YlxS [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|259645127|sp|B5YJX5|RIMP_THEYD RecName: Full=Ribosome maturation factor rimP
 gi|206741604|gb|ACI20661.1| YlxS [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 164

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 6/159 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I+     V E+     V +      K L L+IF++++ G +T++DCE  S+AI  I
Sbjct: 6   LKDKITDYANIVGEQEGVEIVNVEIYPGGKGLTLRIFIDKE-GGVTIKDCENFSRAIEAI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I+  Y LEVSSPGIDRP+  K DFLR  G  V         D    IGKI+   
Sbjct: 65  LDVEDPIKSSYTLEVSSPGIDRPLKNKKDFLRNIGRDVKITTKEKIADNTFFIGKIVDVG 124

Query: 140 ETGFFLEKEKRGEKDMNELQIA----ISFDSLLSARLIV 174
           +    +E ++   K   +        I F+ ++ A++ +
Sbjct: 125 DDWVRIEIQETKIKGSKKKGKTELLFIPFNKIIKAQVYL 163


>gi|160892798|ref|ZP_02073588.1| hypothetical protein CLOL250_00329 [Clostridium sp. L2-50]
 gi|156865839|gb|EDO59270.1| hypothetical protein CLOL250_00329 [Clostridium sp. L2-50]
          Length = 142

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 74/135 (54%), Gaps = 2/135 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P+IE  +   V +  ++E  +  L+I+ +++ G +T+ DCE +++A+S +LD ++ I
Sbjct: 1   MVLPIIEANNLELVDVEYVKEGSDYYLRIYADKE-GGITIGDCEIVNRAMSDLLDADDFI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           +  Y LEVSSPG+ RP+ +++DF R  G +V  +      + +   G++    E    + 
Sbjct: 60  KDAYILEVSSPGLTRPLKKENDFKRSIGKIVEIKTYTKIDNCKDFEGELTAYDEETVTIL 119

Query: 147 KEKRGEKDMNELQIA 161
            E   E  +    I+
Sbjct: 120 TEDEKELKIARKDIS 134


>gi|91774421|ref|YP_544177.1| hypothetical protein Mfla_0065 [Methylobacillus flagellatus KT]
 gi|122399243|sp|Q1GXD8|RIMP_METFK RecName: Full=Ribosome maturation factor rimP
 gi|91708408|gb|ABE48336.1| protein of unknown function DUF150 [Methylobacillus flagellatus KT]
          Length = 144

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 82/150 (54%), Gaps = 11/150 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D++++++  + ++ +  V + L   +  L+++F+++ +G + + DC  +S  +S +L V
Sbjct: 2   QDLNALLERSLGQLGYELVDMELAN-RGKLIRLFIDKPEG-INIDDCVLVSNHLSNLLAV 59

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I  + RLE+SSPG+DR + + SDF+R+ G     ++ +    ++  +G + G  +  
Sbjct: 60  EHDI-DYDRLEISSPGLDRVLKKTSDFVRFAGERAQVKLRMPIEGRKNFLGILRGVDQEY 118

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             LE +         ++  + F ++  ARL
Sbjct: 119 LVLECDG--------VEQRVPFSNIDKARL 140


>gi|113868283|ref|YP_726772.1| hypothetical protein H16_A2308 [Ralstonia eutropha H16]
 gi|123032887|sp|Q0K9B7|RIMP_RALEH RecName: Full=Ribosome maturation factor rimP
 gi|113527059|emb|CAJ93404.1| conserved hypothetical protein [Ralstonia eutropha H16]
          Length = 162

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 12/153 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S+ ++ +  VEN
Sbjct: 3   LADLIETTLSGMGYELVELERAPAG--LLRVYIDQPETGIAIEDCEKVSRQLTHVFTVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM----GTSE 140
           +   + RLEVSSPG+DRP+ + +D++R+ G      + L    ++   G +        E
Sbjct: 61  V--DYERLEVSSPGLDRPLKKLADYVRFAGEEARVTLRLPVNGQKNFTGILREPTGAAGE 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               LE E +    + E  +      +  ARL+
Sbjct: 119 EKIGLEFEGKDGPALLEFAV----SDVDKARLV 147


>gi|298528713|ref|ZP_07016117.1| protein of unknown function DUF150 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512365|gb|EFI36267.1| protein of unknown function DUF150 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 154

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 11/156 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL---LLQIFVERDDGNMTLRDCEELSQAIS 77
           +   +  ++Q     M      +  +        +L++FV+  +G +++  C +LS+ +S
Sbjct: 6   IKKQVEELVQTNCRLMGLEPWGMDFVPGTGKQRGVLRVFVDSPEG-VSIDQCADLSRQLS 64

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LDVE+++ G Y LEVSSPG++R   R      + GH V   +      ++   G +  
Sbjct: 65  VALDVEDLVPGSYNLEVSSPGLNRRFFRPEQMSGYTGHKVKITLKEPRDGRKNFTGTLQE 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  ++          +   +  +D +  ARL+
Sbjct: 125 AENETISIQT-------SPDCTWSFQWDEIDRARLV 153


>gi|116748666|ref|YP_845353.1| hypothetical protein Sfum_1226 [Syntrophobacter fumaroxidans MPOB]
 gi|259645123|sp|A0LHL6|RIMP_SYNFM RecName: Full=Ribosome maturation factor rimP
 gi|116697730|gb|ABK16918.1| protein of unknown function DUF150 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 168

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + +PVI       ++I    E    +L++FV+++ G +++ DC  +S+ +  +
Sbjct: 17  IVRQVWDLTEPVIRAEGMEIIEIEYRRESPGWVLRVFVDQE-GGVSVDDCARISRVVGDL 75

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV +II   Y LEVSSPG++RP+ ++  F +  G V+  + ++  G ++   G +    
Sbjct: 76  LDVADIIHYPYHLEVSSPGLNRPLRKREQFAKVVGKVIEVKTLVPFGTRRNFKGILKEVG 135

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +        D +     I F ++  ARL
Sbjct: 136 VERIRM--------DCDNQLFEIPFSNMDRARL 160


>gi|257452236|ref|ZP_05617535.1| putative cytoplasmic protein [Fusobacterium sp. 3_1_5R]
 gi|317058779|ref|ZP_07923264.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
 gi|313684455|gb|EFS21290.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
          Length = 153

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 11/155 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I  ++ P  EE+    V +  +++     ++++VE+ +G++ L DC  LS  I  
Sbjct: 3   SVVQKIEKIVIPAAEELGLSLVDVEYMQDGGYWYVRVYVEKLEGDVNLEDCASLSGKIED 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +D   +I+  + LEVSSPGI+RP+ ++SDF+R+ G  +   +     +K+ + G +   
Sbjct: 63  AVDQ--LIDKKFFLEVSSPGIERPLKKESDFIRFTGEKIFVALKHKLNEKRNIEGILRAY 120

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 LE +          ++ I F  +  A L+
Sbjct: 121 ENQSLLLEVDGE--------ELQIPFSEVKKAHLV 147


>gi|224825863|ref|ZP_03698967.1| protein of unknown function DUF150 [Lutiella nitroferrum 2002]
 gi|224602087|gb|EEG08266.1| protein of unknown function DUF150 [Lutiella nitroferrum 2002]
          Length = 141

 Score =  151 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +  + +  V   L        ++F+++  G +T+ DC  +S  ++ +  VE
Sbjct: 2   DVRLLLENTLPGLGYELVDFELTPGGG--FRVFLDKP-GGITVEDCVLVSNHLTRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ ++SDF+R++G     +  +    ++K  G++ G  +   
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKESDFVRFSGQRAKIKTRMPIEQQKKFSGRLAGVVDGAV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            LE E R         +AI    +  ARL
Sbjct: 117 QLEFEGR--------TVAIPLAVIDKARL 137


>gi|167570130|ref|ZP_02363004.1| hypothetical protein BoklC_09816 [Burkholderia oklahomensis C6786]
          Length = 153

 Score =  151 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        ++ +++++  G +T+ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMVCVYIDQPAG-ITIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILYAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLI 143


>gi|34581536|ref|ZP_00143016.1| hypothetical protein [Rickettsia sibirica 246]
 gi|229586875|ref|YP_002845376.1| hypothetical protein RAF_ORF0746 [Rickettsia africae ESF-5]
 gi|259586186|sp|C3PNX3|RIMP_RICAE RecName: Full=Ribosome maturation factor rimP
 gi|28262921|gb|EAA26425.1| unknown [Rickettsia sibirica 246]
 gi|228021925|gb|ACP53633.1| Unknown [Rickettsia africae ESF-5]
          Length = 161

 Score =  151 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +   +++ DC + S+ IS I
Sbjct: 4   IEQQIANVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNSEKISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V   +      K +  GKI+   
Sbjct: 64  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKITLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|259016316|sp|Q9PGR5|RIMP_XYLFA RecName: Full=Ribosome maturation factor rimP
          Length = 199

 Score =  151 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 13/172 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    L      +L+++++     + +  +++ DCE +S+ +S
Sbjct: 7   EIVNLLAPKVETLGFELLGAEYLLVPSGAILRLYIDTPFAMQPECMVSIDDCERVSREVS 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LDVE  I G+Y LEVSSPG+DR +     F R     V   + L     ++L GKI+ 
Sbjct: 67  AYLDVEEPISGNYTLEVSSPGLDRRLFTLEQFARHYNQFVKVGLKLPQHGSRRLQGKIVR 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD-ELLRASLNNYGS 188
                   + +      +N +++A+ F+++  AR++     L  A L     
Sbjct: 127 VE------QVDGFVVLLVNGVELAVDFNNIDKARIVPDWSALGLAPLEKSKP 172


>gi|313115475|ref|ZP_07800940.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622185|gb|EFQ05675.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 161

 Score =  151 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 3/129 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  + ++++P +E M  R   +   +E  +  L++ +++ DG M    C ++S A+ PIL
Sbjct: 10  AQRVEALVRPTVEGMGLRLWDVVFEKEGPDWYLRVLIDK-DGTMDTDTCADVSHALDPIL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQKLIGKIMGTS 139
           D  + I+  Y LEV SPG+ R + R   +    G  +  +++   +   ++  G + G  
Sbjct: 69  DEADPIDQSYYLEVGSPGLGRKLTRPEHYEALKGQKIRVKLIRPNADGVREFSGILTGRE 128

Query: 140 ETGFFLEKE 148
            +   +  +
Sbjct: 129 GSTVTVNTD 137


>gi|115351433|ref|YP_773272.1| hypothetical protein Bamb_1380 [Burkholderia ambifaria AMMD]
 gi|170700024|ref|ZP_02891049.1| protein of unknown function DUF150 [Burkholderia ambifaria
           IOP40-10]
 gi|171317090|ref|ZP_02906293.1| protein of unknown function DUF150 [Burkholderia ambifaria MEX-5]
 gi|172060472|ref|YP_001808124.1| hypothetical protein BamMC406_1420 [Burkholderia ambifaria MC40-6]
 gi|122323374|sp|Q0BFY5|RIMP_BURCM RecName: Full=Ribosome maturation factor rimP
 gi|226734154|sp|B1YP34|RIMP_BURA4 RecName: Full=Ribosome maturation factor rimP
 gi|115281421|gb|ABI86938.1| protein of unknown function DUF150 [Burkholderia ambifaria AMMD]
 gi|170135083|gb|EDT03386.1| protein of unknown function DUF150 [Burkholderia ambifaria
           IOP40-10]
 gi|171097724|gb|EDT42551.1| protein of unknown function DUF150 [Burkholderia ambifaria MEX-5]
 gi|171992989|gb|ACB63908.1| protein of unknown function DUF150 [Burkholderia ambifaria MC40-6]
          Length = 152

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++  G ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMLCIYIDQLAG-ISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFEG---KKGEAAMLDFTLADIDKARLI 143


>gi|118443860|ref|YP_878212.1| hypothetical protein NT01CX_2139 [Clostridium novyi NT]
 gi|259585741|sp|A0Q0R0|RIMP_CLONN RecName: Full=Ribosome maturation factor rimP
 gi|118134316|gb|ABK61360.1| Hypothetical UPF0090 protein [Clostridium novyi NT]
          Length = 154

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 77/148 (52%), Gaps = 10/148 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +I+ +I+P++EE+++    I  + E+N   L+I+++   G + L DCE++S+ +S ILD
Sbjct: 9   DEINKLIKPIVEELNYELYYIEYVREQNENYLRIYIDSSKG-INLEDCEKVSRKVSDILD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            ++ I   Y LEVSSPGI+R +  +    ++  + +  ++       ++  G ++  ++ 
Sbjct: 68  EKDPISDSYYLEVSSPGIERVLYTEEHLHKYTNNQIIVKLAKLFEGSREHQGNLISFNDD 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLS 169
              +EKE           I I  + +  
Sbjct: 128 TVTIEKENES--------INIPRERIKK 147


>gi|325981568|ref|YP_004293970.1| hypothetical protein NAL212_0881 [Nitrosomonas sp. AL212]
 gi|325531087|gb|ADZ25808.1| protein of unknown function DUF150 [Nitrosomonas sp. AL212]
          Length = 155

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 14/163 (8%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
           + P       +A  +  +++  +  + +  V++      N LL+IFV++ +G + + DC 
Sbjct: 4   FSPFFICGGAMA--LEELLESTLHGLGYELVEVE-RSAHNKLLRIFVDKAEG-ICIDDCV 59

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S  +S +L VENI   + RLEVSSPG+DRP+ R++DF+R+ G  +  ++ +    ++ 
Sbjct: 60  TISNHLSRLLAVENI--DYGRLEVSSPGLDRPLRREADFIRFRGETIKLKLRIPLEGQKN 117

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +G +         LE E +         + +   ++  ARL+
Sbjct: 118 FVGILREVDNGIIKLEIEGK--------LLDLELSNVGKARLV 152


>gi|94971245|ref|YP_593293.1| hypothetical protein Acid345_4219 [Candidatus Koribacter versatilis
           Ellin345]
 gi|259585655|sp|Q1IIT1|RIMP_ACIBL RecName: Full=Ribosome maturation factor rimP
 gi|94553295|gb|ABF43219.1| protein of unknown function DUF150 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 169

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 79/164 (48%), Gaps = 13/164 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  +++ V  +     V++      K  +L+I +++ +G +T  DC  +S  +S IL
Sbjct: 4   IEKVREIVERVARDYGLEVVEVEFRGGGKARMLRITIDKPEG-VTHDDCSHVSNEVSTIL 62

Query: 81  DVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           DVE+++ G  Y LEVSSPG+DR + + +DF R+ G +V           +   G++   +
Sbjct: 63  DVEDVVPGASYTLEVSSPGLDRKISKPADFERFTGSLVKVSTREPLDGNRHFEGRLESFA 122

Query: 140 ETGFFLE----------KEKRGEKDMNELQIAISFDSLLSARLI 173
           +    ++          K+K  +  + E ++ I+   +  A L+
Sbjct: 123 DGKLTIDLNAVPQRGQKKQKGPKAPVVERKVEIALADVEKANLV 166


>gi|218439320|ref|YP_002377649.1| hypothetical protein PCC7424_2360 [Cyanothece sp. PCC 7424]
 gi|226701263|sp|B7KIU5|RIMP_CYAP7 RecName: Full=Ribosome maturation factor rimP
 gi|218172048|gb|ACK70781.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7424]
          Length = 155

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+ E++    V++     K   +L++ +     +  L DCE++S+++   
Sbjct: 5   LIPQIIDLATPIAEKLGLEIVEVVFQTNKRPPVLRLDIRNLSSDTGLDDCEQMSRSLEAT 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   +I G Y LE+SSPGI R +    +F+ + G  V  +      ++++  G + G  
Sbjct: 65  LDATELIPGSYVLEISSPGISRQLTSDREFIAFKGFEVIVKTYTPYENQKEWRGNLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L K+ R         IAI    +   +L
Sbjct: 125 EQAVYLNKKGRA--------IAIPRQLVAKVQL 149


>gi|225849797|ref|YP_002730031.1| hypothetical protein PERMA_0235 [Persephonella marina EX-H1]
 gi|259586177|sp|C0QTL6|RIMP_PERMH RecName: Full=Ribosome maturation factor rimP
 gi|225645648|gb|ACO03834.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 151

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 9/155 (5%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
              +   +  ++QP++EE   + V I  + E   +L+I++   +G  T+ DCE +S+ I 
Sbjct: 2   KQEIIEKVKEMLQPLLEERGLKLVDIEYVTEGKPVLRIYIYNPEGT-TIEDCEWISRRIG 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD+E++I   Y LEVSSPG++R +    ++  + G  +   +      K  + G + G
Sbjct: 61  ALLDIEDLIPVSYTLEVSSPGLERKLKNVEEYDIFKGRDIKIVLKEPVDKKNVIKGVLKG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +    +        +    ++ I  +++  A L
Sbjct: 121 REDNNIIV--------EEEGEEVRIPLENIARANL 147


>gi|260881110|ref|ZP_05403661.2| hypothetical protein MITSMUL_03619 [Mitsuokella multacida DSM
           20544]
 gi|260849563|gb|EEX69570.1| hypothetical protein MITSMUL_03619 [Mitsuokella multacida DSM
           20544]
          Length = 211

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 13/158 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSF-RSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   + +++Q ++++      V    ++E +  L+++++++ G + + DC+ LS+
Sbjct: 62  MAKQQVEDAVEAIVQELLKDQDVIELVDAEYVKEHDWYLRVYIDKE-GGIDIEDCQALSE 120

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +   LD  +++   Y LEVSSPGIDR + +  DF R  G  V   +      K+ ++G+
Sbjct: 121 KLEEALDKGDVVPDSYILEVSSPGIDRVLRKPRDFTREQGKKVDVTLYAPREGKKLVVGE 180

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G       L+ E +           I    +   RL
Sbjct: 181 LTGFDGDAIELDGETK-----------IPLADIAQVRL 207


>gi|320530107|ref|ZP_08031177.1| hypothetical protein HMPREF9555_01262 [Selenomonas artemidis F0399]
 gi|320137540|gb|EFW29452.1| hypothetical protein HMPREF9555_01262 [Selenomonas artemidis F0399]
          Length = 149

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 17/157 (10%)

Query: 21  LAGDISSVIQPVIEEM-----SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           ++  I   ++ ++ ++         V +  + E++  L+++++++ G + + DC  LS+ 
Sbjct: 1   MSAKIEERVEEIVRDLLPVQPELELVDVEYVRERDWYLRVYIDKE-GGIDIEDCRMLSEH 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  +LD E+ I   Y LEVSSPG+DR + +  DF R +G  V   +      K+ L G +
Sbjct: 60  LEEVLDREDFISDAYILEVSSPGLDRVLRKARDFEREHGKRVDVALYAPLDGKKNLTGAL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G       L+ +           + I  + +   RL
Sbjct: 120 TGYDGNVLILDDD-----------VRIPMEQVSQVRL 145


>gi|254302279|ref|ZP_04969637.1| hypothetical protein FNP_2331 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322471|gb|EDK87721.1| hypothetical protein FNP_2331 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 156

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ +I P IEEM    V +  +++     ++IF+E  +G++ + DC +LS  I
Sbjct: 4   NNQIVEKITKIINPFIEEMGLSLVDVEYVQDGGYWYVRIFIENLNGDLNIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I 
Sbjct: 64  EDK--VEELIEHKFFLEVSSPGLERPLKKLEDYIRFTGEKITLHLKHKLDDKKQFKAIIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +        +K+        +I I F+ +  A +
Sbjct: 122 EVNGDNIIFLIDKK--------EIEIKFNEIRKANI 149


>gi|310828068|ref|YP_003960425.1| hypothetical protein ELI_2480 [Eubacterium limosum KIST612]
 gi|308739802|gb|ADO37462.1| Uncharacterized protein conserved in bacteria [Eubacterium limosum
           KIST612]
          Length = 154

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  +I PV+E   +  V ++  +  K+ +L  +++  +G + L DCE +S+ +S ++D +
Sbjct: 10  LEELIAPVVEAEGYECVDVTFEKAGKDWVLTTYIDGPNG-IGLDDCEVVSRKLSDLMDEK 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + IE  Y LEVSSPGIDRP+ ++ DF R     +           ++L G + G      
Sbjct: 69  DPIEQSYLLEVSSPGIDRPLKKEKDFARNMDKRIVVSFYAPVNGSKQLSGILKGYKGVTL 128

Query: 144 FLEKEKRGEKDMNELQIA 161
            L+ +     ++    ++
Sbjct: 129 TLQLDSEEMMELEMSAVS 146


>gi|295102729|emb|CBL00274.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
           prausnitzii L2-6]
          Length = 161

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 3/129 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  + ++++PV+E M  R   +   +E  +  L++ ++R DG M    C E+S A+ PIL
Sbjct: 10  AQRVEALVRPVVEGMGLRLWDVVFEKEGPDWYLRVLIDR-DGTMDTDTCAEVSHALDPIL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQKLIGKIMGTS 139
           D  + I+  Y LEV SPG+ R + R   +    G  +  +++   +   ++  G + G  
Sbjct: 69  DEADPIDQSYYLEVGSPGLGRKLTRPEHYEALKGEKIGVKLIRPTADGVREFAGILKGRE 128

Query: 140 ETGFFLEKE 148
            +   +E E
Sbjct: 129 GSTVTVETE 137


>gi|331269631|ref|YP_004396123.1| hypothetical protein CbC4_1447 [Clostridium botulinum BKT015925]
 gi|329126181|gb|AEB76126.1| Hypothetical UPF0090 protein [Clostridium botulinum BKT015925]
          Length = 154

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 77/149 (51%), Gaps = 10/149 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              I+ +++P++E +++    I  + E+N   L+I+++   G + L DC+++S+ +S +L
Sbjct: 8   IDKINELVRPIVEGLNYELYYIEYVREQNENYLRIYIDSSKG-INLEDCQKVSRKVSDML 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y LEVSSPGI+R +       ++  + +  ++       ++  GK++  ++
Sbjct: 67  DEKDPIEDGYYLEVSSPGIERILHTDEHLHKYINNQIVIKLAKLFEGSREHQGKLLSFND 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLS 169
               +EK+           ++I  D +  
Sbjct: 127 ESITMEKDNE--------NVSIPRDRIKK 147


>gi|332968910|gb|EGK07957.1| protein of hypothetical function DUF150 [Kingella kingae ATCC
           23330]
          Length = 145

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 11/149 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +++   +  + +  V   L  +    L++F++++ G +T+ DC  +S  ++ +  VE
Sbjct: 2   DIQNILDTTLPGLGYELVDFELTAQG--TLRVFIDKE-GGITVEDCATVSNHLNRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++   +  LE+SSPG+DRP+ + SDF+R+ G     +  L    ++  IG+I    E   
Sbjct: 59  DV--DYKNLEISSPGLDRPLKKASDFVRFAGSQAKIKTRLPVDGQKNFIGRIESFDEATQ 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +     G+         I   ++  AR+
Sbjct: 117 MITLSFDGKVA------QIELSNVDKARI 139


>gi|194289951|ref|YP_002005858.1| hypothetical protein RALTA_A1852 [Cupriavidus taiwanensis LMG
           19424]
 gi|226696147|sp|B3R1E6|RIMP_CUPTR RecName: Full=Ribosome maturation factor rimP
 gi|193223786|emb|CAQ69793.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
          Length = 162

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 12/153 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S+ ++ +  VEN
Sbjct: 3   LADLIETTLSGMGYELVELERAPAG--LLRVYIDQPETGIAIEDCEKVSRQLTHVFTVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM----GTSE 140
           +   + RLEVSSPG+DRP+ + +DF+R+ G      + L    ++   G +        E
Sbjct: 61  V--DYERLEVSSPGLDRPLKKLADFVRFAGAEARVTLRLPVNGQKNFTGILREPTGAAGE 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               LE E +    + E  +      +  ARL+
Sbjct: 119 EKIGLEFEGKDGPALLEFAV----SDVDKARLV 147


>gi|302381339|ref|YP_003817162.1| hypothetical protein Bresu_0224 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191967|gb|ADK99538.1| protein of unknown function DUF150 [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 232

 Score =  150 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 8/169 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERD-DGNMTLRDCEELSQAISPILD 81
           +I  +I PV + +    V++ L+       LQ+  ER  D ++ + +C  LS+A+S +LD
Sbjct: 45  EILELIDPVADSIGLSIVRVRLMGGTLRRRLQVMAERPSDNDIDVGECARLSRAMSEVLD 104

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I G Y LEVSSPGIDRP+ R  DF  + G     E       +++  G + GT   
Sbjct: 105 AADPIAGEYLLEVSSPGIDRPLTRLKDFDLFEGLEARLESDRMIEGRKRFKGILAGTDGD 164

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
              ++ +   +  +      I FD L+ A+L++ D LL+       +  
Sbjct: 165 NIAIDLDGEDDTAL------IPFDWLVDAKLVMNDALLKRGAAIRAARG 207


>gi|302670326|ref|YP_003830286.1| hypothetical protein bpr_I0962 [Butyrivibrio proteoclasticus B316]
 gi|302394799|gb|ADL33704.1| hypothetical protein bpr_I0962 [Butyrivibrio proteoclasticus B316]
          Length = 154

 Score =  150 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 6/150 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +     +++ P+ E    R   +  ++E     L+ ++++ DG + + +C ++S A+S 
Sbjct: 6   DIEKKTEALLTPIAEANGVRVYDVEYVKEAGEWYLRAYIDK-DGGVDINECVDVSHALSD 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDV++ IE  Y LEVSSPG+ R + +   F    G  V  ++       ++  G +   
Sbjct: 65  ALDVDDFIEEAYTLEVSSPGLGRQLKKDRHFANSIGQDVELKLFKPRDGVKEFAGTLKSF 124

Query: 139 SETGFFLEKEKRGE----KDMNELQIAISF 164
            +T   +      E    K+++ +++A+ F
Sbjct: 125 DDTTVTVTINDIDETFIRKEISVIKLALDF 154


>gi|76809648|ref|YP_333312.1| hypothetical protein BURPS1710b_1913 [Burkholderia pseudomallei
           1710b]
 gi|167911168|ref|ZP_02498259.1| hypothetical protein Bpse112_11783 [Burkholderia pseudomallei 112]
 gi|254259962|ref|ZP_04951016.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
 gi|91208395|sp|Q3JSZ1|RIMP_BURP1 RecName: Full=Ribosome maturation factor rimP
 gi|76579101|gb|ABA48576.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
 gi|254218651|gb|EET08035.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
          Length = 153

 Score =  150 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 8/150 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        ++ +++++  G +T+ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLE--RTGRGMVCVYIDQPAG-ITIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E    K      +  +   +  ARLI
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADVDKARLI 143


>gi|289449993|ref|YP_003474584.1| hypothetical protein HMPREF0868_0246 [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184540|gb|ADC90965.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 155

 Score =  150 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQ 74
                +A    S+   +I +M +  V +  ++E  +  L+ ++++  G + L DC E+S+
Sbjct: 1   MAKSKIAAQAESLCAKLINDMGYDLVDVEFVKEGPDRFLRFYIDK-RGGVGLDDCTEVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +I P++D    I+  Y LEVSSPG+DRP+   SD LR  G  V   +  +    +K +G+
Sbjct: 60  SIDPLIDENLTIDQAYYLEVSSPGLDRPLKTDSDLLRHQGEKVEVTLYQARDGHKKFVGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIA-----ISFD 165
           I+   +    L  E  G       + A     I+FD
Sbjct: 120 IVAVDDGVLKLAVENMGVLSFTAAERAKVKQVITFD 155


>gi|253681731|ref|ZP_04862528.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
 gi|253561443|gb|EES90895.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
          Length = 154

 Score =  150 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 77/149 (51%), Gaps = 10/149 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              I+ +++P++E +++    I  + E+N   L+I+++   G + L DCE++S+ +S +L
Sbjct: 8   IDKINELVRPIVEGLNYELYYIEYVREQNENYLRIYIDSSKG-INLEDCEKVSRKVSDML 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y LEVSSPGI+R +       ++  + +  ++       ++  GK++  ++
Sbjct: 67  DEKDPIEDGYYLEVSSPGIERVLHTDEHLHKYINNQIVIKLAKLFEGSREHQGKLLNFND 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLS 169
               ++K+           I+I  D +  
Sbjct: 127 ESITIQKDNES--------ISIPRDRIKK 147


>gi|315497223|ref|YP_004086027.1| hypothetical protein Astex_0175 [Asticcacaulis excentricus CB 48]
 gi|315415235|gb|ADU11876.1| protein of unknown function DUF150 [Asticcacaulis excentricus CB
           48]
          Length = 222

 Score =  150 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE----EKNLLLQIFVERD-DGNMTLRDCEELSQAISP 78
            +     P+ E +    V++ L+          LQI  ER  DG++T+  C  LS+A+S 
Sbjct: 10  KLIEAFDPIAEALGLDIVRVRLMGSNKPGGPRRLQIMAERKTDGDITVNQCARLSRALSA 69

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+  + I G Y LEVSSPGIDRP+ R  DF  ++G     E+   +  +++  G + G 
Sbjct: 70  WLEESDPIVGEYILEVSSPGIDRPLTRLKDFDTYSGLEARLELDRLAEGRKRFRGILTG- 128

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL-----RASLNN 185
           +E G ++  +  GE+D       I FD ++ A+L++ DELL     +A+L  
Sbjct: 129 TEDGEYVAIDLEGEEDTAM----IPFDWIIDAKLVLNDELLKIGAEKAALRR 176


>gi|256830178|ref|YP_003158906.1| hypothetical protein Dbac_2411 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579354|gb|ACU90490.1| protein of unknown function DUF150 [Desulfomicrobium baculatum DSM
           4028]
          Length = 162

 Score =  150 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 72/161 (44%), Gaps = 12/161 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL---EEKNLLLQIFVERDDGNMTLRDCEEL 72
                +   +  ++ P+ E        I LL     ++ +++++++   G + + +C E+
Sbjct: 1   MDKNEIHARLMEMVTPLCEARDLEVWGIELLFAAGGRHKIVRVYLDSQQG-VGIDECSEV 59

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LDVE+II G + LEVSSPG++RP       L + G  V   +      ++   
Sbjct: 60  SRHLSLALDVEDIIPGAFNLEVSSPGLERPFFSTEQMLPYVGQTVRIRLDNPLEGRKNFK 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G+++      F L  +             +++D +  A L+
Sbjct: 120 GRLLSIESPMFTLSDD--------STTFELNWDDVGKANLV 152


>gi|153939522|ref|YP_001391720.1| hypothetical protein CLI_2478 [Clostridium botulinum F str.
           Langeland]
 gi|166987487|sp|A7GG10|RIMP_CLOBL RecName: Full=Ribosome maturation factor rimP
 gi|152935418|gb|ABS40916.1| conserved hypothetical protein [Clostridium botulinum F str.
           Langeland]
 gi|295319746|gb|ADG00124.1| conserved hypothetical protein [Clostridium botulinum F str.
           230613]
          Length = 153

 Score =  150 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+A+S 
Sbjct: 5   SLIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAVSE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +  +   K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSAIDKKKKYEGELVDF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    ++ E+          + I  + +    L
Sbjct: 124 NENEIDIKVEENI--------VTIPREKISKTTL 149


>gi|168187911|ref|ZP_02622546.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
 gi|169294239|gb|EDS76372.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 154

 Score =  150 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 78/148 (52%), Gaps = 10/148 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +I+ +I+P++EE+++    I  + E+N   L+I+++   G + L DCE++S+ +S ILD
Sbjct: 9   DEINKLIKPIVEELNYELYYIEYVVEQNENYLRIYIDSSKG-INLDDCEKVSRRVSEILD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            ++ I   Y LEVSSPGI+R +       ++  + +  ++       ++  GK++  ++ 
Sbjct: 68  EKDPISDSYYLEVSSPGIERVLYTDEHLHKYTNNQIIIKLGKLFEGSREHQGKLLSFNDD 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLS 169
              +E+E           I+I  D +  
Sbjct: 128 TVVIERENES--------ISIPRDRIKK 147


>gi|74316717|ref|YP_314457.1| hypothetical protein Tbd_0699 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056212|gb|AAZ96652.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 161

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+ + ++PV+  + +  V +        LL+IF+++  G +T+ DC  +S  ++ +  VE
Sbjct: 22  DLPARLEPVLAGLGYELVMLE--RAGRGLLRIFIDKP-GGVTIDDCVAVSNHLTHLFTVE 78

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+V+  D+ R+ G  V  ++ +   ++++L G+++G      
Sbjct: 79  NI--DYDRLEVSSPGLDRPLVKPQDYARFAGEQVTLKLRVPMDNRRRLSGQLLGLESDAV 136

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L  + R        ++++   ++ +ARL
Sbjct: 137 KLVVDGR--------EMSVDLRNVDAARL 157


>gi|78222793|ref|YP_384540.1| hypothetical protein Gmet_1583 [Geobacter metallireducens GS-15]
 gi|91208011|sp|Q39VA9|RIMP_GEOMG RecName: Full=Ribosome maturation factor rimP
 gi|78194048|gb|ABB31815.1| protein of unknown function DUF150 [Geobacter metallireducens
           GS-15]
          Length = 159

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 14/163 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++++ + ++       V I    E ++++L++FV++  G +TL DC  +S+
Sbjct: 1   MAKDEVVDRVTALAESLLSSQEMELVDIEYKREGRHMVLRLFVDKA-GGITLDDCALVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
             S ILDVE+ I  +Y LEVSSPG++RP+ R+SD+ R+ G +V         D     ++
Sbjct: 60  EFSEILDVEDFISENYTLEVSSPGLNRPLKRESDYERYRGRLVKVRTYDVVEDEAGNRRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +G + G +     L       K        I    +  A L
Sbjct: 120 TFLGDLEGLAGGVVTL-------KLREGQMARIPLAKIAKANL 155


>gi|237736657|ref|ZP_04567138.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420519|gb|EEO35566.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
          Length = 160

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I  ++ PV+ EM    V I  +++     ++I+VE  +G +TL +C  +S  I   
Sbjct: 10  IIEKIEKIVTPVVNEMGLSLVDIEYMQDGGYWYVRIYVENLNGEITLEECAAISGKIDE- 68

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DV+ +IE  + LEVSSPGI+RP+ +  DF+R+ G  +   +     DK+   G I    
Sbjct: 69  -DVDKLIEQRFFLEVSSPGIERPLKKIEDFIRFKGEKIKVSLKHKINDKKSFEGIITECK 127

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   FLE E+    ++        F  +  A +I
Sbjct: 128 DNIIFLEIEEENIVEI-------PFSEVKKANII 154


>gi|160943265|ref|ZP_02090501.1| hypothetical protein FAEPRAM212_00751 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445504|gb|EDP22507.1| hypothetical protein FAEPRAM212_00751 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105167|emb|CBL02711.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
           prausnitzii SL3/3]
          Length = 161

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 3/129 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  + ++++P +E M  R   +   +E  +  L+I ++R DG M    C E+S A+ PIL
Sbjct: 10  AQRVEALVRPTVEGMGLRLWDVVFEKEGPDWYLRILIDR-DGTMDTDTCAEVSHALDPIL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQKLIGKIMGTS 139
           D  + I+  Y LEV SPG+ R + R   +    G  V  +++   +   ++L G + G  
Sbjct: 69  DEADPIDQSYYLEVGSPGLGRKLTRPEHYEALKGQKVRAKLIRPNADGVRELSGILTGRE 128

Query: 140 ETGFFLEKE 148
            +   LE E
Sbjct: 129 GSTVTLETE 137


>gi|73541718|ref|YP_296238.1| hypothetical protein Reut_A2030 [Ralstonia eutropha JMP134]
 gi|91208397|sp|Q46ZN9|RIMP_RALEJ RecName: Full=Ribosome maturation factor rimP
 gi|72119131|gb|AAZ61394.1| Protein of unknown function DUF150 [Ralstonia eutropha JMP134]
          Length = 162

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 78/153 (50%), Gaps = 12/153 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S+ ++ +L VEN
Sbjct: 3   LADLIETTLNGMGYELVELERAPAG--LLRVYIDQPETGIVIEDCEKVSRQLTHVLTVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG-- 142
           +   + RLEVSSPG+DRP+ + +D++R+ G      + L    ++   G +   +     
Sbjct: 61  V--DYERLEVSSPGLDRPLKKLADYVRFAGAEARVTLRLPVNGQKNFTGILREPTGEAGA 118

Query: 143 --FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               LE E +    + E  +      +  ARL+
Sbjct: 119 EKVGLEFEGKDGPALLEFTV----SDVDKARLV 147


>gi|313896717|ref|ZP_07830265.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312974634|gb|EFR40101.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 149

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 17/157 (10%)

Query: 21  LAGDISSVIQPVIEEM-----SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
           ++  I   ++ +++++         V +  + E++  L+++++++ G + + DC  LS+ 
Sbjct: 1   MSAKIEERVEEIVQDLLPVQPELELVDVEYVRERDWYLRVYIDKE-GGIDIEDCRTLSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  ILD E+ I   Y LEVSSPG+DR + +  DF R +G  V   +      K+ L G++
Sbjct: 60  LEEILDREDFIADAYILEVSSPGLDRVLRKARDFEREHGKRVDVALYAPLDGKKNLTGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G       L+ +           + I  + +   RL
Sbjct: 120 TGYDGNVLILDDD-----------VRIPMEQVSQVRL 145


>gi|315648099|ref|ZP_07901200.1| hypothetical protein PVOR_22524 [Paenibacillus vortex V453]
 gi|315276745|gb|EFU40088.1| hypothetical protein PVOR_22524 [Paenibacillus vortex V453]
          Length = 153

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++QP + E  F  V +  ++E  N  L++FV++D   + + DC  +S+ +S  
Sbjct: 6   IKTTVEEMVQPYLNEHGFELVDVEYVKEGSNWFLRVFVDKDG-GIDIDDCGLISEYLSQK 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LEVSSPG +RP+ +K D  +  G  V   +       ++  GK+    
Sbjct: 65  LDENDPIPTAYFLEVSSPGAERPLKKKEDVAKSVGKNVFVTVYEPINGLKEFEGKLESFD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                ++  K+        Q  I +  + SARL +
Sbjct: 125 NEELVIQTVKK--------QYVIPYAKVASARLAI 151


>gi|256827234|ref|YP_003151193.1| hypothetical protein Ccur_08070 [Cryptobacterium curtum DSM 15641]
 gi|256583377|gb|ACU94511.1| uncharacterized conserved protein [Cryptobacterium curtum DSM
           15641]
          Length = 177

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 8/168 (4%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNM 64
           F  S  +       G    +   ++P   E     V I ++   K   +++F++  DG +
Sbjct: 9   FFCSGRKRGCQILTGKETRLLEALEPTAREKGIEIVSIEIVGSRKAPTIRVFIDTPDG-V 67

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           +          I+ I+D  +   G Y LEVSSPGIDRP+     F R++G      +   
Sbjct: 68  SFDALASAQSWINEIMDAIDPFPGAYMLEVSSPGIDRPLRTPEHFQRFSGQEAQIVLRAP 127

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              + K  G + G ++    L  +   E        +I++D++  A L
Sbjct: 128 IDGRSKFTGMLKGFADGAVLLLVDGADEVT------SINYDAIKRAHL 169


>gi|326572880|gb|EGE22865.1| hypothetical protein E9W_08250 [Moraxella catarrhalis CO72]
          Length = 165

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 18/166 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVE-----RDDGN-MTLRDCEELSQ 74
             +++ +I P +         I  + +    LL+I++E     R  G  +T+ DC  ++ 
Sbjct: 7   IAELTELITPAVAACGVDLWGIEFMPQGRKSLLRIYIESLPENRAAGEHVTIEDCSAVNH 66

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD----KQK 130
            +S +LDV + I G Y LEVSSPG DRP+  +     + G  +   ++ + G     ++K
Sbjct: 67  QVSGVLDVHDPIAGEYVLEVSSPGFDRPLFTREQVAAYVGETINLRLIHAIGSGDTKRRK 126

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           ++G++    E    +  E +       L+  I+FDS+  A L+  D
Sbjct: 127 VVGRLTCVGEDSMTVITEDK-------LEFNIAFDSVDKAHLVYED 165


>gi|297617184|ref|YP_003702343.1| hypothetical protein Slip_0999 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145021|gb|ADI01778.1| protein of unknown function DUF150 [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 153

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 10/155 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G+   +  +I+  +E +    V +    +    +LQ+F+++  G + L  C++ S+ I  
Sbjct: 5   GVVERVEPIIERELEPVGIDVVDVQYKNQAGRWVLQVFIDKP-GGVDLDTCQQASEIIGR 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E+ I   Y LEVSSPG+DR + +  DF R+ G  V  ++     +++   G ++G 
Sbjct: 64  ALDWEDPIPHSYVLEVSSPGLDRVLKKDKDFERFTGKKVTVKVREPINNQKNFKGLLLGL 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +    ++   R         + +     L  RL+
Sbjct: 124 RDGKIMVDLGDRI--------LEVPRTEALQVRLV 150


>gi|51246467|ref|YP_066351.1| hypothetical protein DP2615 [Desulfotalea psychrophila LSv54]
 gi|81641363|sp|Q6AJY2|RIMP_DESPS RecName: Full=Ribosome maturation factor rimP
 gi|50877504|emb|CAG37344.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 151

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              I   +  V++ M    V I    E    +L++F++  +G +TL  C ++S+ +   L
Sbjct: 6   VEKIEGYVASVLQSMDVELVDIQFRCEGHGWVLRLFID-VEGGVTLDLCAQVSREVGQYL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE++IE  Y LEVSSPG++RP+   ++F R+ G     ++      ++   G I    +
Sbjct: 65  DVEDVIEQAYHLEVSSPGVERPLKSLANFERFAGKKARIKLHEPLNGEKTFEGIIGPVED 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               L  + +              + L  ARL++
Sbjct: 125 GEVSLLVDGKIAVKCGI-------EQLNKARLVL 151


>gi|296113982|ref|YP_003627920.1| hypothetical protein MCR_1770 [Moraxella catarrhalis RH4]
 gi|295921676|gb|ADG62027.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
 gi|326559306|gb|EGE09733.1| hypothetical protein E9G_09360 [Moraxella catarrhalis 7169]
 gi|326564318|gb|EGE14548.1| hypothetical protein E9K_04722 [Moraxella catarrhalis 103P14B1]
 gi|326568243|gb|EGE18325.1| hypothetical protein E9U_09405 [Moraxella catarrhalis BC8]
 gi|326569944|gb|EGE19991.1| hypothetical protein E9Q_01306 [Moraxella catarrhalis BC1]
 gi|326570022|gb|EGE20068.1| hypothetical protein E9S_06263 [Moraxella catarrhalis BC7]
 gi|326573672|gb|EGE23630.1| hypothetical protein EA1_08342 [Moraxella catarrhalis O35E]
 gi|326574705|gb|EGE24641.1| hypothetical protein E9Y_05110 [Moraxella catarrhalis 101P30B1]
          Length = 165

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 18/166 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVE-----RDDGN-MTLRDCEELSQ 74
             +++ +I P +         I  + +    LL+I++E     R  G  +T+ DC  ++ 
Sbjct: 7   IAELTELIAPAVAACGVDLWGIEFMPQGRKSLLRIYIESLPENRAAGEHVTIEDCSAVNH 66

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD----KQK 130
            +S +LDV + I G Y LEVSSPG DRP+  +     + G  +   ++ + G     ++K
Sbjct: 67  QVSGVLDVHDPIAGEYVLEVSSPGFDRPLFTREQVAAYVGETINLRLIHAIGSGDTKRRK 126

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           ++G++    E    +  E +       L+  I+FDS+  A L+  D
Sbjct: 127 VVGRLTCVGEDSMTVITEDK-------LEFNIAFDSVDKAHLVYED 165


>gi|15895074|ref|NP_348423.1| hypothetical protein CA_C1798 [Clostridium acetobutylicum ATCC 824]
 gi|34223132|sp|Q97I55|RIMP_CLOAB RecName: Full=Ribosome maturation factor rimP
 gi|15024771|gb|AAK79763.1|AE007689_1 Uncharacterized protein, YhbC family [Clostridium acetobutylicum
           ATCC 824]
 gi|325509212|gb|ADZ20848.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 149

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 73/133 (54%), Gaps = 2/133 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +I+PV+E + +    I +++E     L++++++++G ++L DCE++S+AIS +
Sbjct: 1   MIDKLIEIIRPVVESLGYEFYHIEIVKEDGERYLRVYIDKENG-ISLDDCEKVSRAISDL 59

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I   Y LEVSSPGI R +  +    ++ G+ V  ++  S        GK++  +
Sbjct: 60  LDEKDPIPYSYYLEVSSPGIYRTLFTEEHLKKYIGNTVDIKLKSSLEKSTNYSGKLIDVN 119

Query: 140 ETGFFLEKEKRGE 152
           E    +      E
Sbjct: 120 EEDIVIVVSDNRE 132


>gi|315924375|ref|ZP_07920597.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622254|gb|EFV02213.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 162

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
             M     I  +++P +  + +    +   +  K  +L ++++R +G ++L DCE++S+ 
Sbjct: 10  RKMARKDAIYELLKPQVTTLGYELYDVDFEKAGKKRILTVYIDRKEG-ISLEDCEKVSRE 68

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           IS  LD  + I   Y L+VSSPG++R + R   +    G ++  ++  +   +++L   +
Sbjct: 69  ISAFLDAADPIAETYTLQVSSPGLERKLTRLKHYRAVVGEMIDLKLFEAIDGQKQLCAVL 128

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +    ++       + +   + I F S+  A L
Sbjct: 129 RFVDDEKIVVQ-------EGDAEPLTIPFKSIAKASL 158


>gi|259586206|sp|Q01W33|RIMP_SOLUE RecName: Full=Ribosome maturation factor rimP
          Length = 153

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 9/154 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  V Q V +      V++ +    +  L++I +++ +G +T  DC+ +S  +  
Sbjct: 4   AVTSKVEEVAQRVAQSEGLELVEVEVKGGGSARLVRISIDKPEG-VTHADCQTVSDKVGE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           IL+ E+ I GHY LEVSSPG++R +++  D+ R++G      +      ++   G + G 
Sbjct: 63  ILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQRFHGQKAKITVREEVDGRRTWEGTLAGF 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++    LE               + FD +  A L
Sbjct: 123 ADGVISLEV-------APGEIRRLPFDQVKKANL 149


>gi|319947586|ref|ZP_08021816.1| hypothetical protein containing DUF150 [Streptococcus australis
           ATCC 700641]
 gi|319746274|gb|EFV98537.1| hypothetical protein containing DUF150 [Streptococcus australis
           ATCC 700641]
          Length = 195

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++QP I+   F  V +   +   + +L IFV++  G +TL D  +L++ ISP+
Sbjct: 43  IVELVTEILQPAIQA-PFELVDVEYGKMGGDYVLSIFVDKP-GGITLNDTADLTEVISPL 100

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K    +  G  +   +  +   ++ + G ++ 
Sbjct: 101 LDQIQPDPFPEQYFLEVTSPGLERPLKTKDAVEKSLGQYIHVSLYKAVDKQKVIEGTLVK 160

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    +E   +  K      I I +  +  ARL V
Sbjct: 161 FEDDQLTMEYMDKTRKK----TIEIPYSLVSKARLAV 193


>gi|303256974|ref|ZP_07342988.1| DUF150-containing protein [Burkholderiales bacterium 1_1_47]
 gi|330999162|ref|ZP_08322881.1| hypothetical protein HMPREF9439_00503 [Parasutterella
           excrementihominis YIT 11859]
 gi|302860465|gb|EFL83542.1| DUF150-containing protein [Burkholderiales bacterium 1_1_47]
 gi|329575362|gb|EGG56906.1| hypothetical protein HMPREF9439_00503 [Parasutterella
           excrementihominis YIT 11859]
          Length = 186

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 32/182 (17%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M ++  +  +I   +E + +  V +  L     L+++ +++ DG +TL DCE++S  ++ 
Sbjct: 1   MAVSTQLFEMIDATVEGLGYELVDVEKLPRG--LIRVTIDK-DGGITLDDCEKVSNQLNN 57

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-------GDKQKL 131
            + VEN+   + RLEVSSPG+DRP+ R  DF+++ G  V  E+             +++L
Sbjct: 58  AMTVENV--DYDRLEVSSPGVDRPLKRPRDFVKFVGQNVHVELFAPITGEGLPENGRRRL 115

Query: 132 IGKIMGTSETG----FFLEKEK----------------RGEKDMNELQIAISFDSLLSAR 171
            G +             +   +                + + D   + +   F+ +  A 
Sbjct: 116 DGTLDAVEGDENNPSITMTLSENRVARTPAEKQRAAKTKAKSDTPAVTVTFPFNDVERAN 175

Query: 172 LI 173
           L+
Sbjct: 176 LV 177


>gi|226940849|ref|YP_002795923.1| hypothetical protein LHK_01930 [Laribacter hongkongensis HLHK9]
 gi|254800662|sp|C1D8X4|RIMP_LARHH RecName: Full=Ribosome maturation factor rimP
 gi|226715776|gb|ACO74914.1| Uncharacterized protein conserved in bacteria [Laribacter
           hongkongensis HLHK9]
          Length = 141

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+ ++++  +  + +  V   L      L+++F++   G + L DC ++S  ++ +  VE
Sbjct: 2   DVRTLLETTLSGLGYELVDFEL--GHGGLMRVFIDAPAG-IALDDCVKVSNHLTRLFTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ R++D+ R+ G  V  +  L  G+++K  G ++G ++   
Sbjct: 59  NI--DYDRLEVSSPGLDRPLTREADYARFAGERVRIKTRLPIGERKKFAGTLVGLADGQV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L        D++  ++AI   S+  ARL
Sbjct: 117 EL--------DIDGERVAIPLASIDKARL 137


>gi|82702987|ref|YP_412553.1| hypothetical protein Nmul_A1866 [Nitrosospira multiformis ATCC
           25196]
 gi|91208392|sp|Q2Y7W0|RIMP_NITMU RecName: Full=Ribosome maturation factor rimP
 gi|82411052|gb|ABB75161.1| Protein of unknown function DUF150 [Nitrosospira multiformis ATCC
           25196]
          Length = 142

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 12/150 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++P +  + +  V +        LL+IF+++  G + + DC  +S  +S  L VE
Sbjct: 2   DLYELLEPTLAGLGYELVDLE-RSPGGKLLRIFIDKP-GGVNVDDCVTVSNHLSRFLAVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ + +DF+R+ G  V   + ++   ++  +G +    +   
Sbjct: 60  NV--DYDRLEVSSPGLDRPLKKTADFIRFAGESVKLRLRVALQGQRNFVGILREVKDGIL 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE + +         + +   +L   RL+
Sbjct: 118 KLEVDGK--------MLDLELTNLEKVRLV 139


>gi|326565083|gb|EGE15276.1| hypothetical protein E9M_00058 [Moraxella catarrhalis 46P47B1]
 gi|326567251|gb|EGE17371.1| hypothetical protein E9O_01044 [Moraxella catarrhalis 12P80B1]
          Length = 165

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVE-----RDDGN-MTLRDCEELSQ 74
             +++ +I P ++        I  + +    LL+I++E     R  G  +T+ DC  ++ 
Sbjct: 7   IAELTELIAPAVDACGVDLWGIEFMPQGRKSLLRIYIESLPENRAAGEHVTIEDCSAVNH 66

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD----KQK 130
            +S +LDV + I G Y LEVSSPG DRP+  +     + G  +   ++ + G     ++K
Sbjct: 67  QVSGVLDVHDPIAGEYVLEVSSPGFDRPLFTREQVAAYVGETINLRLIHAIGSGDTKRRK 126

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           ++G++    E    +  E +       L+  I+FDS+  A L+  D
Sbjct: 127 VVGRLTCVGEDSMTVITEDK-------LEFNIAFDSVDKAHLVYED 165


>gi|307243344|ref|ZP_07525508.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306493291|gb|EFM65280.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 155

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 4/145 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +A  +   IQP +E   +  V +  ++E     L++ ++ ++G + L +CE++S+ I+P
Sbjct: 4   NIAQRVEEKIQPSVEGFGYELVDVEYVKEAGVYYLRVIIDHENG-IGLDECEKVSREINP 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGKIM 136
           ILD E+ IE +Y LEV SPGIDR + R  +F ++ G  V  ++  +  D   ++   ++ 
Sbjct: 63  ILDEEDYIEDNYFLEVCSPGIDRVLKRDKEFSKYAGKTVEVKLYKNDQDLKTKQFEAELR 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIA 161
           G  + G  +      EK  +  +IA
Sbjct: 123 GLDQDGMVVVSIGDTEKKFDRKEIA 147


>gi|169334800|ref|ZP_02861993.1| hypothetical protein ANASTE_01206 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257538|gb|EDS71504.1| hypothetical protein ANASTE_01206 [Anaerofustis stercorihominis DSM
           17244]
          Length = 172

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 76/153 (49%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++ + ++++     + I   +E N  +L++++ER +G ++L +   +++ +S +
Sbjct: 22  VIDRVEALSEDILKDNGCELIDIEFKKEGNNKVLRLYIERIEGKVSLDEISTVNRLLSDL 81

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ IE  Y LEVSSPG++R + ++ DF+++ G  V  ++      K++  G + G  
Sbjct: 82  LDEEDFIEEEYILEVSSPGVNRVIKKEKDFIKFKGSKVDVKLYKPLNGKKQFTGILEGYE 141

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                ++ +           + I    +    L
Sbjct: 142 NENVLIDLDGE--------HLVIPHKDISKVNL 166


>gi|28210958|ref|NP_781902.1| hypothetical protein CTC01272 [Clostridium tetani E88]
 gi|34222839|sp|Q895K1|RIMP_CLOTE RecName: Full=Ribosome maturation factor rimP
 gi|28203397|gb|AAO35839.1| protein associated with NUS operon [Clostridium tetani E88]
          Length = 153

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 10/153 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
             ++  + +P++ ++ +    +  + E K   L+I+++ + G + L DCE++S+A+S +L
Sbjct: 7   IDNLKELTEPIVNDLDYELYYLEFVNENKENYLRIYIDSESG-IGLEDCEKVSRAVSAML 65

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I+  Y LEVSSPG++R +          G      +       +K  GK+     
Sbjct: 66  DEKDPIDTSYYLEVSSPGLERQLYDDKHIEDNIGKTACVRLESLFNGGRKFEGKLKSFDN 125

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               LE        +N     I    +    LI
Sbjct: 126 ENLTLE--------INAEDFKIPRKKIKRINLI 150


>gi|254412382|ref|ZP_05026156.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196180692|gb|EDX75682.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 153

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 9/150 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +  PV E++    V       +   +L++ +   DG+  L DCE +S+A+   
Sbjct: 5   LIPQLIDLATPVAEKLGLEFVGAVFHTNRRPPVLRVDIRNRDGDTGLDDCERMSRALEAE 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  ++I   Y LE+SSPGI + +    DF+ + G  V           ++  GK++   
Sbjct: 65  LDAVDLIPDAYVLEISSPGISQELTTDRDFIAFKGFSVVVNTAEPDQGHKEWRGKLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
           +T  ++ ++ R         IAI  D +  
Sbjct: 125 DTRVYINQKGRA--------IAIPRDQVTK 146


>gi|187923622|ref|YP_001895264.1| hypothetical protein Bphyt_1630 [Burkholderia phytofirmans PsJN]
 gi|226736380|sp|B2T379|RIMP_BURPP RecName: Full=Ribosome maturation factor rimP
 gi|187714816|gb|ACD16040.1| protein of unknown function DUF150 [Burkholderia phytofirmans PsJN]
          Length = 152

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++  G + + DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVVGLGYELVDLE--RTGRGMLCIYIDQPAG-IAIEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V   +      ++   G +        
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVVITLKKPLDGRKSYRGILHAPQGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E +    M +  +A     +  ARL+
Sbjct: 117 GLEFEGKEGAAMLDFTLA----DIDKARLV 142


>gi|148380377|ref|YP_001254918.1| hypothetical protein CBO2421 [Clostridium botulinum A str. ATCC
           3502]
 gi|153933725|ref|YP_001384597.1| hypothetical protein CLB_2286 [Clostridium botulinum A str. ATCC
           19397]
 gi|153935745|ref|YP_001388113.1| hypothetical protein CLC_2269 [Clostridium botulinum A str. Hall]
 gi|166987426|sp|A7FVZ7|RIMP_CLOB1 RecName: Full=Ribosome maturation factor rimP
 gi|166987470|sp|A5I4J7|RIMP_CLOBH RecName: Full=Ribosome maturation factor rimP
 gi|148289861|emb|CAL83969.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929769|gb|ABS35269.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152931659|gb|ABS37158.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
          Length = 153

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+AIS 
Sbjct: 5   SLIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAISE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++  + +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKSYNIVLNLYSPIDKKKKYEGELVDF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    ++ E+          + I  + +    L
Sbjct: 124 NENEIDIKVEENI--------VTIPREKISKTTL 149


>gi|257465969|ref|ZP_05630280.1| putative cytoplasmic protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917125|ref|ZP_07913365.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691000|gb|EFS27835.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 153

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 11/155 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I  ++ P  EE+    V +  +++     ++++VE+ +G++ L DC  LS  I  
Sbjct: 3   SVVQKIEKIVIPAAEELGLSLVDVEYMQDGGYWYVRVYVEKLEGDVNLEDCASLSGKIED 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +D   +I+  + LEVSSPGI+RP+ ++SDF+R+ G  +   +     +K+ + G +   
Sbjct: 63  AVDQ--LIDKKFFLEVSSPGIERPLKKESDFIRFTGEKIFVALKHKLNEKRNIEGILRAY 120

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 LE +          ++ I F  +  + L+
Sbjct: 121 ENQTLLLEVDGE--------ELQIPFSEVKKSHLV 147


>gi|226949775|ref|YP_002804866.1| hypothetical protein CLM_2715 [Clostridium botulinum A2 str. Kyoto]
 gi|254801446|sp|C1FS63|RIMP_CLOBJ RecName: Full=Ribosome maturation factor rimP
 gi|226844311|gb|ACO86977.1| conserved hypothetical protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 153

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+ E + +    I  ++E K   L+I+++ ++G ++L  CE++S+AIS 
Sbjct: 5   SLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENG-VSLEGCEKVSRAISE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++  + +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKSYNIVLNLYSPIDKKKKYEGELVDF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    ++ E+          + I  + +    L
Sbjct: 124 NENEIDIKVEENI--------VTIPREKISKTTL 149


>gi|256846937|ref|ZP_05552391.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|294784278|ref|ZP_06749573.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
 gi|256717735|gb|EEU31294.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|294488144|gb|EFG35495.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
          Length = 156

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I
Sbjct: 4   NNQIVEKITKIVNPFIEEMNLSLVDVEYVQDGGYWYIRIFIENLNGDLNIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I 
Sbjct: 64  EDK--VEGLIEHKFFLEVSSPGLERPLKKIEDYVRFTGEKITLHLKHKLDDKKQFKAIIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +        +K+        +I I F+ +  A +
Sbjct: 122 EVNGDNIIFLIDKK--------EIEIKFNEIRKANI 149


>gi|327398876|ref|YP_004339745.1| Ribosome maturation factor rimP [Hippea maritima DSM 10411]
 gi|327181505|gb|AEA33686.1| Ribosome maturation factor rimP [Hippea maritima DSM 10411]
          Length = 140

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 16/152 (10%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L+ ++   I  V+E + +    I L ++K   + I++++  G +++ DCE  S+ IS +L
Sbjct: 2   LSEELKEDIFVVVESLGYSVYDIELTQKK---ITIYIDKP-GGVSIDDCELASRNISALL 57

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DV++   G Y LEVSSPGI+R +  K  F+   G            + +   G +   ++
Sbjct: 58  DVKDPFSGSYTLEVSSPGINRKLKTKEHFMAAIGKKCVVHTHFPVDNSKVFKGILTECND 117

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E             + I FD++  AR+
Sbjct: 118 NEIVIEG------------VRIEFDNIKKARI 137


>gi|256028608|ref|ZP_05442442.1| putative cytoplasmic protein [Fusobacterium sp. D11]
 gi|289766526|ref|ZP_06525904.1| conserved hypothetical protein [Fusobacterium sp. D11]
 gi|289718081|gb|EFD82093.1| conserved hypothetical protein [Fusobacterium sp. D11]
          Length = 156

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 80/157 (50%), Gaps = 11/157 (7%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
           G+  +   I+ ++ P +EEM+   V +  +++     ++IF+E  +G++++ DC +LS  
Sbjct: 3   GNNQIVEKITEIVNPFVEEMNLSLVDVEYVQDGAYWYIRIFIENLNGDLSIEDCSKLSSK 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I   +  E +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I
Sbjct: 63  IEDKI--EKLIEHKFFLEVSSPGLERPLKKIEDYIRFTGEKITLHLKHKLDDKKQFKAII 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +        +K+        +I I F+ +  A +
Sbjct: 121 KEVNGNNIIFLIDKK--------EIEIKFNEIRKANI 149


>gi|187778985|ref|ZP_02995458.1| hypothetical protein CLOSPO_02580 [Clostridium sporogenes ATCC
           15579]
 gi|187772610|gb|EDU36412.1| hypothetical protein CLOSPO_02580 [Clostridium sporogenes ATCC
           15579]
          Length = 153

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++   I+P+++ +S+    I  ++E K   L+I+++ + G ++L  CE++S+A+S 
Sbjct: 5   SLIENLKKQIEPIVKGLSYDLYHIEFVKEGKENYLRIYIDSESG-VSLEGCEKVSRAVSE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+++  
Sbjct: 64  LLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSPIDKKKKYEGELVDF 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    ++ E+          + I  + +    L
Sbjct: 124 NENEINIKVEENI--------VIIPREKISKTTL 149


>gi|323697470|ref|ZP_08109382.1| protein of unknown function DUF150 [Desulfovibrio sp. ND132]
 gi|323457402|gb|EGB13267.1| protein of unknown function DUF150 [Desulfovibrio desulfuricans
           ND132]
          Length = 152

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 71/150 (47%), Gaps = 10/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S +I+P +E + +    + S    K  +++I+++   G + +  C E+S+ +  +L+VE
Sbjct: 9   LSDMIRPEVENLGYVFWGLASPSSGKKRVVRIYIDAP-GGVNIDQCAEVSRQVGLMLEVE 67

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++I G + LEVSSPG++RP    +    + G  V   +      ++K  G++ G      
Sbjct: 68  DVIPGAFVLEVSSPGLERPFFAPAQLADYVGRKVDVLLFEPLDGRRKFKGELTGVEGDTV 127

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +  + +         +   + ++    L+
Sbjct: 128 TVNVDDQ--------TMNFDWTAIKKITLV 149


>gi|315222141|ref|ZP_07864050.1| UPF0090 protein [Streptococcus anginosus F0211]
 gi|315188767|gb|EFU22473.1| UPF0090 protein [Streptococcus anginosus F0211]
          Length = 162

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+E  +  V I   +   + +L IFV++  G +T+ D  +L+  ISP+
Sbjct: 10  IVELVKEVVEPVIQE-PYELVNIEYGKMGSDHVLSIFVDKP-GGITVNDTADLTDIISPL 67

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +    +   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEVTSPGLERPLKTKEQLAAAVGEYIHVSLYQALDKSKVFEGTLLS 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K +    + I +  +  ARL V
Sbjct: 128 FEEDHLTMEYMDKTRKKV----VQIPYQLVSKARLAV 160


>gi|19705319|ref|NP_602814.1| putative cytoplasmic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|34223125|sp|Q8RHJ4|RIMP_FUSNN RecName: Full=Ribosome maturation factor rimP
 gi|19713290|gb|AAL94113.1| Hypothetical cytosolic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 156

 Score =  147 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I
Sbjct: 4   NNQIVEKITRIVNPFIEEMNLSLVDVEYVQDGGYWYVRIFIENLNGDLNIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++RP+ +  D+ R+ G  +   +     DK++    I 
Sbjct: 64  EDK--VEELIEHKFFLEVSSPGLERPLKKLEDYTRFIGEKITLHLKHKLDDKKQFKTIIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +        +K+        ++ I F+ +  A +
Sbjct: 122 EVNGDNIIFLMDKK--------EVEIKFNEIRKANI 149


>gi|146319504|ref|YP_001199216.1| hypothetical protein SSU05_1850 [Streptococcus suis 05ZYH33]
 gi|259645119|sp|A4VXH7|RIMP_STRSY RecName: Full=Ribosome maturation factor rimP
 gi|145690310|gb|ABP90816.1| unknown protein [Streptococcus suis 05ZYH33]
          Length = 158

 Score =  147 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +++ I P I+   +  V +   +   + +L IFV+++ G ++L+D  +LS+ ISP
Sbjct: 5   SIIELVTAAITPAIQ-TPYELVDVEYGKMGGDYVLSIFVDKE-GGISLQDTADLSEKISP 62

Query: 79  ILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           ILD    +     Y LEV+SPG++RP+       +  G  +  ++  +    +   G ++
Sbjct: 63  ILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIHVKLYQAIDKLKVFEGTLL 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               T   +E   +  K     ++ I + ++  ARL V
Sbjct: 123 SFDGTDLIMEYMDKTRKK----EVTIPYQTVAKARLAV 156


>gi|237743253|ref|ZP_04573734.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
 gi|229433032|gb|EEO43244.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
          Length = 156

 Score =  147 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 11/157 (7%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
           G+  +   I+ ++ P +EEM+   V +  +++     ++IF+E  +G++++ DC +LS  
Sbjct: 3   GNNQIVEKITEIVNPFVEEMNLSLVDVEYVQDGAYWYIRIFIENLNGDLSIEDCSKLSSK 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I   +  E +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I
Sbjct: 63  IEDKI--EKLIEHKFFLEVSSPGLERPLKKIEDYIRFTGEKITLHLKHKLDDKKQFKAII 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +        + +        +I I F+ +  A +
Sbjct: 121 KEVNGNNIIFLIDNK--------EIEIKFNEIRKANI 149


>gi|291541941|emb|CBL15051.1| Uncharacterized protein conserved in bacteria [Ruminococcus bromii
           L2-63]
          Length = 159

 Score =  147 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 67/128 (52%), Gaps = 3/128 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  + QP++E        +  ++E  +  L++++++ +G + + DCE +S+AI+  L
Sbjct: 10  VSKVWELCQPIVEGFGLSLWDVRYVKEGADRFLRVYIDKPEG-IDINDCENVSRAINGPL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-KQKLIGKIMGTS 139
           D  + IE  Y LEV SPGI+R ++R   F+++ G  +  +++       ++  G +   S
Sbjct: 69  DELDPIEEAYCLEVCSPGIERELIRDEHFMQFIGADIMVKMLRPIDGIGREFKGVLKDYS 128

Query: 140 ETGFFLEK 147
           +    +E 
Sbjct: 129 DGKVTIED 136


>gi|146321699|ref|YP_001201410.1| hypothetical protein SSU98_1852 [Streptococcus suis 98HAH33]
 gi|259586202|sp|A4W3S1|RIMP_STRS2 RecName: Full=Ribosome maturation factor rimP
 gi|145692505|gb|ABP93010.1| unknown protein [Streptococcus suis 98HAH33]
 gi|292559122|gb|ADE32123.1| hypothetical protein SSGZ1_1667 [Streptococcus suis GZ1]
          Length = 158

 Score =  147 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +++ I P I+   +  V +   +   + +L IFV+++ G ++L+D  +LS+ ISP
Sbjct: 5   SIIELVTAAITPAIQ-TPYELVDVEYGKMGGDYVLSIFVDKE-GGISLQDTADLSEKISP 62

Query: 79  ILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           ILD    +     Y LEV+SPG++RP+       +  G  +  ++  +    +   G ++
Sbjct: 63  ILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIHVKLYQAIDKIKVFEGTLL 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               T   +E   +  K     ++ I + ++  ARL V
Sbjct: 123 SFDGTDLIMEYMDKTRKK----EVTIPYQTVAKARLAV 156


>gi|71276364|ref|ZP_00652641.1| Protein of unknown function DUF150 [Xylella fastidiosa Dixon]
 gi|71898653|ref|ZP_00680823.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
 gi|170729431|ref|YP_001774864.1| hypothetical protein Xfasm12_0201 [Xylella fastidiosa M12]
 gi|71162826|gb|EAO12551.1| Protein of unknown function DUF150 [Xylella fastidiosa Dixon]
 gi|71731600|gb|EAO33661.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
 gi|167964224|gb|ACA11234.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 215

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 85/156 (54%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    +      +L+++++     + +  +++ DCE +S+ +S
Sbjct: 23  EIVNLLAPKVEMLGFDLLGAEYVLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 82

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 83  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 143 VEQVGGFV------VLLVNGVELAVDFNNIDKARIV 172


>gi|85710532|ref|ZP_01041596.1| hypothetical protein NAP1_08982 [Erythrobacter sp. NAP1]
 gi|85687710|gb|EAQ27715.1| hypothetical protein NAP1_08982 [Erythrobacter sp. NAP1]
          Length = 188

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 17/174 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL----EEKNLLLQIFVERD-DGNMTLRDCEELS 73
           M     ++ +I+P  E + F  V++ ++     +    LQI  E    G + +  C ELS
Sbjct: 1   MTDIARLTDLIEPEAEALGFELVRVKMMPSEAGDGGEALQIMAEDPATGQLVIEQCAELS 60

Query: 74  QAISPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           + +S ++D      E +IEG Y LEVSSPGIDRP+ R+ DF  W GH     +      +
Sbjct: 61  RRVSDMIDAREEAGEVLIEGAYHLEVSSPGIDRPLTREKDFANWAGHEARIVMTKGFDGQ 120

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +   G++ G       +   K GE         +  D + SA+L +TD+L+ A+
Sbjct: 121 RVYKGELGGVENGMVTITDAKAGEAK-------LPQDQIHSAKLELTDKLIAAT 167


>gi|257094535|ref|YP_003168176.1| hypothetical protein CAP2UW1_2969 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047059|gb|ACV36247.1| protein of unknown function DUF150 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 155

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 82/163 (50%), Gaps = 13/163 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD--GNMTLRDCEELSQAISPILD 81
           D+  V++  +  + ++ V +     +  +L++F+++      + + DC  +S  ++ +L 
Sbjct: 2   DLHEVLEVTVTGLGYQLVDVE-RSPRGRVLRVFIDKPAKPRGVDVEDCALVSNQLTRVLL 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VENI   + RLEVSSPG+DRP+ ++ DF R+ G  V  ++ L    ++   G + G  + 
Sbjct: 61  VENI--DYERLEVSSPGLDRPLTKEVDFERFAGSEVTIKLRLPLNGRRNFAGVLHGAQDG 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
              ++        ++  +I     ++  ARL+   +L ++S  
Sbjct: 119 KVRVQ--------IDSGEIEFDLANIDKARLVPDFDLKKSSNR 153


>gi|186476489|ref|YP_001857959.1| hypothetical protein Bphy_1731 [Burkholderia phymatum STM815]
 gi|226736435|sp|B2JKT6|RIMP_BURP8 RecName: Full=Ribosome maturation factor rimP
 gi|184192948|gb|ACC70913.1| protein of unknown function DUF150 [Burkholderia phymatum STM815]
          Length = 152

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 9/150 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++  G + + DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVVGLGYELVDLE--RTGRGMLCIYIDQPAG-IAIEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +        
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEAVITLKKPLDGRKSYRGILHAPEGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E +    M +  +A     +  ARL+
Sbjct: 117 GLEFEGKEGAAMLDFTLA----DIDKARLV 142


>gi|83748668|ref|ZP_00945685.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551]
 gi|207743365|ref|YP_002259757.1| hypothetical protein RSIPO_01539 [Ralstonia solanacearum IPO1609]
 gi|83724630|gb|EAP71791.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551]
 gi|206594762|emb|CAQ61689.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 162

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 12/153 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN
Sbjct: 3   LTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE---- 140
           +   + RLEVSSPG+DRP+   +DF R+ G  V   + L    ++   G +   +     
Sbjct: 61  V--HYERLEVSSPGLDRPLRTLTDFTRFAGQEVKVTLRLPVDGQKNFTGIVQAPTGEPGQ 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               LE E +         +  +   L  ARL+
Sbjct: 119 ERIGLEFEGKD----GPALLEFTLSELDRARLV 147


>gi|302878487|ref|YP_003847051.1| hypothetical protein Galf_1259 [Gallionella capsiferriformans ES-2]
 gi|302581276|gb|ADL55287.1| protein of unknown function DUF150 [Gallionella capsiferriformans
           ES-2]
          Length = 141

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 13/152 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +I+  +  + +  V +        LL++F+++ DG + + DC+ +S  ++ +  VE
Sbjct: 2   DVVKLIEVTVSGLGYELVDVE--RAGRGLLRVFIDKPDG-IAVEDCQVVSNQLTRLFTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DR + +++DF+R+ G     ++ +    ++  IG I   ++   
Sbjct: 59  NI--DYDRLEVSSPGLDRALKKEADFIRFVGQKAQIKLRMPIAARKNFIGVIGEINDGVL 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            L+ E         + +AI   ++  ARL+ T
Sbjct: 117 QLDVEG--------VPVAIELTNVDKARLVPT 140


>gi|170077375|ref|YP_001734013.1| hypothetical protein SYNPCC7002_A0752 [Synechococcus sp. PCC 7002]
 gi|169885044|gb|ACA98757.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 166

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I +  +P+  E+    V +     K   +L+I V     +  L DCE  S+ + P 
Sbjct: 18  LIPRIVTCAEPIAAELGLEVVDVVFQTNKKPPVLRIDVRNLSQDTGLEDCERFSRLLDPQ 77

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+ + II G Y LEVSSPG DR +    +F+ + G  V  +      D+++  G +    
Sbjct: 78  LEAQEIIPGAYVLEVSSPGTDRNLTTDREFIAFRGFPVRVKTYAPYKDQKEWCGTLRERD 137

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    L  + +         IAI  + +   +L
Sbjct: 138 EAAIHLNLKGKA--------IAIPRELVAKVQL 162


>gi|262377016|ref|ZP_06070242.1| UPF0090 protein [Acinetobacter lwoffii SH145]
 gi|262308054|gb|EEY89191.1| UPF0090 protein [Acinetobacter lwoffii SH145]
          Length = 174

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD-----------DG----- 62
                +  +I P +E  +     I  L + K  LL+I++++            DG     
Sbjct: 5   NKTQALQDLIAPAVEACNVNLWGIEFLPQGKCSLLRIYIDKPVDESVAPAINEDGEEEQG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + GH VA  +
Sbjct: 65  RGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQMSGYIGHTVALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        ++ E        +  + I   ++  A L+  D
Sbjct: 125 ISAVDNRRKFQAKLVAVDLENEMIQVEVEK-----QQVLEIDSHNIDKANLVFQD 174


>gi|237742965|ref|ZP_04573446.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
 gi|229430613|gb|EEO40825.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
          Length = 156

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I
Sbjct: 4   NNQIVEKITKIVNPFIEEMNLSLVDVEYVQDGGYWYIRIFIENLNGDLNIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++RP+ +  D++R+ G  +   +      K++    I 
Sbjct: 64  EDK--VEGLIEHKFFLEVSSPGLERPLKKIEDYVRFKGEKITLHLKHKLNYKKQFKAVIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +        +K+        +I I F+ +  A +
Sbjct: 122 EVNGDNIIFLIDKK--------EIEIKFNEIRKANI 149


>gi|71901434|ref|ZP_00683524.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
 gi|71728805|gb|EAO30946.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
          Length = 216

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 85/156 (54%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    L      +L+++++     + +  +++ DCE +S+ +S
Sbjct: 24  EIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 83

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 84  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 143

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 144 VEQVGGFV------VLLVNGVELAVDFNNIDKARIV 173


>gi|188577682|ref|YP_001914611.1| hypothetical protein PXO_01301 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188522134|gb|ACD60079.1| YhbC family protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 176

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 12/140 (8%)

Query: 39  RSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQAISPILDVENIIEGHYRL 92
             + +  L       L+++++     + +  + + DCE +S+ +S  LDVE+ I GHY L
Sbjct: 2   ELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGHYTL 61

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE 152
           EVSSPG+DRP+     F R  G      + L+   +++  G+I+                
Sbjct: 62  EVSSPGVDRPLFTLEQFARHAGESTKIVLKLAQDGRRRFQGEILRIDAEA------GAVV 115

Query: 153 KDMNELQIAISFDSLLSARL 172
             ++   + I FD++  AR+
Sbjct: 116 FAIDGKDVQIGFDNIDKARI 135


>gi|255319714|ref|ZP_05360922.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
 gi|262380004|ref|ZP_06073159.1| UPF0090 protein [Acinetobacter radioresistens SH164]
 gi|255303243|gb|EET82452.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
 gi|262298198|gb|EEY86112.1| UPF0090 protein [Acinetobacter radioresistens SH164]
          Length = 174

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD-----------DG----- 62
                +  +I P +E        I  L + K  L++IF+++            DG     
Sbjct: 5   NKTQALHDLIAPAVEACDVELWGIEFLPQGKRSLVRIFIDKPVDENAEPVLNEDGELEQG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  ILDV + I G Y LEVSSPG DRP  +      + G  VA  +
Sbjct: 65  RGIGVQDCVRVTQQVGAILDVHDPISGEYSLEVSSPGWDRPFFQLEQMSAYIGQQVALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        LE+E+   +      + I  +++  A LI  D
Sbjct: 125 ISAVDNRRKFQAKLVSVD-----LEQEQIQVEVEGSKVLEIDSNNIDKANLIYQD 174


>gi|91782987|ref|YP_558193.1| hypothetical protein Bxe_A2822 [Burkholderia xenovorans LB400]
 gi|296158770|ref|ZP_06841599.1| protein of unknown function DUF150 [Burkholderia sp. Ch1-1]
 gi|123358892|sp|Q140U8|RIMP_BURXL RecName: Full=Ribosome maturation factor rimP
 gi|91686941|gb|ABE30141.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
 gi|295890975|gb|EFG70764.1| protein of unknown function DUF150 [Burkholderia sp. Ch1-1]
          Length = 152

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++  G + + DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVVGLGYELVDLE--RTGRGMLCIYIDQPAG-IAIEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V   +      ++   G +        
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVVITLKKPLDGRKSYRGILHAPQGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E +    M +  +A     +  ARL+
Sbjct: 117 GLEFEGKEGAAMLDFTLA----DMDKARLV 142


>gi|28198120|ref|NP_778434.1| hypothetical protein PD0192 [Xylella fastidiosa Temecula1]
 gi|28056180|gb|AAO28083.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
          Length = 216

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 85/156 (54%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    L      +L+++++     + +  +++ DCE +S+ +S
Sbjct: 24  EIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 83

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 84  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 143

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 144 VEQVGGFV------VLLVNGVELAVDFNNIDKARIV 173


>gi|223934078|ref|ZP_03626027.1| protein of unknown function DUF150 [Streptococcus suis 89/1591]
 gi|253752515|ref|YP_003025656.1| hypothetical protein SSUSC84_1671 [Streptococcus suis SC84]
 gi|253754341|ref|YP_003027482.1| hypothetical protein SSU1646 [Streptococcus suis P1/7]
 gi|253756275|ref|YP_003029415.1| hypothetical protein SSUBM407_1719 [Streptococcus suis BM407]
 gi|302024449|ref|ZP_07249660.1| hypothetical protein Ssui0_07814 [Streptococcus suis 05HAS68]
 gi|330833474|ref|YP_004402299.1| hypothetical protein SSUST3_1700 [Streptococcus suis ST3]
 gi|223897248|gb|EEF63660.1| protein of unknown function DUF150 [Streptococcus suis 89/1591]
 gi|251816804|emb|CAZ52447.1| conserved hypothetical protein [Streptococcus suis SC84]
 gi|251818739|emb|CAZ56575.1| conserved hypothetical protein [Streptococcus suis BM407]
 gi|251820587|emb|CAR47343.1| conserved hypothetical protein [Streptococcus suis P1/7]
 gi|319758924|gb|ADV70866.1| hypothetical protein SSUJS14_1808 [Streptococcus suis JS14]
 gi|329307697|gb|AEB82113.1| hypothetical protein SSUST3_1700 [Streptococcus suis ST3]
          Length = 156

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +++ I P I+   +  V +   +   + +L IFV+++ G ++L+D  +LS+ ISP
Sbjct: 3   SIIELVTAAITPAIQ-TPYELVDVEYGKMGGDYVLSIFVDKE-GGISLQDTADLSEKISP 60

Query: 79  ILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           ILD    +     Y LEV+SPG++RP+       +  G  +  ++  +    +   G ++
Sbjct: 61  ILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIHVKLYQAIDKIKVFEGTLL 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               T   +E   +  K     ++ I + ++  ARL V
Sbjct: 121 SFDGTDLIMEYMDKTRKK----EVTIPYQTVAKARLAV 154


>gi|210622609|ref|ZP_03293269.1| hypothetical protein CLOHIR_01217 [Clostridium hiranonis DSM 13275]
 gi|210154110|gb|EEA85116.1| hypothetical protein CLOHIR_01217 [Clostridium hiranonis DSM 13275]
          Length = 154

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 78/148 (52%), Gaps = 2/148 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                +   +  ++  + +E  + +V +  ++E     L++ V+++ G ++L +CEE+S+
Sbjct: 1   MKKSEIVDRVEKMVTAITDEKGYETVDVEYVKEAGQFYLRVVVDKE-GGISLNECEEVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +SP LD  + IE +Y LEVSSPGIDR + R  +F+++ G  V  ++  +    ++  G+
Sbjct: 60  ELSPKLDENDFIEENYYLEVSSPGIDRALKRDKEFVKYKGRDVEIKLYKAIDGVKQFEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAI 162
           ++G  E    +      E   N   +AI
Sbjct: 120 LVGLDEENNIVVIINNEEMKFNRKDVAI 147


>gi|75908092|ref|YP_322388.1| hypothetical protein Ava_1871 [Anabaena variabilis ATCC 29413]
 gi|91208393|sp|Q3MBZ3|RIMP_ANAVT RecName: Full=Ribosome maturation factor rimP
 gi|75701817|gb|ABA21493.1| Protein of unknown function DUF150 [Anabaena variabilis ATCC 29413]
          Length = 153

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 11/157 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I+ +  PV E++    V I     ++  +L++ +     +  L DCE +S+A+   
Sbjct: 5   LVPPITDLAIPVAEQLGLEVVGIVFHTNQRPPVLRVDIRNPQQDTGLDDCERMSRALEAA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R +V   +F+ + G  V          +Q+ IG+++   
Sbjct: 65  LDATEIIPDAYVLEVSSPGISRQLVTDREFISFKGFPVIVSTSPPHEGQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           ET  ++ ++ R         I I    +   R+++ D
Sbjct: 125 ETKVYINQKGRV--------IEIPRSLIT--RVLLHD 151


>gi|94310971|ref|YP_584181.1| hypothetical protein Rmet_2033 [Cupriavidus metallidurans CH34]
 gi|166980260|sp|Q1LLR4|RIMP_RALME RecName: Full=Ribosome maturation factor rimP
 gi|93354823|gb|ABF08912.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 162

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 80/153 (52%), Gaps = 12/153 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S+ ++ +L VEN
Sbjct: 3   LADLIETTLIGMGYELVELERAPAG--LLRVYIDQPETGIVIEDCEKVSRQLTHVLTVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG-- 142
           +   + RLEVSSPG+DRP+ + +DF+R+ G  V   + L    ++  +G +   +     
Sbjct: 61  V--DYERLEVSSPGLDRPLKKLADFVRFAGAEVRVTLRLPVNGQKNFVGILCEPAGDAGA 118

Query: 143 --FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               LE E +    + E  I      +  ARL+
Sbjct: 119 EKIGLEFEGKDGPALLEFAI----SDVDRARLV 147


>gi|169797409|ref|YP_001715202.1| hypothetical protein ABAYE3440 [Acinetobacter baumannii AYE]
 gi|184156668|ref|YP_001845007.1| hypothetical protein ACICU_00348 [Acinetobacter baumannii ACICU]
 gi|213155777|ref|YP_002317822.1| hypothetical protein AB57_0413 [Acinetobacter baumannii AB0057]
 gi|215484848|ref|YP_002327085.1| hypothetical protein ABBFA_003201 [Acinetobacter baumannii
           AB307-0294]
 gi|239500932|ref|ZP_04660242.1| hypothetical protein AbauAB_01325 [Acinetobacter baumannii AB900]
 gi|260556301|ref|ZP_05828520.1| UPF0090 protein [Acinetobacter baumannii ATCC 19606]
 gi|301346316|ref|ZP_07227057.1| hypothetical protein AbauAB0_08725 [Acinetobacter baumannii AB056]
 gi|301513269|ref|ZP_07238506.1| hypothetical protein AbauAB05_16841 [Acinetobacter baumannii AB058]
 gi|301596449|ref|ZP_07241457.1| hypothetical protein AbauAB059_11562 [Acinetobacter baumannii
           AB059]
 gi|332855374|ref|ZP_08435839.1| hypothetical protein HMPREF0021_03428 [Acinetobacter baumannii
           6013150]
 gi|332867630|ref|ZP_08437762.1| hypothetical protein HMPREF0020_01378 [Acinetobacter baumannii
           6013113]
 gi|332873076|ref|ZP_08441033.1| hypothetical protein HMPREF0022_00636 [Acinetobacter baumannii
           6014059]
 gi|226703746|sp|B7H117|RIMP_ACIB3 RecName: Full=Ribosome maturation factor rimP
 gi|226703825|sp|B0VE83|RIMP_ACIBY RecName: Full=Ribosome maturation factor rimP
 gi|226703842|sp|B2I2M5|RIMP_ACIBC RecName: Full=Ribosome maturation factor rimP
 gi|226703866|sp|A3M1K2|RIMP_ACIBT RecName: Full=Ribosome maturation factor rimP
 gi|226706136|sp|B7I3R7|RIMP_ACIB5 RecName: Full=Ribosome maturation factor rimP
 gi|169150336|emb|CAM88233.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|183208262|gb|ACC55660.1| uncharacterized protein conserved in bacteria [Acinetobacter
           baumannii ACICU]
 gi|193076181|gb|ABO10796.2| hypothetical protein A1S_0334 [Acinetobacter baumannii ATCC 17978]
 gi|213054937|gb|ACJ39839.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
 gi|213988150|gb|ACJ58449.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|260410356|gb|EEX03655.1| UPF0090 protein [Acinetobacter baumannii ATCC 19606]
 gi|322506555|gb|ADX02009.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
 gi|323516434|gb|ADX90815.1| hypothetical protein ABTW07_0378 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727506|gb|EGJ58932.1| hypothetical protein HMPREF0021_03428 [Acinetobacter baumannii
           6013150]
 gi|332733824|gb|EGJ64971.1| hypothetical protein HMPREF0020_01378 [Acinetobacter baumannii
           6013113]
 gi|332738588|gb|EGJ69458.1| hypothetical protein HMPREF0022_00636 [Acinetobacter baumannii
           6014059]
          Length = 174

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD-----------DG----- 62
             +  +  +I P +E        I  L + K  LL+I+++R            DG     
Sbjct: 5   NKSQALYDMIAPAVEACGVDLWGIEFLPQGKRSLLRIYIDRPVDENAEPVINEDGEVEQG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + + DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  VA  +
Sbjct: 65  RGIGVEDCVRVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLEQLQGYIGQQVALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        ++ E  G+  ++     I  +++  A LI  D
Sbjct: 125 IAAVENRRKFQAKLLAVDLENEEIQVEVEGKHVLD-----IDSNNIDKANLIYQD 174


>gi|322391043|ref|ZP_08064547.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 903]
 gi|321142273|gb|EFX37747.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 903]
          Length = 159

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ VIQP I+E  F  V +   +   + +L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVDLVTEVIQPAIQE-PFELVDVEYGKMGGDYVLSIFVDKPEG-ITLNDTADLTEIISPL 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  V   +  +   ++   G ++ 
Sbjct: 65  LDQIKPDPFPEQYFLEVTSPGLERPLKTKQALEGALGKYVNISLYKAVEKQKVFEGTLVR 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I ++ +  ARL V
Sbjct: 125 FEEDVLTIEYMDKTRKK----TVEIPYNLVSKARLAV 157


>gi|218247499|ref|YP_002372870.1| hypothetical protein PCC8801_2713 [Cyanothece sp. PCC 8801]
 gi|257061165|ref|YP_003139053.1| hypothetical protein Cyan8802_3390 [Cyanothece sp. PCC 8802]
 gi|226701501|sp|B7K5I1|RIMP_CYAP8 RecName: Full=Ribosome maturation factor rimP
 gi|218167977|gb|ACK66714.1| protein of unknown function DUF150 [Cyanothece sp. PCC 8801]
 gi|256591331|gb|ACV02218.1| protein of unknown function DUF150 [Cyanothece sp. PCC 8802]
          Length = 153

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I ++  P+ E+     V +     K   +L++ +    G  +L DCE +S+A+  +
Sbjct: 5   LIPQIINLATPIAEDRGLEVVDVVFQTNKRPPVLRVDIRNSQGETSLDDCEAVSRALEAV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   ++ G Y LE+SSPGI R +    +F+ + G  V     +   D ++  G++ G  
Sbjct: 65  LDESQVMGGSYVLEISSPGISRQLHSDREFISFKGFAVIVTTEIPYLDHKEWRGQLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E+  ++ ++ R         IAI  + +   +L
Sbjct: 125 ESAVYINQKGRA--------IAIPRELIAKVQL 149


>gi|117927004|ref|YP_867621.1| hypothetical protein Mmc1_3730 [Magnetococcus sp. MC-1]
 gi|189040289|sp|A0LE22|RIMP_MAGSM RecName: Full=Ribosome maturation factor rimP
 gi|117610760|gb|ABK46215.1| protein of unknown function DUF150 [Magnetococcus sp. MC-1]
          Length = 185

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 19/164 (11%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVER------DDGNMTLRDCEEL 72
            +A  + ++     +      V++    E    ++++  ++       + +++L +C  +
Sbjct: 26  DIAQKVEALAIQAAKTEDCEVVEVIYRREGGVYVVRVAADKLPDDQGQERHISLDECGSI 85

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG----DK 128
           S+ IS +LDV ++I   Y LEVSSPGI+RP+++  DF R+ G +V              +
Sbjct: 86  SRQISSLLDVHDVIPNAYHLEVSSPGIERPLIKDGDFTRFAGKLVEIRTYQPMDTESGPR 145

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +K  G ++G  E    +             ++ I ++ +  A L
Sbjct: 146 KKFRGTLLGLQEAMVVV--------AEANGEVRIPWEQVAKAHL 181


>gi|296877070|ref|ZP_06901111.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 15912]
 gi|312867870|ref|ZP_07728075.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
 gi|296431931|gb|EFH17737.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 15912]
 gi|311096625|gb|EFQ54864.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
          Length = 159

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ VIQP I+E  F  V +   +   + +L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVDLVTEVIQPAIKE-PFELVDVEYGKMGGDYVLSIFVDKPEG-ITLNDTADLTEIISPL 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  V   +  +   ++   G ++G
Sbjct: 65  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEALEGAVGKYVNISLYKAVEKQKVFEGNLVG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I ++ +  ARL V
Sbjct: 125 FEEDVLTIEYMDKTRKK----TVDIPYNLVSKARLAV 157


>gi|262374025|ref|ZP_06067302.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262311036|gb|EEY92123.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 174

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD-----------DG----- 62
             +  +  +I P +         I  L + K  LL+I++++            DG     
Sbjct: 5   NKSQALHDLIAPAVAACGVDLWGIEFLPQGKRSLLRIYIDKPVDENAEPILNEDGELEQG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  + +    + G  VA  +
Sbjct: 65  RGIGVQDCVLVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLNQLPAYIGQQVALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        ++ E  G+       + I  +++  A LI  D
Sbjct: 125 IAAVENRRKFQAKLLSVDLENELIQVEVEGKH-----VLEIDSNNIDKANLIYQD 174


>gi|322391411|ref|ZP_08064881.1| essential protein [Streptococcus peroris ATCC 700780]
 gi|321145837|gb|EFX41228.1| essential protein [Streptococcus peroris ATCC 700780]
          Length = 207

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 55  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 112

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 113 LDTIKPDPFPEQYFLEITSPGLERPLKTKEAVAGAVGKYIHVGLYQAIDKQKVFEGTLLS 172

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I ++ +  ARL V
Sbjct: 173 FEEDELTMEYMDKTRKK----TVQIPYNLVSKARLAV 205


>gi|119485068|ref|ZP_01619453.1| hypothetical protein L8106_06459 [Lyngbya sp. PCC 8106]
 gi|119457296|gb|EAW38421.1| hypothetical protein L8106_06459 [Lyngbya sp. PCC 8106]
          Length = 172

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 9/150 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV E +    V  +        +L++ +   + +  L DCE++S+A+   
Sbjct: 24  LVPKIIDLATPVAEALGLEVVGAVFYTNHSPPVLRVDIRNPNQDTGLDDCEQMSRALEEQ 83

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LE+SSPGI + +    DF+ + G  +      +    ++  GK++   
Sbjct: 84  LDTIDFIPDAYVLEISSPGISQILTSDRDFISFKGFPILIRTSEAYKGYKEWSGKLIRRD 143

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
           ET  +L ++ R        Q+AI    +  
Sbjct: 144 ETAVYLNQKGR--------QMAIPRPVIAE 165


>gi|296328567|ref|ZP_06871086.1| probable cytoplasmic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154376|gb|EFG95175.1| probable cytoplasmic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 156

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I
Sbjct: 4   NNQIVEKITRIVNPFIEEMNLSLVDVEYVQDGGYWYVRIFIENLNGDLNIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              +  E +IE  + LEVSSPG++RP+ +  D+ R+ G  +   +     DK++    I 
Sbjct: 64  EDKI--EELIEHKFFLEVSSPGLERPLKKLEDYTRFIGEKITLHLKHKLDDKKQFKTIIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +        +K+        ++ I F+ +  A +
Sbjct: 122 EVNGDNIIFLMDKK--------EVEIKFNEIRKANI 149


>gi|268608288|ref|ZP_06142015.1| hypothetical protein RflaF_02144 [Ruminococcus flavefaciens FD-1]
          Length = 157

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +  +I+P+ +E+ +    +  ++E     L+IF+++D+G +++ DCE  +  IS 
Sbjct: 8   GTEQKVYDLIKPITDELGYYLWDVCYVKEGAMWYLRIFIDQDEG-ISIDDCERATAPISD 66

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD  + +   Y LEV S G++R +V++  F    G  V  +   +   ++++  +++G 
Sbjct: 67  ILDEADPVPQQYMLEVGSAGLERELVKEEHFEVCKGDTVTLKFFRAVDGEKEIRAELVGA 126

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            + G  + KE   EK        I    +   +L
Sbjct: 127 DKDGITVIKEDGTEK-------TIPLADVSVVKL 153


>gi|169634555|ref|YP_001708291.1| hypothetical protein ABSDF3182 [Acinetobacter baumannii SDF]
 gi|226703734|sp|B0VLU4|RIMP_ACIBS RecName: Full=Ribosome maturation factor rimP
 gi|169153347|emb|CAP02460.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 174

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVER-----------DDG----- 62
             +  +  +I P +E        I  L + K  LL+I+++R           +DG     
Sbjct: 5   NKSQALYDMIAPAVEACGVDLWGIEFLPQGKRSLLRIYIDRTVDENAEPVINEDGEVEQG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + + DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  VA  +
Sbjct: 65  RGIGVEDCVRVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLEQLQGYIGQQVALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        ++ E  G+  ++     I  +++  A LI  D
Sbjct: 125 IAAVENRRKFQAKLLAVDLENEEIQVEVEGKHVLD-----IDSNNIDKANLIYQD 174


>gi|170696461|ref|ZP_02887587.1| protein of unknown function DUF150 [Burkholderia graminis C4D1M]
 gi|209520194|ref|ZP_03268965.1| protein of unknown function DUF150 [Burkholderia sp. H160]
 gi|295676259|ref|YP_003604783.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1002]
 gi|307730030|ref|YP_003907254.1| hypothetical protein BC1003_2000 [Burkholderia sp. CCGE1003]
 gi|323525723|ref|YP_004227876.1| hypothetical protein BC1001_1380 [Burkholderia sp. CCGE1001]
 gi|170138614|gb|EDT06816.1| protein of unknown function DUF150 [Burkholderia graminis C4D1M]
 gi|209499353|gb|EDZ99437.1| protein of unknown function DUF150 [Burkholderia sp. H160]
 gi|295436102|gb|ADG15272.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1002]
 gi|307584565|gb|ADN57963.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1003]
 gi|323382725|gb|ADX54816.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1001]
          Length = 152

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 9/150 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++  G + + DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVVGLGYELVDLE--RTGRGMLCIYIDQPAG-IAIEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +        
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEAVITLKKPLDGRKSYRGILHAPQGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            LE E +    M +  +A     +  ARL+
Sbjct: 117 GLEFEGKEGAAMLDFTLA----DMDKARLV 142


>gi|260550520|ref|ZP_05824730.1| UPF0090 protein [Acinetobacter sp. RUH2624]
 gi|260406435|gb|EEW99917.1| UPF0090 protein [Acinetobacter sp. RUH2624]
          Length = 174

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD-----------DG----- 62
             +  +  +I P ++        I  L + K  LL+I+++R            DG     
Sbjct: 5   NKSQALYDMIAPAVQACGVDLWGIEFLPQGKRSLLRIYIDRPVDENAEPVINEDGEVEQG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  VA  +
Sbjct: 65  RGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQSYIGQQVALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        LE E+   +   +  + I  +++  A LI  D
Sbjct: 125 IAAVENRRKFQAKLLAVD-----LENEEIKVEVEGKHVLDIDSNNIDKANLIYQD 174


>gi|259016317|sp|B0U1Q6|RIMP_XYLFM RecName: Full=Ribosome maturation factor rimP
          Length = 199

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 85/156 (54%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    +      +L+++++     + +  +++ DCE +S+ +S
Sbjct: 7   EIVNLLAPKVEMLGFDLLGAEYVLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 67  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 127 VEQVGGFV------VLLVNGVELAVDFNNIDKARIV 156


>gi|307155147|ref|YP_003890531.1| hypothetical protein Cyan7822_5377 [Cyanothece sp. PCC 7822]
 gi|306985375|gb|ADN17256.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7822]
          Length = 153

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I  +  P+ E++    V++     K   +L++ +     + +L DCE++S+++   
Sbjct: 5   VIPQIIDLATPIAEQLGLEIVEVVFQTNKRPPVLRVDIRNKSSDTSLNDCEQMSRSLEAN 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   +I G Y LE+SSPGI R +    +F+ + G  +  +      ++++  GK+ G  
Sbjct: 65  LDATELIPGSYVLEISSPGISRQLNSDREFIVFKGFDIIVKTDTPFENQKEWRGKLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L K+ R         IAI    +   +L
Sbjct: 125 EQAVYLNKKGRV--------IAIPRQLITKVQL 149


>gi|322387177|ref|ZP_08060787.1| hypothetical protein HMPREF9423_0185 [Streptococcus infantis ATCC
           700779]
 gi|321141706|gb|EFX37201.1| hypothetical protein HMPREF9423_0185 [Streptococcus infantis ATCC
           700779]
          Length = 183

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 31  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 88

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 89  LDTIKPDPFPEQYFLEITSPGLERPLKTKEAVAGAVGKYIHVGLYQAIDKQKVFEGTLLS 148

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I ++ +  ARL V
Sbjct: 149 FEEDELTMEYMDKTRKK----TVRIPYNLVSKARLAV 181


>gi|294101967|ref|YP_003553825.1| protein of unknown function DUF150 [Aminobacterium colombiense DSM
           12261]
 gi|293616947|gb|ADE57101.1| protein of unknown function DUF150 [Aminobacterium colombiense DSM
           12261]
          Length = 159

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 7/153 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +S+ ++ ++E + +  V +   +E KNL ++++++   G +T++DCE +S+++S  LD
Sbjct: 9   EKLSASLRQIVESLGYECVGVVFAQESKNLYVKVYID-VLGGITVKDCETVSRSLSRYLD 67

Query: 82  VEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             +  +   Y LEV S G+DRP+    D+ R+ G  V          +++  G I+    
Sbjct: 68  ENDSALPDRYFLEVGSAGLDRPLFSLDDYARFAGKKVKIRCQTLVEGRKRFTGTILSVDN 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 K    + + ++ ++ I F S+    L+
Sbjct: 128 AT----KTVCVQLEESDQKVEIPFASIQKGNLV 156


>gi|288904584|ref|YP_003429805.1| hypothetical protein GALLO_0368 [Streptococcus gallolyticus UCN34]
 gi|306830579|ref|ZP_07463746.1| protein of hypothetical function DUF150 [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325977558|ref|YP_004287274.1| hypothetical protein SGGBAA2069_c03580 [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288731309|emb|CBI12860.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
 gi|304427297|gb|EFM30402.1| protein of hypothetical function DUF150 [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325177486|emb|CBZ47530.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 177

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ V+ P I+E  F  V +   +   + +L I +++ +G +T+ D  EL++ ISP+
Sbjct: 25  IINVVTEVVAPAIKE-PFELVDVEYEKMGSDYVLSILIDKPEG-ITVDDTAELTEIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEVSSPG++RP+  K    +  G  V   +  +    +   G ++ 
Sbjct: 83  LDAIKPDPFPEQYMLEVSSPGLERPLKTKEALEKAVGSYVNVSLYKAIDKVKVFQGDLVA 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  ++   +  K      + I + ++  ARL V
Sbjct: 143 FDGDTLTIDYLDKTRKK----TVEIPYSTVAKARLAV 175


>gi|222153584|ref|YP_002562761.1| hypothetical protein SUB1470 [Streptococcus uberis 0140J]
 gi|259645120|sp|B9DVC1|RIMP_STRU0 RecName: Full=Ribosome maturation factor rimP
 gi|222114397|emb|CAR43160.1| conserved hypothetical protein [Streptococcus uberis 0140J]
          Length = 158

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 70/162 (43%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   +   + PVIE   +  V +   +   + +L +FV+++ G +++ D   L++
Sbjct: 1   MANQTIIDTVMKTVSPVIEP-PYELVDVEYEKMGSDYILSVFVDKE-GGISVEDTVTLTE 58

Query: 75  AISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+       +  G  V   +  +    +   
Sbjct: 59  LISPLLDAIHPDPFPEQYMLEVSSPGLERPLKTPEALTKAIGSYVNVSLYKAIDKVKVFQ 118

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        +    +  +      + I + ++  ARL V
Sbjct: 119 GDLVAFDGDTLTIHYLDKTRQK----TVEIPYQTVAKARLAV 156


>gi|258645577|ref|ZP_05733046.1| hypothetical protein GCWU000321_00427 [Dialister invisus DSM 15470]
 gi|260402935|gb|EEW96482.1| hypothetical protein GCWU000321_00427 [Dialister invisus DSM 15470]
          Length = 156

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 86/157 (54%), Gaps = 9/157 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   +  +   +++P ++++    + +  + E+N +L++F++++DG + L DC+++S+ 
Sbjct: 1   MGRKEIELEAERLLEPALKQLGIELIDVEYVRERNWILRVFIDKEDG-VDLNDCQQISEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS---SGDKQKLI 132
              +LD  ++I  +Y LEVSSPG+DR + +  DFLR+ G  V  ++       G  +   
Sbjct: 60  AGELLDEADLISANYMLEVSSPGLDRVLKKDKDFLRYAGEEVDVKLFAPLEEVGGVKAFT 119

Query: 133 GKIMGTSETG-FFLEKEKR----GEKDMNELQIAISF 164
             + G S+ G   L  + +    G+  +++++I  SF
Sbjct: 120 AVLDGLSDDGQIRLIFQDKTITLGKDKISQIRIHFSF 156


>gi|189183524|ref|YP_001937309.1| hypothetical protein OTT_0617 [Orientia tsutsugamushi str. Ikeda]
 gi|254806539|sp|B3CR92|RIMP_ORITI RecName: Full=Ribosome maturation factor rimP
 gi|189180295|dbj|BAG40075.1| hypothetical protein OTT_0617 [Orientia tsutsugamushi str. Ikeda]
          Length = 160

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/167 (31%), Positives = 93/167 (55%), Gaps = 9/167 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           L   I  +I P  + + ++ + ++ +  K  +L+I ++R D+  + + DC+  S+AIS +
Sbjct: 2   LNDKIKELITPTAKALGYKVINVNFV-VKPAILKIVIDRFDEKKVKVLDCQAFSKAISAV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVENII G Y LEV S GI+R ++   DF+++ G+ +  ++V +  + +K IG I    
Sbjct: 61  LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
                L  +       N+  IAI +D++  A+++ TDE+ R    NY
Sbjct: 121 GQEITLNLQ-------NDSTIAIDYDNIKVAKIVFTDEMFRQITKNY 160


>gi|241662812|ref|YP_002981172.1| hypothetical protein Rpic12D_1208 [Ralstonia pickettii 12D]
 gi|309782265|ref|ZP_07676993.1| hypothetical protein HMPREF1004_03620 [Ralstonia sp. 5_7_47FAA]
 gi|240864839|gb|ACS62500.1| protein of unknown function DUF150 [Ralstonia pickettii 12D]
 gi|308918958|gb|EFP64627.1| hypothetical protein HMPREF1004_03620 [Ralstonia sp. 5_7_47FAA]
          Length = 162

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 12/153 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN
Sbjct: 3   LTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAENGVVIEDCEKVSHQLTRVFEVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE---- 140
           +   + RLEVSSPG+DRP+   +DF R+ G      + L    ++   G I   +     
Sbjct: 61  V--NYERLEVSSPGLDRPLRTLADFTRFAGLEAKVTLRLPVNGQKNFTGIIQAPTGEPGQ 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               LE E +         +  +   L  ARL+
Sbjct: 119 ERIGLEFEGK----EGPALLEFTLSELDRARLV 147


>gi|260495124|ref|ZP_05815253.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
 gi|260197567|gb|EEW95085.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
          Length = 156

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 11/157 (7%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
           G+  +   I+ ++ P +EEM+   V +  +++     ++IF+E  +G++++ DC +LS  
Sbjct: 3   GNNQIVEKITEIVNPFVEEMNLSLVDVEYVQDGAYWYIRIFIENLNGDLSIEDCSKLSSK 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I   +  E +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I
Sbjct: 63  IEDKI--EKLIEHKFFLEVSSPGLERPLKKIEDYIRFTGEKITLHLKHKLDDKKQFKAII 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +        +K+        +I I F+ +    +
Sbjct: 121 KEVNGDNIIFLIDKK--------EIEIKFNEIRKTNI 149


>gi|284108774|ref|ZP_06386439.1| protein of unknown function DUF150 [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829848|gb|EFC34139.1| protein of unknown function DUF150 [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 157

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 83/154 (53%), Gaps = 4/154 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   +  + +P+ + +    +++    +    ++++ VE++ G + ++DCE+  Q++  
Sbjct: 3   GLGSLVQGIAEPIAKALRLEIIEVECHGQGAKTIVRVIVEKE-GGVGIQDCEQFHQSLGR 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDV + +   YRL+VSSPG+DRP+ R+ D+ +  G  +  ++      K  ++G++   
Sbjct: 62  ALDVADPVAHAYRLDVSSPGLDRPLKRRKDYDQAVGRTIRVKVHAPVQGKGTVVGQLAEV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            + G  L+   R  K     ++A+ +D++  A+L
Sbjct: 122 DDQGITLQVPVR--KSRTPRRVALEWDAIAHAKL 153


>gi|320547938|ref|ZP_08042221.1| protein of hypothetical function DUF150 [Streptococcus equinus ATCC
           9812]
 gi|320447478|gb|EFW88238.1| protein of hypothetical function DUF150 [Streptococcus equinus ATCC
           9812]
          Length = 150

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 9/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ V+ P I+E  F  V +   +   + +L I +++  G +T+ D  +L++ ISP+LD  
Sbjct: 2   VTEVVAPAIKE-PFELVDVEYGKMGSDYVLSILIDKP-GGITVNDTADLTEIISPLLDAI 59

Query: 84  --NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEVSSPG++RP+  K    +  G  V   +  +    +   G ++     
Sbjct: 60  KPDPFPEQYMLEVSSPGLERPLKTKEALEKAVGSYVNVSLYKAIDKVKVFQGDLVAFDGE 119

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++   +  K      + I + ++  ARL V
Sbjct: 120 TLTIDYLDKTRKK----TVEIPYSTVAKARLAV 148


>gi|91208368|sp|Q3SKW9|RIMP_THIDA RecName: Full=Ribosome maturation factor rimP
          Length = 142

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+ + ++PV+  + +  V +        LL+IF+++  G +T+ DC  +S  ++ +  VE
Sbjct: 3   DLPARLEPVLAGLGYELVMLE--RAGRGLLRIFIDKP-GGVTIDDCVAVSNHLTHLFTVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+V+  D+ R+ G  V  ++ +   ++++L G+++G      
Sbjct: 60  NI--DYDRLEVSSPGLDRPLVKPQDYARFAGEQVTLKLRVPMDNRRRLSGQLLGLESDAV 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L  + R        ++++   ++ +ARL
Sbjct: 118 KLVVDGR--------EMSVDLRNVDAARL 138


>gi|182680748|ref|YP_001828908.1| hypothetical protein XfasM23_0177 [Xylella fastidiosa M23]
 gi|226695961|sp|B2I724|RIMP_XYLF2 RecName: Full=Ribosome maturation factor rimP
 gi|259016318|sp|Q87EV6|RIMP_XYLFT RecName: Full=Ribosome maturation factor rimP
 gi|182630858|gb|ACB91634.1| protein of unknown function DUF150 [Xylella fastidiosa M23]
          Length = 199

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 85/156 (54%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    L      +L+++++     + +  +++ DCE +S+ +S
Sbjct: 7   EIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 67  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 127 VEQVGGFV------VLLVNGVELAVDFNNIDKARIV 156


>gi|262370082|ref|ZP_06063409.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315121|gb|EEY96161.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 174

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 76/175 (43%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVER-----------DDG----- 62
                +  +I P ++        I  L + K  LL+I++++           +DG     
Sbjct: 5   NKTQALQDLIAPAVQACGVDLWGIEFLPQGKRSLLRIYIDKAVDENAEPIINEDGEEEQG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  ++DV + I G Y LEVSSPG DRP  +      + G  +A  +
Sbjct: 65  RGIGVQDCVRVTQQVGAMMDVHDPISGEYALEVSSPGWDRPFFQLEQLPAYIGQQIAFRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        ++ E        +  + I  +++  A L+  D
Sbjct: 125 ISAVDNRRKFQAKLVAVDLEAEMIQVEVEK-----QQVLEIDSNNIDKANLVYQD 174


>gi|16124301|ref|NP_418865.1| hypothetical protein CC_0045 [Caulobacter crescentus CB15]
 gi|13421139|gb|AAK22033.1| conserved hypothetical protein [Caulobacter crescentus CB15]
          Length = 160

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 11/149 (7%)

Query: 47  EEKNLLLQIFVERD------DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGID 100
             +   LQI  E         G+M + DC +LS+A+S +LD  + I G Y LEVSSPGID
Sbjct: 3   GTEQRRLQIMAEHPLLEDGSGGDMNVEDCAKLSRAVSEVLDAADPIAGEYTLEVSSPGID 62

Query: 101 RPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQI 160
           RP+ R  DF  + G     E+   +  +++  G++ G  +    L  E       +++ +
Sbjct: 63  RPLTRLKDFDDYAGLEARIELDRVAEGRKRFKGELAGVEDDQVGLNIEGE-----DDVTV 117

Query: 161 AISFDSLLSARLIVTDELLRASLNNYGSY 189
              F  ++ A+L++TD L+        + 
Sbjct: 118 YFPFAWVIDAKLVMTDALMERGAKQRAAR 146


>gi|186685821|ref|YP_001869017.1| hypothetical protein Npun_R5776 [Nostoc punctiforme PCC 73102]
 gi|226707751|sp|B2J958|RIMP_NOSP7 RecName: Full=Ribosome maturation factor rimP
 gi|186468273|gb|ACC84074.1| protein of unknown function DUF150 [Nostoc punctiforme PCC 73102]
          Length = 153

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV EE+    V +     +   +L++ +     +  L DCE +S+A+   
Sbjct: 5   LVPQIIDLATPVAEELGLEVVGVVFHTHQSPPVLRVDIRNPQQDTGLNDCERMSRALEAS 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+   Y LEVSSPGI R +V   +F+ + G  V          +Q+ IG+++   
Sbjct: 65  LDAAEIVPDTYVLEVSSPGISRQLVTDREFISFKGFPVIISTTPPYDGQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L ++ R         + I    +   +L
Sbjct: 125 EITLYLNQKGRV--------VEIPRSLITKVQL 149


>gi|148284845|ref|YP_001248935.1| hypothetical protein OTBS_1566 [Orientia tsutsugamushi str.
           Boryong]
 gi|254800562|sp|A5CEN4|RIMP_ORITB RecName: Full=Ribosome maturation factor rimP
 gi|146740284|emb|CAM80659.1| conserved hypothetical protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 160

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/167 (31%), Positives = 93/167 (55%), Gaps = 9/167 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           L   I  +I P  + + ++ + +S +  K  +L+I ++R D+  + + DC+  S+AIS +
Sbjct: 2   LNDKIKELITPTAKTLGYKVINVSFI-VKPAILKIVIDRFDEKKVNVLDCQVFSKAISAV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVENII G Y LEV S GI+R ++   DF+++ G+ +  ++V +  + +K IG I    
Sbjct: 61  LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
                L  +       N+  IAI +D++  A+++ TDE+ R    NY
Sbjct: 121 GQEITLNLQ-------NDSTIAIDYDNIKVAKIVFTDEMFRQITKNY 160


>gi|313885302|ref|ZP_07819053.1| conserved hypothetical protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619408|gb|EFR30846.1| conserved hypothetical protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 157

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 8/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +I+  +     R V +  L+E  N  L+++ ++ DG + L DC  +S+ +S  
Sbjct: 4   VLEKVRPIIEETVAANDCRLVDLEYLKEGPNWYLRVYADK-DGGIDLDDCAFISEKLSEA 62

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEVSSPG +RP+   +D     G  V  +  +    ++   G ++ 
Sbjct: 63  LDLIKPDPFPKSYYLEVSSPGAERPLKTAADIEAAVGEYVHFDYYVPQYGEKFHEGNLLA 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +T + +E + +  +     ++ I   ++  ARL +
Sbjct: 123 VEDTLYRIEVKDKTRRK----ELEIDKKAVAKARLAI 155


>gi|187928208|ref|YP_001898695.1| hypothetical protein Rpic_1115 [Ralstonia pickettii 12J]
 gi|226696216|sp|B2UAA1|RIMP_RALPJ RecName: Full=Ribosome maturation factor rimP
 gi|187725098|gb|ACD26263.1| protein of unknown function DUF150 [Ralstonia pickettii 12J]
          Length = 162

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 12/153 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN
Sbjct: 3   LTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAENGVVIEDCEKVSHQLTRVFEVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE---- 140
           +   + RLEVSSPG+DRP+   +DF R+ G      + L    ++   G I   +     
Sbjct: 61  V--NYERLEVSSPGLDRPLRTLADFTRFAGLEAKVTLRLPVDGQKNFTGIIQAPTGEPGQ 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               LE E +         +  +   L  ARL+
Sbjct: 119 ERIGLEFEGK----EGPALLGFTLSELDRARLV 147


>gi|282898465|ref|ZP_06306455.1| Protein of unknown function DUF150 [Raphidiopsis brookii D9]
 gi|281196631|gb|EFA71537.1| Protein of unknown function DUF150 [Raphidiopsis brookii D9]
          Length = 163

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+  E+    V +     +   +L++ +     + +L DCE++S+A+   
Sbjct: 15  LVPQIIDLATPLAAELGLEVVGMVFHTNQCPPILRVDIRNPQQDTSLNDCEKMSRALESY 74

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R +    +F+ + G  V          +++  G+++   
Sbjct: 75  LDAAGIIPDTYVLEVSSPGISRQLETDREFISFKGFPVVVSTCDPDDGEKEWKGQLIRRD 134

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           ET  +L ++ R    +  L   +  D 
Sbjct: 135 ETKIYLNQKGRVVGILRSLVTKVQLDD 161


>gi|302342323|ref|YP_003806852.1| hypothetical protein Deba_0888 [Desulfarculus baarsii DSM 2075]
 gi|301638936|gb|ADK84258.1| protein of unknown function DUF150 [Desulfarculus baarsii DSM 2075]
          Length = 161

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 11/157 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +I+PV+       V++    E    +L++FV+R  G +TL DC  +S+ +S +
Sbjct: 12  LGRRLMELIEPVVRSEGLVLVELQWRPENAGQVLRLFVDRPAGGVTLDDCSLISRQVSDL 71

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG--DKQKLIGKIMG 137
           LDVE+ I G YRLEVSSPG++R +    +++ + G +    I         + L G+++G
Sbjct: 72  LDVEDPIGGAYRLEVSSPGLERRLKSAREYVIFAGRMAKLVIRDDGEKSGNRVLHGRLLG 131

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + R          A     ++ A L+V
Sbjct: 132 LQGDDVLIEIDGR--------PTATPLAQVVKANLMV 160


>gi|160932905|ref|ZP_02080294.1| hypothetical protein CLOLEP_01746 [Clostridium leptum DSM 753]
 gi|156867979|gb|EDO61351.1| hypothetical protein CLOLEP_01746 [Clostridium leptum DSM 753]
          Length = 167

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 4/127 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +  + +P++++       +  L+E     L+++++R +G +T+ DCE +S+AI  
Sbjct: 9   GTVEAVWDLCEPIVKDFGLELWDVRYLKEGAQWYLRVYIDRQEG-VTIEDCENVSRAIDE 67

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMG 137
            LD  + ++  Y LEV SPG++R +VR   F R+ G  V  +++      +++  G + G
Sbjct: 68  PLDRLDPVDQSYCLEVCSPGLERELVRPEHFQRFEGWPVMVKLIRPLDSGEREFNGVL-G 126

Query: 138 TSETGFF 144
           T E G F
Sbjct: 127 TYENGVF 133


>gi|322386002|ref|ZP_08059642.1| protein of hypothetical function DUF150 [Streptococcus cristatus
           ATCC 51100]
 gi|321269985|gb|EFX52905.1| protein of hypothetical function DUF150 [Streptococcus cristatus
           ATCC 51100]
          Length = 164

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I+E  +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 12  IVELVREVIEPAIQE-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPL 69

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +    +   G ++G
Sbjct: 70  LDSIKPDPFPDQYFLEVTSPGLERPLKTKEAVAAAVGSYIHVSLYKALDKNKVFEGTLLG 129

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    +E   +  K     ++ I ++ +  ARL V
Sbjct: 130 FEDDVLLMEYMDKTRKK----EVEIPYNLVSKARLAV 162


>gi|257463890|ref|ZP_05628276.1| putative cytoplasmic protein [Fusobacterium sp. D12]
 gi|317061419|ref|ZP_07925904.1| conserved hypothetical protein [Fusobacterium sp. D12]
 gi|313687095|gb|EFS23930.1| conserved hypothetical protein [Fusobacterium sp. D12]
          Length = 153

 Score =  144 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 11/153 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              I  ++ P  E++    V +  +++     ++I+VE+ DG++ L DC  LS  I   +
Sbjct: 5   VQKIEKIVTPEAEKLGLSLVDVEYMQDGGYWYVRIYVEKLDGDVNLEDCANLSGNIEDAV 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D   +I+  + LEVSSPGI+RP+ +++DF+R+ G  +   +     +K+ + G ++    
Sbjct: 65  DQ--LIDKKFFLEVSSPGIERPLKKEADFIRFTGEKIFVALKHKIHEKRNVEGILLAYEN 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                        ++   ++ I F  +  + L+
Sbjct: 123 QT--------LLLEVEGEELQIPFSEVKKSHLV 147


>gi|182683485|ref|YP_001835232.1| hypothetical protein SPCG_0515 [Streptococcus pneumoniae CGSP14]
 gi|225858390|ref|YP_002739900.1| hypothetical protein SP70585_0612 [Streptococcus pneumoniae 70585]
 gi|182628819|gb|ACB89767.1| hypothetical protein SPCG_0515 [Streptococcus pneumoniae CGSP14]
 gi|225720853|gb|ACO16707.1| conserved hypothetical protein [Streptococcus pneumoniae 70585]
          Length = 183

 Score =  144 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 31  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPV 88

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 89  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 148

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 149 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 181


>gi|119511040|ref|ZP_01630160.1| hypothetical protein N9414_09856 [Nodularia spumigena CCY9414]
 gi|119464291|gb|EAW45208.1| hypothetical protein N9414_09856 [Nodularia spumigena CCY9414]
          Length = 153

 Score =  144 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 12/158 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV  E+    V I     ++  +L++ +     +  L DCE +S+A+   
Sbjct: 5   LVPQIIDLATPVAAELGLEVVGIVFHTNQRPPVLRVDIRNSQQDTGLNDCERMSRALEAS 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R ++   +F+ + G  V          +Q+ IG+++   
Sbjct: 65  LDAAEIIPDAYVLEVSSPGISRQLITDREFISFKGFPVIISTSQPYDGQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
           ET  +L ++ R         I I    +     ++ DE
Sbjct: 125 ETTVYLNQKGRI--------IEIPRTLITR---VLLDE 151


>gi|259645133|sp|B1XI06|RIMP_SYNP2 RecName: Full=Ribosome maturation factor rimP
          Length = 153

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I +  +P+  E+    V +     K   +L+I V     +  L DCE  S+ + P 
Sbjct: 5   LIPRIVTCAEPIAAELGLEVVDVVFQTNKKPPVLRIDVRNLSQDTGLEDCERFSRLLDPQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+ + II G Y LEVSSPG DR +    +F+ + G  V  +      D+++  G +    
Sbjct: 65  LEAQEIIPGAYVLEVSSPGTDRNLTTDREFIAFRGFPVRVKTYAPYKDQKEWCGTLRERD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    L  + +         IAI  + +   +L
Sbjct: 125 EAAIHLNLKGKA--------IAIPRELVAKVQL 149


>gi|312898334|ref|ZP_07757724.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310620253|gb|EFQ03823.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 153

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 81/154 (52%), Gaps = 6/154 (3%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +S  ++ +I       V +  + E++  L++F++++ G + L DC+ +S+ 
Sbjct: 1   MKRSDIEQLVSQEVETIIAGTDLELVDVEYVRERDWYLRVFIDKE-GGVGLEDCQAVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDV++ I   Y LEVSSPG+DR + + +DF+R+    V           + L  ++
Sbjct: 60  LSEFLDVKDPITDKYLLEVSSPGLDRILKKDTDFVRYKDRHVDVHFFTPYKGVKSLTARL 119

Query: 136 MGTSETGFF---LEKEKRG--EKDMNELQIAISF 164
           +G  ++G     +++E      KD++++++ I F
Sbjct: 120 VGKDKSGVVHLLIDEEDAAIDSKDISQIRLHIDF 153


>gi|319939748|ref|ZP_08014105.1| ribosome maturation factor rimP [Streptococcus anginosus 1_2_62CV]
 gi|319811086|gb|EFW07397.1| ribosome maturation factor rimP [Streptococcus anginosus 1_2_62CV]
          Length = 162

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+E  +  V I   +   + +L IFV++  G +T+ D  +L+  ISP+
Sbjct: 10  IVELVKEVVEPVIQE-PYELVNIDYGKMGSDHVLSIFVDK-SGGITVNDTADLTDIISPL 67

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +    +   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGQYIHVSLYQAVDKSKTFEGTLLS 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K +    + I +  +  ARL V
Sbjct: 128 FEEDHLTMEYMDKTRKKV----VQIPYKLVSKARLAV 160


>gi|300361903|ref|ZP_07058080.1| protein of hypothetical function DUF150 [Lactobacillus gasseri
           JV-V03]
 gi|300354522|gb|EFJ70393.1| protein of hypothetical function DUF150 [Lactobacillus gasseri
           JV-V03]
          Length = 172

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 16  TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 75

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 76  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++    LE + +  +     +I I   ++ S+R  V
Sbjct: 136 KDLNQDQIVLEVKIKTRRK----EITIPRKTIASSRFAV 170


>gi|163815207|ref|ZP_02206584.1| hypothetical protein COPEUT_01365 [Coprococcus eutactus ATCC 27759]
 gi|158449402|gb|EDP26397.1| hypothetical protein COPEUT_01365 [Coprococcus eutactus ATCC 27759]
          Length = 129

 Score =  144 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 42  QISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGID 100
            +  ++E  +  L+++ +++ G +T+ DCE +++A+  +LD E+ I   Y LEVSSPG+ 
Sbjct: 2   DVEYVKEGSDYYLRVYADKE-GGITINDCEIVNRALGDLLDQEDYISDAYILEVSSPGLT 60

Query: 101 RPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQI 160
           RP+ +++DF R  G VV  +  +     ++  G +    +    +E E        E ++
Sbjct: 61  RPLKKENDFKRSIGKVVEIKTFVKINGAKEFEGVLKAYDDATVTIEFED-------ETEV 113

Query: 161 AISFDSLLSARLI 173
            IS   +   RL 
Sbjct: 114 TISRKDISMIRLA 126


>gi|315652149|ref|ZP_07905147.1| protein of hypothetical function DUF150 [Eubacterium saburreum DSM
           3986]
 gi|315485641|gb|EFU76025.1| protein of hypothetical function DUF150 [Eubacterium saburreum DSM
           3986]
          Length = 166

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 6/148 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                  ++ +  E+ F  V I  ++E     L+++ +  DG + + DC E+S+ +S  L
Sbjct: 20  VKRTEEFLEKLSSELKFELVDIEFVKEAGEYYLRVYCDM-DGGIGIEDCAEISRHLSDWL 78

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y LEVSSPG+ R + +  DFLR  G  V  ++  +    +   G +     
Sbjct: 79  DEEDFIDEGYILEVSSPGLGRTLKKDKDFLRELGKEVELKLYKARDGVKDFEGVLKSFDG 138

Query: 141 TGFFLEKEKRGE----KDMNELQIAISF 164
               +E E + E    K++  +++ I F
Sbjct: 139 ENITVETEVKDEVFTKKEIANIRLKIDF 166


>gi|313906215|ref|ZP_07839561.1| protein of unknown function DUF150 [Eubacterium cellulosolvens 6]
 gi|313468945|gb|EFR64301.1| protein of unknown function DUF150 [Eubacterium cellulosolvens 6]
          Length = 157

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 3/129 (2%)

Query: 36  MSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
           M++  V +  ++E     L+ + +++ G +T+ DCE +S+A    LD  ++IE  Y LEV
Sbjct: 23  MNYEFVDLEYVKEAGTWYLRAYADKE-GGITVDDCEIISRAFEEKLDAADLIEEAYILEV 81

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL-EKEKRGEK 153
           SSPG+ RP+ ++ D++R  G  V          +++  G +    +    +   E   E 
Sbjct: 82  SSPGLGRPLKKERDYVRAMGQRVEIRTYKIINHEKEFTGVLQAYDDQSVTIVSDEDEQEM 141

Query: 154 DMNELQIAI 162
              +  IA+
Sbjct: 142 IFQKPDIAL 150


>gi|168492709|ref|ZP_02716852.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|183576817|gb|EDT97345.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
          Length = 159

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E G  +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDGLTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|157151233|ref|YP_001449858.1| hypothetical protein SGO_0542 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|259586201|sp|A8AVP8|RIMP_STRGC RecName: Full=Ribosome maturation factor rimP
 gi|157076027|gb|ABV10710.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 162

 Score =  143 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +++VI+P I    F  V +   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 10  IVELVTAVIEPAITA-PFELVDVEYGKIGSDYVLSVFVDKPEG-ITVNDTADLTDIISPL 67

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  S   ++   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEVTSPGLERPLKTKEQVEAAVGQYIHVGLYKSLDKQKVFEGTLLQ 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    LE   +  K     +I I +  +  ARL V
Sbjct: 128 FKEDVLTLEYMDKTRKK----EIDIPYSLVSKARLAV 160


>gi|257453567|ref|ZP_05618857.1| hypothetical protein ENHAE0001_1621 [Enhydrobacter aerosaccus SK60]
 gi|257449025|gb|EEV23978.1| hypothetical protein ENHAE0001_1621 [Enhydrobacter aerosaccus SK60]
          Length = 169

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 79/163 (48%), Gaps = 14/163 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFV-----ERDDG-NMTLRDCEELSQ 74
             +++ +I+P +         I  + + +  LL+I++     +R +G  +T+ DC  ++ 
Sbjct: 7   VAELTQIIEPAVTACDVSLWGIEFVPQGRRSLLRIYIEALPEDRAEGKQVTIEDCAAVTH 66

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS----GDKQK 130
            +  +LD+ + I G Y LEVSSPG+DR          + G  ++  ++ +       ++K
Sbjct: 67  QVGGVLDLHDPIAGEYLLEVSSPGLDRAFFSAEQLHDYVGQTISLRLIHAIGQGSDKRRK 126

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           + G+++   E    ++ E      +N+  +AI  D++  A L+
Sbjct: 127 VTGELVNIDERQLTVKTEN---DQVNDQLLAIELDNIDKANLV 166


>gi|328953956|ref|YP_004371290.1| Ribosome maturation factor rimP [Desulfobacca acetoxidans DSM
           11109]
 gi|328454280|gb|AEB10109.1| Ribosome maturation factor rimP [Desulfobacca acetoxidans DSM
           11109]
          Length = 153

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            + G ++ +I PV++      V+   +   +  +L++F+++  G ++L DC  LS  +  
Sbjct: 5   DVTGRVTELILPVLQAHDVELVETEFVRAGRRYILRLFLDKP-GGISLEDCAYLSNLLGE 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++DV ++I   Y LEVSSPG+ RP+ +  DF R+ G +V   +    G +    G+++G 
Sbjct: 64  LIDVHDVIRHAYILEVSSPGLTRPIKKIEDFSRYAGRLVRITVRGGVGKRSLYRGELLGL 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 +++  R          AI    +  ARL
Sbjct: 124 DGETVKVKEGSRVY--------AIPVKDIARARL 149


>gi|307579212|gb|ADN63181.1| hypothetical protein XFLM_06240 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 176

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 85/156 (54%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDCEELSQAIS 77
           +I +++ P +E + F  +    L      +L+++++     + +  +++ DCE +S+ +S
Sbjct: 7   EIVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDCERVSREVS 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     ++L GKI+ 
Sbjct: 67  AYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSRRLQGKIVR 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             + G F+         +N +++A+ F+++  AR++
Sbjct: 127 VEQVGGFV------VLLVNGVELAVDFNNIDKARIV 156


>gi|326803577|ref|YP_004321395.1| hypothetical protein HMPREF9243_1141 [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650272|gb|AEA00455.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
          Length = 157

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++I+  I EM ++   I+  +E K+  L+I+++ +DG +T+ DC + S+ IS I
Sbjct: 4   VTDQVKALIEADINEMGYQLFDITFSKEGKDWYLRIYIDNNDG-ITIADCVKASEKISEI 62

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD   ++ I   Y LEVSSPG +RP+   +   +  G  V           + + G+++ 
Sbjct: 63  LDNVEDDPIPQAYYLEVSSPGAERPLNNDNAIQQAIGKWVHLNFYHEIDGSKFVEGRLLE 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            SE  F LE + +  + + +        S+   RL +
Sbjct: 123 ASEQYFTLEVKDKTRRLVQD----FPRKSVSLIRLAI 155


>gi|297170975|gb|ADI21990.1| uncharacterized protein conserved in bacteria [uncultured
           myxobacterium HF0200_01L06]
          Length = 170

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER--DDGNMTLRDCEELSQAIS 77
            +  ++ ++I+PV+E+     V  +++  +  +++I ++R  +   + +  C E+S+ + 
Sbjct: 4   DIPEELRTLIEPVLEDHGCELVD-TIVLNRPKVVRIIIDRASEGRGVGIDLCAEISREVG 62

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD    IEG YRLEVSSPG+ R + R+ DF    G  V          +++  G+++ 
Sbjct: 63  TQLDAAEAIEGSYRLEVSSPGLHRVLSREKDFRAACGQNVNVTTKGLIDGRRRFNGQLLE 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +             +++ +++ I FD +  A L+
Sbjct: 123 FGD--------GLARVEVDGVRVGIPFDQIEKANLV 150


>gi|262282170|ref|ZP_06059939.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
 gi|262262624|gb|EEY81321.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
          Length = 162

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +++VI+P I    F  V +   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 10  IVELVTAVIEPAITA-PFELVDVEYGKIGSDYVLSVFVDKPEG-ITVNDTADLTDIISPL 67

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  S   ++   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEVTSPGLERPLKTKEQVEAAVGQYIHVGLYKSLDKQKVFEGTLLQ 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K     +I I +  +  ARL V
Sbjct: 128 FKEDVLTIEYMDKTRKK----EIDIPYSLVSKARLAV 160


>gi|56707227|ref|YP_169123.1| hypothetical protein FTT_0048 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669697|ref|YP_666254.1| hypothetical protein FTF0048 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115315430|ref|YP_764153.1| hypothetical protein FTH_1748 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|169656764|ref|YP_001429349.2| hypothetical protein FTA_1918 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254375032|ref|ZP_04990512.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|254874066|ref|ZP_05246776.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81598096|sp|Q5NIL9|RIMP_FRATT RecName: Full=Ribosome maturation factor rimP
 gi|122324584|sp|Q0BK68|RIMP_FRATO RecName: Full=Ribosome maturation factor rimP
 gi|123169692|sp|Q14K22|RIMP_FRAT1 RecName: Full=Ribosome maturation factor rimP
 gi|189030342|sp|A7NEJ0|RIMP_FRATF RecName: Full=Ribosome maturation factor rimP
 gi|56603719|emb|CAG44681.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320030|emb|CAL08064.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115130329|gb|ABI83516.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|151572750|gb|EDN38404.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|164551832|gb|ABU62393.2| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254840065|gb|EET18501.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 152

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 8/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ IS + 
Sbjct: 4   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEISAVF 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ + G Y LEVSSPG++R +          G  V    +   G + K  G +     
Sbjct: 63  DVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L  E   E       I+  FD L   R+
Sbjct: 123 NNVILNLEDGKE-------ISFDFDELKKLRV 147


>gi|227890228|ref|ZP_04008033.1| protein of hypothetical function DUF150 [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849230|gb|EEJ59316.1| protein of hypothetical function DUF150 [Lactobacillus johnsonii
           ATCC 33200]
          Length = 172

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 16  TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 75

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 76  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKAFEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++    LE + +  +      I I    + S+R  V
Sbjct: 136 KDLNQDQIVLEVKIKTRRKY----ITIPRKVIASSRFAV 170


>gi|309799812|ref|ZP_07694019.1| conserved hypothetical protein [Streptococcus infantis SK1302]
 gi|308116528|gb|EFO53997.1| conserved hypothetical protein [Streptococcus infantis SK1302]
          Length = 159

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKEAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|25010486|ref|NP_734881.1| hypothetical protein gbs0413 [Streptococcus agalactiae NEM316]
 gi|50403657|sp|P62599|RIMP_STRA5 RecName: Full=Ribosome maturation factor rimP
 gi|50403658|sp|P62600|RIMP_STRA3 RecName: Full=Ribosome maturation factor rimP
 gi|23094839|emb|CAD46057.1| unknown [Streptococcus agalactiae NEM316]
          Length = 159

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 9/163 (5%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +  +  +   ++ V+ P I+   F  V +   +   + +L I +++  G +T+ D  +L+
Sbjct: 1   MIANQTIVDIVTQVVTPAIQA-PFELVDVEYEKMGGDYVLSILIDKP-GGITVEDTAQLT 58

Query: 74  QAISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
             +SP+LD    +     Y LEVSSPG++RP+          G  +   +  S    +  
Sbjct: 59  DVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIF 118

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G ++        ++   +         + I + ++  ARL V
Sbjct: 119 EGDLLSFDGETLTIDYMDKTRHK----TVDIPYQTVAKARLAV 157


>gi|291543556|emb|CBL16665.1| Uncharacterized protein conserved in bacteria [Ruminococcus sp.
           18P13]
          Length = 158

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
           ++  +      + ++  P+ E +      +   +E  +  L++F+++D+G +++ DCE +
Sbjct: 2   KLKKNGATEQKVYALAAPLAESLGLVIWDVRFEKEGASWYLRVFIDKDEG-ISIDDCEAM 60

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKL 131
           S+ +S +LD  + I+  Y LEV S G++R +VR+S F    G VV   ++      +++ 
Sbjct: 61  SRPLSDLLDEADPIDQQYFLEVGSAGLERDLVRESHFAASIGAVVRMRLIRPDETGQKEY 120

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           +G +    +    L  E        +  +   F ++ 
Sbjct: 121 VGALESFDKEQVRLVLED-------DTTVTAPFANIA 150


>gi|89257074|ref|YP_514436.1| hypothetical protein FTL_1811 [Francisella tularensis subsp.
           holarctica LVS]
 gi|118498224|ref|YP_899274.1| hypothetical protein FTN_1662 [Francisella tularensis subsp.
           novicida U112]
 gi|134301262|ref|YP_001121230.1| hypothetical protein FTW_0124 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|167009461|ref|ZP_02274392.1| hypothetical protein Ftulh_01737 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|194324408|ref|ZP_03058181.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208780251|ref|ZP_03247593.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|224456288|ref|ZP_03664761.1| hypothetical protein FtultM_00215 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|290954350|ref|ZP_06558971.1| hypothetical protein FtulhU_09047 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312214|ref|ZP_06803014.1| hypothetical protein FtulhU_09034 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122500220|sp|Q2A1G6|RIMP_FRATH RecName: Full=Ribosome maturation factor rimP
 gi|226696298|sp|A4IW08|RIMP_FRATW RecName: Full=Ribosome maturation factor rimP
 gi|226736401|sp|A0Q8F5|RIMP_FRATN RecName: Full=Ribosome maturation factor rimP
 gi|89144905|emb|CAJ80250.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|118424130|gb|ABK90520.1| conserved protein of unknown function [Francisella novicida U112]
 gi|134049039|gb|ABO46110.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|194321473|gb|EDX18958.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208743900|gb|EDZ90202.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|282158335|gb|ADA77726.1| hypothetical protein NE061598_00270 [Francisella tularensis subsp.
           tularensis NE061598]
 gi|332678960|gb|AEE88089.1| clustered with transcription termination protein NusA [Francisella
           cf. novicida Fx1]
          Length = 150

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 8/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ IS + 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEISAVF 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ + G Y LEVSSPG++R +          G  V    +   G + K  G +     
Sbjct: 61  DVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L  E   E       I+  FD L   R+
Sbjct: 121 NNVILNLEDGKE-------ISFDFDELKKLRV 145


>gi|62263138|gb|AAX78134.1| unknown protein [synthetic construct]
          Length = 187

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 8/164 (4%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
              +  +     L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ D
Sbjct: 18  DDDDKHMLEVKMLLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDD 76

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           C+ +S+ IS + DVE+ + G Y LEVSSPG++R +          G  V    +   G +
Sbjct: 77  CQIVSKEISAVFDVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQ 136

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            K  G +         L  E   E       I+  FD L   R+
Sbjct: 137 TKFKGVLERVEGNNVILNLEDGKE-------ISFDFDELKKLRV 173


>gi|293610133|ref|ZP_06692434.1| hypothetical protein HMPREF0013_02285 [Acinetobacter sp. SH024]
 gi|292827365|gb|EFF85729.1| hypothetical protein HMPREF0013_02285 [Acinetobacter sp. SH024]
 gi|325124306|gb|ADY83829.1| hypothetical protein BDGL_003243 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 174

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVER-----------DDG----- 62
             +  +  +I P +E        I  L + K  LL+I++++           +DG     
Sbjct: 5   NKSQALHDLIVPAVEACGVDLWGIEFLPQGKRSLLRIYIDKAVSEDAEPVINEDGEVELG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  +A  +
Sbjct: 65  RGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQGYIGQQIALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        ++ E  G+       + I  +++  A LI  D
Sbjct: 125 IAAVENRRKFQAKLIAVDLENEEIQVEVDGKH-----VLVIDSNNIDKANLIYQD 174


>gi|237739229|ref|ZP_04569710.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|229422837|gb|EEO37884.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
          Length = 156

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 11/156 (7%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P +EEM+   V +  L++     +++F+E  +G++++ DC +LS  I
Sbjct: 4   NSQIIEKITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRVFIENLNGDLSIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++R + +  D++R+ G  +   +     DK++    I 
Sbjct: 64  EDK--VEELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKLNDKKQFKAVIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                      +K+        ++ I F  +  A +
Sbjct: 122 EVKGDNIVFLIDKK--------EVEIEFKEIRKANI 149


>gi|189485236|ref|YP_001956177.1| hypothetical protein TGRD_233 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|259645130|sp|B1GZN4|RIMP_UNCTG RecName: Full=Ribosome maturation factor rimP
 gi|170287195|dbj|BAG13716.1| conserved hypothetical protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 151

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 9/155 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M    +I  ++ PV        V +    +  + + +IF+++D G +T+ DCE +S    
Sbjct: 1   MRKVQEIEDLLAPVAAREKIEIVDVQYSKKAGDWVARIFIDKDSG-VTISDCENISCIFG 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  +I++  Y LE+SSPG  R +  +  F R+ G            +++  +G ++ 
Sbjct: 60  AFLDESDILKDSYVLEISSPGFKRVLKSEKSFRRFIGSKTRIRTFKPINNQRNFLGTLLN 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +    +        D+    + I F  +  A +
Sbjct: 120 FDDGRIKIN-------DVTNGVVEIEFSDIRKANI 147


>gi|241889857|ref|ZP_04777155.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
 gi|241863479|gb|EER67863.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
          Length = 154

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + ++     E   F    +  ++E     L+I+ ++ DG +TL DC  LS+ ++
Sbjct: 1   MSIVEKVKAIATKQAENTEFSLYDVEYVKEGTEYFLRIYFDK-DGGLTLDDCVLLSEKLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I   Y LEVSSPGI+R +    +     G  V  +      ++++  G I+ 
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERDLRDLEEVTNSVGKHVYIKTYEKIDNQKEFYGDILA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + +     +     I++  +   RL V
Sbjct: 120 VEGEEITVEYKDKARVKKS----TINYSKIAKIRLAV 152


>gi|116629467|ref|YP_814639.1| hypothetical protein LGAS_0810 [Lactobacillus gasseri ATCC 33323]
 gi|116095049|gb|ABJ60201.1| hypothetical protein LGAS_0810 [Lactobacillus gasseri ATCC 33323]
          Length = 172

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 16  TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 75

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 76  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++    LE + +  +     +I I    + S+R  V
Sbjct: 136 KDLNQNQIVLEVKIKTRRK----EITIPRKVIASSRFAV 170


>gi|71908072|ref|YP_285659.1| hypothetical protein Daro_2454 [Dechloromonas aromatica RCB]
 gi|91208406|sp|Q47D92|RIMP_DECAR RecName: Full=Ribosome maturation factor rimP
 gi|71847693|gb|AAZ47189.1| Protein of unknown function DUF150 [Dechloromonas aromatica RCB]
          Length = 146

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 79/152 (51%), Gaps = 13/152 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD--DGNMTLRDCEELSQAISPILD 81
           D++++++  +  + +  V + +   +   +++F++    +  + + DC ++S  ++ + +
Sbjct: 2   DLNTLLETTVVGLGYELVDVEMSP-RGRTIRVFIDAPAKETGIDVEDCAKVSNQLTRVFE 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VEN      RLE+SSPG+DR + + +DF R++G  +  ++ +  G ++   G+++G  + 
Sbjct: 61  VENF--DFDRLEISSPGLDRVVKKAADFERFSGQEIQIKVRIPQGGRRNFQGELLGLKDG 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              L   K          + + F ++  ARL+
Sbjct: 119 KVGLRLAKD--------DVELEFTNIEKARLV 142


>gi|325685947|gb|EGD28010.1| hypothetical protein HMPREF5505_0324 [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 176

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           I   I+PVI       V +  ++EK    L+I+V++    + +    ELS+ +   LD  
Sbjct: 26  ILEAIEPVIIGHDCELVDLEYVKEKSQYYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 85

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +   +      ++   G ++   + 
Sbjct: 86  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYIHVGLYQKLEGEKVFEGHLLDLDDQ 145

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE + +  +     Q+ I    + SAR  +
Sbjct: 146 EIKLEIKIKTRRK----QLTIPRKQIASARFAI 174


>gi|262280757|ref|ZP_06058540.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257657|gb|EEY76392.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 174

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVER-----------DDG----- 62
             +  +  +I P ++        I  L + K  LL+I++++           +DG     
Sbjct: 5   NKSQALHDLIVPAVQACGVDLWGIEFLPQGKRSLLRIYIDKAVSEDAEPVLDEDGEVEQG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  +A  +
Sbjct: 65  RGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQGYIGQQIALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        LE E+   +   +  + I  +++  A LI  D
Sbjct: 125 IAAVENRRKFQAKLIAVD-----LENEEIQVEVDGQHVLEIDSNNIDKANLIYQD 174


>gi|282898606|ref|ZP_06306594.1| protein of unknown function DUF150 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196474|gb|EFA71383.1| protein of unknown function DUF150 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 164

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+  E+    V +     ++  +L++ +     + +L DCE++S+A+   
Sbjct: 16  LVPQIIDLATPLAAELGLEVVGMVFHTNQRPPILRVDIRNPQQDTSLNDCEKMSRALETS 75

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R +    +F+ + G  V          +++  G+++   
Sbjct: 76  LDAAEIILDTYVLEVSSPGISRELATDREFISFKGFPVVVSTCDPDDGEKEWKGQLIRRD 135

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           ET  +L ++ R    +  L   +  D 
Sbjct: 136 ETKIYLNQKGRVVGILRSLVTKVQLDD 162


>gi|17231320|ref|NP_487868.1| hypothetical protein alr3828 [Nostoc sp. PCC 7120]
 gi|34222944|sp|Q8YQJ5|RIMP_ANASP RecName: Full=Ribosome maturation factor rimP
 gi|17132962|dbj|BAB75527.1| alr3828 [Nostoc sp. PCC 7120]
          Length = 153

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I+ +  PV E++    V I     ++  +L+I +     +  L DCE +S+A+   
Sbjct: 5   LVPPITDLAIPVAEQLGLEVVGIVFHTNQRPPVLRIDIRNPQQDTGLDDCERMSRALEAA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R +V   +F+ + G  V         ++Q+ IG+++   
Sbjct: 65  LDATEIIPDAYVLEVSSPGISRQLVTDREFISFKGFPVIVSTSPPHEEQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
           ET  ++ ++ R         I I    +  
Sbjct: 125 ETKVYINQKGRV--------IEIPRPLITR 146


>gi|329767073|ref|ZP_08258601.1| hypothetical protein HMPREF0428_00298 [Gemella haemolysans M341]
 gi|328837798|gb|EGF87423.1| hypothetical protein HMPREF0428_00298 [Gemella haemolysans M341]
          Length = 154

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + ++     E   F    +  ++E     L+I+ ++ DG ++L DC  LS+ ++
Sbjct: 1   MSIVEKVKTIATKQTENTEFSLYDVEYVKEGTEYFLRIYFDK-DGGLSLDDCVLLSEKLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I   Y LEVSSPGI+R +    +     G  V  +      ++++  G I+ 
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERDLRNLEEVTNSVGKHVYIKTYEKIDNQKEFYGDILA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + +     +     I++  +   RL V
Sbjct: 120 VEGEEITVEYKDKARVKKS----TINYSKIAKIRLAV 152


>gi|269123543|ref|YP_003306120.1| hypothetical protein Smon_0773 [Streptobacillus moniliformis DSM
           12112]
 gi|268314869|gb|ACZ01243.1| protein of unknown function DUF150 [Streptobacillus moniliformis
           DSM 12112]
          Length = 164

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 12/165 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            I   IQP + E S     I  + E     L+I+VE  +GN +L DC  LS  I  I+D 
Sbjct: 7   KIEKEIQPYLNENSLELADIEYVREGGYNFLRIYVESKNGNTSLDDCVMLSTKIDNIVDE 66

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
             +I+  + LEVS+PG++R + ++ DF+R+ G  ++ +   +  +K+   G ++G     
Sbjct: 67  --LIDDKFYLEVSTPGLERKLKKEKDFIRFTGKKISVKTKSNVENKKSFEGILLGFENGK 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI--VTDELLRASLNN 185
             +       KD     + I  + +  A+L+  ++D++ +  + N
Sbjct: 125 ILI-------KDDIIENVEIPLEKIKVAKLVFNLSDKIFKEDVEN 162


>gi|329769655|ref|ZP_08261059.1| hypothetical protein HMPREF0433_00823 [Gemella sanguinis M325]
 gi|328838410|gb|EGF88019.1| hypothetical protein HMPREF0433_00823 [Gemella sanguinis M325]
          Length = 154

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 73/157 (46%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + S+    +++ ++    +  ++E  +  L+++ ++ DG ++L DC  LS+ ++
Sbjct: 1   MSIVQKVKSIATEQVKDSNYSLYDVEYVKEGSDYFLRVYFDK-DGGLSLDDCVLLSERLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I   Y LEVSSPGI+R +    +     G  V  +      ++++  G I+ 
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERDLRDLEEVSNSVGKHVYIKTYEKIDNQKEFYGDIIS 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + +     +     + ++ +   RL V
Sbjct: 120 VDGDEITIEYKDKARVKKS----VVKYEKIAKIRLAV 152


>gi|148983930|ref|ZP_01817249.1| hypothetical protein CGSSp3BS71_07349 [Streptococcus pneumoniae
           SP3-BS71]
 gi|148990070|ref|ZP_01821324.1| hypothetical protein CGSSp6BS73_05420 [Streptococcus pneumoniae
           SP6-BS73]
 gi|148992338|ref|ZP_01822061.1| hypothetical protein CGSSp9BS68_06575 [Streptococcus pneumoniae
           SP9-BS68]
 gi|148998225|ref|ZP_01825694.1| hypothetical protein CGSSp11BS70_03456 [Streptococcus pneumoniae
           SP11-BS70]
 gi|168485663|ref|ZP_02710171.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|168490558|ref|ZP_02714701.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|168576546|ref|ZP_02722420.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|225854093|ref|YP_002735605.1| hypothetical protein SPJ_0512 [Streptococcus pneumoniae JJA]
 gi|225856262|ref|YP_002737773.1| hypothetical protein SPP_0569 [Streptococcus pneumoniae P1031]
 gi|225860557|ref|YP_002742066.1| hypothetical protein SPT_0582 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|237650176|ref|ZP_04524428.1| hypothetical protein SpneC1_05532 [Streptococcus pneumoniae CCRI
           1974]
 gi|237821776|ref|ZP_04597621.1| hypothetical protein SpneC19_05602 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|298230908|ref|ZP_06964589.1| hypothetical protein SpneCMD_09588 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255626|ref|ZP_06979212.1| hypothetical protein SpneCM_08527 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298502346|ref|YP_003724286.1| hypothetical protein HMPREF0837_10844 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|303255253|ref|ZP_07341326.1| hypothetical protein CGSSpBS455_07226 [Streptococcus pneumoniae
           BS455]
 gi|307709806|ref|ZP_07646257.1| conserved hypothetical protein [Streptococcus mitis SK564]
 gi|254806452|sp|C1CCT4|RIMP_STRZJ RecName: Full=Ribosome maturation factor rimP
 gi|254806512|sp|C1CJ35|RIMP_STRZP RecName: Full=Ribosome maturation factor rimP
 gi|254806519|sp|C1CQ44|RIMP_STRZT RecName: Full=Ribosome maturation factor rimP
 gi|259586203|sp|C1C5S4|RIMP_STRP7 RecName: Full=Ribosome maturation factor rimP
 gi|259586204|sp|B2IME0|RIMP_STRPS RecName: Full=Ribosome maturation factor rimP
 gi|147755868|gb|EDK62912.1| hypothetical protein CGSSp11BS70_03456 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147924077|gb|EDK75189.1| hypothetical protein CGSSp3BS71_07349 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147924596|gb|EDK75683.1| hypothetical protein CGSSp6BS73_05420 [Streptococcus pneumoniae
           SP6-BS73]
 gi|147928964|gb|EDK79976.1| hypothetical protein CGSSp9BS68_06575 [Streptococcus pneumoniae
           SP9-BS68]
 gi|183571099|gb|EDT91627.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|183574915|gb|EDT95443.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|183577690|gb|EDT98218.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|225722728|gb|ACO18581.1| conserved hypothetical protein [Streptococcus pneumoniae JJA]
 gi|225725938|gb|ACO21790.1| conserved hypothetical protein [Streptococcus pneumoniae P1031]
 gi|225727228|gb|ACO23079.1| conserved hypothetical protein [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237941|gb|ADI69072.1| protein of hypothetical function DUF150 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301799609|emb|CBW32164.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
 gi|301801433|emb|CBW34120.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
 gi|302597794|gb|EFL64867.1| hypothetical protein CGSSpBS455_07226 [Streptococcus pneumoniae
           BS455]
 gi|307619508|gb|EFN98633.1| conserved hypothetical protein [Streptococcus mitis SK564]
 gi|327390292|gb|EGE88633.1| hypothetical protein SPAR5_0534 [Streptococcus pneumoniae GA04375]
 gi|332076388|gb|EGI86851.1| hypothetical protein SPAR68_0575 [Streptococcus pneumoniae GA41301]
 gi|332202436|gb|EGJ16505.1| hypothetical protein SPAR69_0547 [Streptococcus pneumoniae GA41317]
 gi|332203717|gb|EGJ17784.1| hypothetical protein SPAR93_0588 [Streptococcus pneumoniae GA47368]
          Length = 159

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPV 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|294783787|ref|ZP_06749111.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480665|gb|EFG28442.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
          Length = 156

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 11/156 (7%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P +EEM+   V +  L++     ++IF+E  +G +++ DC +LS  I
Sbjct: 4   NSQIIEKITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRIFIENLNGELSIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++R + +  D++R+ G  +   +     DK++    I 
Sbjct: 64  EDK--VEELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKLNDKKQFKAVIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                      +K+        ++ I F  +  A +
Sbjct: 122 EVKGDNIVFLIDKK--------EVEIEFKEIRKANI 149


>gi|187931004|ref|YP_001890988.1| protein Lpl2691 [Francisella tularensis subsp. mediasiatica FSC147]
 gi|226696222|sp|B2SEW5|RIMP_FRATM RecName: Full=Ribosome maturation factor rimP
 gi|187711913|gb|ACD30210.1| protein Lpl2691 [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 150

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 8/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ IS + 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEISAVF 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ + G Y LEVSSPG++R +          G  V    +   G + K  G +     
Sbjct: 61  DVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L  E   E       I+  FD L   R+
Sbjct: 121 NSVILNLEDGKE-------ISFDFDELKKLRV 145


>gi|55820433|ref|YP_138875.1| hypothetical protein stu0340 [Streptococcus thermophilus LMG 18311]
 gi|55822317|ref|YP_140758.1| hypothetical protein str0340 [Streptococcus thermophilus CNRZ1066]
 gi|81559802|sp|Q5M1C3|RIMP_STRT1 RecName: Full=Ribosome maturation factor rimP
 gi|81560972|sp|Q5M5V9|RIMP_STRT2 RecName: Full=Ribosome maturation factor rimP
 gi|55736418|gb|AAV60060.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55738302|gb|AAV61943.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 163

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 71/166 (42%), Gaps = 11/166 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEM---SFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCE 70
           +  ++ ++  I  ++  V+       +  V I   +   + +L + +++  G +T+ D  
Sbjct: 1   MCKEVIMSQKIIDLVTAVVAPAIPDPYELVDIEYEKIGSDYILSVLIDKP-GGITVEDTA 59

Query: 71  ELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           +L++ ISP+LD    +     Y LEVSSPG++RP+  K       G  +   +  +    
Sbjct: 60  DLTEIISPLLDTIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSLYKAIDKI 119

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   G ++        ++   +         + I + ++  ARL V
Sbjct: 120 KIFQGDLLAFDGETLTIDYLDKTRHK----TVEIPYQTVAKARLAV 161


>gi|228476573|ref|ZP_04061255.1| conserved hypothetical protein [Streptococcus salivarius SK126]
 gi|228251768|gb|EEK10833.1| conserved hypothetical protein [Streptococcus salivarius SK126]
          Length = 157

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +++V+ P I E  +  V I   +   + +L + +++  G +T+ D  +L++ ISP+
Sbjct: 5   IIDLVTAVVAPAIPE-PYELVDIEYEKLGGDYVLSVLIDKP-GGITVEDTADLTEIISPL 62

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEVSSPG++RP+  K       G  +   +  +    +   G ++ 
Sbjct: 63  LDTIQPDPFPDQYMLEVSSPGLERPLKTKEALTNAVGQYINVSLYKAIDKIKIFQGDLVA 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  ++   +         + I + ++  ARL V
Sbjct: 123 FDGETLTIDYLDKTRHK----TVEIPYQTVAKARLAV 155


>gi|324991724|gb|EGC23656.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK353]
          Length = 177

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K     ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDKTRKK----EVEIPYSLVSKARLAV 175


>gi|262066536|ref|ZP_06026148.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291379770|gb|EFE87288.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 156

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 11/156 (7%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P +EEM+   V +  L++     +++F+E  +G +++ DC +LS  I
Sbjct: 4   NSQIIEKITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRVFIENLNGELSIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++R + +  D++R+ G  +   +     DK++    I 
Sbjct: 64  EDR--VEELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKMNDKKQFKAVIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                      +K+        ++ I F  +  A +
Sbjct: 122 EVKGDNIVFLIDKK--------EVEIEFKEIRKANI 149


>gi|15900464|ref|NP_345068.1| hypothetical protein SP_0552 [Streptococcus pneumoniae TIGR4]
 gi|111657274|ref|ZP_01408040.1| hypothetical protein SpneT_02001512 [Streptococcus pneumoniae
           TIGR4]
 gi|149012574|ref|ZP_01833571.1| hypothetical protein CGSSp19BS75_10108 [Streptococcus pneumoniae
           SP19-BS75]
 gi|168488243|ref|ZP_02712442.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|194396782|ref|YP_002037213.1| hypothetical protein SPG_0498 [Streptococcus pneumoniae G54]
 gi|221231385|ref|YP_002510537.1| hypothetical protein SPN23F_04980 [Streptococcus pneumoniae ATCC
           700669]
 gi|307710805|ref|ZP_07647233.1| conserved hypothetical protein [Streptococcus mitis SK321]
 gi|34222993|sp|Q97S61|RIMP_STRPN RecName: Full=Ribosome maturation factor rimP; AltName: Full=SP14.3
 gi|226707643|sp|B5E262|RIMP_STRP4 RecName: Full=Ribosome maturation factor rimP
 gi|254806440|sp|B8ZM89|RIMP_STRPJ RecName: Full=Ribosome maturation factor rimP
 gi|14972026|gb|AAK74708.1| SP14.3 protein [Streptococcus pneumoniae TIGR4]
 gi|147763379|gb|EDK70316.1| hypothetical protein CGSSp19BS75_10108 [Streptococcus pneumoniae
           SP19-BS75]
 gi|183572963|gb|EDT93491.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|194356449|gb|ACF54897.1| hypothetical protein SPG_0498 [Streptococcus pneumoniae G54]
 gi|220673845|emb|CAR68348.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
           700669]
 gi|301793756|emb|CBW36143.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
 gi|307617411|gb|EFN96583.1| conserved hypothetical protein [Streptococcus mitis SK321]
 gi|332074366|gb|EGI84842.1| hypothetical protein SPAR50_0547 [Streptococcus pneumoniae GA17570]
 gi|332204572|gb|EGJ18637.1| hypothetical protein SPAR120_0537 [Streptococcus pneumoniae
           GA47901]
          Length = 159

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|171778094|ref|ZP_02919351.1| hypothetical protein STRINF_00186 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283076|gb|EDT48500.1| hypothetical protein STRINF_00186 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 146

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 9/150 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--N 84
           ++ P I+E  F  V +   +   + +L I +++  G +T+ D  +L++ ISP+LD    +
Sbjct: 1   MVAPAIKE-PFELVDVEYGKMGSDYVLSILIDKP-GGITVNDTADLTEIISPLLDAIKPD 58

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEVSSPG++RP+  K    +  G  V   +  +    +   G ++        
Sbjct: 59  PFPEQYMLEVSSPGLERPLKTKEALEKALGSYVNVSLYKAIDKVKVFQGDLVAFDGETLT 118

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++   +  K      + I + ++  ARL V
Sbjct: 119 IDYLDKTRKK----TVEIPYSTVAKARLAV 144


>gi|229829177|ref|ZP_04455246.1| hypothetical protein GCWU000342_01262 [Shuttleworthia satelles DSM
           14600]
 gi|229792340|gb|EEP28454.1| hypothetical protein GCWU000342_01262 [Shuttleworthia satelles DSM
           14600]
          Length = 157

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 78/148 (52%), Gaps = 3/148 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                + + P++E+  F  V +  ++E     L+ ++++  G +T+ DC ++S+ ++ IL
Sbjct: 8   EEKTEAFLLPILEKDGFSLVDVEYVKEGGQYYLRAYIDKP-GGITIDDCVDVSREMNEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+G Y  EVSSPG+ RP+ ++ DF R     V  +   +   +++ +G +   S+
Sbjct: 67  DREDYIDGTYTFEVSSPGLGRPIRKERDFARNLDKEVEIKSYRAIDGEKEFLGLLRDYSK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLL 168
               +E E+   K   E  IA+  +++ 
Sbjct: 127 ADVTIESEEGIRKICRE-DIALIREAID 153


>gi|310658998|ref|YP_003936719.1| hypothetical protein CLOST_1694 [Clostridium sticklandii DSM 519]
 gi|308825776|emb|CBH21814.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 152

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 5/146 (3%)

Query: 21  LAGDISSVIQPVIEEM---SFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +A  +  +I+ ++ +M    F  V +  ++E +   L+I++++  G M+L DC+  S  I
Sbjct: 1   MASKLELLIEGIVSDMITDPFELVDVEYVKEGSLKYLRIYIDK-QGKMSLDDCQHFSHLI 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IE +Y LE+SSPG+DR + ++ DF+R  G  V  ++  +    ++  G ++
Sbjct: 60  SEKLDELDPIEENYMLEISSPGLDRHLKKEKDFIREKGKEVELKLFKAIDGVKEFEGTLV 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAI 162
           G SE      +  +G     +  +A+
Sbjct: 120 GLSEDNEIEVQTSKGLMKFPKKNVAV 145


>gi|159162465|pdb|1IB8|A Chain A, Solution Structure And Function Of A Conserved Protein
           Sp14.3 Encoded By An Essential Streptococcus Pneumoniae
           Gene
          Length = 164

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 10  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPV 67

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 128 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 160


>gi|322373935|ref|ZP_08048470.1| SP14.3 protein [Streptococcus sp. C150]
 gi|321277307|gb|EFX54377.1| SP14.3 protein [Streptococcus sp. C150]
          Length = 157

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +++V+ P I E  +  V I   +   + +L + +++  G +T+ D  +L++ ISP+
Sbjct: 5   IVDLVTAVVAPAIPE-PYELVDIEYEKLGSDYVLSVLIDKP-GGITVEDTADLTEIISPL 62

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEVSSPG++RP+  K       G  +   +  +    +   G ++ 
Sbjct: 63  LDTIQPDPFPDQYMLEVSSPGLERPLKTKEALTNAVGQYINVSLYKAIDKIKIFQGDLVA 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  ++   +         + I + ++  ARL V
Sbjct: 123 FDGETLTIDYLDKTRHK----TVEIPYQTVAKARLAV 155


>gi|116627257|ref|YP_819876.1| hypothetical protein STER_0379 [Streptococcus thermophilus LMD-9]
 gi|122268140|sp|Q03M92|RIMP_STRTD RecName: Full=Ribosome maturation factor rimP
 gi|116100534|gb|ABJ65680.1| Uncharacterized protein conserved in bacteria [Streptococcus
           thermophilus LMD-9]
 gi|312277741|gb|ADQ62398.1| Ribosome maturation factor rimP [Streptococcus thermophilus ND03]
          Length = 157

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +++V+ P I +  +  V I   +   + +L + +++  G +T+ D  +L++ ISP+
Sbjct: 5   IIDLVTAVVAPAIPD-PYELVDIEYEKIGSDYILSVLIDKP-GGITVEDTADLTEIISPL 62

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEVSSPG++RP+  K       G  +   +  +    +   G ++ 
Sbjct: 63  LDTIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSLYKAIDKIKIFQGDLLA 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  ++   +         + I + ++  ARL V
Sbjct: 123 FDGETLTIDYLDKTRHK----TVEIPYQTVAKARLAV 155


>gi|168482792|ref|ZP_02707744.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|303260041|ref|ZP_07346014.1| hypothetical protein CGSSp9vBS293_01125 [Streptococcus pneumoniae
           SP-BS293]
 gi|303261225|ref|ZP_07347173.1| hypothetical protein CGSSp14BS292_07790 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303263890|ref|ZP_07349811.1| hypothetical protein CGSSpBS397_04757 [Streptococcus pneumoniae
           BS397]
 gi|303267074|ref|ZP_07352945.1| hypothetical protein CGSSpBS457_10002 [Streptococcus pneumoniae
           BS457]
 gi|303269289|ref|ZP_07355063.1| hypothetical protein CGSSpBS458_08806 [Streptococcus pneumoniae
           BS458]
 gi|172043720|gb|EDT51766.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|302637359|gb|EFL67846.1| hypothetical protein CGSSp14BS292_07790 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638736|gb|EFL69198.1| hypothetical protein CGSSpBS293_01125 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641186|gb|EFL71559.1| hypothetical protein CGSSpBS458_08806 [Streptococcus pneumoniae
           BS458]
 gi|302643402|gb|EFL73678.1| hypothetical protein CGSSpBS457_10002 [Streptococcus pneumoniae
           BS457]
 gi|302646295|gb|EFL76521.1| hypothetical protein CGSSpBS397_04757 [Streptococcus pneumoniae
           BS397]
          Length = 175

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPV 80

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 141 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 173


>gi|297180948|gb|ADI17151.1| uncharacterized protein conserved in bacteria [uncultured gamma
           proteobacterium HF0070_08D07]
          Length = 152

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 11/153 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE--KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
            +I S++ P IE +  R   + L      NL + ++++ +DG +++ DC  +S+ +S IL
Sbjct: 6   ENIESLVAPTIEALGCRIWGVELQGGLKNNLKVVVYIDSEDG-ISVDDCATVSEHVSDIL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D+E ++   Y LEVSSPG+DR + ++  F    G  +   +      ++KL G ++   +
Sbjct: 65  DMEELVPSPYVLEVSSPGLDRILFKEQHFKESLGLKIDVRLNRPFEGRKKLTGVLLDYGD 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               L  +             I  D++   RL+
Sbjct: 125 LELILRDKMGVRN--------IPVDAIRKVRLV 149


>gi|304439998|ref|ZP_07399891.1| protein of hypothetical function DUF150 [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371490|gb|EFM25103.1| protein of hypothetical function DUF150 [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 154

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 10/151 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G+   ++ +   V EE  +  V+++  +   + L+ +F+ ++DG ++L DC+ +S+AI  
Sbjct: 6   GILSKLNEISTKVAEERGYEIVEVAYKKATPHSLVSVFIYKEDG-ISLDDCDTMSRAIEE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E+IIE  Y LEVSSPG+DRP+  + D  R  G +V  ++       +   G +   
Sbjct: 65  ELDKEDIIEESYYLEVSSPGLDRPIKTQDDLRRNKGKLVEAKLFAPLDGNKLYEGVLASY 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
           ++    L+ E +        ++ +   S+  
Sbjct: 125 TKDTVILDNEGK--------EVELPLKSISK 147


>gi|299771784|ref|YP_003733810.1| hypothetical protein AOLE_17760 [Acinetobacter sp. DR1]
 gi|298701872|gb|ADI92437.1| hypothetical protein AOLE_17760 [Acinetobacter sp. DR1]
          Length = 175

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 24/176 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVER------------DDG---- 62
             +  +  +I P ++        I  L + K  LL+I++++            +DG    
Sbjct: 5   NKSQALHDLIVPAVQACGVDLWGIEFLPQGKRSLLRIYIDKAVSEEDAEPVLNEDGEVEL 64

Query: 63  --NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
              + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  +A  
Sbjct: 65  GRGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQGYIGQQIALR 124

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           ++ +  +++K   K++        ++ E  G+       + I  +++  A LI  D
Sbjct: 125 LIAAVENRRKFQAKLIAVDLENEEIQVEVDGKH-----VLEIDSNNIDKANLIYQD 175


>gi|299144045|ref|ZP_07037125.1| 15 kDa protein [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518530|gb|EFI42269.1| 15 kDa protein [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 153

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 10/154 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L   I ++ +    E+ +  V +   +  K+ LL IF+ + +G + + DC  +S+
Sbjct: 1   MKKNDLIDKIKNIAEECSNEIGYEIVDVEYQVGNKHDLLSIFIYKKEG-IDINDCTNMSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I  ILD E+II+  Y LE+SSPG+DRP+  K D+ R  G+ V  ++      K+ + G 
Sbjct: 60  IIESILDKEDIIDKPYYLEISSPGLDRPLKTKDDYRRNVGNEVTVKLYAPLDGKKLIEGI 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           +    E+   L  E           I I   S+ 
Sbjct: 120 LENYDESIIILSVEDEK--------IEIPIKSIS 145


>gi|224373557|ref|YP_002607929.1| hypothetical protein NAMH_1540 [Nautilia profundicola AmH]
 gi|259585797|sp|B9L6E1|RIMP_NAUPA RecName: Full=Ribosome maturation factor rimP
 gi|223588517|gb|ACM92253.1| conserved hypothetical protein [Nautilia profundicola AmH]
          Length = 148

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 18/153 (11%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +++ +I+ ++E+       I L EE      ++++ +  G ++L DC +++  ISPI D
Sbjct: 4   SELNDIIKNIVEDNGCDLYDIELSEEGGHKYFRVYITKP-GGVSLNDCAKINNLISPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +E+ +EG Y LEVSSPG++R + +   F +  G  V         D  KL G++    + 
Sbjct: 63  IEDPVEGKYFLEVSSPGLERKLTKPEHFEKSIGEKVKVTT----NDGTKLKGELKSFIDN 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              + KEK            ++FD +  A+  +
Sbjct: 119 VAEIGKEK------------VNFDDIKKAKTYI 139


>gi|307707651|ref|ZP_07644132.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|322377699|ref|ZP_08052189.1| SP14.3 protein [Streptococcus sp. M334]
 gi|307616364|gb|EFN95556.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|321281464|gb|EFX58474.1| SP14.3 protein [Streptococcus sp. M334]
          Length = 159

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|224367579|ref|YP_002601742.1| hypothetical protein HRM2_04640 [Desulfobacterium autotrophicum
           HRM2]
 gi|259585763|sp|C0QHM0|RIMP_DESAH RecName: Full=Ribosome maturation factor rimP
 gi|223690295|gb|ACN13578.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 155

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I S+ +P+     F  V +  +  +  ++++I++++  G +TL DC  +++ +  I
Sbjct: 11  IVTAIESIAEPLCIAEGFELVHVECVSDQGGMIVRIYLDKP-GGITLDDCVHMTRHLGDI 69

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE      YRLE+SSPG  RP+ + +DF R+ G  V  E V   G + K  G +    
Sbjct: 70  IDVELEEISAYRLEISSPGAKRPLKKLADFERFLGSRVKVEAVEPIGGRLKFTGILSKVQ 129

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +           E  +N   +   F+ +  +RL 
Sbjct: 130 D--------GCVEVVVNNEPVVFHFEQISKSRLA 155


>gi|307702468|ref|ZP_07639423.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|307623962|gb|EFO02944.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
          Length = 159

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|307705616|ref|ZP_07642468.1| conserved hypothetical protein [Streptococcus mitis SK597]
 gi|307620893|gb|EFN99977.1| conserved hypothetical protein [Streptococcus mitis SK597]
          Length = 159

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPV 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEEELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|300812571|ref|ZP_07092988.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496444|gb|EFK31549.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 158

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 7/153 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           I   I+PVI       V +  ++EK+   L+I+V++    + +    ELS+ +   LD  
Sbjct: 8   IQEAIEPVIIGHDCELVDLEYVKEKSQDYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +   +      ++   G ++   + 
Sbjct: 68  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYIHVGLYQKLEGEKVFEGHLLDLDDQ 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE + +  +     Q+ I    + SAR  +
Sbjct: 128 EIKLEIKIKTRRK----QLTIPRKQIASARFAI 156


>gi|15902521|ref|NP_358071.1| hypothetical protein spr0477 [Streptococcus pneumoniae R6]
 gi|116516675|ref|YP_815984.1| hypothetical protein SPD_0478 [Streptococcus pneumoniae D39]
 gi|149002223|ref|ZP_01827165.1| hypothetical protein CGSSp14BS69_01239 [Streptococcus pneumoniae
           SP14-BS69]
 gi|149005662|ref|ZP_01829401.1| hypothetical protein CGSSp18BS74_08855 [Streptococcus pneumoniae
           SP18-BS74]
 gi|149021507|ref|ZP_01835562.1| hypothetical protein CGSSp23BS72_06564 [Streptococcus pneumoniae
           SP23-BS72]
 gi|169833553|ref|YP_001694039.1| hypothetical protein SPH_0649 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|307126755|ref|YP_003878786.1| hypothetical protein SP670_0615 [Streptococcus pneumoniae 670-6B]
 gi|34222871|sp|Q8DQV6|RIMP_STRR6 RecName: Full=Ribosome maturation factor rimP
 gi|122279130|sp|Q04LW4|RIMP_STRP2 RecName: Full=Ribosome maturation factor rimP
 gi|226707991|sp|B1IA76|RIMP_STRPI RecName: Full=Ribosome maturation factor rimP
 gi|15458047|gb|AAK99281.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077251|gb|ABJ54971.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
 gi|147759538|gb|EDK66529.1| hypothetical protein CGSSp14BS69_01239 [Streptococcus pneumoniae
           SP14-BS69]
 gi|147762602|gb|EDK69562.1| hypothetical protein CGSSp18BS74_08855 [Streptococcus pneumoniae
           SP18-BS74]
 gi|147930203|gb|EDK81188.1| hypothetical protein CGSSp23BS72_06564 [Streptococcus pneumoniae
           SP23-BS72]
 gi|168996055|gb|ACA36667.1| conserved hypothetical protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|306483817|gb|ADM90686.1| conserved hypothetical protein [Streptococcus pneumoniae 670-6B]
 gi|332076984|gb|EGI87446.1| hypothetical protein SPAR148_0517 [Streptococcus pneumoniae
           GA17545]
          Length = 159

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVRIPYSLVSKARLAV 157


>gi|313124032|ref|YP_004034291.1| ribosome maturation factor rimp [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280595|gb|ADQ61314.1| Ribosome maturation factor rimP [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 158

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           I   I+PVI       V +  ++EK    L+I+V++    + +    ELS+ +   LD  
Sbjct: 8   ILEAIEPVIIGHDCELVDLEYVKEKSQYYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +   +      ++   G ++   + 
Sbjct: 68  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYIHVGLYQKLEGEKVFEGHLLDLDDQ 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE + +  +     Q+ I    + SAR  +
Sbjct: 128 EIKLEIKIKTRRK----QLTIPRKQIASARFAI 156


>gi|17546006|ref|NP_519408.1| hypothetical protein RSc1287 [Ralstonia solanacearum GMI1000]
 gi|34222937|sp|Q8XZV8|RIMP_RALSO RecName: Full=Ribosome maturation factor rimP
 gi|17428301|emb|CAD14989.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000]
          Length = 162

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 12/153 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN
Sbjct: 3   LTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVEN 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE---- 140
           +   + RLEVSSPG+DRP+    DF R+ G      + L    ++   G +   +     
Sbjct: 61  V--NYERLEVSSPGLDRPLRTLVDFARFAGLEAKVTLRLPVNGQKNFTGIVQAPAGEPGQ 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               LE E +         +  +   L  ARL+
Sbjct: 119 ERIGLEFEGKD----GPALLEFTLSELDRARLV 147


>gi|306832817|ref|ZP_07465952.1| protein of hypothetical function DUF150 [Streptococcus bovis ATCC
           700338]
 gi|304425052|gb|EFM28183.1| protein of hypothetical function DUF150 [Streptococcus bovis ATCC
           700338]
          Length = 146

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--N 84
           ++ P I+E  F  V +   +   + +L I +++ +G +T+ D  EL++ ISP+LD    +
Sbjct: 1   MVAPAIKE-PFELVDVEYEKMGSDYVLSILIDKPEG-ITVDDTAELTEIISPLLDAIKPD 58

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEVSSPG++RP+  K    +  G  V   +  +    +   G ++        
Sbjct: 59  PFPEQYMLEVSSPGLERPLKTKEALEKAVGSYVNVSLYKAIDKVKVFQGDLVAFDGDTLT 118

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++   +  K      + I + ++  ARL V
Sbjct: 119 IDYLDKTRKK----TVEIPYSTVAKARLAV 144


>gi|289167248|ref|YP_003445515.1| hypothetical protein smi_0375 [Streptococcus mitis B6]
 gi|288906813|emb|CBJ21647.1| conserved hypothetical protein [Streptococcus mitis B6]
          Length = 159

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIQS-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEVISPV 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|284052677|ref|ZP_06382887.1| hypothetical protein AplaP_14508 [Arthrospira platensis str.
           Paraca]
 gi|291568134|dbj|BAI90406.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 153

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 9/148 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV + +    V  +    +K  +L++ +   + + +L DCE +S+A+   
Sbjct: 5   LIPKIIDLATPVAKALGLEVVGAMFYTNQKPPVLRVDIRNLEQDTSLEDCERMSRALEEQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  ++I   Y LEVSSPG+ R +    DF+ + G  V           ++  GK++G  
Sbjct: 65  LDAVDVIPDAYILEVSSPGVSRSLSCDRDFISFKGFPVTVTTSEPYKGHKQQTGKLVGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSL 167
           E    + ++ R        QI+I    +
Sbjct: 125 EMAVHINQKGR--------QISIPNSLI 144


>gi|237752794|ref|ZP_04583274.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376283|gb|EEO26374.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 150

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 14/155 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER--DDGNMTLRDCEELSQA 75
           M ++ ++   I+ ++E + F    +  L+E  N +L+I + +  +  +++L DC+E+S A
Sbjct: 1   MTISPNLEDKIKVLVESLGFDLYDVLTLKENENQILRICITKNMESKSVSLDDCQEVSLA 60

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +SP+LDVE      Y LEVSSPGI+R +   + +      ++  + +     K++  GK+
Sbjct: 61  LSPLLDVEMPDFEKYYLEVSSPGIERVLKTLAHYKGAINELIKVKTLQEIAGKKEFKGKL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           +  SE+   LE             + I  +++  A
Sbjct: 121 VSVSESVLVLENG-----------VEIPLNAIKKA 144


>gi|322376137|ref|ZP_08050646.1| SP14.3 protein [Streptococcus sp. C300]
 gi|321278905|gb|EFX55949.1| SP14.3 protein [Streptococcus sp. C300]
          Length = 159

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP 
Sbjct: 7   IVELVREVIEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPA 64

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E   +  K      + I +  +  ARL V
Sbjct: 125 FEGDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|332184779|gb|AEE27033.1| clustered with transcription termination protein NusA [Francisella
           cf. novicida 3523]
          Length = 150

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 8/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ +S I 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEVSAIF 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I G Y LEVSSPG++R +          G  V    +     + K  G +     
Sbjct: 61  DVEDPISGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLSPVESQTKFKGVLERVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L+ E   E       I+  FD L   R+
Sbjct: 121 NNVILKLEDGKE-------ISFDFDELKKLRV 145


>gi|329115931|ref|ZP_08244648.1| hypothetical protein SPB_1207 [Streptococcus parauberis NCFD 2020]
 gi|326906336|gb|EGE53250.1| hypothetical protein SPB_1207 [Streptococcus parauberis NCFD 2020]
          Length = 160

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I    F  V +   +   + +L I +++ DG +T+ D   L++
Sbjct: 3   IANQSIIETVTEAVAPKILA-PFELVDVEYEKMGNDYVLSILIDK-DGGITVEDTTALTE 60

Query: 75  AISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 61  IISPVLDQITPDPFPEQYMLEVSSPGLERPLKTAESITNAVGSYINVSLYKAIDKIKVFQ 120

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        +   ++  +      + I + S+  ARL V
Sbjct: 121 GDLVAFDGQTLTINYLEKNRQK----TVEIPYQSVAKARLAV 158


>gi|298490030|ref|YP_003720207.1| hypothetical protein Aazo_0596 ['Nostoc azollae' 0708]
 gi|298231948|gb|ADI63084.1| protein of unknown function DUF150 ['Nostoc azollae' 0708]
          Length = 153

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV E++    V I L   ++  +L++ +     + +L DCE +S+ +   
Sbjct: 5   LVPQIIDLAIPVAEQLGLEVVGIVLHTNQRPPVLRVDIRNTQQDTSLDDCERMSRVLEAS 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R ++   +F+ + G  V          +Q+  G+++   
Sbjct: 65  LDAAEIIPDAYVLEVSSPGISRQLITDREFISFKGFPVVISTSQPYDGQQEWTGQLIRRG 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           ET  +L ++ R  +    L   +  D 
Sbjct: 125 ETKIYLNQKGRVVEIPRPLVTRVQLDE 151


>gi|282857787|ref|ZP_06266996.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
 gi|282584457|gb|EFB89816.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
          Length = 165

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             IS  ++ ++E + +  V    ++E    +L+++++R DG + L DCE  ++ I  +LD
Sbjct: 4   EKISGQLKTLVESLGYEFVGAETVKEAGSQILRVYIDR-DGGVGLDDCERSAKEIGALLD 62

Query: 82  -VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              +  E HY LEVSSPG++RP+ +  D+ R+ G  V   +      ++++   I G  +
Sbjct: 63  TAADAFEDHYLLEVSSPGLERPLFKAEDYARFAGRPVNVRLKGVYEGRRRVTAVIEGVKD 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
               L        D     + +    +  A L+  +E
Sbjct: 123 GSVLL--------DCGGEPLDLPLAEIQRAHLVYVEE 151


>gi|270292190|ref|ZP_06198405.1| conserved hypothetical protein [Streptococcus sp. M143]
 gi|293364177|ref|ZP_06610904.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|270279718|gb|EFA25560.1| conserved hypothetical protein [Streptococcus sp. M143]
 gi|291317355|gb|EFE57781.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
          Length = 175

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 80

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 141 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 173


>gi|50083627|ref|YP_045137.1| hypothetical protein ACIAD0367 [Acinetobacter sp. ADP1]
 gi|51316595|sp|Q6FF42|RIMP_ACIAD RecName: Full=Ribosome maturation factor rimP
 gi|49529603|emb|CAG67315.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
          Length = 174

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERD-----------DG----- 62
                +  +I P ++        I  + + K  LL+IF+++            DG     
Sbjct: 5   NKTQALHDLIAPAVQACDVNLWGIEFIPQGKRSLLRIFIDKPVDETAEPVLNEDGETELG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  ILDV + I G Y LEVSSPG DRP  +      + G  VA  +
Sbjct: 65  RGIGVQDCVRVTQQVGAILDVHDPISGEYALEVSSPGWDRPFFQLEQMSAYIGQQVALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        ++ E  G+       + I   ++  A LI  D
Sbjct: 125 ISAVENRRKFQAKLLLVDLENEMIQVEVDGKH-----VLEIDSHNIDKANLIYQD 174


>gi|291613947|ref|YP_003524104.1| hypothetical protein Slit_1480 [Sideroxydans lithotrophicus ES-1]
 gi|291584059|gb|ADE11717.1| protein of unknown function DUF150 [Sideroxydans lithotrophicus
           ES-1]
          Length = 141

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 13/150 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D++ +++  +  M +  V + +      L+++F+++ DG +++ DCE +S  +  +  VE
Sbjct: 2   DVAKLVETTLAGMGYELVDLEVSGRG--LMRVFMDKPDG-ISVEDCERVSNQLVRLFTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +   + RLEVSSPG+DR + ++SDF+R+ G     ++ +    ++   G I    +   
Sbjct: 59  GV--EYERLEVSSPGLDRVLKKESDFVRFAGQKAQIKVRVPLAGRKNFAGIIGEVKDGVV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            L        D++   +AI   ++  ARL+
Sbjct: 117 QL--------DVDGSLVAIELSNMDKARLV 138


>gi|125718694|ref|YP_001035827.1| hypothetical protein SSA_1901 [Streptococcus sanguinis SK36]
 gi|259595394|sp|A3CQ22|RIMP_STRSV RecName: Full=Ribosome maturation factor rimP
 gi|125498611|gb|ABN45277.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
 gi|325688732|gb|EGD30741.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK115]
 gi|332364629|gb|EGJ42398.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1059]
          Length = 177

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  +     ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDKTRRK----EVEIPYSLVSKARLAV 175


>gi|332362936|gb|EGJ40725.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK49]
          Length = 149

 Score =  140 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 9/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+LD  
Sbjct: 1   MREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPLLDQI 58

Query: 84  --NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++   E 
Sbjct: 59  KPDPFPEQYFLEVTSPGLERPLKTKEQLSNAVGSYIHVSLYKAVDKQKVFEGTLLSFEED 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +E   +  +     ++ I +  +  ARL V
Sbjct: 119 VLHMEYLDKTRRK----EVEIPYSLVSKARLAV 147


>gi|218887602|ref|YP_002436923.1| hypothetical protein DvMF_2516 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226701448|sp|B8DN15|RIMP_DESVM RecName: Full=Ribosome maturation factor rimP
 gi|218758556|gb|ACL09455.1| protein of unknown function DUF150 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 226

 Score =  140 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 74/183 (40%), Gaps = 30/183 (16%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG------------------ 62
           L   ++++  P+ + +      I +++   ++L+++V+   G                  
Sbjct: 6   LRDAVAAIATPLADALGIALWGIEIIDGGRMVLRVYVDAKPGMPVPADTAEATESATPEG 65

Query: 63  ---------NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN 113
                     +T+  C  LS+ +   LDVE+++   Y LEVSSPG++RP    +  + + 
Sbjct: 66  VALEGSTPEGVTIDQCARLSRQLGLALDVEDVVRDAYVLEVSSPGLERPFFEIAQVVPYV 125

Query: 114 GHVVACEIVLSS---GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           G  +   + +       ++K    I+           +     D +   I++++D +  A
Sbjct: 126 GRTIELTLAVPHPEWPGRRKFRADIVRVEGDTLTFLPDTAPRPDEDPAPISVAWDDVKKA 185

Query: 171 RLI 173
            LI
Sbjct: 186 HLI 188


>gi|331265776|ref|YP_004325406.1| hypothetical protein SOR_0379 [Streptococcus oralis Uo5]
 gi|326682448|emb|CBZ00065.1| conserved hypothetical protein [Streptococcus oralis Uo5]
          Length = 175

 Score =  140 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 80

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E   +  K      + I +  +  ARL V
Sbjct: 141 FEGDELTMEYMNKTRKK----TVQIPYSLVSKARLAV 173


>gi|313892594|ref|ZP_07826181.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
 gi|313118991|gb|EFR42196.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
          Length = 156

 Score =  140 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 79/144 (54%), Gaps = 4/144 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   + ++IQPV+E+     V +  + E+N +L+IF+++ DG + L DC+E+S +   ++
Sbjct: 6   IESAVEALIQPVLEKKGIEVVDVEYVRERNWILRIFIDK-DGGVDLNDCQEISVSAGELI 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIGKIMG 137
           D  ++I  +Y LEVSSPGIDR + +  DF+R+    V+ ++     +    ++    + G
Sbjct: 65  DKNDLISDNYMLEVSSPGIDRVLKKDKDFIRYKDSKVSVKLFAPVEELNLDKEFTAILNG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIA 161
                  L  +   E  +++ +I+
Sbjct: 125 LVNDEISLILDDGREIFLSKKKIS 148


>gi|312862565|ref|ZP_07722807.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
 gi|322517415|ref|ZP_08070288.1| protein of hypothetical function DUF150 [Streptococcus vestibularis
           ATCC 49124]
 gi|311101970|gb|EFQ60171.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
 gi|322123897|gb|EFX95456.1| protein of hypothetical function DUF150 [Streptococcus vestibularis
           ATCC 49124]
          Length = 157

 Score =  140 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +++V+ P I E  +  V I   +   + +L + +++  G +T+ D  +L++ ISP+
Sbjct: 5   IIDLVTAVVAPAIPE-PYELVDIEYEKIGSDYILSVLIDKP-GGITVEDTADLTEIISPL 62

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEVSSPG++RP+  K       G  +   +  +    +   G ++ 
Sbjct: 63  LDTIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSLYKAIDKIKIFQGDLLT 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  ++   +         + I + ++  ARL V
Sbjct: 123 FDGETLTIDYLDKTRHK----TVEIPYQTVAKARLAV 155


>gi|306824617|ref|ZP_07457962.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|315611733|ref|ZP_07886655.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
 gi|304433185|gb|EFM36156.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|315316148|gb|EFU64178.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
          Length = 175

 Score =  140 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 80

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E   +  K      + I +  +  ARL V
Sbjct: 141 FEGDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 173


>gi|226951827|ref|ZP_03822291.1| YhbC family protein [Acinetobacter sp. ATCC 27244]
 gi|226837367|gb|EEH69750.1| YhbC family protein [Acinetobacter sp. ATCC 27244]
          Length = 174

 Score =  140 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVER-----------DDG----- 62
             +  +  +I P +         I  L + K  LL+I++++           +DG     
Sbjct: 5   NKSQALFDLIAPAVAACDVDLWGIEFLPQGKRSLLRIYIDKAIDENAEPVLNEDGEVEEG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  + S    + G  VA  +
Sbjct: 65  RGIGVQDCVLVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLSQMSGYIGQQVALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        ++ E  G        + I   ++  A LI  D
Sbjct: 125 IAAVENRRKFQAKLLSVDLENEMIQVEVEG-----GQVLEIDSHNIDKANLIYQD 174


>gi|329667118|gb|AEB93066.1| hypothetical protein LJP_0738 [Lactobacillus johnsonii DPC 6026]
          Length = 158

 Score =  140 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 2   TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 61

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 62  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTFEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++    LE + +  +     +I I    + S+R  V
Sbjct: 122 KDLNQDQIVLEVKIKTRRK----EITIPRKVIASSRFAV 156


>gi|302874659|ref|YP_003843292.1| hypothetical protein Clocel_1784 [Clostridium cellulovorans 743B]
 gi|307690727|ref|ZP_07633173.1| hypothetical protein Ccel74_21406 [Clostridium cellulovorans 743B]
 gi|302577516|gb|ADL51528.1| protein of unknown function DUF150 [Clostridium cellulovorans 743B]
          Length = 153

 Score =  140 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 2/143 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I S +  VI+++ +    I  + E     L+ ++E + G + L DCE++S+AIS I+DV
Sbjct: 9   EIESRMGSVIKDLGYDLYHIEYVVEGGENFLRFYIENEAG-IGLNDCEKVSRAISDIIDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I+ +Y LEVSSPG+ R + +   F R+ G  V  ++      ++K    +    +  
Sbjct: 68  EDPIDENYYLEVSSPGVFRTLFKDEHFKRYIGEEVTVKLKSLLNGRKKFDAVLDNIDDEN 127

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
            +++          ++   ++ +
Sbjct: 128 IYVKANNEVITVPKKILKQVTLN 150


>gi|331002484|ref|ZP_08326002.1| hypothetical protein HMPREF0491_00864 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410300|gb|EGG89734.1| hypothetical protein HMPREF0491_00864 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 154

 Score =  140 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 6/148 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                  ++ +  E+ F  V +  ++E     L+ + ++  G + + DC ++S+ +S  L
Sbjct: 8   VKRTEEFLEKLSSELDFEVVDVEFVKEAGEHYLRAYCDK-TGGIGIEDCADISRHLSDWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  + I+  Y LEVSSPG+ R + +  DFLR  G  V  ++  +    +   G +     
Sbjct: 67  DENDFIDEGYILEVSSPGLGRTLKKDKDFLRELGKEVELKLYKAREGVKDFEGVLKSFDG 126

Query: 141 TGFFLEKEKRGE----KDMNELQIAISF 164
               +E E + E    K++  +++ I F
Sbjct: 127 DNITVEIENKDEVFTKKEIANIRLKIDF 154


>gi|325695171|gb|EGD37072.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK150]
 gi|328944977|gb|EGG39134.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1087]
 gi|332358011|gb|EGJ35844.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1056]
          Length = 177

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLSDAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  +     ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDKTRRK----EVEIPYSLVSKARLAV 175


>gi|327467114|gb|EGF12624.1| hypothetical protein HMPREF9386_2224 [Streptococcus sanguinis
           SK330]
          Length = 177

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILAH-YELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADTVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  +     ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDKTRRK----EVEIPYSLVSKARLAV 175


>gi|294649081|ref|ZP_06726524.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292825027|gb|EFF83787.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 174

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 23/175 (13%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVER-----------DDG----- 62
             +  +  +I P +         I  L + K  LL+I++++           +DG     
Sbjct: 5   NKSQALFDLIAPAVAACDVDLWGIEFLPQGKRSLLRIYIDKAIDENAEPVLNEDGEVEEG 64

Query: 63  -NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
             + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  + S    + G  VA  +
Sbjct: 65  RGIGVQDCVLVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLSQMSGYIGQQVALRL 124

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           + +  +++K   K++        ++ E  G +      + I   ++  A LI  D
Sbjct: 125 IAAVENRRKFQAKLLSVDLENEMIQVEVEGAQ-----VLEIDSHNIDKANLIYQD 174


>gi|323144580|ref|ZP_08079169.1| hypothetical protein HMPREF9444_01845 [Succinatimonas hippei YIT
           12066]
 gi|322415656|gb|EFY06401.1| hypothetical protein HMPREF9444_01845 [Succinatimonas hippei YIT
           12066]
          Length = 175

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 8/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I  +++P+IE        +     ++  LLQIF++  DG ++   C +++  +SP 
Sbjct: 18  IEEKIDELVRPLIEASDLILWGVRYRGGRDSALLQIFIDSKDG-VSADTCGDITNMLSPA 76

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  +II   Y LEVSSPG DR +        + G  +  E+ +  G ++K  G +   +
Sbjct: 77  LDAADIIAPAYILEVSSPGFDRILFTLDQARAYIGKKIKAEVRIPVGGRRKFEGVLEEVT 136

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           E             D    Q+ I+F ++  ARL+
Sbjct: 137 EDNSL------KINDKISGQVEIAFSNISVARLV 164


>gi|327462401|gb|EGF08726.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1057]
          Length = 177

 Score =  140 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  +     ++ I +  +  ARL V
Sbjct: 143 FEEEVLHMEYLDKTRRK----EVEIPYSLVSKARLAV 175


>gi|306830061|ref|ZP_07463247.1| hypothetical protein HMPREF8571_1603 [Streptococcus mitis ATCC
           6249]
 gi|304427774|gb|EFM30868.1| hypothetical protein HMPREF8571_1603 [Streptococcus mitis ATCC
           6249]
          Length = 175

 Score =  140 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +G +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEIISPV 80

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLS 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 141 FEEEELTVEYMDKTRKK----TVQIPYSLVSKARLAV 173


>gi|104774215|ref|YP_619195.1| hypothetical protein Ldb1336 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514303|ref|YP_813209.1| hypothetical protein LBUL_1245 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122274965|sp|Q049V1|RIMP_LACDB RecName: Full=Ribosome maturation factor rimP
 gi|122397110|sp|Q1G9P5|RIMP_LACDA RecName: Full=Ribosome maturation factor rimP
 gi|103423296|emb|CAI98137.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093618|gb|ABJ58771.1| hypothetical protein LBUL_1245 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 158

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 7/153 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           I   I+PVI       V +  ++EK+   L+I+V++    + +    ELS+ +   LD  
Sbjct: 8   ILEAIEPVIIGHDCELVDLEYVKEKSQDYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 67

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +   +      ++   G ++   + 
Sbjct: 68  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYIHVGLYQKLEGEKVFEGHLLDLDDQ 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE + +  +     Q+ I    + SAR  +
Sbjct: 128 EIKLEIKIKTRRK----QLTIPRKQIASARFAI 156


>gi|148270199|ref|YP_001244659.1| hypothetical protein Tpet_1066 [Thermotoga petrophila RKU-1]
 gi|166977875|sp|A5ILL0|RIMP_THEP1 RecName: Full=Ribosome maturation factor rimP
 gi|147735743|gb|ABQ47083.1| protein of unknown function DUF150 [Thermotoga petrophila RKU-1]
          Length = 150

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELS 73
           +F +M +   +    + + EE       +    E +  +L+I ++   G +++RDCE  S
Sbjct: 1   MFEEM-ILEKVRKEAERIAEEQGLEIFDVQYRRESRGWVLRIIIDNPVGYVSVRDCELFS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + I   LD E++IE  Y LEVSSPG+DRP+    D++R+ G +          D +  IG
Sbjct: 60  REIERFLDREDLIEHSYTLEVSSPGLDRPLRGPKDYVRFTGKLAKIVTK----DGKTFIG 115

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +I    +    +  EKR           I+ D +  A L V
Sbjct: 116 RIESFVDGTITISDEKRKY--------EINIDDVKRANLEV 148


>gi|290581069|ref|YP_003485461.1| hypothetical protein SmuNN2025_1543 [Streptococcus mutans NN2025]
 gi|254997968|dbj|BAH88569.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 163

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 11/166 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEM---SFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCE 70
           +  +      +  +++PV+  +    F  V I   +   N +L I V++ +G +T+ D  
Sbjct: 1   MCKEGNTIATLVDIVRPVVAPVIPKPFELVDIEYEKLGGNYVLSILVDKPEG-ITVEDTA 59

Query: 71  ELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           +L+  ISP+LD    +     Y LE+SSPG++RP+      +   GH +   +  +    
Sbjct: 60  DLTDIISPLLDTIKPDPFPEQYMLEISSPGLERPLKTAQSLMNAVGHYINVSLYQAIDKV 119

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   G +         +    + ++      + I +  +  ARL V
Sbjct: 120 KVFEGDLTAFDGETLTMTYLDKTQQK----TVTIPYKMVAKARLAV 161


>gi|42519363|ref|NP_965293.1| hypothetical protein LJ1491 [Lactobacillus johnsonii NCC 533]
 gi|51316714|sp|Q74IS4|RIMP_LACJO RecName: Full=Ribosome maturation factor rimP
 gi|41583651|gb|AAS09259.1| hypothetical protein LJ_1491 [Lactobacillus johnsonii NCC 533]
          Length = 158

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 2   TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 61

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 62  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTFEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++    LE + +  +      I I    + S+R  V
Sbjct: 122 KDLNQDQIVLEVKIKTRRK----DITIPRKVIASSRFAV 156


>gi|289423156|ref|ZP_06424971.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
 gi|289156487|gb|EFD05137.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
          Length = 154

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 83/158 (52%), Gaps = 12/158 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +A  +  ++QP+ +   F  V +  ++E     L++ ++ +DG + L +CE++S+ ++P
Sbjct: 4   NIAQQVEKLVQPIADLYGFELVDVEYVKEAGIYYLRVIIDSEDG-IGLDECEKVSRDLNP 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG--DKQKLIGKIM 136
           ILD +++IE +Y LEV SPGIDR + R  ++ +++G +V  ++  ++     +     + 
Sbjct: 63  ILDEKDMIEENYLLEVCSPGIDRILKRDHEYEKYSGKLVEVKLYANNDIVKGKHFEADLC 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G  +    L  + +        ++ ++   +   RL V
Sbjct: 123 GLEDDNIVLLYKGK--------ELKLNRKEVAQVRLAV 152


>gi|323350355|ref|ZP_08086019.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           VMC66]
 gi|322123428|gb|EFX95104.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           VMC66]
 gi|327472755|gb|EGF18182.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK408]
          Length = 177

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 9/159 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  IS
Sbjct: 23  TTIVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIIS 80

Query: 78  PILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           P+LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G +
Sbjct: 81  PLLDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTL 140

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        +E   +  +     ++ I +  +  ARL V
Sbjct: 141 LSFEGEVLHMEYLDKTRRK----EVEIPYSLVSKARLAV 175


>gi|313673262|ref|YP_004051373.1| hypothetical protein Calni_1302 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940018|gb|ADR19210.1| protein of unknown function DUF150 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 157

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 12/154 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +    + +  +       +  + E     L+IF+++++  +TL DC   S+ IS  
Sbjct: 8   IVERVKEYSEKIAPKFGVEIFDVKFVREPSGYTLRIFLDKEN--LTLEDCANFSKEISKW 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLIGKIMGT 138
           LD E++I   Y LEVSSPG++RP+    D+ ++ G     E+       ++   G I G 
Sbjct: 66  LDKEDLIPHKYNLEVSSPGLNRPLRNIDDYKKYIGRKCKVELFKKDSSGRKNYTGYIKGV 125

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 ++ +K         +I++S+  +    L
Sbjct: 126 DGEVILIDLKKE--------EISLSYSDIKKGNL 151


>gi|324992029|gb|EGC23951.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK405]
 gi|324994122|gb|EGC26036.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK678]
 gi|325697659|gb|EGD39544.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK160]
 gi|327490546|gb|EGF22327.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1058]
          Length = 177

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILP-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E    +E   +  +     ++ I +  +  ARL V
Sbjct: 143 FAEDVLHMEYLDKTRRK----EVEIPYSLVSKARLAV 175


>gi|317153846|ref|YP_004121894.1| hypothetical protein Daes_2142 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944097|gb|ADU63148.1| protein of unknown function DUF150 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 156

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 75/153 (49%), Gaps = 6/153 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ +I+P +E +      + S  + +  +++I+++  DG +T+  C ++S+ +S +L
Sbjct: 6   EDTLADIIRPEVEGLGCTLWGLASPSKGERRIIRIYIDGPDG-VTIDQCAKVSRQVSLLL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VE+ I G Y LEVSSPG+DR     +    + G  V   +  +   ++K+ G +     
Sbjct: 65  EVEDTIPGAYILEVSSPGLDRRFFSTAQMADFVGKQVTALLYEARDGRRKVTGVLKSIGA 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  ++    D     + ++++ L   RL+
Sbjct: 125 DA----GQESFTLDEGGQDVTLAWNDLKEVRLV 153


>gi|15644523|ref|NP_229575.1| hypothetical protein TM1778 [Thermotoga maritima MSB8]
 gi|34223165|sp|Q9X299|RIMP_THEMA RecName: Full=Ribosome maturation factor rimP
 gi|4982356|gb|AAD36841.1|AE001815_15 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 150

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELS 73
           +F +M +   +    + + EE       +    E +  +L+I ++   G +++RDCE  S
Sbjct: 1   MFEEM-ILEKVRKEAERIAEEQGLEIFDVQYRRESRGWVLRIIIDNPVGYVSVRDCELFS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +   LD E+ IE  Y LEVSSPG+DRP+    D++R+ G +          D +  IG
Sbjct: 60  REMERFLDREDFIEHSYTLEVSSPGLDRPLRGPRDYVRFTGKLAKIVTK----DGKTFIG 115

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +I    +    +  EKR           I+ D +  A L V
Sbjct: 116 RIESFVDGTITISDEKRKY--------EINIDDVKRANLEV 148


>gi|332707467|ref|ZP_08427515.1| hypothetical protein LYNGBM3L_38480 [Lyngbya majuscula 3L]
 gi|332353764|gb|EGJ33256.1| hypothetical protein LYNGBM3L_38480 [Lyngbya majuscula 3L]
          Length = 153

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +  P+ +++    V+      +   +L++++     + +L DCE +S+A+   
Sbjct: 5   LIPQLIDLATPLAQDLGLEIVEALFQTNRRPPVLRVYIRNPIRDTSLDDCERMSRALEAQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD + II   Y LE+SSPGI + +    +F+ + G  V  +       +Q+  G+++   
Sbjct: 65  LDAKEIILDTYVLEISSPGITQDLTTDREFISFKGFGVIVQTFEPYQGQQEWRGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E+G +L  + R          AI    +   +L
Sbjct: 125 ESGVYLNLKGRA--------FAIPRQLVSRVKL 149


>gi|332522698|ref|ZP_08398950.1| hypothetical protein STRPO_1027 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313962|gb|EGJ26947.1| hypothetical protein STRPO_1027 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 176

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 9/166 (5%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCE 70
           E  +  +  +   ++  + PVI+   F  V +   +   + +L I V+++ G +T+ D  
Sbjct: 15  EGIVIANQHIIDTVTETVSPVIKS-PFELVDVEYEKMGSDYILSILVDKE-GGITVEDTT 72

Query: 71  ELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           EL++ ISP+LD    +     Y LEVSSPG++RP+  K    +  G  V   +  +    
Sbjct: 73  ELTEIISPLLDQISPDPFPDQYMLEVSSPGLERPLKTKEAIEKAVGSYVNVSLYKAIDKV 132

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   G ++        ++   +    +    + I + ++  ARL V
Sbjct: 133 KVFQGDLISFDGKTLTIDYLDKTRHKV----VDIPYQTVAKARLAV 174


>gi|254876276|ref|ZP_05248986.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842297|gb|EET20711.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 152

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ +S I 
Sbjct: 4   LLDDLYEIVEPITADLGYILWGIEVVGAGKLTIRIFIDHENG-VSVDDCQVVSKEVSAIF 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++R +          G  V    +     + K  G +     
Sbjct: 63  DVEDPISDKYVLEVSSPGMNRQIFNIIQAQALVGFNVKAVTLTPVESQTKFKGVLERVEG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L+ +          +++  FD L   R+
Sbjct: 123 NNVILKLDD-------GREVSFDFDELKKFRV 147


>gi|329121256|ref|ZP_08249883.1| hypothetical protein HMPREF9083_0344 [Dialister micraerophilus DSM
           19965]
 gi|327470190|gb|EGF15653.1| hypothetical protein HMPREF9083_0344 [Dialister micraerophilus DSM
           19965]
          Length = 156

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 79/144 (54%), Gaps = 4/144 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   + ++IQPV+E+     V +  + E+N +L+IF+++ DG + L DC+E+S +   ++
Sbjct: 6   IESAVEALIQPVLEKKGIEVVDVEYVRERNWILRIFIDK-DGGVDLNDCQEISVSAGELI 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIGKIMG 137
           D  ++I  +Y LEVSSPGIDR + +  DF+R+    V+ ++     +    ++    + G
Sbjct: 65  DKNDLISDNYMLEVSSPGIDRVLKKDKDFIRYKDSKVSVKLFAPVEELNLDKEFAAILNG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIA 161
                  L  +   E  +++ +I+
Sbjct: 125 LVNDEISLILDDGREIFLSKKKIS 148


>gi|238852617|ref|ZP_04643027.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
 gi|282850816|ref|ZP_06260190.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
 gi|311110886|ref|ZP_07712283.1| SP14.3 protein [Lactobacillus gasseri MV-22]
 gi|259585807|sp|Q044C1|RIMP_LACGA RecName: Full=Ribosome maturation factor rimP
 gi|238834763|gb|EEQ26990.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
 gi|282557768|gb|EFB63356.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
 gi|311066040|gb|EFQ46380.1| SP14.3 protein [Lactobacillus gasseri MV-22]
          Length = 158

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 2   TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 61

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 62  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTYEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++    LE + +  +     +I I    + S+R  V
Sbjct: 122 KDLNQNQIVLEVKIKTRRK----EITIPRKVIASSRFAV 156


>gi|167627170|ref|YP_001677670.1| hypothetical protein Fphi_0946 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667732|ref|ZP_04755310.1| hypothetical protein FphipA2_03111 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|226696044|sp|B0TWR1|RIMP_FRAP2 RecName: Full=Ribosome maturation factor rimP
 gi|167597171|gb|ABZ87169.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 150

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++ ++G +++ DC+ +S+ +S I 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGAGKLTIRIFIDHENG-VSVDDCQVVSKEVSAIF 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++R +          G  V    +     + K  G +     
Sbjct: 61  DVEDPISDKYVLEVSSPGMNRQIFNIIQAQALVGFNVKAVTLTPVESQTKFKGVLERVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L+ +          +++  FD L   R+
Sbjct: 121 NNVILKLDD-------GREVSFDFDELKKFRV 145


>gi|209527730|ref|ZP_03276226.1| protein of unknown function DUF150 [Arthrospira maxima CS-328]
 gi|209491851|gb|EDZ92210.1| protein of unknown function DUF150 [Arthrospira maxima CS-328]
          Length = 153

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 9/150 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV + +    V  +    +K  +L++ +   + + +L DCE +S+A+   
Sbjct: 5   LIPKIIDLATPVAKPLGLEVVGAMFYTNQKPPVLRVDIRNLEQDTSLEDCERMSRALEEQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  ++I   Y LEVSSPG+ R +    DF+ + G  V           ++  GK++G  
Sbjct: 65  LDAVDVIPDAYILEVSSPGVSRSLSCDRDFISFKGFPVTVTTSEPYKGHKQQSGKLVGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
           E    + ++ R        QI+I    +  
Sbjct: 125 EMAVHINQKGR--------QISIPNSLITE 146


>gi|319937396|ref|ZP_08011803.1| hypothetical protein HMPREF9488_02638 [Coprobacillus sp. 29_1]
 gi|319807762|gb|EFW04355.1| hypothetical protein HMPREF9488_02638 [Coprobacillus sp. 29_1]
          Length = 153

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 5/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+S+IQP+++        I  + EKN   L+IF+E++DG++ +  C  +S+ IS  
Sbjct: 1   MLEKITSLIQPILDNHDVYLDDIEYVSEKNEWYLRIFIEKNDGHLDMDTCVAVSEDISLK 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+II   Y LEVSSPG ++P+       +  G  V  +    +    ++ G +    
Sbjct: 61  LDEEDIITNEYYLEVSSPGAEKPLKTLEKVQQSIGEYVYIQFKKPTLGMDEVYGTLFNVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L+   +  K   +    I +D +   RL V
Sbjct: 121 GEMIELQYMVKNIKKKCD----IKYDDIAFIRLAV 151


>gi|259585811|sp|A6T0Z0|RIMP_JANMA RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 16/158 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISP 78
            +S++I+  +  M +  V     +    L+++F++      D G +T+ DCE+++  +  
Sbjct: 2   QLSALIEKTVVGMGYELVNFE--QAARGLVRVFIDFTPEDADKGAITVEDCEKVTHQLLH 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS---GDKQKLIGKI 135
           +L VEN    + RLEVSSPG+DRP+ + SD++R+ G     ++ +      +++   G +
Sbjct: 60  VLTVEN--ANYERLEVSSPGLDRPLKKLSDYVRFAGAEALVKLRMPMPNAANRKSFQGIL 117

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    LE E          ++  +   +  A L+
Sbjct: 118 QEPVGETLALEFEGND----GPAKLEFTLADVDKAHLV 151


>gi|325686966|gb|EGD28990.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK72]
          Length = 177

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    LE   +  +     ++ I++  +  ARL V
Sbjct: 143 FEEDVLHLEYLDKTRRK----EVEITYSLVSKARLAV 175


>gi|170288838|ref|YP_001739076.1| hypothetical protein TRQ2_1046 [Thermotoga sp. RQ2]
 gi|281412458|ref|YP_003346537.1| protein of unknown function DUF150 [Thermotoga naphthophila RKU-10]
 gi|226734063|sp|B1LAP5|RIMP_THESQ RecName: Full=Ribosome maturation factor rimP
 gi|170176341|gb|ACB09393.1| protein of unknown function DUF150 [Thermotoga sp. RQ2]
 gi|281373561|gb|ADA67123.1| protein of unknown function DUF150 [Thermotoga naphthophila RKU-10]
          Length = 150

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELS 73
           +F +M +   +    + + EE       +    E +  +L+I ++   G +++RDCE  S
Sbjct: 1   MFEEM-ILEKVRKEAERIAEEQGLEIFDVQYRRESRGWILRIIIDNPMGYVSVRDCELFS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +   LD E++IE  Y LEVSSPG+DRP+    D++R+ G +          D +  IG
Sbjct: 60  REMERFLDREDLIEHSYTLEVSSPGLDRPLRGPRDYVRFTGKLAKIVTK----DGKTFIG 115

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +I    +    +   K+           I+ D +  A L V
Sbjct: 116 RIESFVDGTITISDGKKKY--------EINIDDVKRANLEV 148


>gi|148651971|ref|YP_001279064.1| hypothetical protein PsycPRwf_0155 [Psychrobacter sp. PRwf-1]
 gi|172048444|sp|A5WBS3|RIMP_PSYWF RecName: Full=Ribosome maturation factor rimP
 gi|148571055|gb|ABQ93114.1| protein of unknown function DUF150 [Psychrobacter sp. PRwf-1]
          Length = 166

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 18/168 (10%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVER------DDGNMTLRDCEEL 72
                ++ +I P +         +  L +    LL+I++E        D  +T+ +C  +
Sbjct: 5   NKVTQLTDIIAPAVAACDVALWGVEFLPQGGRSLLRIYIEALPEDKAADKQVTIENCAAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD----K 128
           +  +S +L+V + I G Y LEVSSPG+DRP         + G  +   ++ + G     +
Sbjct: 65  THQVSGVLEVHDPIAGEYVLEVSSPGLDRPFFAPEQMTDYMGQTINLRLIQAVGSGSSKR 124

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +K+ GK+    +    +          +  +  I+ D++  A LI  D
Sbjct: 125 RKVTGKLEQLDDKQLSV-------VTADGERYDIALDNIDKANLIYQD 165


>gi|259585815|sp|A4G7S9|RIMP_HERAR RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 16/158 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISP 78
            +S++I+  +  M +  V     +    L++++++      D G++T+ DCE+++  +  
Sbjct: 2   QLSALIEKTVVGMGYELVNFE--QAARGLVRVYIDFTPEDADKGSITVEDCEKVTHQLLH 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS---GDKQKLIGKI 135
           +L VEN    + RLEVSSPG+DRP+ + SD++R+ G     ++ L      +++   G +
Sbjct: 60  VLTVEN--ANYERLEVSSPGLDRPLKKLSDYVRFAGAEALVKLRLPMPNAANRKSFQGIL 117

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    LE E     +    ++  +   +  A L+
Sbjct: 118 QEPVGETLALEFEG----NEGPAKLEFTLADVDKAHLV 151


>gi|332704825|ref|ZP_08424913.1| Ribosome maturation factor rimP [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554974|gb|EGJ52018.1| Ribosome maturation factor rimP [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 170

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 10/163 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELS 73
           +     +   I+   + VIE M      + ++ + +   + ++VE   G +++    E S
Sbjct: 1   MAVTTEITNRIAQAARTVIEPMGLSLWGVEIVLDGRGQTVLVYVESPTG-VSVEQLAEAS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + I  +LDVE+ I G YRLE+SSPG +R          + G  V     +  GD++K  G
Sbjct: 60  RNIGLVLDVEDFIPGTYRLELSSPGFERSFFSTEQMRDYMGEKVEIRTSVPLGDRRKFRG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
            +    E    +E E +           + ++ +  ARLIV D
Sbjct: 120 ILKEVREDSIAVEAEGQ--------LFNLRWEDVKKARLIVED 154


>gi|317051741|ref|YP_004112857.1| hypothetical protein Selin_1571 [Desulfurispirillum indicum S5]
 gi|316946825|gb|ADU66301.1| protein of unknown function DUF150 [Desulfurispirillum indicum S5]
          Length = 155

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 81/148 (54%), Gaps = 7/148 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S ++QP+++E++     + L+     +L+++++++ G ++L +CE +S  +  +LDVE+
Sbjct: 10  VSELLQPIVQELALELFDVELINASGWILRVYLDKE-GGVSLDECERVSIELGTLLDVED 68

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           II   Y LEVSSPG++R +  ++DF ++ G +          + +  IG +   S+T   
Sbjct: 69  IIGFRYTLEVSSPGVNRKLRHRADFEKYLGRLARIRTSEVLLNTKLHIGYLADISDTELT 128

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARL 172
           + ++ RG      + I +    +  A L
Sbjct: 129 IREKDRG------ILIPVPLAIIEKANL 150


>gi|313888257|ref|ZP_07821928.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845660|gb|EFR33050.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 153

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  +I  + + V EE+ +  V I      K+ LL IF+ + +G + L DC ++S+
Sbjct: 1   MNKKELKKEIYPLAEEVAEELGYEIVDIEFQNGSKHDLLSIFIYKKEG-IDLNDCTDMSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           ++   LD   I++  Y LE+SSPG+DRP+  K D+ R  G+ V  ++      K++    
Sbjct: 60  SLEKKLDNLEILKNPYYLEISSPGLDRPLKTKDDYRRNIGNEVDVKLYAPIDGKKEFSFV 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
           +    +   +   + +        + AI   S+ S
Sbjct: 120 LDKYDDENVYCTLDGK--------EFAIPIKSISS 146


>gi|299139240|ref|ZP_07032416.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX8]
 gi|298598920|gb|EFI55082.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX8]
          Length = 193

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 34/185 (18%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-------------------- 61
             I +    +    S   V +      K+  L++F+E+D                     
Sbjct: 6   ETIRATADRIAASHSLEVVDLEFTGGSKHRTLRVFLEKDAAARAKFTAEAASNEEAGLPK 65

Query: 62  -------GNMTLRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWN 113
                    +T  DC   ++    +LDVE++I G  Y LE SSPG++R +++ +D+ R+ 
Sbjct: 66  GVPVETLSGVTHEDCANFARDFGTVLDVEDLIPGAEYTLETSSPGLERKLLKAADYERFK 125

Query: 114 GHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE-----KEKRGEKDMNELQIAISFDSLL 168
           G +V  +        +   G+++    T   L+     ++ + +K +    + IS  ++ 
Sbjct: 126 GSLVKVQTFSPVDSNRHFTGRLVAFEGTNLTLDLAAVKQKGKAKKTLTAQTVEISLANVE 185

Query: 169 SARLI 173
            A L+
Sbjct: 186 KANLV 190


>gi|300866112|ref|ZP_07110840.1| Ribosome maturation factor rimP [Oscillatoria sp. PCC 6506]
 gi|300335908|emb|CBN55998.1| Ribosome maturation factor rimP [Oscillatoria sp. PCC 6506]
          Length = 153

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+ E +    V       +N  +L++ +     +  L DCE +S+A+   
Sbjct: 5   LIPQIIDLATPLAETLGLEVVGAVFHTNQNPPILRVDIRNPQQDTGLEDCERMSKALEEK 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ +I+   Y LE+SSPG+ R +    +F+ + G  V  +   +    ++ +G+++   
Sbjct: 65  LDMADILPDAYVLEISSPGLSRSLASDREFISFKGFPVIVKTSEAYNGLKEWVGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   ++ ++ R         IAI    +   +L
Sbjct: 125 EKAVYINQKGR--------PIAIPRSLITQVQL 149


>gi|289522944|ref|ZP_06439798.1| hypothetical protein HMPREF1705_00858 [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503487|gb|EFD24651.1| hypothetical protein HMPREF1705_00858 [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 161

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 9/141 (6%)

Query: 35  EMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRL 92
            + +  V + L+ E   ++L+I++    G + ++DCE +S+ +   LD  E I  G Y L
Sbjct: 21  GLGYDFVGMELVHEHGRMILRIYINTP-GGINVKDCETVSRKVDKFLDSREEIFGGRYYL 79

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE 152
           EVSSPG+D P+    DF  + G  V  +     G ++   GKI+        L       
Sbjct: 80  EVSSPGLDAPLFYIKDFKNYVGKTVRIKTHDPVGSRRNFKGKIIEI------LSNNDIKL 133

Query: 153 KDMNELQIAISFDSLLSARLI 173
              +  +I I F ++  ARL+
Sbjct: 134 GLDDGTEILIPFQNISKARLV 154


>gi|118594130|ref|ZP_01551477.1| hypothetical protein MB2181_00640 [Methylophilales bacterium
           HTCC2181]
 gi|118439908|gb|EAV46535.1| hypothetical protein MB2181_00640 [Methylophilales bacterium
           HTCC2181]
          Length = 145

 Score =  138 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 76/152 (50%), Gaps = 11/152 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +A D+ S I+ ++ ++ +  V + ++     LL++F+++ +  +T+ DC  +S  ++  L
Sbjct: 1   MAFDVESFIEKMVTQLGYELVDLEIINH-GQLLRVFIDKPE-IVTIDDCVLVSNQLNHAL 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            VE       RLE+SSPG+DR + +  DF R++G  +  +      +++   G + G   
Sbjct: 59  SVEEEF-DFGRLEISSPGVDRVIKKLEDFGRFDGEKIKIKTRSPISNRRNFSGVLRGIKA 117

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               LE +           + I F+++  ARL
Sbjct: 118 GFILLEFDGSI--------VEIDFENIDRARL 141


>gi|332976701|gb|EGK13539.1| hypothetical protein HMPREF9373_1208 [Psychrobacter sp. 1501(2011)]
          Length = 166

 Score =  138 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 18/168 (10%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVER------DDGNMTLRDCEEL 72
                ++ +I P +         +  L +    LL+I++E        D  +T+ +C  +
Sbjct: 5   NKVTQLTDIIAPAVAACDVALWGVEFLPQGGRSLLRIYIESLPEDKAADKQVTIENCAAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG----DK 128
           +  +S +L+V + I G Y LEVSSPG+DRP         + G  +   ++ + G     +
Sbjct: 65  THQVSGVLEVHDPIAGEYVLEVSSPGLDRPFFAPEQMTDYVGQTLNLRLIQAVGAGSSKR 124

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +K+ GK+    +    +             Q  I+ D++  A LI  D
Sbjct: 125 RKVTGKLEQLGDKQLSI-------VTPEGEQFDIALDNIDKANLIYQD 165


>gi|332295449|ref|YP_004437372.1| Ribosome maturation factor rimP [Thermodesulfobium narugense DSM
           14796]
 gi|332178552|gb|AEE14241.1| Ribosome maturation factor rimP [Thermodesulfobium narugense DSM
           14796]
          Length = 159

 Score =  138 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 9/152 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + ++++ V+ ++ F    +   ++ K  +L++F++  +  ++L DCE +S+ +S 
Sbjct: 5   DIKEKLLNIVEKVLLDIGFELYDLEYFKQGKRWILRVFIDNLEKPISLDDCELVSKKLSA 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD  ++I   + LEVSSPGI+R + + SDF R+ G  +         +   +IG + G 
Sbjct: 65  ILDYYDLIPESFYLEVSSPGIERKLKKDSDFTRFKGEEIIVIFQKP--NISPIIGILEGI 122

Query: 139 SETGFFL------EKEKRGEKDMNELQIAISF 164
              G ++       KEK    D+ E++I   F
Sbjct: 123 DSDGNYIIVNTGKSKEKINRNDVKEVRIHFRF 154


>gi|149194181|ref|ZP_01871279.1| hypothetical protein CMTB2_03813 [Caminibacter mediatlanticus TB-2]
 gi|149136134|gb|EDM24612.1| hypothetical protein CMTB2_03813 [Caminibacter mediatlanticus TB-2]
          Length = 147

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 18/153 (11%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +VI+ ++E+       I    E  +   ++++ +  G + L DC  ++  ISPI D
Sbjct: 4   EELKNVIKNIVEDNGCELYDIEETTEGEHKYFRVYITKP-GGVNLNDCTAINNLISPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ ++G Y LEVSSPG++R + +   F +  G  V   +     D  K+ G++    + 
Sbjct: 63  VEDPVDGKYFLEVSSPGVERKLTKSEHFEKSIGENVKVTL----NDGTKIKGQLKSFVDN 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              + KEK            ++F+ +  A+  V
Sbjct: 119 IAEIGKEK------------VNFEDIKKAKTYV 139


>gi|113477416|ref|YP_723477.1| hypothetical protein Tery_3979 [Trichodesmium erythraeum IMS101]
 gi|110168464|gb|ABG53004.1| protein of unknown function DUF150 [Trichodesmium erythraeum
           IMS101]
          Length = 172

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 9/148 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I     P+ + +    V       ++  +L++ +     +  L DCE +S AI   
Sbjct: 24  LVPQIIKFATPIAKSLGLELVGAVFHTNQHPPILRLDIRHPHQDTGLDDCERMSNAIGEQ 83

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  NII   Y LE+SSPGI + +    DF+ + G  VA         K   IG+++   
Sbjct: 84  LDAANIIPEPYLLEISSPGISKFLDNDRDFIAFKGFNVAVNTSEPYKGKNYWIGQLVSRD 143

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSL 167
           +T  ++ ++ R        Q +I    +
Sbjct: 144 QTAVYINQKGR--------QASIPRSLI 163


>gi|24378910|ref|NP_720865.1| hypothetical protein SMU.417 [Streptococcus mutans UA159]
 gi|34222873|sp|Q8DVQ3|RIMP_STRMU RecName: Full=Ribosome maturation factor rimP
 gi|24376793|gb|AAN58171.1|AE014888_9 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 163

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 11/166 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEM---SFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCE 70
           +  +      +  +++PV+  +    F  V I   +   N +L I V++ +G +T+ D  
Sbjct: 1   MCKEGNTIATLVDIVRPVVAPVIPKPFELVDIEYEKLGGNYVLSILVDKPEG-ITVEDTA 59

Query: 71  ELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           +L+  ISP+LD    +     Y LE+SSPG++RP+      +   GH +   +  +    
Sbjct: 60  DLTDIISPLLDTIKPDPFPEQYMLEISSPGLERPLKTAQSLMNAVGHYINVSLYQAIDKV 119

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   G +         +    + ++      + I +  +  ARL V
Sbjct: 120 KVFEGDLTAFDGETLKMTYLDKTQQK----TVTIPYKMVAKARLAV 161


>gi|157414451|ref|YP_001481707.1| hypothetical protein C8J_0131 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|205425409|sp|A8FJU3|RIMP_CAMJ8 RecName: Full=Ribosome maturation factor rimP
 gi|157385415|gb|ABV51730.1| hypothetical protein C8J_0131 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|315931533|gb|EFV10500.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 140

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAGLSFYDDELVSENGRKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  AR  V
Sbjct: 118 LENKEKT------TINFNDIKKARTFV 138


>gi|313889634|ref|ZP_07823277.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121931|gb|EFR45027.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 176

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCE 70
           E  +  +  +   +   + PVI    F  V +   +   + LL I V+R+ G +T+ D  
Sbjct: 15  EGIVIANQHIIDTVMETVSPVIRP-PFELVDVEYEKMGSDYLLSILVDRE-GGITVEDTT 72

Query: 71  ELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           EL++ ISP+LD    +     Y LEVSSPG++RP+  K    +  G  V   +  +    
Sbjct: 73  ELTEIISPLLDQISPDPFPDQYMLEVSSPGLERPLKTKEAIEKAVGSYVNVSLYKAIDKV 132

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   G ++        ++   +    +    +AI + ++  ARL V
Sbjct: 133 KVFQGDLISFDGETLMIDYLDKTRHKV----VAIPYQTVAKARLAV 174


>gi|159027909|emb|CAO89716.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 156

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+  +  P+ E +    V I     K   +L++ +    G+  L DCE++S+++   
Sbjct: 5   LIPDLLHLATPIAENLGLEVVDIVFQTNKRPPVLRVDIRNLAGDTGLEDCEQMSRSLETA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD + I+ G Y LE+SSPGI R +  + +F  + G  V      S G  Q+  GK+ G  
Sbjct: 65  LDSQEILPGAYVLEISSPGISRQLSSEREFHSFKGFPVIVTGQDSQGKPQEWRGKLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           E   +L ++ R         I++  D 
Sbjct: 125 EQSIYLNQKGRSLTIDRTTVISVRLDE 151


>gi|169824467|ref|YP_001692078.1| hypothetical protein FMG_0770 [Finegoldia magna ATCC 29328]
 gi|303233823|ref|ZP_07320477.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
 gi|226708072|sp|B0S1E8|RIMP_FINM2 RecName: Full=Ribosome maturation factor rimP
 gi|167831272|dbj|BAG08188.1| conserved hypothetical protein associated with Nus operon
           [Finegoldia magna ATCC 29328]
 gi|302495257|gb|EFL55009.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
          Length = 154

 Score =  137 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           + P+I++       +         +L  ++E+DDG +++ DCE ++  IS  LD  + I 
Sbjct: 14  LSPLIKDTGIEFYDVEYSNNNGKNILTFYIEKDDGLISIDDCELINNKISDKLDEIDPIS 73

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE++S  I  P  R  DF +  G+VV   +      K++  G +   ++T   LE 
Sbjct: 74  DPYYLEIASVDITTPFTRDKDFKKNLGNVVIVNLYQKLDSKKEFKGILTDFNDTEISLEL 133

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIVTD 176
           EK+        +I I   ++ S +L + D
Sbjct: 134 EKK--------EIKIERSNISSIKLSLFD 154


>gi|317495159|ref|ZP_07953529.1| hypothetical protein HMPREF0432_00131 [Gemella moribillum M424]
 gi|316914581|gb|EFV36057.1| hypothetical protein HMPREF0432_00131 [Gemella moribillum M424]
          Length = 154

 Score =  137 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + ++     ++  +    +  ++E +   L+I+ ++ DG +TL DC  LS+ ++
Sbjct: 1   MSIVQRVKAIADEQTKDTVYSLYDVEYVKEGSEFFLRIYFDK-DGGLTLDDCVLLSEKLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I   Y LEVSSPGI+R +    + +   G  V  +      ++++  G I+ 
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERELRNLEEVIDSIGKHVYIKTYEKVDNQKEFYGDILD 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    +E + +     +     IS++ +   RL V
Sbjct: 120 VEDKEITIEYKDKARVKKSI----ISYEKIAKIRLAV 152


>gi|237734615|ref|ZP_04565096.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229382435|gb|EEO32526.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 167

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I ++I+P++E        I  L+E     L+IFVE+++G++ +  C  +S+AIS
Sbjct: 13  MELLDTIKTLIKPILENNDVYLDDIEYLQENGEWYLRIFVEKNEGSLDMDTCVAVSEAIS 72

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E+ I+G Y LEVSSPG+++P+          G  V  + +  +    ++ G I  
Sbjct: 73  LKMDEEDPIKGEYYLEVSSPGVEKPLKTFEQVKASVGKYVYAKFINPTAGMDEVEGFIKT 132

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E   +  K     +I I + ++   RL V
Sbjct: 133 IEDETIEFEYLVKNIKK----RIKIDYSNIKFIRLAV 165


>gi|259645132|sp|Q10XM0|RIMP_TRIEI RecName: Full=Ribosome maturation factor rimP
          Length = 153

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 9/148 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I     P+ + +    V       ++  +L++ +     +  L DCE +S AI   
Sbjct: 5   LVPQIIKFATPIAKSLGLELVGAVFHTNQHPPILRLDIRHPHQDTGLDDCERMSNAIGEQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  NII   Y LE+SSPGI + +    DF+ + G  VA         K   IG+++   
Sbjct: 65  LDAANIIPEPYLLEISSPGISKFLDNDRDFIAFKGFNVAVNTSEPYKGKNYWIGQLVSRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSL 167
           +T  ++ ++ R        Q +I    +
Sbjct: 125 QTAVYINQKGR--------QASIPRSLI 144


>gi|134095612|ref|YP_001100687.1| hypothetical protein HEAR2435 [Herminiimonas arsenicoxydans]
 gi|133739515|emb|CAL62566.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 172

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 16/158 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISP 78
            +S++I+  +  M +  V     +    L++++++      D G++T+ DCE+++  +  
Sbjct: 13  QLSALIEKTVVGMGYELVNFE--QAARGLVRVYIDFTPEDADKGSITVEDCEKVTHQLLH 70

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS---GDKQKLIGKI 135
           +L VEN    + RLEVSSPG+DRP+ + SD++R+ G     ++ L      +++   G +
Sbjct: 71  VLTVEN--ANYERLEVSSPGLDRPLKKLSDYVRFAGAEALVKLRLPMPNAANRKSFQGIL 128

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    LE E     +    ++  +   +  A L+
Sbjct: 129 QEPVGETLALEFEG----NEGPAKLEFTLADVDKAHLV 162


>gi|307747095|gb|ADN90365.1| UPF0090 protein [Campylobacter jejuni subsp. jejuni M1]
          Length = 140

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAGLSFYDDELVSENGRKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F  +  A+  V
Sbjct: 118 LENKEKT------TINFSDIRKAKTFV 138


>gi|57237145|ref|YP_178157.1| hypothetical protein CJE0133 [Campylobacter jejuni RM1221]
 gi|218561819|ref|YP_002343598.1| hypothetical protein Cj0138 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|34223082|sp|Q9PIY9|RIMP_CAMJE RecName: Full=Ribosome maturation factor rimP
 gi|81354202|sp|Q5HX28|RIMP_CAMJR RecName: Full=Ribosome maturation factor rimP
 gi|57165949|gb|AAW34728.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
 gi|112359525|emb|CAL34309.1| conserved hypothetical protein Cj0138 [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315057578|gb|ADT71907.1| hypothetical protein CJS3_0137 [Campylobacter jejuni subsp. jejuni
           S3]
 gi|315926922|gb|EFV06284.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 140

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE+ + 
Sbjct: 3   LEALCKEAGLSFYDDELVSENGRKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVESPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  AR  V
Sbjct: 118 LENKEKT------TINFNDIKKARTFV 138


>gi|169350437|ref|ZP_02867375.1| hypothetical protein CLOSPI_01205 [Clostridium spiroforme DSM 1552]
 gi|169292757|gb|EDS74890.1| hypothetical protein CLOSPI_01205 [Clostridium spiroforme DSM 1552]
          Length = 155

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I  +I+P+++        I  +++K    L+IFVE+++G + +  C  +S+ IS
Sbjct: 1   MELLNKIKEMIEPILQSNDVYLDDIEYVQDKGEWYLRIFVEKNEGFLDMDTCVAVSEQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I+G Y LEVSSPG+++P+          G  V  +         ++ G I  
Sbjct: 61  QKLDEEDPIKGEYYLEVSSPGVEKPLKTFEQVKSSIGKYVYAKFYNPIAGLDEVEGFINS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E   +  K   +++    ++++   RL V
Sbjct: 121 IEDETIEFEYLVKNIKKKVKIE----YNNIKFIRLAV 153


>gi|222099942|ref|YP_002534510.1| hypothetical protein CTN_0968 [Thermotoga neapolitana DSM 4359]
 gi|254807290|sp|B9K861|RIMP_THENN RecName: Full=Ribosome maturation factor rimP
 gi|221572332|gb|ACM23144.1| Hypothetical Protein CTN_0968 [Thermotoga neapolitana DSM 4359]
          Length = 150

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 14/159 (8%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELS 73
           +F +M +   +    + + E+       I    E +  +L++ ++   G +++RDCE  S
Sbjct: 1   MFEEM-IVEKVRKEAERIAEKQGLEIFDIQYRRESRGWVLRVVIDNPVGYVSVRDCELFS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +   LD E++IE  Y LEVSSPG+DRP+    D+ R+ G +          D +  IG
Sbjct: 60  RELERFLDREDLIEHSYTLEVSSPGLDRPLRGPKDYQRFTGKLAKIITK----DGKTFIG 115

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +I    +    +  EK            I  + +  A L
Sbjct: 116 RIESFVDGIVTISDEKGKH--------EIDIEDVRKANL 146


>gi|254468932|ref|ZP_05082338.1| hypothetical protein KB13_1157 [beta proteobacterium KB13]
 gi|207087742|gb|EDZ65025.1| hypothetical protein KB13_1157 [beta proteobacterium KB13]
          Length = 158

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 10/153 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G   D+  +I   I+ + +  V+       + L++IF++  +  +++ DC ++S  ++ +
Sbjct: 12  GFVMDLEKIISESIQNIGYELVECE-HNHNSGLIRIFIDNGN-LISVDDCVKVSNHLNRV 69

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L VE +     RLEVSSPG+DR +++ +D+ R+ G  +  ++     +++K  GK++ + 
Sbjct: 70  LSVE-LDYDFSRLEVSSPGVDRKLIKLADYKRFEGEKIKIKLYSPINNQKKFDGKLIASD 128

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    +              + + FD +  ARL
Sbjct: 129 EKKIKILLSDEKI-------LEVPFDEIQMARL 154


>gi|283955583|ref|ZP_06373077.1| hypothetical protein C1336_000030016 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792926|gb|EFC31701.1| hypothetical protein C1336_000030016 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 140

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAGLSFYDDELVSENGRKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V       + +K+K   KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKIT----ANEKEKFEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  AR  V
Sbjct: 118 LENKEKT------TINFNDIKKARTFV 138


>gi|253995582|ref|YP_003047646.1| hypothetical protein Mmol_0209 [Methylotenera mobilis JLW8]
 gi|253982261|gb|ACT47119.1| protein of unknown function DUF150 [Methylotenera mobilis JLW8]
          Length = 161

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 83/166 (50%), Gaps = 26/166 (15%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-----GNMTLRDCEELSQAIS 77
            D+ ++I+  + ++ +  V +  +  +  LL++F+++ +      ++ + DC  +S  + 
Sbjct: 2   QDLQTLIEKSVSQLGYELVDLE-ISNRGKLLRVFIDKQNPADSKDSVNIDDCVLVSNQLG 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---------- 127
            +L VE+ I  + RLEVSSPG+DR + +++D++R+ G  V+ ++ +   D          
Sbjct: 61  NLLAVEHEI-DYDRLEVSSPGMDRVLKKEADYVRFVGERVSIKLRVGIKDEGPNATETTL 119

Query: 128 -KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            ++  +G I G  +    LE E    K        ++  ++  ARL
Sbjct: 120 PRKTFLGLIQGVEDGHLLLEFEGFTYK--------MALSNIDKARL 157


>gi|152981795|ref|YP_001354187.1| hypothetical protein mma_2497 [Janthinobacterium sp. Marseille]
 gi|151281872|gb|ABR90282.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 170

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 16/158 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISP 78
            +S++I+  +  M +  V     +    L+++F++      D G +T+ DCE+++  +  
Sbjct: 11  QLSALIEKTVVGMGYELVNFE--QAARGLVRVFIDFTPEDADKGAITVEDCEKVTHQLLH 68

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS---GDKQKLIGKI 135
           +L VEN    + RLEVSSPG+DRP+ + SD++R+ G     ++ +      +++   G +
Sbjct: 69  VLTVEN--ANYERLEVSSPGLDRPLKKLSDYVRFAGAEALVKLRMPMPNAANRKSFQGIL 126

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    LE E          ++  +   +  A L+
Sbjct: 127 QEPVGETLALEFEGND----GPAKLEFTLADVDKAHLV 160


>gi|284925431|gb|ADC27783.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 140

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE+ + 
Sbjct: 3   LEALCKEAGLSFYDDELVSENGKKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVESPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  AR  V
Sbjct: 118 LENKEKT------TINFNDIKKARTFV 138


>gi|238854743|ref|ZP_04645073.1| conserved hypothetical protein [Lactobacillus jensenii 269-3]
 gi|260663975|ref|ZP_05864828.1| conserved hypothetical protein [Lactobacillus jensenii SJ-7A-US]
 gi|282932866|ref|ZP_06338263.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
 gi|313472266|ref|ZP_07812758.1| SP14.3 protein [Lactobacillus jensenii 1153]
 gi|238832533|gb|EEQ24840.1| conserved hypothetical protein [Lactobacillus jensenii 269-3]
 gi|239529662|gb|EEQ68663.1| SP14.3 protein [Lactobacillus jensenii 1153]
 gi|260561861|gb|EEX27830.1| conserved hypothetical protein [Lactobacillus jensenii SJ-7A-US]
 gi|281302901|gb|EFA95106.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 158

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 73/159 (45%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +++++ P+ E+     V +  ++E+N   L+I+V+R +  + + +   LS+ +S
Sbjct: 2   TKIVDLVTNLVSPIAEKRGDELVDVEYVKEQNQYYLRIYVDRGESGIDIEEIAALSEMVS 61

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ +     +          ++   G +
Sbjct: 62  EELDKLNPDPFTEPYMLELSSPGLERPIKNERDWEKAVNKYIHVACYQKIDGQKAFDGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   +    L+ + +        ++ I   ++ +AR  +
Sbjct: 122 LSKDDDKITLKIKIKTRTK----ELEIPVGAIANARFAI 156


>gi|329915248|ref|ZP_08276236.1| clustered with transcription termination protein NusA
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327544953|gb|EGF30294.1| clustered with transcription termination protein NusA
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 161

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 16/158 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISP 78
            +  +I+  +  M +  V     +    LL+++++      + G +T+ DCE+++  +  
Sbjct: 2   QLLELIEKTVVGMEYELVDFE--QAARGLLRVYIDFPPEQAERGMITVEDCEKVTHQLLH 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIGKI 135
           +L VEN +    RLEVSSPG+DRP+ + +D+LR+ G     ++ +       ++   G +
Sbjct: 60  VLTVENAVYE--RLEVSSPGLDRPLKKLADYLRFAGMEAIVKLRMPMPGAANRKSFQGIL 117

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    LE E +    M E  +A     +  A L+
Sbjct: 118 HAPEGDQIKLEFEGKEGSAMLEFTLA----DVDKAHLV 151


>gi|166364177|ref|YP_001656450.1| YhbC family protein [Microcystis aeruginosa NIES-843]
 gi|226734161|sp|B0JU70|RIMP_MICAN RecName: Full=Ribosome maturation factor rimP
 gi|166086550|dbj|BAG01258.1| YhbC family protein [Microcystis aeruginosa NIES-843]
          Length = 156

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+  +  P+ E +    V I     K   +L++ +    G+  L DCE++S+A+   
Sbjct: 5   LIPDLLHLAIPIAENLGLEVVDIVFQTNKRPPVLRVDIRNLAGDTGLEDCEQMSRALETA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD + I+ G Y LE+SSPGI R +  + +F  + G  V      S G  Q+  GK+ G  
Sbjct: 65  LDSQEILPGAYVLEISSPGISRQLSSEREFQSFKGFPVIVTGQDSQGKPQEWRGKLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           E   +L ++ R         I++  D 
Sbjct: 125 EQSIYLNQKGRSLTIDRTTVISVRLDE 151


>gi|302380608|ref|ZP_07269073.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
 gi|302311551|gb|EFK93567.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
          Length = 154

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           + P+I++       +         +L  ++E+DDG +++ DCE ++  IS  LD  + I 
Sbjct: 14  LSPLIKDTGIEFYDVEYSNNNGKNILTFYIEKDDGLISIDDCELINNKISDKLDEIDPIS 73

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE++S  I  P  R  DF +  G+VV   +      +++  G +   ++    LE 
Sbjct: 74  DPYYLEIASVDITTPFTRDKDFKKNLGNVVIVNLYQKLDSQKEFKGILKDFNDKEISLEL 133

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIVTD 176
           EK+        +I I   ++ S +L + D
Sbjct: 134 EKK--------EIKIERSNISSIKLSLFD 154


>gi|332366409|gb|EGJ44160.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK355]
          Length = 177

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPEG-ITVNDTADLTDIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  +     ++ I +  +  ARL V
Sbjct: 143 FEEDVLRMEYLDKTRRK----EVEILYSLVSKARLAV 175


>gi|317484450|ref|ZP_07943363.1| hypothetical protein HMPREF0179_00714 [Bilophila wadsworthia 3_1_6]
 gi|316924310|gb|EFV45483.1| hypothetical protein HMPREF0179_00714 [Bilophila wadsworthia 3_1_6]
          Length = 205

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 20/169 (11%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-----------------NMTLR 67
           I+ ++ P+   +      + L      + +I+V+   G                  +T+ 
Sbjct: 10  ITELVTPLAASLGLAVWGVELGGAARPIARIYVDVLPGAEPAPSEKASDDDLLPQGVTID 69

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG- 126
            C ELS+     LDVE+    ++ LE+SSPG+ RP  +      + G  +   +      
Sbjct: 70  QCAELSRLAGLALDVEDPFATNWTLEISSPGLQRPFFKIDQLRNYVGRELEVVLAAPLDT 129

Query: 127 --DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              ++K  G +   ++  F L       K     ++ I++  +  A L+
Sbjct: 130 WPGRKKFSGVLAAVADEEFTLSLPDTSRKAEEPEEVTIAWPFVRKATLV 178


>gi|167756907|ref|ZP_02429034.1| hypothetical protein CLORAM_02456 [Clostridium ramosum DSM 1402]
 gi|167703082|gb|EDS17661.1| hypothetical protein CLORAM_02456 [Clostridium ramosum DSM 1402]
          Length = 155

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I ++I+P++E        I  L+E     L+IFVE+++G++ +  C  +S+AIS
Sbjct: 1   MELLDTIKTLIKPILENNDVYLDDIEYLQENGEWYLRIFVEKNEGSLDMDTCVAVSEAIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E+ I+G Y LEVSSPG+++P+          G  V  + +  +    ++ G I  
Sbjct: 61  LKMDEEDPIKGEYYLEVSSPGVEKPLKTFEQVKASVGKYVYAKFINPTAGMDEVEGFIKT 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E   +  K     +I I + ++   RL V
Sbjct: 121 IEDETIEFEYLVKNIKK----RIKIDYSNIKFIRLAV 153


>gi|300704338|ref|YP_003745941.1| hypothetical protein RCFBP_20140 [Ralstonia solanacearum CFBP2957]
 gi|299072002|emb|CBJ43332.1| conserved protein of unknown function [Ralstonia solanacearum
           CFBP2957]
          Length = 149

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 36  MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
           M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVS
Sbjct: 1   MGYELVEVERAPAG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--HYERLEVS 56

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE----TGFFLEKEKRG 151
           SPG+DRP+   +DF R+ G  V   + L    ++   G +   +         LE E + 
Sbjct: 57  SPGLDRPLRTLTDFTRFAGQEVKVTLRLPVDGQKNFTGIVQAPAGEPGQERIGLEFEGKD 116

Query: 152 EKDMNELQIAISFDSLLSARLI 173
                   +  +   L  ARL+
Sbjct: 117 ----GPALLEFTLSELDRARLV 134


>gi|327459331|gb|EGF05677.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1]
          Length = 177

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  + I   +   + +L +FV++ +G +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELIDIEYGKMGGDYVLSVFVDKSEG-ITVNDTADLTDIISPL 82

Query: 80  LDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYINVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  +     ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDKTRRK----EVEIPYSLVSKARLAV 175


>gi|319957625|ref|YP_004168888.1| hypothetical protein Nitsa_1895 [Nitratifractor salsuginis DSM
           16511]
 gi|319420029|gb|ADV47139.1| protein of unknown function DUF150 [Nitratifractor salsuginis DSM
           16511]
          Length = 146

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 14/148 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   I  ++            + E +  + ++++ + DG + L  C ++S  +SP+LDV 
Sbjct: 3   LEDQIAKIVRSHGAEFYDTETVNENDQTIYRVYITK-DGGVDLDTCADISNDLSPLLDVH 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             + G Y LEVSSPGI+R + +   F    G  V  +        +KL G +    E G 
Sbjct: 62  PPVGGKYFLEVSSPGIERTLKKPRHFQSAVGERVKLK----IAGGEKLRGILESADEEGI 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSAR 171
            L  +        E +   S+  +L AR
Sbjct: 118 ILRNK--------EGEHRYSYPQILKAR 137


>gi|126640414|ref|YP_001083398.1| hypothetical protein A1S_0334 [Acinetobacter baumannii ATCC 17978]
          Length = 157

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 23/161 (14%)

Query: 34  EEMSFRSVQISLL-EEKNLLLQIFVERD-----------DG------NMTLRDCEELSQA 75
           E        I  L + K  LL+I+++R            DG       + + DC  ++Q 
Sbjct: 2   EACGVDLWGIEFLPQGKRSLLRIYIDRPVDENAEPVINEDGEVEQGRGIGVEDCVRVTQQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  +LDV + I G Y LEVSSPG DRP  +      + G  VA  ++ +  +++K   K+
Sbjct: 62  VGAMLDVHDPISGEYALEVSSPGWDRPFFQLEQLQGYIGQQVALRLIAAVENRRKFQAKL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +        ++ E  G+  ++     I  +++  A LI  D
Sbjct: 122 LAVDLENEEIQVEVEGKHVLD-----IDSNNIDKANLIYQD 157


>gi|124267112|ref|YP_001021116.1| hypothetical protein Mpe_A1923 [Methylibium petroleiphilum PM1]
 gi|226732163|sp|A2SH42|RIMP_METPP RecName: Full=Ribosome maturation factor rimP
 gi|124259887|gb|ABM94881.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 177

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 18/157 (11%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM---------TLRDCEELSQAI 76
            + ++  +    +  V+         LL++F++R  G +         T+ DCE++++ +
Sbjct: 4   QAAVEKTVTGFGYELVECE--RGSQGLLRVFIDRVPGQVYDGGPGEFVTVEDCEKVTRQL 61

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             +L+VEN    + RLEVSSPG+DRP+ + +D+ R+ G  +   + L    ++K  G + 
Sbjct: 62  QYVLEVENC--DYSRLEVSSPGLDRPLKKSADYARFAGERIDITLKLPFQGRKKYQGVL- 118

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             S   + L      +  +    +  + + +  ARL+
Sbjct: 119 AASGEAWELHFNDGKQDQV----LGFTLEEVRDARLV 151


>gi|58427438|gb|AAW76475.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 160

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 11/125 (8%)

Query: 53  LQIFVE-----RDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           ++++++     + +  + + DCE +S+ +S  LDVE+ I GHY LEVSSPG+DRP+    
Sbjct: 1   MRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGHYTLEVSSPGVDRPLFTLE 60

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
            F R  G      + L+   +++  G+I+                  ++   + I FD++
Sbjct: 61  QFARHAGESTKIVLKLAQDGRRRFQGEILRIDAEA------GAVVFAIDGKDVQIGFDNI 114

Query: 168 LSARL 172
             AR+
Sbjct: 115 DKARI 119


>gi|150021291|ref|YP_001306645.1| hypothetical protein Tmel_1413 [Thermosipho melanesiensis BI429]
 gi|259645126|sp|A6LMV9|RIMP_THEM4 RecName: Full=Ribosome maturation factor rimP
 gi|149793812|gb|ABR31260.1| protein of unknown function DUF150 [Thermosipho melanesiensis
           BI429]
          Length = 147

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 14/154 (9%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  + Q + EE       +    +     L+I ++     ++ +DCE +S+ +  
Sbjct: 3   DIVSQVKDIAQKICEEFHLELFDVKYYNKSGRWFLEIIIDNPYDYISTKDCENVSRKLEF 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  NII   Y L VSSPG++RP+    DF R+ G     +   +       IG I   
Sbjct: 63  ELDKINIIPNKYYLTVSSPGLNRPLRNVKDFERFTGKKAKIKTREN-----TYIGYIKNV 117

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +     E + +         I   F+ +  A L
Sbjct: 118 VDNIITFETDGK--------FIEFKFEEIKKANL 143


>gi|289805472|ref|ZP_06536101.1| hypothetical protein Salmonellaentericaenterica_13917 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 86

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNG 114
             Y LEVSSPG+DRPM     +  + G
Sbjct: 60  VAYNLEVSSPGLDRPMFTADHYASFRG 86


>gi|300691723|ref|YP_003752718.1| hypothetical protein RPSI07_2078 [Ralstonia solanacearum PSI07]
 gi|299078783|emb|CBJ51443.1| conserved protein of unknown function [Ralstonia solanacearum
           PSI07]
          Length = 149

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 12/142 (8%)

Query: 36  MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
           M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVS
Sbjct: 1   MGYELVEVERAPAG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--NYERLEVS 56

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE----TGFFLEKEKRG 151
           SPG+DRP+   +DF R+ G      + L    ++   G +   +         LE E + 
Sbjct: 57  SPGLDRPLRTLTDFTRFAGQEAKVTLRLPVNGQKNFTGIVQAPAGEPGQERIGLEFEGKD 116

Query: 152 EKDMNELQIAISFDSLLSARLI 173
                   +  +   L  ARL+
Sbjct: 117 ----GPALLEFTLSELDRARLV 134


>gi|259501584|ref|ZP_05744486.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|302191442|ref|ZP_07267696.1| hypothetical protein LineA_05504 [Lactobacillus iners AB-1]
 gi|309807190|ref|ZP_07701164.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
 gi|259167102|gb|EEW51597.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|308166411|gb|EFO68616.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
          Length = 158

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 7/156 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  L
Sbjct: 5   IDKVIEVITPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQL 64

Query: 81  DVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           D+   + +   Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++  
Sbjct: 65  DLINPDPLPDPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDY 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 LE     +    + +IAI  + + + R  +
Sbjct: 125 DMDKIILEI----KIKTQQKKIAIPRNMIANIRFAI 156


>gi|315653431|ref|ZP_07906353.1| protein of hypothetical function DUF150 [Lactobacillus iners ATCC
           55195]
 gi|315489356|gb|EFU78996.1| protein of hypothetical function DUF150 [Lactobacillus iners ATCC
           55195]
          Length = 158

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  L
Sbjct: 5   IDKVIEVITPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQL 64

Query: 81  DVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           D+   + +   Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++  
Sbjct: 65  DLINPDPLPDPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDY 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 LE     +    + +I I  + + + R  +
Sbjct: 125 DMDKIILEI----KIKTQQQKITIPRNMIANIRFAI 156


>gi|268319260|ref|YP_003292916.1| hypothetical protein FI9785_775 [Lactobacillus johnsonii FI9785]
 gi|262397635|emb|CAX66649.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 158

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R    + + +   LS+ +S
Sbjct: 2   TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPVGIDIEEIANLSELVS 61

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 62  EKLDKLDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTFEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++    LE + +  +      I I    + S+R  V
Sbjct: 122 KDLNQDQIVLEVKIKTRRK----DITIPRKVIASSRFAV 156


>gi|260889855|ref|ZP_05901118.1| UPF0090 protein [Leptotrichia hofstadii F0254]
 gi|260860461|gb|EEX74961.1| UPF0090 protein [Leptotrichia hofstadii F0254]
          Length = 162

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  +    I+  ++EM+     +  + +     L+++VE+ DG  TL DC + S+ I  I
Sbjct: 4   ILNEFEKKIKQHLKEMNLELADLEYVRDGGYNYLRVYVEKLDGTTTLDDCIDFSREIDGI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            D  ++IE  + LEVS+PG++R + +  DF+R+ G  +  +   +    +K IGK+    
Sbjct: 64  AD--DLIEEKFFLEVSTPGVERRLRKPKDFVRFLGERINVQAKSNIEGAKKFIGKLEKFE 121

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               FL  +K       E  + I    L  A LI
Sbjct: 122 NDTVFLLDDK------LEKIVEIPLSKLKKANLI 149


>gi|71064648|ref|YP_263375.1| hypothetical protein Psyc_0067 [Psychrobacter arcticus 273-4]
 gi|91207994|sp|Q4FVL7|RIMP_PSYA2 RecName: Full=Ribosome maturation factor rimP
 gi|71037633|gb|AAZ17941.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 166

 Score =  134 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 18/167 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVER------DDGNMTLRDCEELSQ 74
             +++++I P +         I    + N  LL+I++E        +  +T+ +C  ++ 
Sbjct: 7   VTELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIENCAAVNH 66

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD----KQK 130
            +S IL+V + I G + LEVSSPG DR          + G  V+  ++ + G+    ++K
Sbjct: 67  QVSGILEVHDPIAGEFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEGDKKRRK 126

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
             G +     T   L          +  Q  I+  ++  A LI  D 
Sbjct: 127 ATGTLNSIDGTSLKL-------TATDGEQFEIALSNIDKANLIYEDA 166


>gi|257791561|ref|YP_003182167.1| hypothetical protein Elen_1813 [Eggerthella lenta DSM 2243]
 gi|325833208|ref|ZP_08165714.1| hypothetical protein HMPREF9404_3885 [Eggerthella sp. HGA1]
 gi|257475458|gb|ACV55778.1| protein of unknown function DUF150 [Eggerthella lenta DSM 2243]
 gi|325485590|gb|EGC88058.1| hypothetical protein HMPREF9404_3885 [Eggerthella sp. HGA1]
          Length = 159

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 11/152 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +   + P  E+     V + +   K    ++++++  DG ++  +       I+ ++
Sbjct: 6   EQQLLDALAPRAEQEGVEIVTVEVAGAKKAPTIRVYIDTPDG-VSFDELSSAQAWINDLM 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  +   G Y LEVSSPGIDRP+     F R+ G     +       +    G I     
Sbjct: 65  DELDPFPGAYTLEVSSPGIDRPLRTAEHFARFVGDTAVLKT-QPVDGRGSWTGAIASVEG 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L        D++  +  I  D++  A L
Sbjct: 124 DVVVL--------DVDGAEARIPMDTIKRAHL 147


>gi|86153804|ref|ZP_01072007.1| YlxS [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842765|gb|EAQ59977.1| YlxS [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 140

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  AR  V
Sbjct: 118 LENKEKT------TINFNDIKKARTFV 138


>gi|34558305|ref|NP_908120.1| hypothetical protein WS2018 [Wolinella succinogenes DSM 1740]
 gi|51316745|sp|Q7MQU0|RIMP_WOLSU RecName: Full=Ribosome maturation factor rimP
 gi|34484024|emb|CAE11020.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 142

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 17/146 (11%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
              I+ +++        + LL+E    +L++++ ++ G ++L DC  +S  ISP+LDVE+
Sbjct: 7   QEKIEKLVQSCGCNLYDLLLLKENERSILRLYITKEVG-VSLDDCAMVSDLISPLLDVED 65

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            + G Y LEVSSPGI+RP+ R + +    G +   +      DK ++ G+I    ET   
Sbjct: 66  PLAGEYFLEVSSPGIERPLKRPAHYQHALGELARIK----FADKNEIEGEIEAADETSVK 121

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSA 170
           L+ E+            I +  +  A
Sbjct: 122 LKGEEP-----------IPYSLIKKA 136


>gi|315123740|ref|YP_004065744.1| YlxS [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315017462|gb|ADT65555.1| YlxS [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 140

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + R   F +  G +V         +K+K   KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSRIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  AR  +
Sbjct: 118 LENKEKT------TINFNDIKKARTFI 138


>gi|262037341|ref|ZP_06010806.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264]
 gi|261748598|gb|EEY35972.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264]
          Length = 178

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 11/166 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +       IQ  ++ +      +  ++E     L+++VE+ DG  +L DC ELS  I  +
Sbjct: 20  ILSKFEKEIQDSLDSLDLELSDLEYIQEGGYNYLRVYVEKKDGTTSLDDCIELSSKIDGL 79

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            D  N+I   + LEVS+PG++R + ++ DF+R++G  +          K+   GK+    
Sbjct: 80  AD--NLINEKFYLEVSTPGVERKLKKEKDFIRFSGEKIKLHSKSQIEGKKTFEGKLEKFE 137

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               FL  +  G+       + I    L  A LI   EL   +L  
Sbjct: 138 NDTIFLNDQNIGK------TVEIPLSKLKKANLI--YELPNDTLEK 175


>gi|255019835|ref|ZP_05291911.1| transcription termination protein NusA-like protein
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970764|gb|EET28250.1| transcription termination protein NusA-like protein
           [Acidithiobacillus caldus ATCC 51756]
          Length = 176

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 9/155 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   +   I      M    V + LL   +++ LQ+F+E+D+G +T+ DC  +S+ +S 
Sbjct: 27  GLEERLLEGIAEQAAAMGCGVVDVRLLRVGRSVTLQVFIEKDEGAVTIEDCAAVSRQLSV 86

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDVEN I G YRLEVSSPG+DRP+ R++DF R+ G +   E+      +++  G+++  
Sbjct: 87  WLDVENPIAGAYRLEVSSPGLDRPLKREADFQRFVGALAEIELRGLRDGRRRWRGRLLLA 146

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           S     L        D++ ++       +L A+L+
Sbjct: 147 SPGSVAL--------DVDGVRQEFLLAEILKAKLV 173


>gi|121613126|ref|YP_999862.1| hypothetical protein CJJ81176_0173 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167004833|ref|ZP_02270591.1| hypothetical protein Cjejjejuni_00785 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|166980215|sp|A1VXM1|RIMP_CAMJJ RecName: Full=Ribosome maturation factor rimP
 gi|87250144|gb|EAQ73102.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 140

 Score =  134 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  AR  +
Sbjct: 118 LENKEKT------TINFNDIKKARTFI 138


>gi|329919854|ref|ZP_08276792.1| hypothetical protein HMPREF9210_0185 [Lactobacillus iners SPIN
           1401G]
 gi|328936944|gb|EGG33374.1| hypothetical protein HMPREF9210_0185 [Lactobacillus iners SPIN
           1401G]
          Length = 158

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  L
Sbjct: 5   IDKVIEVITPLVHARGDELVDIEYVKENNQNYLRIYVDREPDGIDIDEIATLSESVSEQL 64

Query: 81  DVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           D+   + +   Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++  
Sbjct: 65  DLINPDPLPDPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDY 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 LE     +    + +I I  + + + R  +
Sbjct: 125 DMDKIILEI----KIKTQQQKITIPRNMIANIRFAI 156


>gi|297588446|ref|ZP_06947089.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
 gi|297573819|gb|EFH92540.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
          Length = 154

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           + P+IE+       +    +    +L  ++E+D+G +++ DCE ++  I+  LD  + I 
Sbjct: 14  LSPLIEDTGIDFYDVEYSNQNGKNILTFYIEKDEGLISIDDCELINNRITDKLDEIDPIS 73

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE++S  I  P  R  DF +  G+VV   +      K++  G +   ++    LE 
Sbjct: 74  DPYYLEIASVDITTPFTRDKDFKKNLGNVVIVNLYQKLDSKKEFKGILKDFNDQEISLEL 133

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIVTD 176
           EK         QI I   ++ S +L + D
Sbjct: 134 EKN--------QIKIERSNISSIKLSLFD 154


>gi|218782564|ref|YP_002433882.1| hypothetical protein Dalk_4736 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763948|gb|ACL06414.1| protein of unknown function DUF150 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 182

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 10/165 (6%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLR 67
           SK   R      +   +  +    +E      V      E    +L+++V+++ G +TL 
Sbjct: 18  SKDRIRRVDADRILEQVRKLTGAALEAEGMDLVLAEFKREGGGYILRLYVDKE-GGITLG 76

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DC  +S+ +  +LD        YRLEVSSPG+DRP+ R+  F R+ G             
Sbjct: 77  DCTMVSRYVGDLLDAYADEMPRYRLEVSSPGLDRPLTREDHFRRFEGRTALIVTKEPREG 136

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++K  G + G       L          +E+ +  +   + SARL
Sbjct: 137 RKKFRGVLSGALNGVITL--------VADEVPMEFALHEIESARL 173


>gi|93004903|ref|YP_579340.1| hypothetical protein Pcryo_0072 [Psychrobacter cryohalolentis K5]
 gi|122416155|sp|Q1QEP7|RIMP_PSYCK RecName: Full=Ribosome maturation factor rimP
 gi|92392581|gb|ABE73856.1| protein of unknown function DUF150 [Psychrobacter cryohalolentis
           K5]
          Length = 166

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 18/167 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVER------DDGNMTLRDCEELSQ 74
             +++++I P +         I    + N  LL+I++E        +  +T+ +C  ++ 
Sbjct: 7   VTELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIENCAAVNH 66

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD----KQK 130
            +S IL+V + I G + LEVSSPG DR          + G  V+  ++ + G+    ++K
Sbjct: 67  QVSGILEVHDPISGEFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEGDKKRRK 126

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
             G +     T   L          +  Q  I+  ++  A LI  D 
Sbjct: 127 ATGTLNSIDATSLKL-------TATDGEQFEIALSNIDKANLIYEDA 166


>gi|86151421|ref|ZP_01069636.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85841768|gb|EAQ59015.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 140

 Score =  134 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  A+  V
Sbjct: 118 LENKEKT------TINFNDIKKAKTFV 138


>gi|312873335|ref|ZP_07733388.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d]
 gi|311091125|gb|EFQ49516.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d]
          Length = 158

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  L
Sbjct: 5   IDKVIEVITPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQL 64

Query: 81  DVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           D+   + +   Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++  
Sbjct: 65  DLINPDPLPDPYILELSSPGVERPIKTEADWCKAKDDYVHVGLYKKINGQKSYEGTLLDY 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 LE     +    + +I I  + + + R  +
Sbjct: 125 DMDKIILEI----KIKTQQQKITIPRNMIANIRFAI 156


>gi|261367203|ref|ZP_05980086.1| hypothetical protein SUBVAR_05255 [Subdoligranulum variabile DSM
           15176]
 gi|282570801|gb|EFB76336.1| hypothetical protein SUBVAR_05255 [Subdoligranulum variabile DSM
           15176]
          Length = 163

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G A  + ++++P +E M  R   +   +E  +  L++ ++RD+  +    CE +S+AI P
Sbjct: 9   GAAKTVETLVRPTVEGMGLRLWDVRFEKEGPDWFLRVLIDRDE-PLDTDTCEAVSRAIDP 67

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMG 137
           ILD  + I+  Y LEV SPG+ R + R   +    G   A  ++      ++ + G + G
Sbjct: 68  ILDEADPIDQSYYLEVGSPGLGRRLTRPEHYEALRGQKCAAHLIRPDEAGRRDVAGILQG 127

Query: 138 TSETG 142
               G
Sbjct: 128 LDGEG 132


>gi|223038669|ref|ZP_03608962.1| conserved hypothetical protein [Campylobacter rectus RM3267]
 gi|222880071|gb|EEF15159.1| conserved hypothetical protein [Campylobacter rectus RM3267]
          Length = 142

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ +I +   +   + +  E    + +I++ +  G + L DCE++S+ +SPI DVE  + 
Sbjct: 4   LENLISQCGVQLYDVEVANENGRAIYRIYIAKP-GGVNLDDCEKVSRLLSPIFDVEPPLS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + + S F+   G +         G+ +KL GKI+   +    LE 
Sbjct: 63  GDYVLEVSSPGLERKLEKPSHFISSVGELAKIS-AEVDGENKKLKGKILSADDDETSLES 121

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E +  K        I   ++  A+  +
Sbjct: 122 EGQILK--------IKIANIKKAKTYI 140


>gi|224543311|ref|ZP_03683850.1| hypothetical protein CATMIT_02511 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523844|gb|EEF92949.1| hypothetical protein CATMIT_02511 [Catenibacterium mitsuokai DSM
           15897]
          Length = 153

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 5/155 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   + P+I         +  ++EK    L++F+E++DGN+ +  C  +S+A+S  
Sbjct: 1   MLEKIKEGLLPIIASFECHLDSMEYVKEKGEWYLRVFIEKNDGNLDMDTCVAVSEAVSEK 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  ++I+  Y LEVSSPGI++P+          G  V  ++         L G +    
Sbjct: 61  LDELDLIKDEYYLEVSSPGIEKPLKTFEQVEAHVGSYVHIDLKNPQNGIDSLEGTLASID 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                ++   +  +     ++ I++D +   RL V
Sbjct: 121 GKELLIQYMVKAVRK----KMTINYDDIKFIRLAV 151


>gi|170017454|ref|YP_001728373.1| YlxS [Leuconostoc citreum KM20]
 gi|259585783|sp|B1MZH7|RIMP_LEUCK RecName: Full=Ribosome maturation factor rimP
 gi|169804311|gb|ACA82929.1| YlxS [Leuconostoc citreum KM20]
          Length = 158

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 14/158 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQAISP 78
           +A +IS++I+P+I         +S  +E    +L+I +++ +   +T+ D    +QA++ 
Sbjct: 5   VAQEISTLIEPLINAQQLLLWDVSYTKEGGQKVLRILIDKRNHEFITMDDITTFTQAVNE 64

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFL--RWNGHVVACEIVLSSGDKQKLIGK 134
           +LD    + I   Y L++SSPG DRP++R   +   + +G  +     ++   ++K  GK
Sbjct: 65  LLDTIEPDPIPEAYMLDISSPGADRPLIRPWHYEWAKASGENILVAFFVAKNGQKKWQGK 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           I    + G  L          +   I  +FD +  A L
Sbjct: 125 IETIDDKGITL--------TTSSETIVCTFDEIAKAVL 154


>gi|297537314|ref|YP_003673083.1| hypothetical protein M301_0118 [Methylotenera sp. 301]
 gi|297256661|gb|ADI28506.1| protein of unknown function DUF150 [Methylotenera sp. 301]
          Length = 161

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 26/166 (15%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-----GNMTLRDCEELSQAIS 77
            D+ ++I+  + ++ +  V +  +  +  LL++F+++ +      ++ + DC  +S  + 
Sbjct: 2   QDLHTLIEKSVSQLGYELVDLE-ISNRGKLLRVFIDKLNPADIKDSVNIDDCSLVSNQLG 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---------- 127
            +L VEN I  + RLEVSSPG+DR + +++DF+R+ G     ++ +   D          
Sbjct: 61  NLLAVENDI-DYDRLEVSSPGMDRVLKKEADFVRFIGERAQIKLRVGIKDESVTATETTL 119

Query: 128 -KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            ++  +G I G  +    +E +    K        ++  ++  ARL
Sbjct: 120 PRKTFLGFIKGVQDGLVLIEFDGVVYK--------MALSNIDKARL 157


>gi|256544695|ref|ZP_05472067.1| hypothetical protein HMPREF0078_0324 [Anaerococcus vaginalis ATCC
           51170]
 gi|256399584|gb|EEU13189.1| hypothetical protein HMPREF0078_0324 [Anaerococcus vaginalis ATCC
           51170]
          Length = 152

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 8/147 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +   ++  I  + +  V I  + E KN +L+ F+ + DG +T+ DCE+ S  +S
Sbjct: 7   MDLISKLKENLESDINGLGYELVDIEFVNEGKNKILRFFIYK-DGGITIDDCEKTSNFLS 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSSP + RP+    D  R    ++  ++     + +K IGKI  
Sbjct: 66  ERLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELLEIKLK----NGEKFIGKIKE 121

Query: 138 TSETG--FFLEKEKRGEKDMNELQIAI 162
             E    F LE E++  +      I I
Sbjct: 122 IKENSLIFTLENEQKEIEKSEIKTIKI 148


>gi|251783185|ref|YP_002997490.1| hypothetical protein SDEG_1793 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391817|dbj|BAH82276.1| hypothetical protein SDEG_1793 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 149

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 9/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++  + P I+   +  V +   +   + +L I V+++ G +T+ D  +L+  ISP+LD  
Sbjct: 1   MTKTVAPEIKA-PYELVDVEYDKMGSDYVLSILVDKE-GGITVEDTSDLTDIISPLLDTI 58

Query: 84  --NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEVSSPG++RP+          G  V   +  +    +   G ++     
Sbjct: 59  TPDPFPDQYMLEVSSPGLERPLKTVESLKAAVGSYVNVSLYKAIDKVKVFQGDLLAFDGE 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++   +         + I + ++  ARL V
Sbjct: 119 TLTIDYLDKTRHK----TVDIPYQTVAKARLAV 147


>gi|239617902|ref|YP_002941224.1| protein of unknown function DUF150 [Kosmotoga olearia TBF 19.5.1]
 gi|239506733|gb|ACR80220.1| protein of unknown function DUF150 [Kosmotoga olearia TBF 19.5.1]
          Length = 167

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 73/159 (45%), Gaps = 7/159 (4%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQA 75
           G   L   +  + + V EE+ +   +++  + +   +L + ++++DG +++ DCE  S+A
Sbjct: 13  GMYELTEKLRKLAEEVAEELGYEIYKLTFGKGRRRAVLTVAIDKEDGYISISDCENFSRA 72

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
               LD   II   Y L + SPG +R + +  DF+R+ G  V   +     ++  L+G++
Sbjct: 73  FEKKLDETEIISSSYNLVIESPGAERELRKPGDFMRFTGKSVKIVLKEPLENRSVLVGQL 132

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +  +E    + +              + +  +  A L +
Sbjct: 133 INANEDLVTIIEADSNR------TFEVEYRMIKKANLRL 165


>gi|224419195|ref|ZP_03657201.1| hypothetical protein HcanM9_07971 [Helicobacter canadensis MIT
           98-5491]
 gi|253828125|ref|ZP_04871010.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313142699|ref|ZP_07804892.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253511531|gb|EES90190.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131730|gb|EFR49347.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 143

 Score =  132 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 17/153 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M ++ D+ + IQ ++E    +   I  L+E  N +L+IFV +   +++L DC+E+S A+S
Sbjct: 1   MLISQDLQTKIQKLVESFDCKLYDIVTLKENDNQILRIFVTKKS-SVSLDDCQEISLALS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDVE      Y LEVSSPGI+R +  K  +    G ++  +       K++  GK++ 
Sbjct: 60  PLLDVEIPESKSYFLEVSSPGIERTLKTKEHYCDAIGELLKVKTFA----KEEFKGKLLA 115

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            +     LE             I I  DS+  A
Sbjct: 116 VNSDNLELEN-----------NIIIPLDSIKKA 137


>gi|325142813|gb|EGC65184.1| hypothetical protein NMB9615945_0622 [Neisseria meningitidis
           961-5945]
          Length = 109

 Score =  132 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G +T+ DC  +S  +S +  VE+I   +  LE+SSPG+DRP+ + +DF+R+ G     +
Sbjct: 2   EGGITVEDCATVSNHLSRVFMVEDI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIK 59

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             L    ++  IGKI G       +  + +         + I   ++  ARL
Sbjct: 60  TRLPIDGQKNFIGKIEGCENDTVTISFDGK--------TVQIELGNIDKARL 103


>gi|259585828|sp|B8FCY3|RIMP_DESAA RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  132 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 10/151 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +    +E      V      E    +L+++V+++ G +TL DC  +S+ +  +LD
Sbjct: 2   EQVRKLTGAALEAEGMDLVLAEFKREGGGYILRLYVDKE-GGITLGDCTMVSRYVGDLLD 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
                   YRLEVSSPG+DRP+ R+  F R+ G             ++K  G + G    
Sbjct: 61  AYADEMPRYRLEVSSPGLDRPLTREDHFRRFEGRTALIVTKEPREGRKKFRGVLSGALNG 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              L          +E+ +  +   + SARL
Sbjct: 121 VITL--------VADEVPMEFALHEIESARL 143


>gi|257439269|ref|ZP_05615024.1| protein associated with NUS operon [Faecalibacterium prausnitzii
           A2-165]
 gi|257198311|gb|EEU96595.1| protein associated with NUS operon [Faecalibacterium prausnitzii
           A2-165]
          Length = 163

 Score =  132 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 11/161 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRD-CEELSQAISPI 79
           A  + ++++P +E M  R   +   +E  +  L++ +++ DG     D C ++S A+ PI
Sbjct: 10  AQRVEALVRPTVEGMGLRLWDVVFEKEGPDWYLRVLIDKTDGTTMDTDTCADVSHALDPI 69

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK-QKLIGKIMGT 138
           LD  + IE  Y LEV SPG+ R + R   +    G  V+  +  ++ +  ++  G +   
Sbjct: 70  LDEADPIEQSYYLEVGSPGLGRKLTRPEHYEAVQGQKVSVRLYRANENGVKEFSGLLTSR 129

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
                 LE             +     ++ + RL   ++L 
Sbjct: 130 EGNTITLE--------GPAGPMQFELSAVSTVRLCDDEDLF 162


>gi|299067339|emb|CBJ38536.1| conserved protein of unknown function [Ralstonia solanacearum
           CMR15]
          Length = 149

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 36  MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
           M +  V++      + LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVS
Sbjct: 1   MGYELVEVE--RAPDGLLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--NYERLEVS 56

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE----TGFFLEKEKRG 151
           SPG+DRP+    DF R+ G  V   + L    ++   G +   +         LE E + 
Sbjct: 57  SPGLDRPLRTLVDFTRFAGLEVKVTLRLPVNGQKNFTGIVQAPAGEPGQERIGLEFEGKD 116

Query: 152 EKDMNELQIAISFDSLLSARLI 173
                   +  +   L  ARL+
Sbjct: 117 ----GPALLEFTLSELDRARLV 134


>gi|300813715|ref|ZP_07094035.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512172|gb|EFK39352.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 153

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            I  + Q   EE+ +  V I   +  K+ LL IF+ + +G + L DC ++S  I   LD 
Sbjct: 9   QIFKIAQVSAEELGYEIVDIEYQKGNKHDLLSIFIFKKEG-IDLDDCTKMSHNIEKNLDN 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
             I+   Y LE+SSPG+DRP+  K D+ R   + V  ++      K++ +G +   +E  
Sbjct: 68  LEILTRPYYLEISSPGLDRPIKTKDDYRRNLENEVEVKLYGPYNGKKEYVGILKDYNEHN 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +  E           I I   ++ S + ++
Sbjct: 128 VIICVEND--------NIEIPIKNISSMKQVI 151


>gi|260654722|ref|ZP_05860210.1| hypothetical protein GCWU000246_00656 [Jonquetella anthropi E3_33
           E1]
 gi|260630437|gb|EEX48631.1| hypothetical protein GCWU000246_00656 [Jonquetella anthropi E3_33
           E1]
          Length = 173

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 8/155 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
             L G+++++++PV+ E+ +R   + L E  ++ +++F++  +G +T  DCE +S+AI P
Sbjct: 6   PALRGELTALLKPVVVELGYRWEGLQLEEIGSMTVRVFIDGPNG-VTADDCEVVSKAIDP 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +L+        Y LEVSSPG++R +    D+ R+ G              ++L G +   
Sbjct: 65  LLEGAMADSNRYYLEVSSPGLERFLFELDDYRRFIGETARIRFHGEGSHIKRLTGVVEAV 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            E       E R      E   AI F+ ++   L+
Sbjct: 125 DE-------EGRVTIHTEEETAAIPFEDIVEGSLV 152


>gi|282882028|ref|ZP_06290669.1| conserved hypothetical protein [Peptoniphilus lacrimalis 315-B]
 gi|281298058|gb|EFA90513.1| conserved hypothetical protein [Peptoniphilus lacrimalis 315-B]
          Length = 153

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            I  + Q   EE+ +  V I   +  K+ LL IF+ + +G + L DC  +S  I   LD 
Sbjct: 9   QIFKIAQVSAEELGYEIVDIEYQKGNKHDLLSIFIFKKEG-IDLDDCTMMSHNIEKNLDN 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
             I+   Y LE+SSPG+DRP+  K D+ R   + V  ++      K++ +G +   +E  
Sbjct: 68  LEILSRPYYLEISSPGLDRPIKTKDDYRRNLENEVEVKLYGPYNGKKEYVGILKDYNEHN 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +  E           I I   ++ S + ++
Sbjct: 128 VIICVEND--------NIEIPIKNISSMKQVI 151


>gi|319944111|ref|ZP_08018389.1| hypothetical protein HMPREF0551_1236 [Lautropia mirabilis ATCC
           51599]
 gi|319742605|gb|EFV95014.1| hypothetical protein HMPREF0551_1236 [Lautropia mirabilis ATCC
           51599]
          Length = 208

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 6/114 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD--GNMTLRDCEELSQAISPILDVENI 85
           ++ PV+  M +  V +  +     LL+I +E  D    +TL DCE +S+ +S +  VE++
Sbjct: 1   MVDPVVSGMGYEVVDVEFVAGG--LLRITIENVDHAQPITLDDCERVSEQLSHLFLVEDV 58

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
              + RLE+SSPG+DR + R  DF R+ G  V   + +    ++   G ++   
Sbjct: 59  --DYDRLEISSPGLDRRLRRPQDFARFTGDEVKLWLRMPQDGRRTFEGVLLSAE 110


>gi|148926309|ref|ZP_01809993.1| hypothetical protein Cj8486_0133 [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145844701|gb|EDK21806.1| hypothetical protein Cj8486_0133 [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 140

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V         +K+K+  KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKIEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  AR  +
Sbjct: 118 LENKEKT------TINFNDIKKARTFI 138


>gi|56807386|ref|ZP_00365365.1| COG0779: Uncharacterized protein conserved in bacteria
           [Streptococcus pyogenes M49 591]
          Length = 162

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V+++ G +T+ D  +L+ 
Sbjct: 5   IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDKE-GGITVEDTSDLTN 62

Query: 75  AISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD  +       Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 63  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 122

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +    +    + I + ++   R+ V
Sbjct: 123 GDLLAFDGETLTIDYLDKTRHKI----VNIPYQAVAKVRMAV 160


>gi|242309141|ref|ZP_04808296.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239524182|gb|EEQ64048.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 143

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 17/153 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M ++ ++ + IQ ++E    +   I+ L+E  N +L+I + +   +++L DC+E+S A+S
Sbjct: 1   MLISQELQAKIQKLVESFGCKIYDITTLKENENQILRISITKKP-SVSLDDCQEVSLALS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDVE      Y LEVSSPGI+RP+  K  F    G ++  + +          GK++ 
Sbjct: 60  PLLDVEIPNFEKYYLEVSSPGIERPLKTKEHFEDAIGELIKIKTISKQD----FKGKLIA 115

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
             +    LE  +            I    +  A
Sbjct: 116 IDDESLKLESGEI-----------IPISEIKKA 137


>gi|42523052|ref|NP_968432.1| hypothetical protein Bd1545 [Bdellovibrio bacteriovorus HD100]
 gi|51316637|sp|Q6MMS8|RIMP_BDEBA RecName: Full=Ribosome maturation factor rimP
 gi|39575257|emb|CAE79425.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 174

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 22/165 (13%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDD-GNMTLRDCEELSQAISPIL 80
             +  +   V          I  +   K   L++F++R++ G +++ DC  +S+ +S IL
Sbjct: 9   AKVEKIANDVAAAQGCVLYDIEFVGLGKGRTLRLFIDREEEGAISIEDCTNVSRGLSEIL 68

Query: 81  D--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG----------DK 128
           D   E I  G Y LEVS+PG+DR + +   F +  G  V  +   +            + 
Sbjct: 69  DADEEMIPGGEYNLEVSTPGLDRHLKKPWHFKKAIGKKVYIKTTKALESVGVEDKKWKNA 128

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           + +   +    E G            + +++I I +  +  A+L+
Sbjct: 129 KTVEEVLESADEQGV--------RFVVKDVEIKIPYAMIDRAKLV 165


>gi|255321999|ref|ZP_05363149.1| conserved hypothetical protein [Campylobacter showae RM3277]
 gi|255301103|gb|EET80370.1| conserved hypothetical protein [Campylobacter showae RM3277]
          Length = 142

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 11/147 (7%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ +I +   +   + +  E    + +I++ +  G + L DCE++S+ +SPI DVE  + 
Sbjct: 4   LENLISQCGVQLYDVEVANENGRAIYRIYIAKP-GGVNLDDCEKVSRILSPIFDVEPPLT 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + + S F+   G +         G+ +KL GKI+   +     E 
Sbjct: 63  GDYVLEVSSPGLERKLEKPSHFILSIGELAKIS-AEVDGENKKLKGKILSADDEEISFES 121

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E +  K        I   ++  A+  +
Sbjct: 122 EGQILK--------IKIANIKKAKTYI 140


>gi|322436507|ref|YP_004218719.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX9]
 gi|321164234|gb|ADW69939.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX9]
          Length = 207

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 48/200 (24%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVER--------------------- 59
              I +  + V        V +          L++F+E+                     
Sbjct: 5   IDTIRATAERVAASHHLEVVDVEFSGGAKFRSLRVFIEKDAESRAKLAAQLTAAQEASDS 64

Query: 60  ----------DDG-------NMTLRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDR 101
                       G        +T  DC + ++    +LDVE+ I G  Y LEVSSPG++R
Sbjct: 65  VEVGFELPVLPSGVPVESLSGVTHEDCADFARDFGTVLDVEDTIPGAEYTLEVSSPGLER 124

Query: 102 PMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL--------EKEKRGEK 153
            + + +DF R++G ++  +   +    +   G++ G +     +        +K K  + 
Sbjct: 125 KLAKPADFARFSGFLIKLQTFTAVDGNRHFQGRLTGFNPEAQTIALDPSAVKQKGKSKKS 184

Query: 154 DMNELQIAISFDSLLSARLI 173
                 + I+F ++  A LI
Sbjct: 185 AAAPQPVEIAFQNVEKANLI 204


>gi|323466336|gb|ADX70023.1| Ribosome maturation factor rimP [Lactobacillus helveticus H10]
          Length = 172

 Score =  131 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 11/162 (6%)

Query: 20  GLAGDISSVIQPVIE----EMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                +  + +PV+E    E     V +  ++EK    L+I+V+R    + + +   LS+
Sbjct: 13  NFLSKVVDLARPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSE 72

Query: 75  AISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            +S  LD  +   +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   
Sbjct: 73  LVSEKLDTIDPDPLPDPYVLELSSPGAERPIKTEADWKRALNDYVHIGLYQKIDDKKVYE 132

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G +   +     LE + +  +     ++ I    +   R  +
Sbjct: 133 GTLKYYNNDEIVLEVKDKTRRK----KLTIPRKLIAKIRFAI 170


>gi|317490694|ref|ZP_07949160.1| hypothetical protein HMPREF1023_02860 [Eggerthella sp. 1_3_56FAA]
 gi|316910225|gb|EFV31868.1| hypothetical protein HMPREF1023_02860 [Eggerthella sp. 1_3_56FAA]
          Length = 159

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 11/152 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +   + P  E+     V + +   K    +++ ++  DG ++  +       I+ ++
Sbjct: 6   EQQLLDALAPRAEQEGVEIVTVEVAGAKKAPTIRVCIDTPDG-VSFDELSSAQAWINDLM 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  +   G Y LEVSSPGIDRP+     F R+ G     +       +    G I     
Sbjct: 65  DELDPFPGAYTLEVSSPGIDRPLRTAEHFARFVGDTAVLKT-QPVDGRGSWTGAIASVEG 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L        D++  +  I  D++  A L
Sbjct: 124 DVVVL--------DVDGAEARIPMDTIKRAHL 147


>gi|319941975|ref|ZP_08016296.1| ribosome maturation factor rimP [Sutterella wadsworthensis 3_1_45B]
 gi|319804628|gb|EFW01498.1| ribosome maturation factor rimP [Sutterella wadsworthensis 3_1_45B]
          Length = 186

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 32/184 (17%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-DGNMTLRDCEELSQAIS 77
           M  +G +S++++  +E + +  V +  L+    L+++ ++ + DG ++L DCE +S  ++
Sbjct: 1   MNSSGALSALVKKTVEGLGYELVDVERLQRG--LVRVTIDIERDGGISLEDCERVSDQLT 58

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-------DKQK 130
            +  VE++   + RLEVSSPG++RP+ R  D+ R+ G +   E+             ++K
Sbjct: 59  HLFTVEDV--SYERLEVSSPGVERPLKRARDWERFTGELAWVELFAPLKAEGFPEAGRRK 116

Query: 131 LIGKIMGTSETG--------------------FFLEKEKRGEKDMNELQIAISFDSLLSA 170
           L G+I+G S                         L   K+   +   +++      +  A
Sbjct: 117 LEGRIVGISGESGAEQIEFDYFEVDIARTPRAAALRARKKQTVEAAPVRVVFPLSEVEQA 176

Query: 171 RLIV 174
            L+V
Sbjct: 177 HLLV 180


>gi|94986975|ref|YP_594908.1| transcription elongation factor [Lawsonia intracellularis
           PHE/MN1-00]
 gi|167013025|sp|Q1MQZ0|RIMP_LAWIP RecName: Full=Ribosome maturation factor rimP
 gi|94731224|emb|CAJ54587.1| transcription elongation factor [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 196

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 17/171 (9%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMT 65
            L   I+ +I P+I     +   I L+     +++IFV+                   +T
Sbjct: 5   ALIETITQLISPLITAQGLKLWGIELINIPQPIIKIFVDTIETNRLHENNIINSKSEQIT 64

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           +  C  LS+ I   L+VE +    + LEVSSPG++R          +  H +   +    
Sbjct: 65  IEQCASLSRLIGLTLEVEELFPNKWTLEVSSPGLERSFFTIQQLSNYINHDIDVTLKEQH 124

Query: 126 ---GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +++K  G ++  ++  F L       K      ++I++  +  A L+
Sbjct: 125 PLWPNRKKFYGTLISITDNTFMLNLSLAHRKSDEPENVSINWQQVRKATLV 175


>gi|154174423|ref|YP_001408783.1| hypothetical protein CCV52592_0357 [Campylobacter curvus 525.92]
 gi|259585735|sp|A7GZZ1|RIMP_CAMC5 RecName: Full=Ribosome maturation factor rimP
 gi|112802245|gb|EAT99589.1| protein conserved hypothetical protein [Campylobacter curvus
           525.92]
          Length = 138

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +  +++E         +  E    + +I++ + +G ++L DCE++S+ +SPI DVE  I 
Sbjct: 4   LNELVKECGVELYDTEIANENGRAIYRIYITK-NGGVSLDDCEKVSRLLSPIFDVEPPIS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R +     F    G +V  +   +     K  G+++   +    LE 
Sbjct: 63  GDYNLEVSSPGLERKLSEARHFKASLGELVKAQTAEA-----KFAGRLVKADDESIALEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           +        E    I    +  A+  +
Sbjct: 118 D--------EGVFEIKIGDIKKAKTYL 136


>gi|187251075|ref|YP_001875557.1| hypothetical protein Emin_0665 [Elusimicrobium minutum Pei191]
 gi|259585767|sp|B2KC93|RIMP_ELUMP RecName: Full=Ribosome maturation factor rimP
 gi|186971235|gb|ACC98220.1| Uncharacterized protein conserved in bacteria [Elusimicrobium
           minutum Pei191]
          Length = 152

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 10/155 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAIS 77
           M     I SV+   +    +  V + +  + +  L Q FV+++ G + L D E+ S+ I 
Sbjct: 1   MRDIKAIESVVADGLANQGYEVVDLIVQNQGSKKLFQFFVDKE-GGINLDDVEKASRLID 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            I+++EN+IEG Y LE SSPGI R + +   F ++ G      +     ++    G I G
Sbjct: 60  SIIEMENLIEGAYILEASSPGIKRVLKKPEHFKKFIGQRAKITLKQMIENRANFTGLIAG 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +ET   L+            Q    ++ +  A L
Sbjct: 120 ANETEMTLDD--------GTTQFKFKYEDIKKANL 146


>gi|251772258|gb|EES52828.1| conserved protein of unknown function [Leptospirillum
           ferrodiazotrophum]
          Length = 171

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 76/148 (51%), Gaps = 5/148 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +  ++  I  +++ M      + L ++   +L++FV+  +G +T+   E +S+ +S +LD
Sbjct: 10  SERLTEEITLLLDSMGLTLYDLVLPKKSGGVLRVFVDGPEG-VTIDQIESVSRRVSVLLD 68

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           V +   G Y LEVSSPG+DR +    D  +  G  V+ ++V +   ++ L G+I    + 
Sbjct: 69  VLDPFPGRYHLEVSSPGLDRLLKIPEDLRKNEGKWVSLKLVDAIEGQKVLKGRIGSVGDA 128

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLS 169
           GFFL  +   +  +    + + F  L S
Sbjct: 129 GFFLHVDAGKKSRI----LEVPFLQLRS 152


>gi|260101366|ref|ZP_05751603.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|260084818|gb|EEW68938.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
          Length = 172

 Score =  130 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 11/162 (6%)

Query: 20  GLAGDISSVIQPVIE----EMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                +  +++PVIE    E     V +  ++EK    L+I+V+R    + + +   LS+
Sbjct: 13  NFLSKVVDLVRPVIETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSE 72

Query: 75  AISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            +S  LD  +   +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   
Sbjct: 73  LVSEKLDTIDPDPLPDPYVLELSSPGAERPITTEADWKRALNDYVHIGLYQKIDDKKVYE 132

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G +   +     LE + +  +     ++ I    +   R  +
Sbjct: 133 GTLKYYNNDEIVLEVKDKTRRK----KLTIPRKLIAKIRFAI 170


>gi|257126085|ref|YP_003164199.1| hypothetical protein Lebu_1320 [Leptotrichia buccalis C-1013-b]
 gi|257050024|gb|ACV39208.1| protein of unknown function DUF150 [Leptotrichia buccalis C-1013-b]
          Length = 163

 Score =  130 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDG-NMTLRDCEELSQAISP 78
           +  +    I+  ++EM      +  + +     L+++VE++DG   TL DC + S+ I  
Sbjct: 4   ILNEFEKRIELHLKEMKLELADLEYVRDGGYNYLRVYVEKEDGSTTTLDDCIDFSREIDG 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           + D  ++I+  + LEVS+PG++R + +  DFLR+ G  +  +   +    +K +GK+   
Sbjct: 64  VAD--DLIDEKFFLEVSTPGVERRLKKPKDFLRFLGEKINVQAKSNIDGAKKFLGKLEKF 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                FL  E  G+       + I    L  A LI
Sbjct: 122 ENDTIFLLDENLGKV------VEIPLLKLKKANLI 150


>gi|153952308|ref|YP_001397397.1| hypothetical protein JJD26997_0151 [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|166979754|sp|A7H1L7|RIMP_CAMJD RecName: Full=Ribosome maturation factor rimP
 gi|152939754|gb|ABS44495.1| protein Tmden_0678 [Campylobacter jejuni subsp. doylei 269.97]
          Length = 140

 Score =  130 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 12/144 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAELSFYDDELVSENGKKIYRIYVQKE-GGVNLDDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +V         +K+K+  KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKIEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
            +  EK        I+F+ +  AR
Sbjct: 118 LENKEKT------TINFNDIKKAR 135


>gi|308182570|ref|YP_003926697.1| Ribosome maturation factor rimP [Helicobacter pylori PeCan4]
 gi|308064755|gb|ADO06647.1| Ribosome maturation factor rimP [Helicobacter pylori PeCan4]
          Length = 146

 Score =  130 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIESVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSVDFELEDHAIKSVEYKDL 137


>gi|86149726|ref|ZP_01067956.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|205356511|ref|ZP_03223275.1| hypothetical protein Cj8421_0138 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|85839994|gb|EAQ57253.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|205345698|gb|EDZ32337.1| hypothetical protein Cj8421_0138 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 140

 Score =  130 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I+V+++ G + L DC +LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAELSFYDDELVSENGKKIYRIYVQKE-GGVNLDDCAKLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + +   F +  G +          +K+K+  KI+   +    LE 
Sbjct: 62  GEYFLEVSSPGLERKLSKIEHFAKSIGELAKITT----NEKEKIEAKIIAVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            +  EK        I+F+ +  AR  +
Sbjct: 118 LENKEKT------TINFNDIKKARTFI 138


>gi|158334114|ref|YP_001515286.1| hypothetical protein AM1_0930 [Acaryochloris marina MBIC11017]
 gi|259585654|sp|B0BZP6|RIMP_ACAM1 RecName: Full=Ribosome maturation factor rimP
 gi|158304355|gb|ABW25972.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 150

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +  PV  + +   V       +   +L++ +   D +  L DCE++S+A+  +
Sbjct: 1   MIPKVIDLAAPVAAQFNLEVVGAVFQTNQSPPVLRVDIRNCDADTGLEDCEKMSRALEAV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD +++    Y LE+SSPG+   +    DF+ + G  V  +         + IG + G  
Sbjct: 61  LDEDDVFPEAYVLEISSPGLSTLLTCDRDFVSFRGFPVLVQTHQPYRGHHQWIGNLTGRD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           E    L ++ R  K   E  + +    
Sbjct: 121 EKFVQLNQKGRPIKIPREEILQVQLHD 147


>gi|227892602|ref|ZP_04010407.1| protein of hypothetical function DUF150 [Lactobacillus ultunensis
           DSM 16047]
 gi|227865587|gb|EEJ73008.1| protein of hypothetical function DUF150 [Lactobacillus ultunensis
           DSM 16047]
          Length = 172

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 11/159 (6%)

Query: 23  GDISSVIQPVIE----EMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +  +++PV+E    E     V +  + EK    L+I+V+R+   + + +   LS+ +S
Sbjct: 16  SKVIDLVRPVVESIIDEHGDMLVDMEYVTEKGKKYLRIYVDREPDGIDIDEIAALSELVS 75

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG +RP+   +D+ R     +   +     DK+   G +
Sbjct: 76  EKLDSLNPDPFPEPYVLELSSPGAERPIKTAADWKRALNDYIHIGLYQKVEDKKVYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++    LE + +  +      + +    + + R  +
Sbjct: 136 KSYNDDEIVLEIKDKTRRK----TLTVPRKLIANVRFAI 170


>gi|312872031|ref|ZP_07732109.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1]
 gi|311092444|gb|EFQ50810.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1]
          Length = 148

 Score =  130 bits (328), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 69/147 (46%), Gaps = 7/147 (4%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+   + + 
Sbjct: 4   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 63

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE 
Sbjct: 64  DPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI 123

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
               +    + +IAI  + + + R  +
Sbjct: 124 ----KIKTQQKKIAIPRNMIANIRFAI 146


>gi|309775436|ref|ZP_07670439.1| 15 kDa protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916825|gb|EFP62562.1| 15 kDa protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 183

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  +I P++ E       ++   E    +LQ+ +   DG+M +  C   S+ IS
Sbjct: 29  MDQIEKLKKLITPLVAEDGIVLYDVAWHTEGKMRILQVSIMHKDGSMDIDTCAAQSEKIS 88

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD  ++I   Y LEV SPG +R +  +       G  V  ++        ++ G +  
Sbjct: 89  AMLDELDLISSEYFLEVCSPGAERELKSEDQIKDAIGEFVYVKLKNPKAGMDEIKGTLTA 148

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +L+   +  K   E    I  D++   RL V
Sbjct: 149 FENHTVYLDYMAKAVKKKAE----IEMDNIALIRLSV 181


>gi|57505608|ref|ZP_00371535.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
 gi|57016155|gb|EAL52942.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
          Length = 138

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 14/147 (9%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + EE         L+ E    + +I++ ++ G ++L DC  LS+ +SPI DVE  + 
Sbjct: 3   LKALCEEAGVELYDSELVSENGKKIYRIYIMKE-GGVSLEDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSS G++R +     F +  G ++         +K+K+ GK++       FL+ 
Sbjct: 62  GEYFLEVSSAGLERKLSTLEHFEKSVGEMLKITTS----EKEKIQGKLLKVEGENIFLQD 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           EK         +I I F  +  A+  +
Sbjct: 118 EK--------AEICIEFSQVKKAKTFI 136


>gi|109947687|ref|YP_664915.1| hypothetical protein Hac_1157 [Helicobacter acinonychis str.
           Sheeba]
 gi|122973267|sp|Q17WR0|RIMP_HELAH RecName: Full=Ribosome maturation factor rimP
 gi|109714908|emb|CAJ99916.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 146

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L +C+++S+ ISP+
Sbjct: 1   MTKRIEERIEGVIESLGYLLYDVSLIKESEQHILRVSLKNPNGAVSLDNCQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + ++  Y LEVSS G++R +     F    G  VA +++    +KQ     +   +
Sbjct: 61  LDVCDFLKDAYILEVSSMGLERTLKTPKHFKLSLGEKVAVKLM----NKQSFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSVDFELENHTIKSVEYKDL 137


>gi|312871843|ref|ZP_07731928.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a]
 gi|311092624|gb|EFQ50983.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a]
          Length = 146

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 69/148 (46%), Gaps = 7/148 (4%)

Query: 30  QPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE--NII 86
            P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+   + +
Sbjct: 1   TPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPL 60

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE
Sbjct: 61  PDPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILE 120

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLIV 174
                +    + +IAI  + + + R  +
Sbjct: 121 I----KIKTQQKKIAIPRNMIANIRFAI 144


>gi|269120927|ref|YP_003309104.1| hypothetical protein Sterm_2319 [Sebaldella termitidis ATCC 33386]
 gi|268614805|gb|ACZ09173.1| protein of unknown function DUF150 [Sebaldella termitidis ATCC
           33386]
          Length = 157

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 11/151 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I   I   ++EM+     +  + E     L+I++ER DG  ++ DC   S+ I P++  
Sbjct: 7   EIEKTIASYLDEMNLELADLEYVPEGGYNYLRIYIERVDGVTSIEDCVSFSEKIDPLI-- 64

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I+  + LEVS+PGI+R + ++ DFLR+ G  +   +     DK+ L G ++      
Sbjct: 65  EDFIKDKFFLEVSTPGIERRLRKEKDFLRFKGKKIRLALKSKVNDKKVLTGDLVDFISNE 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             ++ E           I I  + +  A LI
Sbjct: 125 VVVDVEG--------TLINIPLEKVKKANLI 147


>gi|50914807|ref|YP_060779.1| hypothetical protein M6_Spy1461 [Streptococcus pyogenes MGAS10394]
 gi|71904118|ref|YP_280921.1| hypothetical protein M28_Spy1456 [Streptococcus pyogenes MGAS6180]
 gi|71911226|ref|YP_282776.1| hypothetical protein M5005_Spy_1413 [Streptococcus pyogenes
           MGAS5005]
 gi|94989045|ref|YP_597146.1| hypothetical protein MGAS9429_Spy1415 [Streptococcus pyogenes
           MGAS9429]
 gi|94991043|ref|YP_599143.1| hypothetical protein MGAS10270_Spy1534 [Streptococcus pyogenes
           MGAS10270]
 gi|94992936|ref|YP_601035.1| hypothetical protein MGAS2096_Spy1439 [Streptococcus pyogenes
           MGAS2096]
 gi|209559842|ref|YP_002286314.1| hypothetical protein Spy49_1341c [Streptococcus pyogenes NZ131]
 gi|34223094|sp|P59819|RIMP_STRP1 RecName: Full=Ribosome maturation factor rimP
 gi|73921027|sp|Q5XAG7|RIMP_STRP6 RecName: Full=Ribosome maturation factor rimP
 gi|91208006|sp|Q48RU4|RIMP_STRPM RecName: Full=Ribosome maturation factor rimP
 gi|166979769|sp|Q1JFG0|RIMP_STRPD RecName: Full=Ribosome maturation factor rimP
 gi|166979847|sp|Q1JAB7|RIMP_STRPB RecName: Full=Ribosome maturation factor rimP
 gi|166979918|sp|Q1JKG7|RIMP_STRPC RecName: Full=Ribosome maturation factor rimP
 gi|226695935|sp|B5XHV7|RIMP_STRPZ RecName: Full=Ribosome maturation factor rimP
 gi|50903881|gb|AAT87596.1| Hypothetical cytosolic protein [Streptococcus pyogenes MGAS10394]
 gi|71803213|gb|AAX72566.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS6180]
 gi|71854008|gb|AAZ52031.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS5005]
 gi|94542553|gb|ABF32602.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
 gi|94544551|gb|ABF34599.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
 gi|94546444|gb|ABF36491.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
 gi|209541043|gb|ACI61619.1| transcription termination protein NusA-like protein [Streptococcus
           pyogenes NZ131]
          Length = 178

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V+++ G +T+ D  +L+ 
Sbjct: 21  IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDKE-GGITVEDTSDLTN 78

Query: 75  AISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD  +       Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 79  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +    +    + I + ++   R+ V
Sbjct: 139 GDLLAFDGETLTIDYLDKTRHKI----VNIPYQAVAKVRMAV 176


>gi|315639113|ref|ZP_07894280.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
 gi|315480817|gb|EFU71454.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
          Length = 139

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 14/147 (9%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I++ ++ G ++L DC  LS+ +SPI DVE  + 
Sbjct: 4   LKALCKEAGVELYDSELVSENGKKIYRIYIMKE-GGVSLEDCARLSEILSPIFDVEPPVS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSS G++R +     F +  G ++         +K+K+ GK++       FL+ 
Sbjct: 63  GEYFLEVSSAGLERKLSTLEHFEKSVGEMLKITTS----EKEKIQGKLLKVEGENIFLQD 118

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           EK         +I I F  +  A+  +
Sbjct: 119 EK--------AEICIEFSQVKKAKTFI 137


>gi|291287255|ref|YP_003504071.1| hypothetical protein Dacet_1343 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884415|gb|ADD68115.1| protein of unknown function DUF150 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 169

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 32  VIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENII--EG 88
           V+ E       ++L  E+   +L+I ++++ G   + DC E S+AIS  LD E+ I    
Sbjct: 28  VLSEKGLELFDMTLRSERGGKVLRITIDKETGP-GIEDCTEASRAISAFLDGEDNIVPLD 86

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMGTSETGFFLEK 147
            Y LEVS+PG++RP+  + DF+R  G       V      ++   GKI    ++   L  
Sbjct: 87  KYHLEVSTPGLERPLRSQQDFVRQTGKKCKIITVNKDESGRKSYTGKIDSVDDSKVTLYV 146

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           EK            IS D++  A L+V
Sbjct: 147 EKES------AAFEISLDNISKANLVV 167


>gi|325912470|ref|ZP_08174863.1| hypothetical protein HMPREF0522_0261 [Lactobacillus iners UPII
           143-D]
 gi|325475717|gb|EGC78890.1| hypothetical protein HMPREF0522_0261 [Lactobacillus iners UPII
           143-D]
          Length = 145

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 69/147 (46%), Gaps = 7/147 (4%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+   + + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE 
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI 120

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
               +    + +IAI  + + + R  +
Sbjct: 121 ----KIKTQQQKIAIPRNMIANIRFAI 143


>gi|210134596|ref|YP_002301035.1| hypothetical protein HPP12_0398 [Helicobacter pylori P12]
 gi|226706095|sp|B6JKX7|RIMP_HELP2 RecName: Full=Ribosome maturation factor rimP
 gi|210132564|gb|ACJ07555.1| hypothetical protein HPP12_0398 [Helicobacter pylori P12]
          Length = 146

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E  + +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEHNILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERVLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DWSADFELENHAIKSVEYKDL 137


>gi|21911035|ref|NP_665303.1| hypothetical protein SpyM3_1499 [Streptococcus pyogenes MGAS315]
 gi|34223120|sp|Q8K642|RIMP_STRP3 RecName: Full=Ribosome maturation factor rimP
 gi|21905244|gb|AAM80106.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
          Length = 178

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 69/162 (42%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V+++DG +T+ D  +L+ 
Sbjct: 21  IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDKEDG-ITVEDTSDLTN 78

Query: 75  AISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD  +       Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 79  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +    +    + I + ++   R+ V
Sbjct: 139 GDLLAFDGETLTIDYLDKTRHKI----VNIPYQAVAKVRMAV 176


>gi|157164808|ref|YP_001466379.1| hypothetical protein CCC13826_1497 [Campylobacter concisus 13826]
 gi|259585734|sp|A7ZC71|RIMP_CAMC1 RecName: Full=Ribosome maturation factor rimP
 gi|112801640|gb|EAT98984.1| protein Tmden_0678 [Campylobacter concisus 13826]
          Length = 138

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 15/147 (10%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +  +I E         +  E    + ++++ + DG ++L DCE++S+ +SPI DV   + 
Sbjct: 4   LDKLIRECGVELYDSEIANENGRAIFRVYITK-DGGVSLDDCEKVSRLLSPIFDVTPPVS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + + S F    G +V  +      + +K  G+++   E    +E 
Sbjct: 63  GDYNLEVSSPGLERKLSKPSHFKASVGELVKVQT-----EAEKFAGRLVKADEESIAVEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E        E    I+   +  A+  +
Sbjct: 118 E--------EGIFEINISEIKKAKTYL 136


>gi|217031630|ref|ZP_03437135.1| hypothetical protein HPB128_21g188 [Helicobacter pylori B128]
 gi|298736659|ref|YP_003729185.1| hypothetical protein HPB8_1164 [Helicobacter pylori B8]
 gi|216946830|gb|EEC25426.1| hypothetical protein HPB128_21g188 [Helicobacter pylori B128]
 gi|298355849|emb|CBI66721.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 146

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYTLEVSSMGLERTLKTPKHFKLSLGEKVEVKLI----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K++    +
Sbjct: 117 DLSADFELEDHAIKNVEYKDL 137


>gi|309808386|ref|ZP_07702287.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
 gi|308168371|gb|EFO70488.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
          Length = 145

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 69/147 (46%), Gaps = 7/147 (4%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+   + + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE 
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI 120

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
               +    + +IAI  + + + R  +
Sbjct: 121 ----KIKTQQKKIAIPRNMIANIRFAI 143


>gi|227878820|ref|ZP_03996727.1| protein of hypothetical function DUF150 [Lactobacillus crispatus
           JV-V01]
 gi|227861568|gb|EEJ69180.1| protein of hypothetical function DUF150 [Lactobacillus crispatus
           JV-V01]
          Length = 172

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 71/157 (45%), Gaps = 7/157 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S  
Sbjct: 18  VIDSVRPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVSEK 77

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    + +   Y LE+SSPG +RP+  K+D+ +     +   +     +K+   G +  
Sbjct: 78  LDALDPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIENKKMYEGTLKS 137

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++    LE + +  +      + +    + + R  +
Sbjct: 138 YNDDEVVLEIKDKTRRK----TLTVPRKLIANIRFAI 170


>gi|306826864|ref|ZP_07460164.1| protein of hypothetical function DUF150 [Streptococcus pyogenes
           ATCC 10782]
 gi|34223095|sp|P59820|RIMP_STRP8 RecName: Full=Ribosome maturation factor rimP
 gi|304430882|gb|EFM33891.1| protein of hypothetical function DUF150 [Streptococcus pyogenes
           ATCC 10782]
          Length = 178

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V+++ G +T+ D  +L+ 
Sbjct: 21  IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDKE-GGITVEDTSDLTN 78

Query: 75  AISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD  +       Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 79  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +    +    + I + ++   R+ V
Sbjct: 139 GDLLAFDGETLTIDYLDKTRHKI----VNIPYQAVAKVRMAV 176


>gi|291166363|gb|EFE28409.1| hypothetical protein HMPREF0389_00324 [Filifactor alocis ATCC
           35896]
          Length = 152

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 84/150 (56%), Gaps = 8/150 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  I  +   V++E  +  V +  ++E     L++FV++ DG + + +  ++++ ++ +
Sbjct: 5   IAVQIEELFLSVLDEK-YELVDVEYVKEGAFYYLRVFVDK-DGGLDIDEISDITRVLNKL 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I+  Y LEVS+PG+ R + ++ DF+R +G  +  ++      +++L G ++G  
Sbjct: 63  LDEKDPIQQQYFLEVSTPGLGRALKKERDFIRESGKEIELKLYQPVNGQKELSGVLIGLD 122

Query: 140 ETG-FFLEKEKR----GEKDMNELQIAISF 164
           ETG   ++ E       +KD+  +++ + F
Sbjct: 123 ETGNIVIQSEDEQLCLSKKDIASIKLKVDF 152


>gi|315502522|ref|YP_004081409.1| hypothetical protein ML5_1726 [Micromonospora sp. L5]
 gi|315409141|gb|ADU07258.1| protein of unknown function DUF150 [Micromonospora sp. L5]
          Length = 216

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            +  VI+PV+    +    +S+    +  ++++ V+  DG + L    ++S+A+S  LD 
Sbjct: 42  RLREVIEPVVTAAGYDLEDLSVSRAGRRHVVRVIVD-ADGGINLDGVADVSRAVSAALDA 100

Query: 83  E-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
                 +I+ G Y+LEVSSPG+DRP+     + R  G +V   +   +GD+Q L G+I  
Sbjct: 101 AEEAGGDIVAGEYQLEVSSPGVDRPLTLPRHWRRNAGRLVKVTVRGDAGDRQ-LTGRITA 159

Query: 138 TSETGFFLEKE----KRGEKDMNELQIAISFDSLLS 169
             +    LE +    +    ++   ++ + F+ L  
Sbjct: 160 ADDERVVLETDAGPAEHPYAELGPGRVQVEFNRLDD 195


>gi|160947564|ref|ZP_02094731.1| hypothetical protein PEPMIC_01499 [Parvimonas micra ATCC 33270]
 gi|158446698|gb|EDP23693.1| hypothetical protein PEPMIC_01499 [Parvimonas micra ATCC 33270]
          Length = 154

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 3/151 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAI 76
           +  L   I    + ++ E     V +  ++E K  +L+IF+++ DG + L  CE  S  I
Sbjct: 4   ENELLKTIEKNFKTILLEKGIYFVNVEYVKEPKGNVLRIFIDK-DGGVDLDSCEMTSNII 62

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IE  Y LEVSSPG++R +        + G  V  +      ++++ IG + 
Sbjct: 63  SDWLDEVDPIEDSYFLEVSSPGVEREIKSDEQLKTFIGKKVLVKCYKKINNEKEFIGYLK 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
                   LE   +     +   IAI    +
Sbjct: 123 SFDREKLTLEI-GKSSIIFSRKDIAIIKSQI 152


>gi|207093098|ref|ZP_03240885.1| hypothetical protein HpylHP_09959 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 146

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAVKSVEYKDL 137


>gi|302865965|ref|YP_003834602.1| hypothetical protein Micau_1466 [Micromonospora aurantiaca ATCC
           27029]
 gi|302568824|gb|ADL45026.1| protein of unknown function DUF150 [Micromonospora aurantiaca ATCC
           27029]
          Length = 216

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            +  VI+PV+    +    +S+    +  ++++ V+  DG + L    ++S+A+S  LD 
Sbjct: 42  RLREVIEPVVTAAGYDLEDLSVSRAGRRHVVRVIVD-ADGGINLDGVADVSRAVSAALDA 100

Query: 83  E-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
                 +I+ G Y+LEVSSPG+DRP+     + R  G +V   +   +GD+Q L G+I  
Sbjct: 101 AEEAGGDIVAGEYQLEVSSPGVDRPLTLPRHWRRNAGRLVKVTVRGDAGDRQ-LTGRITA 159

Query: 138 TSETGFFLEKE----KRGEKDMNELQIAISFDSLLS 169
             +    LE +    +    ++   ++ + F+ L  
Sbjct: 160 ADDERVVLETDAGPAEHPYAELGPGRVQVEFNRLDD 195


>gi|317009046|gb|ADU79626.1| Ribosome maturation factor rimP [Helicobacter pylori India7]
          Length = 146

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E R  K +    +
Sbjct: 117 DLSADFELEDRAVKSVEYKDL 137


>gi|307637097|gb|ADN79547.1| transcription termination protein [Helicobacter pylori 908]
 gi|325995688|gb|ADZ51093.1| ribosome maturation factor [Helicobacter pylori 2018]
 gi|325997284|gb|ADZ49492.1| hypothetical protein hp2017_0406 [Helicobacter pylori 2017]
          Length = 146

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYTLEVSSMGLERTLKTPKHFKLSLGEKVEVKLI----NKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|261839249|gb|ACX99014.1| hypothetical protein HPKB_0406 [Helicobacter pylori 52]
          Length = 146

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHATKSVEYKDL 137


>gi|220907501|ref|YP_002482812.1| hypothetical protein Cyan7425_2088 [Cyanothece sp. PCC 7425]
 gi|254801539|sp|B8HUA6|RIMP_CYAP4 RecName: Full=Ribosome maturation factor rimP
 gi|219864112|gb|ACL44451.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7425]
          Length = 154

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +I  +  P+  +++   V           +L++ +     + +L DCE +S  +   
Sbjct: 5   LIPEILDLAVPLAADLNLEVVGAVFHTHLNPPVLRVDIRNLSADTSLEDCERMSHRLETA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  +++ G Y LEVSSPGI R +    +F+ + G  V          +++ +G ++   
Sbjct: 65  LDAADLVAGTYVLEVSSPGISRLLSSDREFVSFRGFSVIVRTREPIAGQREWVGNLVQRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L ++ R         I+I    +   +L
Sbjct: 125 EEFVYLNQKGRA--------ISIPRHLVTQVQL 149


>gi|257063652|ref|YP_003143324.1| hypothetical protein Shel_09340 [Slackia heliotrinireducens DSM
           20476]
 gi|256791305|gb|ACV21975.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
           20476]
          Length = 158

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
             ++ + ++P  ++     V I ++   K   ++++++  +G +T  D       ++ I+
Sbjct: 6   EAELLASLEPRAQQEGMEIVTIEIVGSRKAPTIRVYLDTPEG-VTFDDIAAAQVWVNEIV 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +  +   G Y LEVSSPGIDRP+     F R+ G  V          + +   ++ G  E
Sbjct: 65  EEIDPFPGAYTLEVSSPGIDRPLRTPEHFARFAGEDVYVMTAKPFDGQSRFNAQLNGFDE 124

Query: 141 TG--FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 +  E       +  ++AI+ + +  A +
Sbjct: 125 ESGCVLIGLE-------SGEELAIALNDVKKAHV 151


>gi|227495146|ref|ZP_03925462.1| protein of hypothetical function DUF150 [Actinomyces coleocanis DSM
           15436]
 gi|226831598|gb|EEH63981.1| protein of hypothetical function DUF150 [Actinomyces coleocanis DSM
           15436]
          Length = 168

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 10/165 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELS 73
                +   +   ++PV++        + + E    +++I V+ ++G   ++  D +E+S
Sbjct: 1   MSRTAIEEKVLDCVEPVVKAQGLFLEDVKVSERSETVVRIIVDLEEGTYLVSSDDLQEVS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             IS  LD  + IE  Y LE+S+PG +R +     + R    +V  ++     DK +L G
Sbjct: 61  WKISEALDAADPIEQAYTLEISTPGAERKLHTPRHYRRSLNRLVEIKL----ADKSELRG 116

Query: 134 KIMGTSETGFFLEKE----KRGEKDMNELQIAISFDSLLSARLIV 174
            I    E+   LE+E    K G K      + +SF+++  AR+ V
Sbjct: 117 FIREVGESELTLEEEAKAPKPGMKPKPGKLVTVSFENISKARVRV 161


>gi|154249423|ref|YP_001410248.1| hypothetical protein Fnod_0736 [Fervidobacterium nodosum Rt17-B1]
 gi|259585774|sp|A7HL08|RIMP_FERNB RecName: Full=Ribosome maturation factor rimP
 gi|154153359|gb|ABS60591.1| protein of unknown function DUF150 [Fervidobacterium nodosum
           Rt17-B1]
          Length = 152

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 13/153 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++ +P++  M      +   ++    +L I +++ D  ++ RDCE +S  I  +
Sbjct: 8   IIERVRAIAEPIVTSMGLELFDVKYRIQAGKWVLSIIIDKLDDYVSTRDCELVSYEIEKV 67

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I G Y LEVSSPG+DRP+ +  DF R+ G +V  +            G I+  +
Sbjct: 68  LDSHDFIPGRYYLEVSSPGLDRPLKKIEDFRRFVGKLVKVKTKK------TYRGYIVDVN 121

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                    K     ++   I I +D + SA L
Sbjct: 122 MET------KEIILRVDNENITIKYDDVKSANL 148


>gi|259585814|sp|B5Z6E8|RIMP_HELPG RecName: Full=Ribosome maturation factor rimP
          Length = 146

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|157363141|ref|YP_001469908.1| hypothetical protein Tlet_0274 [Thermotoga lettingae TMO]
 gi|166988603|sp|A8F3W0|RIMP_THELT RecName: Full=Ribosome maturation factor rimP
 gi|157313745|gb|ABV32844.1| protein of unknown function DUF150 [Thermotoga lettingae TMO]
          Length = 152

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 19  MGLAGDISSVIQPVI----EEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELS 73
           M L   I   ++PV+     ++      I+L  E+   +L++ ++  +  +++R CE +S
Sbjct: 1   MILVKKIIDKLRPVVIDILSQLGLELFDITLRRERRKLVLRVVIDDPENYVSIRQCEIVS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             I   LD  ++I+  Y LEVSSPG+DRP+    D+ R+ G +    +     D + L+G
Sbjct: 61  SQIGNYLDEADLIDSSYILEVSSPGLDRPLREMKDYNRFVGRLAKIWLK----DGKVLVG 116

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            I  T+E    +E +       N   I  SFD +   +L
Sbjct: 117 NIKETTENTVSIELK-------NGEIITFSFDQIKKGKL 148


>gi|254382095|ref|ZP_04997457.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194341002|gb|EDX21968.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 170

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 6/154 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++         I + +  K  +L++ V+ D+G + L  C ELS+ IS  L
Sbjct: 6   SDRLRGLLEPLVAAKGLDLEDIEMSKAGKRRMLRVIVDSDEG-VELDTCAELSREISDQL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMGT 138
           D  +++ E  Y LEVSSPG DRP+     ++R  G +V  ++         +L+ +I+  
Sbjct: 65  DESDVMGEDEYVLEVSSPGADRPLTEHRHYVRALGRLVKFQLTAGDDKGAGELVARILDV 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            + G  LE    G K        I+F  +  AR+
Sbjct: 125 DDEGMDLEV--PGVKGRKATARRIAFTDIAKARV 156


>gi|317180703|dbj|BAJ58489.1| hypothetical protein HPF32_0907 [Helicobacter pylori F32]
          Length = 146

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|307067173|ref|YP_003876139.1| hypothetical protein SPAP_0544 [Streptococcus pneumoniae AP200]
 gi|306408710|gb|ADM84137.1| Uncharacterized protein conserved in bacteria [Streptococcus
           pneumoniae AP200]
          Length = 134

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 8/136 (5%)

Query: 42  QISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIEGHYRLEVSSPG 98
            I   +   +++L IFV++ +G +TL D  +L++ ISP+LD    +     Y LE++SPG
Sbjct: 2   DIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPG 60

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNEL 158
           ++RP+  K       G  +   +  +   ++   G ++   E    +E   +  K     
Sbjct: 61  LERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKK---- 116

Query: 159 QIAISFDSLLSARLIV 174
            + I +  +  ARL V
Sbjct: 117 TVQIPYSLVSKARLAV 132


>gi|326316664|ref|YP_004234336.1| ribosome maturation factor rimP [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373500|gb|ADX45769.1| Ribosome maturation factor rimP [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 201

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 41/186 (22%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----------------RDDGNMTLR 67
           +  +++  +  + +  V+I        LL+I ++                   +  +T+ 
Sbjct: 3   LQQIVEQTVAGLGYDLVEIE--RSAGGLLRITIDLPWQPPVEGAASDAAPAGPEAFVTVE 60

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G VV   +    GD
Sbjct: 61  DCEKVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRHEQDFQRFAGEVVDITLKAPIGD 118

Query: 128 ---------KQKLIGKIMGTSETGFFL-----------EKEKRGEKDMNELQIAISFDSL 167
                    ++K  G +  T   G+ +           +K  +         +  + D L
Sbjct: 119 AAAGQVNANRKKFRGTLERTEAGGWQIVWSDEPPPKPGQKVSKKRVPPPLQALGFTLDEL 178

Query: 168 LSARLI 173
             ARL 
Sbjct: 179 RDARLA 184


>gi|139473253|ref|YP_001127968.1| hypothetical protein SpyM50378 [Streptococcus pyogenes str.
           Manfredo]
 gi|166990902|sp|A2RCZ7|RIMP_STRPG RecName: Full=Ribosome maturation factor rimP
 gi|134271499|emb|CAM29720.1| conserved hypothetical protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 178

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V+++ G +T+ D  +L+ 
Sbjct: 21  IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDKE-GGITVEDTSDLTN 78

Query: 75  AISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD  +       Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 79  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +    +    + I +  +   R+ V
Sbjct: 139 GDLLAFDGETLTIDYLDKTRHKI----VNIPYQVVAKVRMAV 176


>gi|332673248|gb|AEE70065.1| conserved hypothetical protein [Helicobacter pylori 83]
          Length = 146

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|317012240|gb|ADU82848.1| Ribosome maturation factor rimP [Helicobacter pylori Lithuania75]
          Length = 146

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G + L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVNLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERVLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|108562826|ref|YP_627142.1| hypothetical protein HPAG1_0401 [Helicobacter pylori HPAG1]
 gi|122386653|sp|Q1CUA4|RIMP_HELPH RecName: Full=Ribosome maturation factor rimP
 gi|107836599|gb|ABF84468.1| hypothetical protein HPAG1_0401 [Helicobacter pylori HPAG1]
          Length = 146

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLI----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVGYKDL 137


>gi|291546818|emb|CBL19926.1| Uncharacterized protein conserved in bacteria [Ruminococcus sp.
           SR1/5]
          Length = 120

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +++ P++E   F  V +  ++E     L+ ++++  G +T+ DCE++S+A S IL
Sbjct: 8   EQKTEAILTPIVESRGFELVDVEYVKEAGTWYLRGYIDKP-GGITVNDCEDVSRAFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKS 107
           D ++ IE  Y +E+SSPG+DRP+ ++ 
Sbjct: 67  DEQDFIEDSYIMEISSPGLDRPLKKEK 93


>gi|317179205|dbj|BAJ56993.1| hypothetical protein HPF30_0896 [Helicobacter pylori F30]
          Length = 146

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E R  K +    +
Sbjct: 117 DLSADFELEDRAIKSVEYKDL 137


>gi|309809702|ref|ZP_07703557.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
 gi|325912543|ref|ZP_08174930.1| hypothetical protein HMPREF0523_0654 [Lactobacillus iners UPII
           60-B]
 gi|308169982|gb|EFO72020.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
 gi|325478152|gb|EGC81277.1| hypothetical protein HMPREF0523_0654 [Lactobacillus iners UPII
           60-B]
          Length = 145

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 68/147 (46%), Gaps = 7/147 (4%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+   + + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE 
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKDDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI 120

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
               +    + +I I  + + + R  +
Sbjct: 121 ----KIKTQQQKITIPRNMIANIRFAI 143


>gi|254779091|ref|YP_003057196.1| hypothetical protein HELPY_0404 [Helicobacter pylori B38]
 gi|254001002|emb|CAX28946.1| Conserved hypothetical protein [Helicobacter pylori B38]
          Length = 146

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +      +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKPT----NKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DWSADFELEDHAIKSVEYKDL 137


>gi|188527211|ref|YP_001909898.1| hypothetical protein HPSH_02090 [Helicobacter pylori Shi470]
 gi|226701161|sp|B2USN6|RIMP_HELPS RecName: Full=Ribosome maturation factor rimP
 gi|188143451|gb|ACD47868.1| hypothetical protein HPSH_02090 [Helicobacter pylori Shi470]
 gi|261837834|gb|ACX97600.1| hypothetical protein KHP_0389 [Helicobacter pylori 51]
 gi|297379622|gb|ADI34509.1| UPF0090 protein [Helicobacter pylori v225d]
 gi|308061753|gb|ADO03641.1| Ribosome maturation factor rimP [Helicobacter pylori Cuz20]
 gi|308063263|gb|ADO05150.1| Ribosome maturation factor rimP [Helicobacter pylori Sat464]
          Length = 146

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|94994922|ref|YP_603020.1| hypothetical protein MGAS10750_Spy1526 [Streptococcus pyogenes
           MGAS10750]
 gi|166979761|sp|Q1J5B0|RIMP_STRPF RecName: Full=Ribosome maturation factor rimP
 gi|94548430|gb|ABF38476.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
          Length = 178

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 67/159 (42%), Gaps = 9/159 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++  + P I+   +  V +   +   + +L I V+++ G +T+ D  +L+  IS
Sbjct: 24  TSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDKE-GGITVEDTSDLTNIIS 81

Query: 78  PILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           P+LD  +       Y LEVSSPG++RP+          G  +   +  +    +   G +
Sbjct: 82  PLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQGDL 141

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++   +    +    + I + ++   R+ V
Sbjct: 142 LAFDGETLTIDYLDKTRHKI----VNIPYQAVAKVRMAV 176


>gi|256851260|ref|ZP_05556649.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260660684|ref|ZP_05861599.1| UPF0090 protein [Lactobacillus jensenii 115-3-CHN]
 gi|282934728|ref|ZP_06339971.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
 gi|256616322|gb|EEU21510.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260548406|gb|EEX24381.1| UPF0090 protein [Lactobacillus jensenii 115-3-CHN]
 gi|281301303|gb|EFA93604.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 158

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 69/159 (43%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P+ E+     V +  ++EKN   L+I+V+R +  + + +   LS+ +S
Sbjct: 2   TKIIDLVTDLVTPLAEKRGDELVDVEYVKEKNQYYLRIYVDRGESGIDIEEIAALSEIVS 61

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ +     +          ++   G +
Sbjct: 62  EELDKLNPDPFTEPYMLELSSPGLERPIKNERDWNKALNKYIHVACYQKIDGQKSFDGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +             + +      ++ I   ++ +AR  +
Sbjct: 122 LSRDNKK----ITLKIKIKTRTKELEIPIGAIANARFAI 156


>gi|269215360|ref|ZP_06159214.1| hypothetical protein HMPREF0762_00005 [Slackia exigua ATCC 700122]
 gi|269131216|gb|EEZ62290.1| hypothetical protein HMPREF0762_00005 [Slackia exigua ATCC 700122]
          Length = 157

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 8/152 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + + ++P   E     V I ++   K   ++++++ + G +   D       I+ IL
Sbjct: 6   EASLLAALEPRAIEEGIEIVTIEVVGSRKAPTIRVYIDTEQG-IVFDDIAAAQAWINEIL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  +   G Y LEVSSPGIDRP+  +  F    G  V          + +  G ++G +E
Sbjct: 65  DEIDPFPGAYTLEVSSPGIDRPLRTRGHFEAAVGEQVYATCSEPVDGRSRFSGTLLGVAE 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G            ++  ++ + F  +  A +
Sbjct: 125 DG------GAIRLSVDGDEVVLPFSIIKRAHI 150


>gi|15611447|ref|NP_223098.1| hypothetical protein jhp0379 [Helicobacter pylori J99]
 gi|6648012|sp|Q9ZM44|RIMP_HELPJ RecName: Full=Ribosome maturation factor rimP
 gi|4154909|gb|AAD05958.1| putative [Helicobacter pylori J99]
          Length = 146

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLI----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E +    K +    +
Sbjct: 117 DLSADFELDNHAIKSVEYKDL 137


>gi|297206127|ref|ZP_06923522.1| protein of hypothetical function DUF150 [Lactobacillus jensenii
           JV-V16]
 gi|297149253|gb|EFH29551.1| protein of hypothetical function DUF150 [Lactobacillus jensenii
           JV-V16]
          Length = 169

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 70/159 (44%), Gaps = 7/159 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P+ E+     V +  ++EKN   L+I+V+R +  + + +   LS+ +S
Sbjct: 13  TKIIDLVTDLVTPLAEKRGDELVDVEYVKEKNQYYLRIYVDRGESGIDIEEIAALSEIVS 72

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ +     +          ++   G +
Sbjct: 73  EELDKLNPDPFTEPYMLELSSPGLERPIKNERDWNKALNKYIHVACYQKIDGQKSFDGTL 132

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +         +   + +      ++ I   ++ +AR  +
Sbjct: 133 LSRDNK----KITLKIKIKTRTKELEIPIGAIANARFAI 167


>gi|313897501|ref|ZP_07831044.1| conserved hypothetical protein [Clostridium sp. HGF2]
 gi|312957871|gb|EFR39496.1| conserved hypothetical protein [Clostridium sp. HGF2]
          Length = 155

 Score =  127 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  +I  ++ E       ++   E +  +LQ+ +   DG+M +  C   S+ IS
Sbjct: 1   MDQIQKLKELITLLVAEDGIELYDVAWHTEGSMRILQVSIMHKDGSMDIDTCAAQSEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD  ++I   Y LEV SPG +R +  +       G  V  ++        ++ G +  
Sbjct: 61  TMLDEMDMIASEYFLEVCSPGAERELKSEEQIRDAIGEFVYVKLKNPRAGMDEIKGTLTA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +L+   +  K   E    I  D++   RL V
Sbjct: 121 FENNTVYLDYMAKAVKKKAE----IEMDNIALIRLSV 153


>gi|302537259|ref|ZP_07289601.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302446154|gb|EFL17970.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 170

 Score =  127 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 6/154 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++         I L +  K  +L+I V+ D+G + L +C ELS+ IS  L
Sbjct: 6   SDRLRGLLEPLVAAKGLDLEDIELSKAGKRRMLRIIVDSDEG-VDLDECAELSREISDRL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV-LSSGDKQKLIGKIMGT 138
           D  +++ E  Y LEVSSPG DRP+  +  ++R  G +V  ++         +LI +I+G 
Sbjct: 65  DESDVMGEDEYNLEVSSPGADRPLSERRHYVRATGRLVKFQLSAEGEKGAGELIARILGV 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            + G  LE    G K        I+F  +  AR+
Sbjct: 125 DDEGMDLEV--PGVKGRKATARRIAFTDVAKARV 156


>gi|206602207|gb|EDZ38689.1| Conserved protein of unknown function [Leptospirillum sp. Group II
           '5-way CG']
          Length = 167

 Score =  127 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M    ++  ++ P    +      + L  +   + ++FV+   G + L   E +S+ IS 
Sbjct: 1   MRFEKELDHILTP----LGLSLHDLVLPGKNGGVFKVFVDHPKG-VGLDQLEAVSRRISD 55

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDV +   G YRLEVSSPG+DR +    D L   G  +  +       ++   G I G+
Sbjct: 56  LLDVLDPFPGKYRLEVSSPGLDRVLRIPEDLLLHVGKHIKVKTKEPLQGQRVFRGTI-GS 114

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            E G  L     G+K   +L+ +I  D +   R
Sbjct: 115 LEAGVLLISSVEGKK---QLKHSIPLDLVAEVR 144


>gi|322378931|ref|ZP_08053345.1| hypothetical protein HSUHS1_0574 [Helicobacter suis HS1]
 gi|322379785|ref|ZP_08054082.1| hypothetical protein HSUHS5_0146 [Helicobacter suis HS5]
 gi|321147753|gb|EFX42356.1| hypothetical protein HSUHS5_0146 [Helicobacter suis HS5]
 gi|321148607|gb|EFX43093.1| hypothetical protein HSUHS1_0574 [Helicobacter suis HS1]
          Length = 152

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 13/152 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ ++++  ++ M      ++ L+E K  +L+I ++  +G  +L  CEE S  ISP+LD
Sbjct: 5   TELENLLETTLKGMGCALYDVAFLKENKRDILRISIKALEGPTSLDICEEASLLISPLLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           V    +  Y LEVSS G++R + +   F    G +V C+ +    +  +L G I   + +
Sbjct: 65  VHAPFKNAYTLEVSSMGLERSLSKLKHFKLSIGDLVECKTI----ENTRLKGVIQAVNGS 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              L+  +  E         + F+++  A+ I
Sbjct: 121 SIVLQCAEGLEN--------LPFENIKKAKTI 144


>gi|161507685|ref|YP_001577639.1| hypothetical protein lhv_1346 [Lactobacillus helveticus DPC 4571]
 gi|172048309|sp|A8YVR1|RIMP_LACH4 RecName: Full=Ribosome maturation factor rimP
 gi|160348674|gb|ABX27348.1| hypothetical protein lhv_1346 [Lactobacillus helveticus DPC 4571]
          Length = 158

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 11/159 (6%)

Query: 23  GDISSVIQPVIE----EMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +  +++PV+E    E     V +  ++EK    L+I+V+R    + + +   LS+ +S
Sbjct: 2   SKVVDLVRPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVS 61

Query: 78  PILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +   +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +
Sbjct: 62  EKLDTIDPDPLPDPYVLELSSPGAERPIKTEADWKRALNDYVHIGLYQKIDDKKVYEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +     LE + +  +     ++ I    +   R  +
Sbjct: 122 KYYNNDEIVLEVKDKTRRK----KLTIPRKLIAKIRFAI 156


>gi|325957050|ref|YP_004292462.1| ribosome maturation protein RimP [Lactobacillus acidophilus 30SC]
 gi|325333615|gb|ADZ07523.1| ribosome maturation protein RimP [Lactobacillus acidophilus 30SC]
 gi|327183773|gb|AEA32220.1| ribosome maturation protein RimP [Lactobacillus amylovorus GRL
           1118]
          Length = 158

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  V++P+I+E     V +  ++EK    L+I+V+R+   + + +   LS+ +S  LD  
Sbjct: 8   VRPVVEPIIDEHGDMLVDMEYVKEKGQNYLRIYVDREPNGIDIDEIAALSELVSEKLDTI 67

Query: 84  --NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LE+SSPG +RP+  ++D+ +     +   +     DK+   G +   ++ 
Sbjct: 68  NPDPFPEPYVLELSSPGAERPIKTEADWKKALNDYIHIGLYQKIKDKKVYEGTLKSYNDE 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE   +  +      + +    + + R  +
Sbjct: 128 EIVLEVRDKTRRK----TLTVPRKLIANIRFAI 156


>gi|302335789|ref|YP_003800996.1| protein of unknown function DUF150 [Olsenella uli DSM 7084]
 gi|301319629|gb|ADK68116.1| protein of unknown function DUF150 [Olsenella uli DSM 7084]
          Length = 157

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 13/161 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN---MTLRDCEE 71
                L   + + ++          V + ++   K  ++++ ++  D     ++L +   
Sbjct: 1   MATTDLERQLVTALEDAARSHGIDVVDVEVVGSSKAPVVRVRIDHADEGVPTISLDEVAA 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            S  I+ +LD  + I G Y LEVSSPG+ RP+ ++ DF R+ G  V+ +   +   +++ 
Sbjct: 61  QSGWINEVLDDADPIAGSYVLEVSSPGLARPLRKERDFERFAGSDVSLKTF-AREGRRRF 119

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G+++G       +E          E +++++ D + S  +
Sbjct: 120 TGRLLGVEGGRVVVE--------CGEERVSLALDDIKSCHV 152


>gi|241895993|ref|ZP_04783289.1| hypothetical protein of function DUF150 [Weissella
           paramesenteroides ATCC 33313]
 gi|241870724|gb|EER74475.1| hypothetical protein of function DUF150 [Weissella
           paramesenteroides ATCC 33313]
          Length = 235

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 81/172 (47%), Gaps = 8/172 (4%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDC 69
           +E R      +  ++ ++++P++ +  F    +   ++  + +L++ V+R DG + + D 
Sbjct: 2   HEGR-VRMAKVTENVQAILKPILAKKGFDLWDVLYEKQDSDFVLRVLVDRVDGEINMDDL 60

Query: 70  EELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
             L++ IS  LD+   +     Y L+VSSPG DR + +  +F+   G  +   +      
Sbjct: 61  VMLTEVISDELDMITPDPFPQAYLLDVSSPGADRELQQPGNFVWAVGKFIEVILNNPVAG 120

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
            +K  G+++   +    ++   + +  +    I I  D++  A L V+ + +
Sbjct: 121 LEKFTGQLVSFLDDKLTIDVALKTKHQL----IEIDLDNIQKANLSVSQDRI 168



 Score = 48.9 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 7/72 (9%)

Query: 100 DRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ 159
           DR +  + D+      +V          +++ +G++   +     +  E   E       
Sbjct: 166 DRILTTEEDYEWARHKLVHISTYQKINGRKEFLGELNNFTPEDLIITDESNDE------- 218

Query: 160 IAISFDSLLSAR 171
           + I   ++  AR
Sbjct: 219 LLIPRRAVAQAR 230


>gi|15645660|ref|NP_207836.1| hypothetical protein HP1046 [Helicobacter pylori 26695]
 gi|6647978|sp|O25687|RIMP_HELPY RecName: Full=Ribosome maturation factor rimP
 gi|2314193|gb|AAD08091.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 146

 Score =  127 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I  VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIGGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|315586392|gb|ADU40773.1| conserved hypothetical protein [Helicobacter pylori 35A]
 gi|317181743|dbj|BAJ59527.1| hypothetical protein HPF57_0453 [Helicobacter pylori F57]
          Length = 146

 Score =  127 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL+ E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIRENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|315038576|ref|YP_004032144.1| hypothetical protein LA2_07130 [Lactobacillus amylovorus GRL 1112]
 gi|312276709|gb|ADQ59349.1| hypothetical protein LA2_07130 [Lactobacillus amylovorus GRL 1112]
          Length = 158

 Score =  127 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  V++P+I+E     V +  ++EK    L+I+V+R+   + + +   LS+ +S  LD  
Sbjct: 8   VRPVVEPIIDEHGDMLVDMEYVKEKGQNYLRIYVDREPNGIDIDEIAALSELVSEKLDTI 67

Query: 84  --NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LE+SSPG +RP+  ++D+ +     +   +     DK+   G +   ++ 
Sbjct: 68  NPDPFPEPYVLELSSPGAERPIKTEADWKKALNDYIHIGLYQKIMDKKVYEGTLKSYNDE 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE   +  +      + +    + + R  +
Sbjct: 128 EIVLEVRDKTRRK----TLTVPRKLIANIRFAI 156


>gi|153813000|ref|ZP_01965668.1| hypothetical protein RUMOBE_03407 [Ruminococcus obeum ATCC 29174]
 gi|149830947|gb|EDM86037.1| hypothetical protein RUMOBE_03407 [Ruminococcus obeum ATCC 29174]
          Length = 129

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +++ P++E   F  V +  ++E  N  L+ ++++  G +T+ DCE +S+A S  L
Sbjct: 35  EQKAEALLAPIVEGQGFELVDVEYVKEAGNWYLRGYIDKP-GGITVNDCEAVSRAFSDKL 93

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKS 107
           D  + IE  Y +E+SSPG+DRP+ R+ 
Sbjct: 94  DENDFIEDSYIMEISSPGLDRPLKRRR 120


>gi|308184203|ref|YP_003928336.1| Ribosome maturation factor rimP [Helicobacter pylori SJM180]
 gi|308060123|gb|ADO02019.1| Ribosome maturation factor rimP [Helicobacter pylori SJM180]
          Length = 146

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKIPKHFKLSLGEKVEVKLT----NKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DWSADFELENHAIKSVEYKDL 137


>gi|326692689|ref|ZP_08229694.1| hypothetical protein LargK3_02896 [Leuconostoc argentinum KCTC
           3773]
          Length = 158

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 14/158 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQAISP 78
           +  +I+++I P++ E +     ++  +E    +L+I V++ D   +T+ D  + +QA++ 
Sbjct: 5   VEQEITALITPILVEQNDLLWDLTYTKEGGQKVLRIMVDKPDHTFITMADITDFTQAVND 64

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFL--RWNGHVVACEIVLSSGDKQKLIGK 134
           +LD    + I   Y L++SSPG DRP+ +   +   +     +   +  +   ++K  GK
Sbjct: 65  LLDTVEPDPIPEAYLLDISSPGADRPLKQPWHYKWAQEADETILVALFAAKDGQKKWQGK 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +   ++ G  L           +  +++ FD +  A L
Sbjct: 125 VKSVTDDGIVL--------STAQGDLSLQFDEIAKAVL 154


>gi|124515702|gb|EAY57211.1| conserved protein of unknown function [Leptospirillum rubarum]
          Length = 167

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M    ++  ++ P    +      + L  +   + ++FV+   G + L   E +S+ IS 
Sbjct: 1   MRFEKELDHILTP----LGLSLHDLVLPGKNRGVFKVFVDHPQG-VGLDQLEAVSRRISD 55

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDV +   G YRLEVSSPG+DR +    D L   G  +  ++      ++   G I G+
Sbjct: 56  LLDVLDPFPGKYRLEVSSPGLDRVLRIPEDLLLHVGKHIKVKMKEPFQGQRVFRGTI-GS 114

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            E G  L     G+K   +L+ +I  D +   R
Sbjct: 115 LEAGVLLISSVEGKK---QLKHSIPLDLVAEVR 144


>gi|16329286|ref|NP_440014.1| hypothetical protein slr0742 [Synechocystis sp. PCC 6803]
 gi|1651766|dbj|BAA16694.1| slr0742 [Synechocystis sp. PCC 6803]
          Length = 176

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 9/145 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  DI ++ QP+ E++            K   +L+I +     + +L DCE  S++    
Sbjct: 30  VIPDILALAQPIAEDLGLEVTDAVFQTNKRPPVLRIDIRNLQQDTSLNDCEAFSRSFEAQ 89

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+  ++I   Y LEVSSPGI   +  + DF+ + G  V          + +  G + G  
Sbjct: 90  LEESSLIASAYVLEVSSPGISPYLATERDFIAFKGFEVVVTSDNPHQGQSQWQGSLQGRD 149

Query: 140 ETGFFLEKEKRGEKDMNELQIAISF 164
               +L    R         +AI  
Sbjct: 150 GEAVYLSIRGR--------TVAIPL 166


>gi|187478886|ref|YP_786910.1| hypothetical protein BAV2396 [Bordetella avium 197N]
 gi|123514388|sp|Q2KXY5|RIMP_BORA1 RecName: Full=Ribosome maturation factor rimP
 gi|115423472|emb|CAJ50006.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 159

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 9/153 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R+DG + + DCE++S+ +S + +V
Sbjct: 2   ADLFALTEEALAGMGIELVDVE--RAALGLLRVTIDREDG-VRIEDCEQVSRQLSRVYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS--- 139
           ENI   + RLEV SPG+DRP+  +++F R+ G  +  ++  +   ++   G +       
Sbjct: 59  ENI--DYKRLEVGSPGVDRPLRNEAEFRRFAGERIEIKLREAVDGRKVFTGILQEADTSA 116

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +       E   +KD  ++ ++ + D +  A+L
Sbjct: 117 DDKTVFGLEFEAKKDDIQV-LSFTLDDIERAKL 148


>gi|317010677|gb|ADU84424.1| Ribosome maturation factor rimP [Helicobacter pylori SouthAfrica7]
          Length = 146

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E  + +L++ ++  +G ++L +C+++S+ ISP+
Sbjct: 1   MTKRIEERIEGVIESLGYLLYDVSLIKENEHNILRVSLKNPNGAVSLDNCQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + ++  Y LEVSS G++R +     F    G  V  ++V    +K+     +   +
Sbjct: 61  LDVCDFLKDAYILEVSSMGLERVLKTPKHFKLSLGEKVGVKLV----NKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHTIKSVEYKDL 137


>gi|317177213|dbj|BAJ55002.1| hypothetical protein HPF16_0405 [Helicobacter pylori F16]
          Length = 146

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ +IE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGMIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|15604409|ref|NP_220926.1| hypothetical protein RP554 [Rickettsia prowazekii str. Madrid E]
 gi|6647940|sp|Q9ZCZ6|RIMP_RICPR RecName: Full=Ribosome maturation factor rimP
 gi|3861103|emb|CAA15003.1| unknown [Rickettsia prowazekii]
          Length = 117

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 1/109 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +A  I+++I+  + +M F  V +        ++++ ++  +GN +++ DC  +S+ IS I
Sbjct: 4   IAQQITNIIEESLTDMGFELVLVKFKGVSPKVVEVLIDSLNGNKISIEDCTNVSRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           LDVE++IE  Y LEVSS GI+R +V+  ++ R+ G  V  ++      K
Sbjct: 64  LDVEDLIEEAYSLEVSSSGIERTLVKFENYNRFLGREVKIKLKELLNGK 112


>gi|328465728|gb|EGF36932.1| ribosome maturation protein RimP [Lactobacillus helveticus MTCC
           5463]
          Length = 158

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 7/153 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  VI+ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S  LD  
Sbjct: 8   VRPVIETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVSEKLDTI 67

Query: 84  NI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +   +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +   +  
Sbjct: 68  DPDPLPDPYVLELSSPGAERPITTEADWKRALNDYVHIGLYQKIDDKKVYEGTLKYYNND 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE + +  +     ++ I    +   R  +
Sbjct: 128 EIVLEVKDKTRRK----KLTIPRKLIAKIRFAI 156


>gi|255994862|ref|ZP_05427997.1| conserved hypothetical protein [Eubacterium saphenum ATCC 49989]
 gi|255993575|gb|EEU03664.1| conserved hypothetical protein [Eubacterium saphenum ATCC 49989]
          Length = 187

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 43/189 (22%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE--------------------- 58
           +   +    +  + E+S     +    E K+ +L+++++                     
Sbjct: 5   IENAVEEACKAKLAELSLEIYSVEYKREGKDWILRVYIDRMFCEDAVGIGYDKQAGMNTD 64

Query: 59  -------------RDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVR 105
                        + +  + + +C  +S+AIS  LD  +II+ +Y LEVS+PGIDR + +
Sbjct: 65  ARCQKAQGIKADSKREKPIGIDECTAISEAISEYLDKNDIIDNNYYLEVSTPGIDRELKK 124

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
             DF+R+ G  V   +      +++  G ++  ++ G  +E ++  +   N        +
Sbjct: 125 DIDFIRFKGRSVDISLYKRIDGQKEYRGTLIEKNDEGIAVEVDESTKVFSN--------N 176

Query: 166 SLLSARLIV 174
            +    L +
Sbjct: 177 DVAKVNLAI 185


>gi|217077787|ref|YP_002335505.1| hypothetical protein THA_1728 [Thermosipho africanus TCF52B]
 gi|259645125|sp|B7IDT7|RIMP_THEAB RecName: Full=Ribosome maturation factor rimP
 gi|217037642|gb|ACJ76164.1| hypothetical protein THA_1728 [Thermosipho africanus TCF52B]
          Length = 148

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 13/153 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + +   ++ +     I    +     L+I ++     ++ +DCE +S+ +   
Sbjct: 4   IVSKVKEIAESACKKYNLELFDIKYYNKSGKWFLEIVIDNPLDYVSTKDCENISREVEFQ 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  +II   Y L VSSPG+DRP+    DF R+  + V  ++     + + +IG I    
Sbjct: 64  LDKLDIIPQRYYLTVSSPGLDRPLRSIDDFKRFINNKVKIKL-----ENETIIGYIKDVK 118

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  FLE+  +  K        I ++ +  A L
Sbjct: 119 DSVIFLEENNKKIK-------EIKYNQIKKANL 144


>gi|312875705|ref|ZP_07735702.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b]
 gi|311088770|gb|EFQ47217.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b]
          Length = 144

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 32  VIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIEG 88
           ++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+   + +  
Sbjct: 1   LVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLPD 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE  
Sbjct: 61  PYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI- 119

Query: 149 KRGEKDMNELQIAISFDSLLSARLIV 174
              +    + +IAI  + + + R  +
Sbjct: 120 ---KIKTQQQKIAIPRNMIANIRFAI 142


>gi|256843342|ref|ZP_05548830.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256849839|ref|ZP_05555270.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262046915|ref|ZP_06019875.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
 gi|293381213|ref|ZP_06627221.1| SP14.3 family protein [Lactobacillus crispatus 214-1]
 gi|295693138|ref|YP_003601748.1| hypothetical protein LCRIS_01276 [Lactobacillus crispatus ST1]
 gi|312978243|ref|ZP_07789987.1| SP14.3 protein [Lactobacillus crispatus CTV-05]
 gi|256614762|gb|EEU19963.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256713328|gb|EEU28318.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260572897|gb|EEX29457.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
 gi|290922253|gb|EFD99247.1| SP14.3 family protein [Lactobacillus crispatus 214-1]
 gi|295031244|emb|CBL50723.1| UPF0090 protein [Lactobacillus crispatus ST1]
 gi|310894961|gb|EFQ44031.1| SP14.3 protein [Lactobacillus crispatus CTV-05]
          Length = 158

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 71/157 (45%), Gaps = 7/157 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S  
Sbjct: 4   VIDSVRPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVSEK 63

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    + +   Y LE+SSPG +RP+  K+D+ +     +   +     +K+   G +  
Sbjct: 64  LDALDPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIENKKMYEGTLKS 123

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++    LE + +  +      + +    + + R  +
Sbjct: 124 YNDDEVVLEIKDKTRRK----TLTVPRKLIANIRFAI 156


>gi|171058382|ref|YP_001790731.1| hypothetical protein Lcho_1699 [Leptothrix cholodnii SP-6]
 gi|226736416|sp|B1XY65|RIMP_LEPCP RecName: Full=Ribosome maturation factor rimP
 gi|170775827|gb|ACB33966.1| protein of unknown function DUF150 [Leptothrix cholodnii SP-6]
          Length = 183

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 23/178 (12%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL---------RDCEELSQAI 76
              ++  +  M +  V+         LL ++++R  G++ L          DCE +++ +
Sbjct: 4   QQAVETTVTGMGYELVECE--RSARGLLCVYIDRVPGSVYLTGPGEFVLVEDCELVTRQL 61

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             + +VEN+   + RLEVSSPG+DRP+ +  DFLR+ G  V   +      ++   G + 
Sbjct: 62  RYLFEVENV--DYSRLEVSSPGLDRPLRKVGDFLRFLGSDVDVTLKAPFQGRKNYRGLLR 119

Query: 137 GTSET---GFFLEKEKRGEKDMNELQIAISFDSLLSARLI-VTDELLRASLNNYGSYA 190
              +T   GF L  +   E  +    +  + D +  ARL+ V D   +  +       
Sbjct: 120 QAGDTPEQGFELVFQDGKEDKV----LGFALDEVREARLVPVVD--FKGRMRQTADAP 171


>gi|83816343|ref|YP_445896.1| hypothetical protein SRU_1779 [Salinibacter ruber DSM 13855]
 gi|83757737|gb|ABC45850.1| Uncharacterized BCR, YhbC family COG0779 [Salinibacter ruber DSM
           13855]
          Length = 217

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 79/155 (50%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           LA  +S + + VI    +  V + +   K   +++++++ ++  +   D   +S+ I  +
Sbjct: 70  LADRVSGLTEEVIVGTDYFLVDVEVRGHKGTRVVEVYIDSEE-EVGHDDLALISKEIGFL 128

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++++G Y+LE+SSPGI RP+   + + +  G  +      S GD++ ++G +    
Sbjct: 129 LDVEDVVDGSYKLELSSPGIKRPLTMPAQYRKNVGRTLRVR-FESDGDEEIVVGDLTDAD 187

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    LE         +  ++ + + ++  AR+ +
Sbjct: 188 DEEIELEL-------PSAERLQLPYTTITQARIEL 215


>gi|330718232|ref|ZP_08312832.1| hypothetical protein LfalK3_02050 [Leuconostoc fallax KCTC 3537]
          Length = 158

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQAISP 78
           +   ++ +++PVI+E       ++   E    +L+I +++ D   +T+ D  +L++ I+ 
Sbjct: 5   VEQTVAQLVKPVIDEHGDILWDLTFGNEGGQRVLRILIDKADHEFITMNDLTKLTEEINE 64

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFL--RWNGHVVACEIVLSSGDKQKLIGK 134
           +LD    + I G Y L++SSPG DRP+     +   +     +   + ++   ++K  GK
Sbjct: 65  LLDNSEPDPIPGTYMLDISSPGADRPLKALWHYQWAQEADENILVSLFVAKNGRKKWQGK 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           I   ++    L  +           + ++F  +  A L V
Sbjct: 125 ISEINDDAIVLITDDE--------TLTLAFSEIAKASLDV 156


>gi|325677900|ref|ZP_08157542.1| hypothetical protein CUS_7307 [Ruminococcus albus 8]
 gi|324110454|gb|EGC04628.1| hypothetical protein CUS_7307 [Ruminococcus albus 8]
          Length = 183

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 63/153 (41%), Gaps = 3/153 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ + QP+ +E+      +   +E     L++ +++ DG +T+ DCE  ++  + IL
Sbjct: 16  VERVTELAQPLADELGLFLWDVRFEKEGATWYLRVLIDK-DGGVTMEDCENFTRPFNKIL 74

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLIGKIMGTS 139
           D E+ I   Y  E  SPG+ R + +   F    G  V   ++      +++ I  ++G  
Sbjct: 75  DDEDPIAQSYVFECGSPGLGRELRKPIHFEVCIGDAVRVRLIRPDENGEREFIVGLVGYD 134

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    +  +   E       +          +L
Sbjct: 135 DEEKVIACQTLDENGDGVENVQFRLSDCAFVKL 167


>gi|309804399|ref|ZP_07698473.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
 gi|308163514|gb|EFO65787.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
          Length = 144

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 7/146 (4%)

Query: 32  VIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIEG 88
           ++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+   + +  
Sbjct: 1   LVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLPD 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE  
Sbjct: 61  PYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI- 119

Query: 149 KRGEKDMNELQIAISFDSLLSARLIV 174
              +      +IAI  + + + R  +
Sbjct: 120 ---KIKTQPKKIAIPRNMIANIRFAI 142


>gi|325847928|ref|ZP_08170099.1| hypothetical protein HMPREF9246_0391 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480797|gb|EGC83851.1| hypothetical protein HMPREF9246_0391 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 146

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 10/151 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +   ++  I  + +  V I  + E KN +L+ F+ + DG +T+ DCE+ S  +S
Sbjct: 1   MDLISKLKENLESDINNLGYELVDIEFVTEGKNKILRFFIYK-DGGITIDDCEKTSNLLS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSSP + RP+    D  R    ++  ++     + +K +  I  
Sbjct: 60  ERLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELLEVKLK----NGEKFLANIEE 115

Query: 138 TSETGFFLEKEKR----GEKDMNELQIAISF 164
             E     + E       + ++  ++I I F
Sbjct: 116 IKEDSLVFKCEDGQKEVDKNEIKTIKIEIVF 146


>gi|283850805|ref|ZP_06368091.1| protein of unknown function DUF150 [Desulfovibrio sp. FW1012B]
 gi|283573728|gb|EFC21702.1| protein of unknown function DUF150 [Desulfovibrio sp. FW1012B]
          Length = 181

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 66/160 (41%), Gaps = 13/160 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVE--------RDDGNMTLRDCEELS 73
             I  +I P +  M      + L    +  L++++++         +   +T+ +C   S
Sbjct: 9   DKIRELISPFLASMGLVVWGVELAASGHRQLVRLYLDLAADTPRTPERRGVTIDECARAS 68

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++ +L++E++    Y LEVSSPG+ R     +    + G V+  ++ +    +++  G
Sbjct: 69  RHLATLLEMEDLFHDPYVLEVSSPGLGRRFFEPAQLPAYVGQVIEAKLTVPRDGRKRFKG 128

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +         +  +   E       ++  F+     RLI
Sbjct: 129 VLTAVEGERVTILVDAAPE----AFPLSFDFEEAEKVRLI 164


>gi|34223734|sp|P72687|RIMP_SYNY3 RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 9/145 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  DI ++ QP+ E++            K   +L+I +     + +L DCE  S++    
Sbjct: 5   VIPDILALAQPIAEDLGLEVTDAVFQTNKRPPVLRIDIRNLQQDTSLNDCEAFSRSFEAQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+  ++I   Y LEVSSPGI   +  + DF+ + G  V          + +  G + G  
Sbjct: 65  LEESSLIASAYVLEVSSPGISPYLATERDFIAFKGFEVVVTSDNPHQGQSQWQGSLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISF 164
               +L    R         +AI  
Sbjct: 125 GEAVYLSIRGR--------TVAIPL 141


>gi|217033305|ref|ZP_03438736.1| hypothetical protein HP9810_9g58 [Helicobacter pylori 98-10]
 gi|216944246|gb|EEC23671.1| hypothetical protein HP9810_9g58 [Helicobacter pylori 98-10]
          Length = 146

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y  EVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYIFEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|86609688|ref|YP_478450.1| hypothetical protein CYB_2246 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123501415|sp|Q2JJI0|RIMP_SYNJB RecName: Full=Ribosome maturation factor rimP
 gi|86558230|gb|ABD03187.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 156

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVE--RDDGNMTLRDCEELSQAIS 77
           L   + S+ +P+  ++ ++ VQ+     ++  +L++ +     D   +  DCE +SQA+ 
Sbjct: 5   LIPQLESLARPLAAQLGYQLVQMVFHTNQHPPVLRVDIRPLDPDRETSHADCEAMSQALE 64

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I G Y LEVSSPGI   +    DF+ + G  V   +      K    G ++G
Sbjct: 65  VELDRVDLIPGQYVLEVSSPGISNLLTSDRDFVVFKGFAVEVTLDPPYKGKAVWSGHLLG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
             E    L  + R        ++ +   S+   R+ ++ E
Sbjct: 125 RDEERVALSLKGR--------RVQLPRASVQ--RVALSSE 154


>gi|227904179|ref|ZP_04021984.1| protein of hypothetical function DUF150 [Lactobacillus acidophilus
           ATCC 4796]
 gi|227868198|gb|EEJ75619.1| protein of hypothetical function DUF150 [Lactobacillus acidophilus
           ATCC 4796]
          Length = 172

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 74/162 (45%), Gaps = 11/162 (6%)

Query: 20  GLAGDISSVIQPVIE----EMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                + ++++PV+E    E     V +  ++EK+   L+I+V+R+   + + +   LS+
Sbjct: 13  NFLSKVVNLVRPVVESIIDEHGDMLVNMEYIKEKSQNYLRIYVDREPNGIDIDEIAVLSE 72

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            IS  LD    + +   Y LE+SSPG +RP+  K+D+ +     +   +     DK+   
Sbjct: 73  LISEKLDTLDPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIEDKKMYE 132

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G +   ++    LE + +  +      + +    + + R  +
Sbjct: 133 GTLKSYNDDEIILEVKDKTRRK----TLTVPRKLIANIRFAI 170


>gi|239907794|ref|YP_002954535.1| hypothetical protein DMR_31580 [Desulfovibrio magneticus RS-1]
 gi|239797660|dbj|BAH76649.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 189

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVE-------RDDG-NMT 65
           +     +A  +  +I P    +      + L    +  L++++++         +   +T
Sbjct: 1   MLQKNAVADAVRDLIAPYAATLGLAVWGVELASAGHRQLVRLYLDLAADTPRTPERLGVT 60

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           + +C  +S+ +  +L+V+ I    Y LEVSSPG+ R        L + G  +  ++ +  
Sbjct: 61  IDECARVSRHLGALLEVDEIFHNPYVLEVSSPGLSRRFFEAGQLLAYVGREIEAKLAVPR 120

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +++  G + G S+    +  +   +    E  I+  F      RLI
Sbjct: 121 EGRKRFKGILSGVSDQTVSMTVDPGAK----EFSISFDFAEADKIRLI 164


>gi|317013844|gb|ADU81280.1| Ribosome maturation factor rimP [Helicobacter pylori Gambia94/24]
          Length = 146

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYTLEVSSMGLERTLKIPKHFKLSLGEKVEVKLI----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|212696552|ref|ZP_03304680.1| hypothetical protein ANHYDRO_01090 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676488|gb|EEB36095.1| hypothetical protein ANHYDRO_01090 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 146

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +   ++  I  + +  V I  + E N  +L+ F+ + DG +T+ DCE+ S  +S
Sbjct: 1   MDLISKLKENLESDINNLGYELVDIEFVTEGNNKILRFFIYK-DGGITIDDCEKTSNLLS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSSP + RP+    D  R    ++  ++     + +K +  I  
Sbjct: 60  ERLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELLEVKLK----NGEKFLANIEE 115

Query: 138 TSETGFFL----EKEKRGEKDMNELQIAISF 164
             E         E+++  + ++  ++I I F
Sbjct: 116 IKENSLVFKCEDEQKEVDKNEIKTIKIEIVF 146


>gi|207723238|ref|YP_002253637.1| hypothetical protein RSMK00472 [Ralstonia solanacearum MolK2]
 gi|206588434|emb|CAQ35397.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 144

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 10/135 (7%)

Query: 43  ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           + +      LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVSSPG+DRP
Sbjct: 1   MEVERAPAGLLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--HYERLEVSSPGLDRP 58

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE----TGFFLEKEKRGEKDMNEL 158
           +   +DF R+ G  V   + L    ++   G +   +         LE E +        
Sbjct: 59  LRTLTDFTRFAGQEVKVTLRLPVEGQKNFTGIVQAPTGEPGQERIGLEFEGKD----GPA 114

Query: 159 QIAISFDSLLSARLI 173
            +  +   L  ARL+
Sbjct: 115 LLEFTLSELDRARLV 129


>gi|261416679|ref|YP_003250362.1| protein of unknown function DUF150 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373135|gb|ACX75880.1| protein of unknown function DUF150 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326580|gb|ADL25781.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 150

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 13/158 (8%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++S+I    +  S   V+       K   L+IF+++ +G +T+ DC  +S  +S
Sbjct: 1   MVAQEKLNSLIADACKSASVTLVEADVFRAGKRKTLRIFIDKPEG-VTIDDCTNVSHFLS 59

Query: 78  PILDVE-NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             LD++  +IEG Y LEVSSPGIDRP+   +DF R  G ++           + + G+++
Sbjct: 60  DALDLDPELIEGAYTLEVSSPGIDRPLKSMADFERNKGRLLRVTRST----GKPVTGELL 115

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              E    L+ +       N  +I I    +LSA++ V
Sbjct: 116 NADEENLTLKLKG------NAGEIVIPRSEVLSAKVEV 147


>gi|207109808|ref|ZP_03243970.1| hypothetical protein HpylH_11664 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 143

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 5/134 (3%)

Query: 28  VIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+LDV + I
Sbjct: 5   LLEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPLLDVCDFI 64

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           +  Y LEVSS G++R +     F    G  V  ++     +K+     +   ++     E
Sbjct: 65  QDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDANDLSADFE 120

Query: 147 KEKRGEKDMNELQI 160
            E    K +    +
Sbjct: 121 LEDHAVKSVEYKDL 134


>gi|288574933|ref|ZP_06393290.1| protein of unknown function DUF150 [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570674|gb|EFC92231.1| protein of unknown function DUF150 [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 181

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 77/150 (51%), Gaps = 12/150 (8%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDV-- 82
              I+ ++E + +  + + + +E     ++++++   G +++RDCE +S+ I+  L+   
Sbjct: 8   KEEIREIVESLGYEFIGLEVKKESAASFVRVYMDSL-GGISVRDCEIVSRRINNWLEESG 66

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E++++  Y LEVSSPG++RP+    DF R++G   +  +      ++++ G +  + +  
Sbjct: 67  EDLLDDRYYLEVSSPGLERPLFSLDDFRRFSGKEASIRLNELVEGRRRINGIVSVSQDGS 126

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +E +                + +LSA+L
Sbjct: 127 IRVENQDGA--------FEFPLEMILSAKL 148


>gi|296135766|ref|YP_003643008.1| protein of unknown function DUF150 [Thiomonas intermedia K12]
 gi|295795888|gb|ADG30678.1| protein of unknown function DUF150 [Thiomonas intermedia K12]
          Length = 191

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 5/118 (4%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVEN 84
           +  I   +  +    V++  L     LL++ ++  DG  +T+ DCE +++ +  + +VEN
Sbjct: 4   AQAIDTAVTSLGLELVEVEHLPRG--LLRVTIDHADGAPVTVEDCERVTRQLQYVFEVEN 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +   + RLEVSSPG+DRP+ +  DF+R+ G  +   + +    ++K  G ++  S+  
Sbjct: 62  V--DYGRLEVSSPGLDRPLRKAEDFVRFAGLEIDVVLRVPFQGRKKYRGVLLERSQDD 117


>gi|332638632|ref|ZP_08417495.1| ribosome maturation protein RimP [Weissella cibaria KACC 11862]
          Length = 228

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 73/163 (44%), Gaps = 7/163 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + +V+ P + +  F    +   ++  +++L++ V+R DG + + D   L++ I  
Sbjct: 3   NVVETVQAVLAPELADQGFDLWDVIYEKQGSDMVLRVLVDRLDGAINMDDLVMLTETIGE 62

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            +D    +     Y ++VSSPG +R + R  D+       +   +      + +  G+++
Sbjct: 63  RMDQIEPDPFPEAYLMDVSSPGAERELKRPQDYEWALEKYIHVALNQEVDGENEFDGELL 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
             ++    L    +G++     +I +   ++  A L ++ E +
Sbjct: 123 AVTDDMLTLAITVKGKRK----RIDVPRTAIKQANLTISQERI 161



 Score = 57.0 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 7/72 (9%)

Query: 100 DRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ 159
           +R +    DF      +V          K+   G++   S+    +  E        E  
Sbjct: 159 ERILTTPEDFDWAMNKMVRVSTYQKIDGKKDFAGELTAVSDEALTITLED-------ETA 211

Query: 160 IAISFDSLLSAR 171
           + +  D++  AR
Sbjct: 212 VDVPRDAIAQAR 223


>gi|139436992|ref|ZP_01771152.1| Hypothetical protein COLAER_00126 [Collinsella aerofaciens ATCC
           25986]
 gi|133776639|gb|EBA40459.1| Hypothetical protein COLAER_00126 [Collinsella aerofaciens ATCC
           25986]
          Length = 170

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 10/159 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISPI 79
              I   ++ V  +     V + L+   K   +++ +E  +G +++L D    ++ +  +
Sbjct: 13  EQAIIDALEAVAPQHDIDIVDVELVGATKAPCVRVRIEGAEGQSLSLNDVTANTKWVGDV 72

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           ++  + I   Y LEVSSPG+ RP+ R SDF R+ G         ++  ++K  GKI   +
Sbjct: 73  IEELDPISSSYTLEVSSPGMARPLRRPSDFARFVGENCEL-TSTATEGRRKYAGKIASAT 131

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDEL 178
           ET   LE E           + + F  +   +L  T + 
Sbjct: 132 ETSVTLELED-------GESVTLDFSDVKKCKLKPTYDF 163


>gi|294339929|emb|CAZ88292.1| conserved hypothetical protein [Thiomonas sp. 3As]
          Length = 191

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 5/118 (4%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVEN 84
           +  I   +  +    V++  L     LL++ ++  DG  +T+ DCE +++ +  + +VEN
Sbjct: 4   AQAIDTAVTSLGLELVEVEHLPRG--LLRVTIDHADGAPVTVEDCERVTRQLQYVFEVEN 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +   + RLEVSSPG+DRP+ +  DF+R+ G  +   + +    ++K  G ++  S+  
Sbjct: 62  V--DYGRLEVSSPGLDRPLRKSEDFVRFAGLEIDVVLRVPFQGRKKYRGVLLERSQDD 117


>gi|284992352|ref|YP_003410906.1| hypothetical protein Gobs_3968 [Geodermatophilus obscurus DSM
           43160]
 gi|284065597|gb|ADB76535.1| protein of unknown function DUF150 [Geodermatophilus obscurus DSM
           43160]
          Length = 196

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 8/160 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  ++ ++ PV+E   +   ++ +    +  ++++ V+RD G +TL D  E+S+A+S  
Sbjct: 10  VATRMAGLVAPVVEAAGYDLEELVVTPAGRRSIVRVVVDRDAG-VTLDDVAEVSRAVSTA 68

Query: 80  LDVEN--IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD  +       Y LEV+SPG+DRP+     + R  G +V   +    G  +++  +++ 
Sbjct: 69  LDEHDGEFGSAPYVLEVTSPGVDRPLTEPRHWRRNTGRLVTVAVGR-EGSSEQVTARVLE 127

Query: 138 TSETGFFLEKEKRGE---KDMNELQIAISFDSLLSARLIV 174
               G  L  E +G+   K     +  + +  L + R+ V
Sbjct: 128 VDGDGVTLAVEAKGKPGAKKRPPTRRQVPWQELGAGRVQV 167


>gi|145589411|ref|YP_001156008.1| hypothetical protein Pnuc_1229 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|226696286|sp|A4SY80|RIMP_POLSQ RecName: Full=Ribosome maturation factor rimP
 gi|145047817|gb|ABP34444.1| protein of unknown function DUF150 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 163

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 16/157 (10%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD--GNMTLRDCEELSQAISPILDVE 83
             +I   +E + +  V+I    E   LL++ +E  D    +++ DCE++S  +S  L VE
Sbjct: 4   QQIIAAELENLGYTLVEIE--REAGGLLRVTIENPDYERLISVLDCEKVSHQLSYALPVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT----- 138
           NI   + RLE+SSPG+DRP+   +DF R+ G  V  ++ +++G+++   G + G      
Sbjct: 62  NI--PYERLEISSPGLDRPVKSAADFERFTGMEVDLKLRVAAGNRKNFRGVLQGLLSGEL 119

Query: 139 --SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +  F L  E     D  E Q+  S   +   RL+
Sbjct: 120 NSPDAKFGLLFEGA---DGAESQLEFSLAEVDKTRLV 153


>gi|283955315|ref|ZP_06372815.1| hypothetical protein C414_000440054 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793229|gb|EFC31998.1| hypothetical protein C414_000440054 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 147

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 17/153 (11%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERD---DG---NMTLRDCEELSQAISPILD 81
           ++ + +E +       L  E    + ++FV +     G    + L DC  LS+ +SPI D
Sbjct: 3   LEALCKEANLELYDSELTSENGKKIYRVFVMKPLDEKGQRVGVNLDDCARLSEILSPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE  + G Y LEVSSPG++R + +   F +  G +V         +K+K+  KIM   + 
Sbjct: 63  VEPPVNGEYFLEVSSPGLERKLGKIEHFAKSIGELVKITT----NEKEKIEAKIMSVEDE 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE  +  EK        + F  +  AR  +
Sbjct: 119 NIILENLENQEKT------TLKFSDIKKARTFI 145


>gi|317057641|ref|YP_004106108.1| hypothetical protein Rumal_3009 [Ruminococcus albus 7]
 gi|315449910|gb|ADU23474.1| protein of unknown function DUF150 [Ruminococcus albus 7]
          Length = 181

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ + QP+ +E+      +   +E     L++ +++ DG +T+ DCE  ++  + ILD  
Sbjct: 17  VAGLAQPLADELGLFLWDVRFEKEGATWYLRVLIDK-DGGVTMEDCENFTRPFNKILDEA 75

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLIGKIMGTSETG 142
           + I   Y  E  SPG+ R + +   F    G VV   ++      +++ I  ++G  E  
Sbjct: 76  DPIPQSYVFECGSPGLGRELRKPIHFEVCIGDVVRVRLIRPDENGEREFIVGLVGYDEEE 135

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +  +   E       +  + +     +L
Sbjct: 136 KLIACQTLDENGDGAANVQFNLNDCAFVKL 165


>gi|332528892|ref|ZP_08404862.1| hypothetical protein HGR_03237 [Hylemonella gracilis ATCC 19624]
 gi|332041649|gb|EGI78005.1| hypothetical protein HGR_03237 [Hylemonella gracilis ATCC 19624]
          Length = 202

 Score =  124 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 76/182 (41%), Gaps = 37/182 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD------DGNMTLRDCEELSQAISP 78
           +  + +  +  + +  V+I        LL+I ++        +  + + DCE++++ +  
Sbjct: 12  LQEIAEQTVTGLGYELVEIE--RSAGGLLRITIDLPWTPGLHEQFVNVEDCEKVTRQLQY 69

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS------------- 125
           +L+VE I   + RLEVSSPGIDRP+  + DF R+ G V+   +                 
Sbjct: 70  VLEVEGI--EYKRLEVSSPGIDRPLRHEQDFERFAGQVIDVTLKAPIGAAALAGQDAAGG 127

Query: 126 ---GDKQKLIGKIMGTSETGFFL-----------EKEKRGEKDMNELQIAISFDSLLSAR 171
               +++K  G +    + G+ +           ++  +  +      +  + D L  AR
Sbjct: 128 KVAANRKKFRGTLEKAPQGGWQIVWSDEPAPKPGQRVSKKREPAPLQALGFTLDELRDAR 187

Query: 172 LI 173
           L 
Sbjct: 188 LA 189


>gi|222823265|ref|YP_002574838.1| conserved hypothetical protein (DUF150 domain protein)
           [Campylobacter lari RM2100]
 gi|254801701|sp|B9KEV2|RIMP_CAMLR RecName: Full=Ribosome maturation factor rimP
 gi|222538486|gb|ACM63587.1| conserved hypothetical protein (DUF150 domain protein)
           [Campylobacter lari RM2100]
          Length = 140

 Score =  124 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 12/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +++V+++ G + L DC  LS+ +SPI DVE  + 
Sbjct: 3   LEALCKEAGLSFYDDELVSENGKKIYRVYVQKE-GGVKLDDCARLSEILSPIFDVEPPVS 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSS G++R + +   F +    +V         +K+K+  KI+   +    LE 
Sbjct: 62  GEYFLEVSSCGLERKLSKIEHFAKSINELVKITTS----EKEKIEAKIVSVDDENITLEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
            K  EK        + F  +  AR  V
Sbjct: 118 LKTQEKT------TLKFSDIRKARTFV 138


>gi|91788289|ref|YP_549241.1| hypothetical protein Bpro_2424 [Polaromonas sp. JS666]
 gi|123164890|sp|Q12AU9|RIMP_POLSJ RecName: Full=Ribosome maturation factor rimP
 gi|91697514|gb|ABE44343.1| protein of unknown function DUF150 [Polaromonas sp. JS666]
          Length = 200

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 35/180 (19%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-----DGNMTLRDCEELSQAISPI 79
           +   I+  +  + +  V+I        LL++ ++       +  +   DCE++++ +  +
Sbjct: 3   LQETIEQTVTGLGYELVEIE--RTGGGLLRVTIDMPYVSGAEQFINAEDCEKVTRQLQFV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-----------GDK 128
           L+VE     + RLEVSSPGIDRP+  + DF R+ G +V   +                ++
Sbjct: 61  LEVEG--ADYSRLEVSSPGIDRPLRNEKDFERFAGELVDITLKAPIGVAASAGSAVSANR 118

Query: 129 QKLIGKIM------GTSETGFFLEKEKRGEKDMNELQIAIS---------FDSLLSARLI 173
           +K  G +       G +        E   +      +  +           D +  ARL 
Sbjct: 119 KKFRGTLERAAPKDGVAGWQIVWSDEPPVKPGQKVSKKKLPAPLQALGFTLDEIHQARLA 178


>gi|294815428|ref|ZP_06774071.1| Conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326443781|ref|ZP_08218515.1| ribosome maturation protein RimP [Streptomyces clavuligerus ATCC
           27064]
 gi|294328027|gb|EFG09670.1| Conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 165

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 9/153 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I L    +   L+I V+ +DG  TL  C ELS+AIS  L
Sbjct: 6   SERLRELLEPLVTAAGLDLEEIELARAGRRRQLRIVVDSEDGA-TLDACAELSRAISQKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + E  Y LEVSSPG DRP+     ++R  G +V   +     D  +L+ +++   
Sbjct: 65  DESDAMGEDEYVLEVSSPGADRPLTEHRHYVRATGRLVKLHL----ADGGELVARVLTVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  LE      +     ++   F  +  AR+
Sbjct: 121 DEGLDLEVPGVKGRKPTARRVT--FADIAKARV 151


>gi|160913531|ref|ZP_02076222.1| hypothetical protein EUBDOL_00007 [Eubacterium dolichum DSM 3991]
 gi|158434083|gb|EDP12372.1| hypothetical protein EUBDOL_00007 [Eubacterium dolichum DSM 3991]
          Length = 181

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     I  ++  V+ +       ++  +E KN +LQI + R DG M +  C E+S+ IS
Sbjct: 28  MEHNEKIKQLVSDVLGD-ELVLYDVAWHQEGKNKILQIAIMRKDGTMDIDTCAEVSEKIS 86

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I+  Y LEV SPG +R +          G  V  ++         + G ++ 
Sbjct: 87  AKLDEEDFIQSEYFLEVCSPGAERELKTYEQIKDAIGEFVYVKLKDPKAGMCDVKGTLLS 146

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    ++   +  K   E++IA    ++   RL V
Sbjct: 147 CEENSILIQYMDKAVKKKAEIEIA----NIALIRLSV 179


>gi|225874865|ref|YP_002756324.1| hypothetical protein ACP_3325 [Acidobacterium capsulatum ATCC
           51196]
 gi|259585657|sp|C1F695|RIMP_ACIC5 RecName: Full=Ribosome maturation factor rimP
 gi|225792684|gb|ACO32774.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 201

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 42/191 (21%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD----------------------- 60
           I S  Q V        V +      K+ +L+IF+E++                       
Sbjct: 8   IRSAAQRVASSHGLDVVDVEYQGGAKHRMLRIFIEKNAEERAKLAAQSSGRVETIEVHEE 67

Query: 61  ---DG-------NMTLRDCEELSQAISPILDVENIIEGH--YRLEVSSPGIDRPMVRKSD 108
              +G        +T  DC   S     +LDVE ++ G   Y LEVSSPG+DR +  ++D
Sbjct: 68  MPREGMNPEHFSGVTHEDCSAFSTDFGTLLDVEELMPGASEYTLEVSSPGLDRKLQSRAD 127

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE------KRGEKDMNELQIAI 162
           + R+ G +V           +   G++ G       L+        K  EK      + I
Sbjct: 128 YERFAGSLVKLSTFEPVNGNRHWQGRMAGLDGDTLRLDLTAMKQKGKGKEKKSAAETVEI 187

Query: 163 SFDSLLSARLI 173
           +  ++  A+LI
Sbjct: 188 ALGNVEKAQLI 198


>gi|120612039|ref|YP_971717.1| hypothetical protein Aave_3385 [Acidovorax citrulli AAC00-1]
 gi|226703802|sp|A1TSK5|RIMP_ACIAC RecName: Full=Ribosome maturation factor rimP
 gi|120590503|gb|ABM33943.1| protein of unknown function DUF150 [Acidovorax citrulli AAC00-1]
          Length = 202

 Score =  124 bits (311), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 42/187 (22%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD------------------DGNMTL 66
           +  +++  +  + +  V+I        LL+I ++                    +  +T+
Sbjct: 3   LQQIVEQTVAGLGYDLVEIE--RSAGGLLRITIDLPWQPPVEGAASDAAAPAGPEAFVTV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DCE++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G V+   +    G
Sbjct: 61  EDCEKVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRHEQDFQRFAGEVIDITLKAPIG 118

Query: 127 D---------KQKLIGKIMGTSETGFFL-----------EKEKRGEKDMNELQIAISFDS 166
           D         ++K  G +      G+ +           +K  +         +  + D 
Sbjct: 119 DAAAGQVNANRKKFRGTLERAETGGWQIVWSDEPPPKPGQKVSKKRVPAPLQALGFTLDE 178

Query: 167 LLSARLI 173
           L  ARL 
Sbjct: 179 LRDARLA 185


>gi|149926273|ref|ZP_01914535.1| hypothetical protein LMED105_02033 [Limnobacter sp. MED105]
 gi|149825091|gb|EDM84303.1| hypothetical protein LMED105_02033 [Limnobacter sp. MED105]
          Length = 171

 Score =  124 bits (311), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)

Query: 32  VIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           VI  +      I    E N LL+I ++   G +T+ DCE++S  ++ +  VEN+   + R
Sbjct: 31  VISSLGLEVADIE--REGNGLLRIMIDSPTG-VTVEDCEKVSHQLTHLFTVENV--NYER 85

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           LE+SSPG+DR + RK DF R+    V+ +   +  ++++  G +    E  + +     G
Sbjct: 86  LEISSPGVDRVLRRKKDFERFLDQEVSLKFKRAINNQKQFKGVLQKGKEQAWGVLVTPDG 145

Query: 152 EKDMNELQIAISFDSLLSARLI 173
            K+     +      L  ARL+
Sbjct: 146 -KNAEPYLLDFEITDLAGARLV 166


>gi|171463769|ref|YP_001797882.1| protein of unknown function DUF150 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|226696205|sp|B1XV91|RIMP_POLNS RecName: Full=Ribosome maturation factor rimP
 gi|171193307|gb|ACB44268.1| protein of unknown function DUF150 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 163

 Score =  124 bits (311), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 16/157 (10%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD--GNMTLRDCEELSQAISPILDVE 83
             VI   +E + +  V+I    E   LL++ +E  D    +T+ DCE++S  +S  L VE
Sbjct: 4   QQVISAELENLGYSLVEIE--REAGGLLRVTIENPDYERLITVLDCEKVSHQLSYTLPVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT----- 138
           NI   + RLE+SSPG+DRP+   +DF R+ G  V  ++ +++G+++   G++ G      
Sbjct: 62  NI--PYERLEISSPGLDRPVKSAADFQRFAGMEVDLKLRVAAGNRKNFRGELQGLLSGEL 119

Query: 139 --SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +  F L  E     D    Q+  S   +   RL+
Sbjct: 120 NSPDAKFGLVFEGA---DGQSSQLEFSLAEVDKTRLV 153


>gi|328885405|emb|CCA58644.1| conserved hypothetical protein [Streptomyces venezuelae ATCC 10712]
          Length = 168

 Score =  124 bits (311), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 6/153 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++   +    +I +       LL+I V+ D+G + L  C ELS+AIS  L
Sbjct: 6   SDRLRGLVEPLVAAKNLDLEEIEVSRAGRRGLLRIVVDSDEG-VELDACAELSRAISEKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + EG Y LEVSSPG DRP+ +   ++R  G +V  ++  S G  ++L+ +I+   
Sbjct: 65  DETDAMGEGEYVLEVSSPGADRPLTQHRHYVRATGRLVKLQL-SSDGAAEELVARIVAVD 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E G  LE      +     ++   F  +  AR+
Sbjct: 124 EDGLDLEVPGVKGRKPTARRVE--FADVAKARV 154


>gi|260221429|emb|CBA29983.1| UPF0090 protein Daci_2988 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 199

 Score =  124 bits (311), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 39/184 (21%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-----------DGNMTLRDCEELS 73
           +  +++  +  + +  V+I        LL+I ++             +  + + DCE+++
Sbjct: 3   LQEIVEQTVAGLGYDLVEIE--RSAGGLLRITIDLPWVAPVEGQPVSEQFVNVEDCEKVT 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------- 126
           + +   L+V+ +   + RLEVSSPGIDRP+    DF R+ GHV+   +    G       
Sbjct: 61  RQLQFALEVDGV--EYKRLEVSSPGIDRPLRHTQDFERFAGHVIDITLKAPMGAAANGQV 118

Query: 127 --DKQKLIGKIMGT----SETGFFL-----------EKEKRGEKDMNELQIAISFDSLLS 169
             +++K  G +         TG+ +           +K  +         +  +FD L  
Sbjct: 119 SANRKKFRGTLERVPAADGSTGWQIVWSDAPEVKPGQKVSKKRVPPPLQALGFAFDELRD 178

Query: 170 ARLI 173
           ARL 
Sbjct: 179 ARLA 182


>gi|160898429|ref|YP_001564011.1| hypothetical protein Daci_2988 [Delftia acidovorans SPH-1]
 gi|226703492|sp|A9C1Z0|RIMP_DELAS RecName: Full=Ribosome maturation factor rimP
 gi|160364013|gb|ABX35626.1| protein of unknown function DUF150 [Delftia acidovorans SPH-1]
          Length = 192

 Score =  124 bits (311), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 36/181 (19%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-----DGN-------MTLRDCEEL 72
           +  +++  +  + +  V+I        LL++ ++       +G        +T+ DCE++
Sbjct: 3   LQQIVEQTVTGLGYDLVEIE--RSAGGLLRVTIDLPWQPPVEGGPVVPEQFVTVEDCEKI 60

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------ 126
           ++ +   L+V+     + RLEVSSPGIDRP+  + DF R+ G V+   +    G      
Sbjct: 61  TRQLQFALEVDG--ADYTRLEVSSPGIDRPLRHEQDFTRFVGEVIDLTLKEPIGAAAEGQ 118

Query: 127 ---DKQKLIGKIMGTSETGFFL-----------EKEKRGEKDMNELQIAISFDSLLSARL 172
              +++K  G +    + G+ +           +K  +         +  + + L  ARL
Sbjct: 119 VSANRKKFRGTLERAEDGGWQIVWSDEPPVKPGQKVSKKRVPAPLQALGFTLEELREARL 178

Query: 173 I 173
            
Sbjct: 179 A 179


>gi|88597399|ref|ZP_01100634.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88190460|gb|EAQ94434.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 147

 Score =  124 bits (311), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 17/153 (11%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERD------DGNMTLRDCEELSQAISPILD 81
           ++ + +E++       L  E    + +++V +          + L DC  LS+ +SPI D
Sbjct: 3   LEALCKEVNLELYDSELTSENGKKIYRVYVMKPLDEKGERRGVNLDDCARLSEILSPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE  + G Y LEVSS G++R + +   F +    +V        G+K+K+  KI+   + 
Sbjct: 63  VEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVKITT----GEKEKIEAKIISVEDE 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE  +  EK        I+F+ +  AR  +
Sbjct: 119 NITLENLENKEKT------TINFNDIKKARTFI 145


>gi|118474205|ref|YP_892625.1| hypothetical protein CFF8240_1491 [Campylobacter fetus subsp. fetus
           82-40]
 gi|261885775|ref|ZP_06009814.1| hypothetical protein CfetvA_11986 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|259585736|sp|A0RQZ2|RIMP_CAMFF RecName: Full=Ribosome maturation factor rimP
 gi|118413431|gb|ABK81851.1| hypothetical protein CFF8240_1491 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 140

 Score =  124 bits (311), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 32  VIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           ++ +         ++ E   ++ ++++ + +G ++L +CE +S+ +SPI DV   + G +
Sbjct: 7   LVSQCGVDLYDAEVVNENGRVIYRVYITK-NGGVSLEECEAVSKLLSPIYDVMPPVSGEW 65

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            LEVSSPG++R + +   F    G      +     DK ++ GKI+   +    +  +  
Sbjct: 66  ILEVSSPGLERKLSKIEHFTLSIGEFAKIIL----NDKTEIKGKIVSVKDDNICINIK-- 119

Query: 151 GEKDMNELQIAISFDSLLSAR 171
                N   I + F+++  A+
Sbjct: 120 -----NNESIEVKFENIKKAK 135


>gi|315452832|ref|YP_004073102.1| ribosome maturation factor rimP [Helicobacter felis ATCC 49179]
 gi|315131884|emb|CBY82512.1| ribosome maturation factor rimP [Helicobacter felis ATCC 49179]
          Length = 156

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 13/153 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + ++++  ++ +      ++ L+E    +L+I ++  +G  +L  C+E S  ISP+L
Sbjct: 3   TSQLETLLENTLQSIGCALYDVAFLKENQTDILRISIKALEGPTSLDVCQEASLLISPLL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DV   I G Y LEVSS G++R + ++  F    G ++ C+I+    D  +L G +     
Sbjct: 63  DVHAPIAGSYTLEVSSMGLERTLSKRRHFELSIGELIECKIL----DNTRLRGTLEALEG 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               L  E   +        ++    +  A+ I
Sbjct: 119 ENILLNIEGTTQ--------SLPLAQIKRAKTI 143


>gi|307297717|ref|ZP_07577523.1| protein of unknown function DUF150 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916977|gb|EFN47359.1| protein of unknown function DUF150 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 177

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 7/156 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L  ++  +   V   + +    + L    K  L++I +++ DG +++ DCE  S     
Sbjct: 28  DLKKELFELANEVASNLGYSIYDLGLGRRGKKRLVKITIDKLDGYVSISDCESFSADFGR 87

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  +++   Y L V SPG++R +    D++R+ G      +         LIGKI+  
Sbjct: 88  ALDSADLVPFSYDLVVESPGLERALRDLKDYVRFTGEKAKVILKEPIEGVSVLIGKIISC 147

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +E  + G+      +IA  F ++  A L +
Sbjct: 148 ENDVVTVESSENGK------EIAFHFSNVKRANLKL 177


>gi|152993548|ref|YP_001359269.1| hypothetical protein SUN_1969 [Sulfurovum sp. NBC37-1]
 gi|166980517|sp|A6QBQ3|RIMP_SULNB RecName: Full=Ribosome maturation factor rimP
 gi|151425409|dbj|BAF72912.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 142

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + + I  ++E        I    E    + ++ + +  G + L  C  +S  +SP LDV 
Sbjct: 3   LEAQISKIVEANGAALYDIETANEFDETIYRVLITK-TGGVNLDLCATISNELSPFLDVH 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             + GHYRLEVSSPGI+R + +   F    G  V  +++       KL G +    + G 
Sbjct: 62  PPMNGHYRLEVSSPGIERKLSKPIHFQNAIGEKVKVKLL----GGDKLKGVLKAADDKGI 117

Query: 144 FLEKEKRGE 152
            +E ++  E
Sbjct: 118 TVETKQGEE 126


>gi|22536560|ref|NP_687411.1| hypothetical protein SAG0377 [Streptococcus agalactiae 2603V/R]
 gi|76786908|ref|YP_329097.1| hypothetical protein SAK_0451 [Streptococcus agalactiae A909]
 gi|76798054|ref|ZP_00780311.1| UPF0090 protein SP0552 (SP14.3) [Streptococcus agalactiae 18RS21]
 gi|77406351|ref|ZP_00783413.1| conserved hypotehtical protein [Streptococcus agalactiae H36B]
 gi|77408760|ref|ZP_00785490.1| conserved hypotehtical protein [Streptococcus agalactiae COH1]
 gi|77411665|ref|ZP_00788005.1| conserved hypotehtical protein [Streptococcus agalactiae CJB111]
 gi|77414448|ref|ZP_00790599.1| conserved hypotehtical protein [Streptococcus agalactiae 515]
 gi|91208361|sp|Q3K306|RIMP_STRA1 RecName: Full=Ribosome maturation factor rimP
 gi|22533394|gb|AAM99283.1|AE014208_23 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
 gi|76561965|gb|ABA44549.1| conserved hypothetical protein [Streptococcus agalactiae A909]
 gi|76586613|gb|EAO63114.1| UPF0090 protein SP0552 (SP14.3) [Streptococcus agalactiae 18RS21]
 gi|77159493|gb|EAO70653.1| conserved hypotehtical protein [Streptococcus agalactiae 515]
 gi|77162309|gb|EAO73280.1| conserved hypotehtical protein [Streptococcus agalactiae CJB111]
 gi|77172605|gb|EAO75744.1| conserved hypotehtical protein [Streptococcus agalactiae COH1]
 gi|77175020|gb|EAO77827.1| conserved hypotehtical protein [Streptococcus agalactiae H36B]
          Length = 127

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVR 105
             + +L I +++  G +T+ D  +L+  +SP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GGDYVLSILIDKP-GGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  S    +   G ++        ++   +         + I + 
Sbjct: 61  AEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDKTRHK----TVDIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 TVAKARLAV 125


>gi|239944686|ref|ZP_04696623.1| hypothetical protein SrosN15_27072 [Streptomyces roseosporus NRRL
           15998]
 gi|239991149|ref|ZP_04711813.1| hypothetical protein SrosN1_27849 [Streptomyces roseosporus NRRL
           11379]
 gi|291448147|ref|ZP_06587537.1| UPF0090 protein [Streptomyces roseosporus NRRL 15998]
 gi|291351094|gb|EFE77998.1| UPF0090 protein [Streptomyces roseosporus NRRL 15998]
          Length = 167

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 7/153 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I +       +L++ V+ D+G + L  C ELS+AIS  L
Sbjct: 6   SERLRGLLEPLVSAQELDLEEIEVSRAGRRGVLRVIVDSDEG-VELDACAELSRAISQKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + EG Y LEVSSPG DRP+     ++R  G +    +        +L+ +I+   
Sbjct: 65  DETDAMGEGEYVLEVSSPGADRPLTEHRHYVRATGRLARFHLTG--DGSGELVARILAVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E G  LE    G K        ++FD +  AR+
Sbjct: 123 EDGLDLEV--PGVKGRKPTARRLAFDEIAKARV 153


>gi|312865482|ref|ZP_07725709.1| conserved hypothetical protein [Streptococcus downei F0415]
 gi|311099000|gb|EFQ57217.1| conserved hypothetical protein [Streptococcus downei F0415]
          Length = 134

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 8/136 (5%)

Query: 42  QISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIEGHYRLEVSSPG 98
            +   +   + +L I V++ +G +T+ D  EL+  ISP+LD    +     Y LE+SSPG
Sbjct: 2   DVEYEKLGADYVLSILVDKPEG-ITVDDTAELTDIISPLLDTIKPDPFPSQYMLEISSPG 60

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNEL 158
           ++RP+          G  +   +  +    +   G ++        LE   +  K     
Sbjct: 61  LERPLKTAESLEAAIGSYINVSLYKAIDKVKVFEGDLLDFDGQTLTLEYLDKTRKK---- 116

Query: 159 QIAISFDSLLSARLIV 174
           Q+ I + ++  AR+ V
Sbjct: 117 QVEIPYSTVAKARMAV 132


>gi|224438171|ref|ZP_03659106.1| hypothetical protein HcinC1_09335 [Helicobacter cinaedi CCUG 18818]
 gi|313144616|ref|ZP_07806809.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129647|gb|EFR47264.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 156

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 23/164 (14%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER----------DDGNMTLRDC 69
           L+   +  I+ +   +S     I  L+E +  +L+I + +          D   ++L+DC
Sbjct: 2   LSAQTTQKIERLAASLSLYIYDIDFLKEDERHILRISITKKAPMQNLSSKDSNAVSLQDC 61

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + LS+ +SP+LDVE+I   +Y LEVSSPG+DR + +   +    G +++ +++    DK 
Sbjct: 62  QILSELLSPLLDVEHINMDNYHLEVSSPGLDRILKKPQHYAFSLGEMISLKLI----DKS 117

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            L G +   ++T   L  +K          I I F S+  A++I
Sbjct: 118 SLQGILENVNDTEIALLVDKEK--------INIPFSSIKKAKVI 153


>gi|257784635|ref|YP_003179852.1| hypothetical protein Apar_0832 [Atopobium parvulum DSM 20469]
 gi|257473142|gb|ACV51261.1| protein of unknown function DUF150 [Atopobium parvulum DSM 20469]
          Length = 164

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 9/164 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN---MTLRDCEE 71
             + G+   I S ++          V + ++   KN L+++ ++ DD     ++L +  +
Sbjct: 1   MQNEGVTQKILSALEQAALNHHIDIVDVEIVGSSKNPLVRVRIDHDDETEETISLDEVAQ 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            +  IS  +D  +     + LEVSSPG+ RP+ R  DF+R+ G  V  +   ++  ++K 
Sbjct: 61  ETSWISETIDELDPFPASFTLEVSSPGMARPLRRAKDFVRFAGQEVQLQTT-ATEGRRKF 119

Query: 132 IGKIMGTSETGFFLEKEKR----GEKDMNELQIAISFDSLLSAR 171
            G ++G   T   ++ E         ++ +  I  +FD L SA+
Sbjct: 120 TGTLLGIEGTTISIQTEDEVCTIDLSELKKCVIKPAFDFLTSAK 163


>gi|218282330|ref|ZP_03488620.1| hypothetical protein EUBIFOR_01202 [Eubacterium biforme DSM 3989]
 gi|218216703|gb|EEC90241.1| hypothetical protein EUBIFOR_01202 [Eubacterium biforme DSM 3989]
          Length = 173

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 8/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++   I+ V+ E       +  +  +   LL++ VE++DG M L  C   S  I  +LD
Sbjct: 23  DNLKEWIEEVLNENGCHLYDLEWITNQGTPLLRVSVEKEDGTMDLDTCASCSDVIGQMLD 82

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            ++     Y LEV SPG +R +    +  R  G  V  ++        ++IG ++  +E 
Sbjct: 83  EKDWYSHEYMLEVCSPGAERELRTDEEVQRAVGKYVFVKMKDPKQGLDQVIGDLVEATEN 142

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
              +    +        +I I   ++    LI+T
Sbjct: 143 DVTISYRDKTRTK----KITIEKSNIQ---LIMT 169


>gi|221195857|ref|ZP_03568910.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
 gi|221184331|gb|EEE16725.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
          Length = 164

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 13/160 (8%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--DDG-NMTLRDCEELSQA 75
           G    I SV++          V + ++   K  ++++ ++   +DG  ++L +    +  
Sbjct: 5   GSVERIISVLEERALGHDIDIVDVEVVGSAKAPVVRVRIDHADEDGKTISLDEVAAETGW 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           IS  LD  ++  G + LEVSSPG+DRP+ R  DF R++G  V+ +   +   +++  GK+
Sbjct: 65  ISDALDEIDVFPGSFTLEVSSPGMDRPLRRVRDFERFSGSQVSLQTT-ALEGRRRYTGKL 123

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +G  E    LE +         +   I    +    L  T
Sbjct: 124 LGIQENIVSLESDG--------MTYDIPLTEIKKCTLKPT 155


>gi|295426317|ref|ZP_06818976.1| protein of hypothetical function DUF150 [Lactobacillus amylolyticus
           DSM 11664]
 gi|295063990|gb|EFG54939.1| protein of hypothetical function DUF150 [Lactobacillus amylolyticus
           DSM 11664]
          Length = 159

 Score =  122 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 8/158 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDD-GNMTLRDCEELSQAISP 78
           +   I S I+P+I++     V I  ++EK    L+I+V++D  G + + +   LS+ +S 
Sbjct: 4   ITDLIRSEIEPIIDQRGDEFVDIEYVKEKGQNYLRIYVDKDQLGGIDINEIAYLSELVSE 63

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD    + +   Y L +SSPG + P+    D+ +  G  V   +      K+   G + 
Sbjct: 64  KLDSLDPDPLPDPYVLGLSSPGAEHPIKSAKDWTKARGEYVHVGLYQKIDGKKIYEGTLK 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             S+    LE + +  +      + I    + + R  +
Sbjct: 124 SYSDEEIELEIKIKTRRK----TLNIPRKLIANIRFAI 157


>gi|121594901|ref|YP_986797.1| hypothetical protein Ajs_2563 [Acidovorax sp. JS42]
 gi|120606981|gb|ABM42721.1| protein of unknown function DUF150 [Acidovorax sp. JS42]
          Length = 219

 Score =  122 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 38/183 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMTLRDCE 70
           +  +++  +  + +  V+I        LL+I ++                +  +T+ DCE
Sbjct: 25  LQQIVEQTVAGLGYDLVEIE--RSAGGLLRITIDLVWVPPTDEVSAAVGAEQFITVEDCE 82

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---- 126
           ++++ +   L+VE +   + RLEVSSPGIDR +  ++DF R+ G V+   +    G    
Sbjct: 83  KVTRQLQFALEVEGV--DYTRLEVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAG 140

Query: 127 -----DKQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSA 170
                +++K  G +      G+ +               +         +  + D L  A
Sbjct: 141 GQVHANRKKFRGALERADSGGWQIVWSDEPPVKPGQRISKKRVPAPLQALGFTLDELREA 200

Query: 171 RLI 173
           RL 
Sbjct: 201 RLA 203


>gi|239982634|ref|ZP_04705158.1| hypothetical protein SalbJ_24601 [Streptomyces albus J1074]
 gi|291454475|ref|ZP_06593865.1| UPF0090 protein [Streptomyces albus J1074]
 gi|291357424|gb|EFE84326.1| UPF0090 protein [Streptomyces albus J1074]
          Length = 174

 Score =  122 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L+  +  +I+P++        ++++    K  +L++ V+ DDG + L  C +LS+ +S
Sbjct: 3   TTLSDRLRELIEPLVSSQELDLEEVTVTPAGKRRVLRVVVDSDDG-VQLDTCADLSRTVS 61

Query: 78  PILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             LD  +++ E  Y LEV+SPG DRP+     F+R  G +V   +       ++L+ +I 
Sbjct: 62  ARLDETDLMGESEYVLEVTSPGADRPLSEYRHFVRATGRLVKFHLT-PDAGAEELVARIE 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              E G  LE    G K     Q  +    +  AR+
Sbjct: 121 AVDEEGLDLEV--PGVKGRKPKQRRLPLKDVARARV 154


>gi|303248241|ref|ZP_07334504.1| protein of unknown function DUF150 [Desulfovibrio fructosovorans
           JJ]
 gi|302490379|gb|EFL50290.1| protein of unknown function DUF150 [Desulfovibrio fructosovorans
           JJ]
          Length = 180

 Score =  122 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 62/160 (38%), Gaps = 13/160 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDD--------GNMTLRDCEELS 73
             I  +I P +         + L    +  L++++++  D          +T+ +C  +S
Sbjct: 9   EKIRELISPFLTAKGLAVWGVELAASGHRQLVRLYLDLADDVVRTPERRGVTIDECATVS 68

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +  +L++E++  G Y LEVSSPG  R          + G  +  ++      +++  G
Sbjct: 69  RHLGTLLEMEDLFHGPYVLEVSSPGFGRRFFSADQLPAYIGEAIEAKLAAPRDGRKRFRG 128

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           K+     +   +              ++  FD     RLI
Sbjct: 129 KLSAVDGSRVTMTVN----PGPQAFSLSFEFDEADKVRLI 164


>gi|300312900|ref|YP_003776992.1| hypothetical protein Hsero_3606 [Herbaspirillum seropedicae SmR1]
 gi|300075685|gb|ADJ65084.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 164

 Score =  122 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 71/160 (44%), Gaps = 17/160 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-------RDDGNMTLRDCEELSQAI 76
            +  +I+  +  + +  V     +    L+++F++        +  ++T+ DCE+ +  +
Sbjct: 2   QLLELIESTLSGLGYELV--EFEKAPRGLVRVFIDFPFDPEAEEARSITVEDCEKATHQL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIG 133
             +  VEN++    RLEVSSPG+DRP+ + SDF+R+       ++ +       ++   G
Sbjct: 60  LHVFTVENVLYE--RLEVSSPGLDRPLKKFSDFVRFVDCEAVIKLRVPLPGTSNRKTYEG 117

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +         LE E     D +   +  +   +  A L+
Sbjct: 118 VLREPEGEELVLEFEAN---DGSAAVLNFTLADVDKAHLV 154


>gi|254423906|ref|ZP_05037624.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196191395|gb|EDX86359.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 154

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 2/135 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERD-DGNMTLRDCEELSQAISP 78
           L   +  +  PV + +    V       +   +L++ V      +  L DCE LS A++ 
Sbjct: 5   LIPQVLELAAPVADRVGLEIVDAVFQTNQSPPVLRLDVRNPTQEDTGLNDCERLSIALTE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  N+I   Y LEVSSPG+   +    DF  + G  V   +      KQ   G ++G 
Sbjct: 65  ALDESNLIPDAYVLEVSSPGVSDVLSSDRDFKVFKGFPVEVRLSEPYKSKQIWRGSLIGR 124

Query: 139 SETGFFLEKEKRGEK 153
            +    L  + R  K
Sbjct: 125 DDDKLTLNLKGRPVK 139


>gi|33596481|ref|NP_884124.1| hypothetical protein BPP1860 [Bordetella parapertussis 12822]
 gi|51316795|sp|Q7W9A7|RIMP_BORPA RecName: Full=Ribosome maturation factor rimP
 gi|33566250|emb|CAE37161.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 168

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 16/161 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R DG + + DCE++S+ +S + +V
Sbjct: 2   ADLFALTEEALAGMDIELVDVE--RAAMGLLRVTIDRVDG-VRIEDCEQVSRQLSHVYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           ENI   + RLEV SPG+DRP+  +++F R+ G  +  ++  +   ++   G +      G
Sbjct: 59  ENI--DYKRLEVGSPGVDRPLRNEAEFRRFAGERIEIKLREALDGRKVFSGTLRAPEADG 116

Query: 143 FFLEKEKRG-----------EKDMNELQIAISFDSLLSARL 172
              + +  G            K  +   ++ + D +  A+L
Sbjct: 117 ASGQDDTAGAGKAVFGLEFEAKKNDIQVLSFTLDDIERAKL 157


>gi|332283700|ref|YP_004415611.1| hypothetical protein PT7_0447 [Pusillimonas sp. T7-7]
 gi|330427653|gb|AEC18987.1| hypothetical protein PT7_0447 [Pusillimonas sp. T7-7]
          Length = 164

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 16/159 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            DI ++ Q  I  M    V +        LL++ ++R +G + + DCE++S+ +S + +V
Sbjct: 2   ADIFALTQEAIAGMDVELVDVE--RAPLGLLRVTIDRAEG-VRIEDCEQVSKHLSRVFEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET- 141
           ENI   + RLEV SPGIDRP+ R +DF+R+    V  ++  +  +++   G +   SE  
Sbjct: 59  ENI--DYKRLEVGSPGIDRPLKRVADFIRFANERVEIKLREAIDNRKVYAGVLR-VSENV 115

Query: 142 --------GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                    F LE E    K+  ++ +  +FD +  A+L
Sbjct: 116 ASDPSANPVFGLELEPTSRKEPAQV-LDFAFDDVDRAKL 153


>gi|293400741|ref|ZP_06644886.1| putative SP14.3 protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305767|gb|EFE47011.1| putative SP14.3 protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 155

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     I  +I+P++ +       +S  +E KN +LQ+ + R DG+M +  C  +S+ IS
Sbjct: 1   MDGLSKIKELIKPLLAQEDIELYDVSWQQEGKNRILQVAIMRKDGSMDIDTCAAMSEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I   Y LEV SPG +R +  ++         V  ++         + G +  
Sbjct: 61  EKLDEVDMIASEYFLEVCSPGAERELKDETQIQDALDEYVYVKLKNPKAGMDAVKGYLRA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E   +  K     +I I  D++   RL V
Sbjct: 121 YENGDITMEYMDKAVKK----KITIDGDNIALIRLSV 153


>gi|152990172|ref|YP_001355894.1| hypothetical protein NIS_0423 [Nitratiruptor sp. SB155-2]
 gi|167012920|sp|A6Q228|RIMP_NITSB RecName: Full=Ribosome maturation factor rimP
 gi|151422033|dbj|BAF69537.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 142

 Score =  122 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAIS 77
           M L  +I      ++E    +   I  + ++   + ++ +   +G + L+ C E+S  IS
Sbjct: 1   MSLEQEIKQ----IVESCGAKLYDIETVSDRGKTIYRVTITAPEG-VDLQKCVEISNLIS 55

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDV   + G Y LEVSSPG++R + + S F    G  V         D + + G +  
Sbjct: 56  PLLDVHPPVSGDYNLEVSSPGVERKLKKPSHFEHSVGEKVRVT----KNDGETIEGVLSD 111

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +    L+ +           I I  D +  A+ I
Sbjct: 112 FRDHTLTLQTKNG--------PIEIPLDQITYAKTI 139


>gi|218960601|ref|YP_001740376.1| hypothetical protein CLOAM0262 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729258|emb|CAO80169.1| conserved hypothetical protein [Candidatus Cloacamonas
           acidaminovorans]
          Length = 156

 Score =  122 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 71/152 (46%), Gaps = 11/152 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  + + + +EM      I   +  K  ++ +++ +  G +TL +C   S A+   L+
Sbjct: 6   AQVEEIARKICQEMHLAVYDIEEKMSGKGRIITVYLTK-IGGVTLDECAAFSNALGKELE 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           + ++I   Y LEVSSPG++RP+  KS ++      VA +   +  +++ ++G +   ++ 
Sbjct: 65  IFDLIPERYFLEVSSPGLERPLKLKSHYVSAINEKVAVQ-FQAGEERKSIMGTLTEVNQD 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              ++               I F S++ A+ +
Sbjct: 124 TIVIDDRGSVT--------EIPFKSIIRAKTV 147


>gi|124002856|ref|ZP_01687708.1| 15 kDa protein [Microscilla marina ATCC 23134]
 gi|123992084|gb|EAY31471.1| 15 kDa protein [Microscilla marina ATCC 23134]
          Length = 152

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 80/158 (50%), Gaps = 9/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++++I+  +E   +  + + L  +K    L + ++ D G +++  C  LS+ + 
Sbjct: 1   MNQEEKLTTLIKEHLEP-EYFLIDVILKNQKPKAKLTVLIDGDQG-VSIDRCATLSRWLG 58

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             ++ EN+IEG Y LEVSSPG+D P+  +  +++  G  V   +    G  +   G +  
Sbjct: 59  KYIEEENLIEGAYTLEVSSPGVDLPLKNQRQYIKNIGRKVKVSLNE--GGNK--TGVLEK 114

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             +    ++ EK+G+    + +  I FD ++  +++++
Sbjct: 115 VEDKLIVIQPEKKGKIIPEKEE--IPFDQIMKTKVMIS 150


>gi|328479977|gb|EGF49014.1| hypothetical protein AAULR_12702 [Lactobacillus rhamnosus MTCC
           5462]
          Length = 119

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 55  IFVERDDGNMTLRDCEELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           +++++  G +TL +C  +S+A+S  LD    + I   Y LEVSSPG +RP+ R++D+ + 
Sbjct: 1   VYIDK-SGGITLDECVLVSEALSEQLDAINPDPIPQQYFLEVSSPGAERPLKRETDYEQA 59

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  +   +      K+   G +         L  + +  K        I    + SARL
Sbjct: 60  IGDYIHVSLFKKLDGKKVFEGTLKDLKPDQLTLTVKDKSRKFDQ----VIDRKLIASARL 115

Query: 173 IV 174
            +
Sbjct: 116 AI 117


>gi|58337538|ref|YP_194123.1| hypothetical protein LBA1260 [Lactobacillus acidophilus NCFM]
 gi|75357528|sp|Q5FJN2|RIMP_LACAC RecName: Full=Ribosome maturation factor rimP
 gi|58254855|gb|AAV43092.1| hypothetical protein LBA1260 [Lactobacillus acidophilus NCFM]
          Length = 158

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 7/153 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD-- 81
           +  V++ +I+E     V +  ++EK+   L+I+V+R+   + + +   LS+ IS  LD  
Sbjct: 8   VRPVVESIIDEHGDMLVNMEYIKEKSQNYLRIYVDREPNGIDIDEIAVLSELISEKLDTL 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG +RP+  K+D+ +     +   +     DK+   G +   ++ 
Sbjct: 68  DPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIEDKKMYEGTLKSYNDD 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE + +  +      + +    + + R  +
Sbjct: 128 EIILEVKDKTRRK----TLTVPRKLIANIRFAI 156


>gi|268678891|ref|YP_003303322.1| hypothetical protein Sdel_0250 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616922|gb|ACZ11287.1| protein of unknown function DUF150 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 142

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 14/147 (9%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +  +IE          ++ E    + +I++   +G + L  C E+S+ +SPI DVE 
Sbjct: 4   TEQLIKIIESCGVSLYDTEVVSEFDKKIFRIYITSKEG-INLDKCAEVSRILSPIFDVEP 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +EG Y  EVSSPGI+R +++   F    G  V  ++     +K+K IG + G +     
Sbjct: 63  PLEGEYLFEVSSPGIERKLLKPEHFSVSVGEKVKIKLK----NKEKFIGILEGFANNTLQ 118

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSAR 171
           +  E   +         I+ D +  AR
Sbjct: 119 VRVENEVK--------EIALDDIEKAR 137


>gi|33592373|ref|NP_880017.1| hypothetical protein BP1245 [Bordetella pertussis Tohama I]
 gi|33602224|ref|NP_889784.1| hypothetical protein BB3248 [Bordetella bronchiseptica RB50]
 gi|51316792|sp|Q7VYR4|RIMP_BORPE RecName: Full=Ribosome maturation factor rimP
 gi|51316959|sp|Q7WHG0|RIMP_BORBR RecName: Full=Ribosome maturation factor rimP
 gi|33572018|emb|CAE41541.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|33576662|emb|CAE33740.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
 gi|332381789|gb|AEE66636.1| hypothetical protein BPTD_1235 [Bordetella pertussis CS]
          Length = 168

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 16/161 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R DG + + DCE++S+ +S + +V
Sbjct: 2   ADLFALTEEALAGMDIELVDVE--RAAMGLLRVTIDRVDG-VRIEDCEQVSRQLSRVYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           ENI   + RLEV SPG+DRP+  +++F R+ G  +  ++  +   ++   G +      G
Sbjct: 59  ENI--DYKRLEVGSPGVDRPLRNEAEFRRFAGERIEIKLREALDGRKVFSGTLRAPEADG 116

Query: 143 FFLEKEKRG-----------EKDMNELQIAISFDSLLSARL 172
              + +  G            K  +   ++ + D +  A+L
Sbjct: 117 ASGQDDTAGAGKAVFGLEFEAKKNDIQVLSFTLDDIERAKL 157


>gi|282861438|ref|ZP_06270503.1| protein of unknown function DUF150 [Streptomyces sp. ACTE]
 gi|282564096|gb|EFB69633.1| protein of unknown function DUF150 [Streptomyces sp. ACTE]
          Length = 165

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 9/153 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I +    +  +L++ V+ DDG + L  C ELS+ IS  L
Sbjct: 6   SDRLRGLLEPLVSAKELDLEEIEVSRAGRRRVLRVIVDSDDG-VELDTCAELSRTISETL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + EG Y LEVSSPG DRP+     ++R  G +    +     D  +L+ +I+G  
Sbjct: 65  DATDAMGEGEYVLEVSSPGADRPLTEHRHYVRATGRLAKLNL----ADGGELVARILGVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  LE      +     ++A  FD +  AR+
Sbjct: 121 DEGLDLEVPGVKGRKPTARRVA--FDEIAKARV 151


>gi|145593915|ref|YP_001158212.1| hypothetical protein Strop_1367 [Salinispora tropica CNB-440]
 gi|259586196|sp|A4X4N4|RIMP_SALTO RecName: Full=Ribosome maturation factor rimP
 gi|145303252|gb|ABP53834.1| protein of unknown function DUF150 [Salinispora tropica CNB-440]
          Length = 220

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 8/133 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  V++PV+ E  +   ++S+    +  ++Q+ V+  DG + L    ++S+A+S  LD
Sbjct: 40  ARLHEVVEPVVGEAGYDLEELSISRAGRRHVVQVIVD-ADGGIDLDAVADVSRAVSAALD 98

Query: 82  VE-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV-LSSGDKQKLIGKI 135
                  +I+ G Y+LEVSSPG+ RP+     + R  G +V   +        ++L G++
Sbjct: 99  AAEEARGDIVAGEYQLEVSSPGVSRPLTLPRHWRRNAGRLVRVTVRGGPDAGDRQLTGRV 158

Query: 136 MGTSETGFFLEKE 148
           +   +    LE +
Sbjct: 159 VEADDEQVVLETD 171


>gi|182435607|ref|YP_001823326.1| hypothetical protein SGR_1814 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776241|ref|ZP_08235506.1| Ribosome maturation factor rimP [Streptomyces cf. griseus
           XylebKG-1]
 gi|226695980|sp|B1VYN8|RIMP_STRGG RecName: Full=Ribosome maturation factor rimP
 gi|178464123|dbj|BAG18643.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326656574|gb|EGE41420.1| Ribosome maturation factor rimP [Streptomyces cf. griseus
           XylebKG-1]
          Length = 167

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 7/153 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I +       +L+I V+ ++G + L  C ELS+AIS  L
Sbjct: 6   SERLRGLLEPLVSAQQLDLEEIEVSRAGRRGVLRIIVDSEEG-VELDACAELSRAISEKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + EG Y LEVSSPG DRP+     ++R  G +    +  +     +L+ +I+   
Sbjct: 65  DETDAMGEGEYVLEVSSPGADRPLTEHRHYVRATGRLARFHL--AGDGSGELVARILAVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E G  LE    G K        ++FD +  AR+
Sbjct: 123 EEGLDLEV--PGVKGRKPTARRLAFDEIARARV 153


>gi|319744371|gb|EFV96731.1| hypothetical protein containing DUF150 [Streptococcus agalactiae
           ATCC 13813]
          Length = 127

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVR 105
             + +L I +++  G +T+ D  +L+  +SP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GGDYVLSILIDKP-GGITVEDTVQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  S    +   G ++        ++   +         + I + 
Sbjct: 61  AEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDKTRHK----TVDIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 TVAKARLAV 125


>gi|86605174|ref|YP_473937.1| hypothetical protein CYA_0456 [Synechococcus sp. JA-3-3Ab]
 gi|123507667|sp|Q2JX22|RIMP_SYNJA RecName: Full=Ribosome maturation factor rimP
 gi|86553716|gb|ABC98674.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 157

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 13/158 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVE--RDDGNMTLRDCEELSQAIS 77
           L   + S+ +P+   + +  VQ+     +   +L++ +     +   +  DCE +SQA+ 
Sbjct: 5   LIPQLESLARPLAARLGYELVQMVFHTNQYPPVLRVDIRPLDPEQETSHADCEAMSQALE 64

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I GHY LEVSSPGI   ++   DF+ + G  V   +      K    G ++G
Sbjct: 65  VELDRVDLIPGHYVLEVSSPGISNLLISDRDFVVFKGFAVEVTVDPPYKGKAVWSGHLLG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             E    L  + R        ++ +   S+   R++++
Sbjct: 125 RDEEKVALSLKGR--------RVQLPRASVQ--RVVLS 152


>gi|208434347|ref|YP_002266013.1| hypothetical protein HPG27_382 [Helicobacter pylori G27]
 gi|208432276|gb|ACI27147.1| hypothetical protein HPG27_382 [Helicobacter pylori G27]
          Length = 135

 Score =  121 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 5/129 (3%)

Query: 33  IEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           IE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+LDV + I+  Y 
Sbjct: 2   IESLGYLLYDVSLVKENEQHILRVSLKNPNGAVSLDICQQVSEIISPLLDVCDFIQDAYI 61

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           LEVSS G++R +     F    G  V  ++     +K+     +   ++     E E   
Sbjct: 62  LEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDANDLSADFELEDHA 117

Query: 152 EKDMNELQI 160
            K +    +
Sbjct: 118 IKSVEYKDL 126


>gi|57168691|ref|ZP_00367823.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|305432680|ref|ZP_07401841.1| conserved hypothetical protein [Campylobacter coli JV20]
 gi|57019972|gb|EAL56652.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|304444391|gb|EFM37043.1| conserved hypothetical protein [Campylobacter coli JV20]
          Length = 147

 Score =  121 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERD------DGNMTLRDCEELSQAISPILD 81
           ++ + +E++       L  E    + +++V +          + L DC  LS+ +SPI D
Sbjct: 3   LEALCKEVNLELYDSELTSENGKKIYRVYVMKPLDEKGERRGVNLDDCARLSEILSPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE  + G Y LEVSS G++R + +   F +    +V        G+K+K+  KI+   + 
Sbjct: 63  VEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVKITT----GEKEKIEAKIISVEDE 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              LE  +  EK        + F  +  AR  +
Sbjct: 119 NITLENLENQEKT------TLKFSDIKKARTFI 145


>gi|313681591|ref|YP_004059329.1| hypothetical protein Sulku_0462 [Sulfuricurvum kujiense DSM 16994]
 gi|313154451|gb|ADR33129.1| protein of unknown function DUF150 [Sulfuricurvum kujiense DSM
           16994]
          Length = 143

 Score =  121 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 17/154 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L  DI  +    +E +           E +N + ++ V    G ++L  C E +  IS
Sbjct: 1   MSLESDIKKM----VESIGLSLYDTAVFNENENTIFRVSVTAP-GGVSLDQCVEATHLIS 55

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDV   + G YRLEVSSPGI+R +     F +  G  V    V    +K+K  G+++ 
Sbjct: 56  PLLDVTPPVGGEYRLEVSSPGIERKLKTLDHFAQSVGEKVVFSTV----NKEKFDGEVVS 111

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                  +       K        + F S+  A+
Sbjct: 112 VENEEITI-------KTKEGETHTVPFRSISKAK 138


>gi|195977580|ref|YP_002122824.1| hypothetical protein Sez_0439 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|259586200|sp|B4U1E4|RIMP_STREM RecName: Full=Ribosome maturation factor rimP
 gi|195974285|gb|ACG61811.1| hypothetical protein Sez_0439 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 127

 Score =  121 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVR 105
             + +L I V++  G +T+ D  EL++ ISP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GSDYVLSILVDKASG-ITVEDTAELTELISPLLDTISPDPFPDQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  +    +   G ++        ++   +         + I + 
Sbjct: 61  AESLKAAVGSYINVSLYRAIDKVKVFQGDLVAFDGDILTIDYLDKTRHK----TVEIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 AVAKARLAV 125


>gi|238063379|ref|ZP_04608088.1| hypothetical protein MCAG_04345 [Micromonospora sp. ATCC 39149]
 gi|237885190|gb|EEP74018.1| hypothetical protein MCAG_04345 [Micromonospora sp. ATCC 39149]
          Length = 232

 Score =  121 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 23/168 (13%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +VI+PV+    +    +S+    +  ++++ V+  DG + L    ++S+A+S  LD
Sbjct: 41  ARLHAVIEPVVNAAGYDLEDVSVSRAGRRHVVRVIVD-ADGGINLDAVADVSRAVSAALD 99

Query: 82  VE-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI-----------VLSS 125
                  +I+ G Y+LEVSSPG+DRP+     + R  G +V                  +
Sbjct: 100 AAEEAGGDILAGEYQLEVSSPGVDRPLTLPRHWRRNVGRLVKVTARAVAPGPRAGDRQPT 159

Query: 126 GDKQKLIGKIMGTSETGFFLEKE----KRGEKDMNELQIAISFDSLLS 169
           GD+Q + G+++   +    LE +    +    ++   ++ + F  L  
Sbjct: 160 GDRQ-VTGRVVEADDERVVLETDSGRVEFSHAELGPGRVQVEFHRLDE 206


>gi|56752081|ref|YP_172782.1| hypothetical protein syc2072_d [Synechococcus elongatus PCC 6301]
 gi|81300832|ref|YP_401040.1| hypothetical protein Synpcc7942_2023 [Synechococcus elongatus PCC
           7942]
 gi|81561540|sp|Q5N0A8|RIMP_SYNP6 RecName: Full=Ribosome maturation factor rimP
 gi|123556488|sp|Q31LL6|RIMP_SYNE7 RecName: Full=Ribosome maturation factor rimP
 gi|56687040|dbj|BAD80262.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169713|gb|ABB58053.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 153

 Score =  121 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  + +P+ +++    VQ      +   +L++ +    G+  L DCE +S++    
Sbjct: 5   LIPAILDLARPIADDLDLEVVQAVFHTNQSPPILRLDIRSRVGDTGLEDCERMSRSFELA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  NII   Y LE+SSPG+   +    DFL + G  V       + D  +  G ++G  
Sbjct: 65  LDEANIIPDAYVLEISSPGLSDTLESDRDFLSFKGFPVQVTSRSPNDDTVEQQGTLLGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +L K  R         + I+   +L  +LI
Sbjct: 125 ADSVYLNKRGR--------TVRIARSQVLEVKLI 150


>gi|313901627|ref|ZP_07835064.1| protein of unknown function DUF150 [Thermaerobacter subterraneus
           DSM 13965]
 gi|313468108|gb|EFR63585.1| protein of unknown function DUF150 [Thermaerobacter subterraneus
           DSM 13965]
          Length = 153

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ + +P+ E+     + +    E     LQ  V+R+ G +T+ +C   S+A+ P+
Sbjct: 6   VEAAVAQLAEPLAEQRGLVLLDVEYRREGGRWFLQCVVDRE-GGVTMDECAAFSEALDPV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+  + +     +EV SPG+DR +    +F  + G  V          +++  G++ G  
Sbjct: 65  LEGVDGLAEDVVVEVMSPGLDRTLRNDREFAWFRGREVEVTTYRPVDGRRRFQGRLEGLE 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +           E    I  D++   +L V
Sbjct: 125 DGHVVV--------AGREGIHRIPRDAVAKTQLQV 151


>gi|257066113|ref|YP_003152369.1| hypothetical protein Apre_0606 [Anaerococcus prevotii DSM 20548]
 gi|256797993|gb|ACV28648.1| protein of unknown function DUF150 [Anaerococcus prevotii DSM
           20548]
          Length = 147

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 11/152 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  + +  IE + +  V I    +KN  +L  F+   DG +T+ DCE++S  + 
Sbjct: 1   MDLTKRLKEIFEADIENLGYELVDIEFKGQKNNKILTFFIYNKDG-ITIEDCEKVSAFLD 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  +II+  Y LEVSS  + RP+    D  R    ++  ++     D +  +GKI+ 
Sbjct: 60  EKLDEIDIIKDSYYLEVSSQDLSRPIKTDRDLERNKDELLKIKLK----DGEIFLGKIIN 115

Query: 138 TSET--GFFLEKEKR---GEKDMNELQIAISF 164
             E    F LE E      ++D+ E+ I I F
Sbjct: 116 IGEDFYEFILEDENTKNIKKEDVKEIYIEIVF 147


>gi|317402908|gb|EFV83449.1| hypothetical protein HMPREF0005_01713 [Achromobacter xylosoxidans
           C54]
          Length = 175

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 21/163 (12%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R  G + + DCE++S+ +S + +V
Sbjct: 10  ADLFALTEEALAGMDVELVDVE--RAALGLLRVTIDRV-GGVRIEDCEQVSRQLSRVYEV 66

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE-- 140
           ENI   + RLEV SPGIDRP+  +++F R+ G  +  ++  +   ++   G +    +  
Sbjct: 67  ENI--DYKRLEVGSPGIDRPLRNEAEFRRFAGERIEIKLREALDGRKVFSGTLTVPEDAP 124

Query: 141 -----------TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                      T F LE E    K      +  + D +  A+L
Sbjct: 125 AASDAVAGMHKTVFGLEFE---AKKNEIQVLNFTVDDIERAKL 164


>gi|229815166|ref|ZP_04445503.1| hypothetical protein COLINT_02212 [Collinsella intestinalis DSM
           13280]
 gi|229809396|gb|EEP45161.1| hypothetical protein COLINT_02212 [Collinsella intestinalis DSM
           13280]
          Length = 164

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           +  DI   ++    E     V + ++   K   +++ +++ +G  + L +    +  +S 
Sbjct: 6   VEQDIIDALEARAAEHGIDIVDVEVVGATKAPCVRVRLDKLEGDPINLDEVTAQTAWVSE 65

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            ++  + I   Y LEVSSPG+ RP+ R SDF R+ G  V      +   ++   G I   
Sbjct: 66  TVEALDPISSAYTLEVSSPGMKRPLRRPSDFARFVGEDVELTTT-AMEGRRSYKGAIAAA 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
           ++    ++ E        E  + I+FD +  
Sbjct: 125 TDACVTIQPEG-------EDAVTIAFDDVKK 148


>gi|121604914|ref|YP_982243.1| hypothetical protein Pnap_2013 [Polaromonas naphthalenivorans CJ2]
 gi|226701127|sp|A1VNU4|RIMP_POLNA RecName: Full=Ribosome maturation factor rimP
 gi|120593883|gb|ABM37322.1| protein of unknown function DUF150 [Polaromonas naphthalenivorans
           CJ2]
          Length = 202

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 68/184 (36%), Gaps = 39/184 (21%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD---------DGNMTLRDCEELSQA 75
           +   I+  +  + +  V+I        LL++ ++           +  +   DCE++++ 
Sbjct: 3   LQETIEQTVTGLGYELVEIERTSGG--LLRVTIDMPYLAGTAPGAEQFINAEDCEKVTRQ 60

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG--------- 126
           +  +L+VE     + RLEVSSPGIDRP+  + DF R+ G ++   +    G         
Sbjct: 61  LQFVLEVEG--AEYSRLEVSSPGIDRPLRSEKDFERFAGELIDITLKAPIGVAASAGSTV 118

Query: 127 --DKQKLIGKIMGTSETG------FFLEKEKRGEKDMNELQIAIS---------FDSLLS 169
              ++K  G +                  E   +      +  I           D +  
Sbjct: 119 SASRKKFRGTLERAEPVDGKPGWQIVWSDEPAVKPGQKISKKRIPAPLQALGFTLDEINQ 178

Query: 170 ARLI 173
           ARL 
Sbjct: 179 ARLA 182


>gi|296272022|ref|YP_003654653.1| hypothetical protein Arnit_0482 [Arcobacter nitrofigilis DSM 7299]
 gi|296096197|gb|ADG92147.1| protein of unknown function DUF150 [Arcobacter nitrofigilis DSM
           7299]
          Length = 142

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 14/147 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   I+  ++        I   +E +  + +I++   DG ++L  C E+S+ +SPILD  
Sbjct: 3   LEESIEMTVKGCGVELYDILTTKENDRDIFRIYITSKDG-VSLDKCAEISRLVSPILDTN 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             + G Y LEVSSPGI+R + + + ++   G  V  +      DK  L G+++   E   
Sbjct: 62  EPMYGKYNLEVSSPGIERKLKKTAHYISSIGENVKVK----DFDKNVLKGELIFADENEI 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
                   +    E +  IS+D + SA
Sbjct: 118 --------KVKTQEGEETISYDKISSA 136


>gi|332528134|ref|ZP_08404165.1| hypothetical protein RBXJA2T_19301 [Rubrivivax benzoatilyticus JA2]
 gi|332112705|gb|EGJ12498.1| hypothetical protein RBXJA2T_19301 [Rubrivivax benzoatilyticus JA2]
          Length = 194

 Score =  120 bits (303), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 16/153 (10%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--------MTLRDCEELSQAISPIL 80
           I+  +  +S+  V++        LL++ ++R  G+        +T+ DCE +++ +  +L
Sbjct: 25  IERTVTGLSYDLVEVE--RAGRGLLRVTIDRVPGHAYPVEGEFVTVEDCEAVTRQLQYVL 82

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VEN+   + RLEVSSPG+DRP+ R +D+ R++G  +   +      ++   G +     
Sbjct: 83  EVENV--DYERLEVSSPGLDRPLRRAADYERFSGQEIELTLRQPFQGRKHWKGLLGKGEG 140

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            G+ L  +        E  +A S D +  ARL+
Sbjct: 141 EGWNLVFQDGK----AEQVLAFSLDEVREARLV 169


>gi|328955635|ref|YP_004372968.1| protein of unknown function DUF150 [Coriobacterium glomerans PW2]
 gi|328455959|gb|AEB07153.1| protein of unknown function DUF150 [Coriobacterium glomerans PW2]
          Length = 167

 Score =  120 bits (303), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 11/170 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN-MTLRDCEELS 73
                L   +   ++          V + L    K   +++ +E+ DG+ ++L D    +
Sbjct: 1   MVKTKLEQRLIDALEAEASARDIDIVDVELTGATKAPCVRVRLEKADGSALSLDDVCAQN 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS--GDKQKL 131
             +S +++  + + G Y LEVSSPG+ RP+ R  DF R+ G       + +     + +L
Sbjct: 61  CWVSAVVEDIDPVAGRYTLEVSSPGMARPLRRPRDFARFVGQTAQIGFIQTQGPDGRSRL 120

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            G I   +E    +  +           +A+ F+++  A L  + +  RA
Sbjct: 121 TGLIQSANEDCVTIAPKD-------GEPLAVPFEAIKKATLKPSYDFGRA 163


>gi|154148890|ref|YP_001407189.1| hypothetical protein CHAB381_1677 [Campylobacter hominis ATCC
           BAA-381]
 gi|259585737|sp|A7I3U8|RIMP_CAMHC RecName: Full=Ribosome maturation factor rimP
 gi|153804899|gb|ABS51906.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
          Length = 140

 Score =  120 bits (303), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 13/147 (8%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +  +  E   +     L+ E +  + ++++ + +G + L DCE LS+ +SPILDVE    
Sbjct: 4   LNALCSECGVKFYADELISENSRQIYRVYITKKNG-VNLDDCEALSRLLSPILDVEPPTS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G + LEVSSPG++R +   S+F    G +V   +     + +K+ G+I+   +    L  
Sbjct: 63  GAFTLEVSSPGLERKLTTPSNFENSLGELVKITLK----NGEKISGEILSFKDEILKL-- 116

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
                K     +I+++F+ +  A+  +
Sbjct: 117 -----KTAENNEISVNFNEIKKAKTYI 138


>gi|163857447|ref|YP_001631745.1| hypothetical protein Bpet3135 [Bordetella petrii DSM 12804]
 gi|226703725|sp|A9ITY3|RIMP_BORPD RecName: Full=Ribosome maturation factor rimP
 gi|163261175|emb|CAP43477.1| conserved hypothetical protein [Bordetella petrii]
          Length = 163

 Score =  120 bits (303), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ Q  +  M    V +        LL++ +++  G + + DCE++S+ +S + +V
Sbjct: 2   ADLYALTQQALAGMDVELVDVE--RAALGLLRVTIDKA-GGVRIEDCEQVSRQLSRVYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           ENI   + RLEV SPG+DRP+  +++  R+ G  +  ++      ++   G +   +  G
Sbjct: 59  ENI--DYKRLEVGSPGVDRPLRTEAELRRFAGERIEIKLRQPLDGRKVFSGILSAPANDG 116

Query: 143 ---------FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                    F LE E + +   +   +  +   +  A+L
Sbjct: 117 AAADAQPAVFGLEFEAKKD---DIQVLNFTLGDVERAKL 152


>gi|323127912|gb|ADX25209.1| hypothetical protein SDE12394_08865 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 127

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVR 105
             + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GSDYVLSILVDKE-GGITVEDTSDLTDIISPLLDTITPDPFPDQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  V   +  +    +   G ++        ++   +         + I + 
Sbjct: 61  VESLKAAVGSYVNVSLYKAIDKVKVFQGDLLAFDGETLTIDYLDKTRHK----TVDIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 TVAKARLAV 125


>gi|284030870|ref|YP_003380801.1| hypothetical protein Kfla_2937 [Kribbella flavida DSM 17836]
 gi|283810163|gb|ADB32002.1| protein of unknown function DUF150 [Kribbella flavida DSM 17836]
          Length = 178

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 76/152 (50%), Gaps = 15/152 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + + ++P++E+         +    +  LL++ V+R DG ++L D  ++++AIS  LD +
Sbjct: 13  LENFLRPLVEQFGCDLEAAEVTPAGRRRLLRVLVDR-DGGISLDDVADVTRAISKALDAD 71

Query: 84  NII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +++ +G Y LEVSSPG+DRP+     + R    +VA  +        KL G+I   S+  
Sbjct: 72  DVMGDGAYTLEVSSPGVDRPLTLPRHWRRNISRLVAVTLHSGD----KLTGRIKTVSDET 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L+ +             +++  +  A++ +
Sbjct: 128 ADLDVDGTLR--------TVAYADVDKAKVQI 151


>gi|330466359|ref|YP_004404102.1| hypothetical protein VAB18032_11940 [Verrucosispora maris
           AB-18-032]
 gi|328809330|gb|AEB43502.1| hypothetical protein VAB18032_11940 [Verrucosispora maris
           AB-18-032]
          Length = 175

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 74/158 (46%), Gaps = 17/158 (10%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--- 83
           +I PV++   +    +S+    +  ++++ V+  DG + L    ++S+A+S  LD     
Sbjct: 1   MIAPVVDSAGYDLEDLSVSRAGRRHVVRVIVD-ADGGINLDAVADVSRAVSAALDAAEES 59

Query: 84  --NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------DKQKLIGKI 135
             +I+ G Y+LEVSSPG+DRP+     + R  G +V   +  +          +++ G++
Sbjct: 60  GGDIVAGEYQLEVSSPGVDRPLTLPRHWRRNVGRLVRVTVRGAGESGARPAGDRQVTGRV 119

Query: 136 MGTSETGFFLEKEKRGEK----DMNELQIAISFDSLLS 169
           +   +    LE +    +    D+   ++ + F  L  
Sbjct: 120 VAADDESVALEVDGERVQWPYADLGPGRVQVEFSRLDE 157


>gi|322412489|gb|EFY03397.1| hypothetical protein SDD27957_08990 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 127

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIEGHYRLEVSSPGIDRPMVR 105
             + +L I V+++ G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GSDYVLSILVDKE-GGITVEDTSDLTDIISPLLDTITPDPFPDQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  V   +  +    +   G ++        ++   +         + I + 
Sbjct: 61  VESLKSAVGSYVNVSLYKAIDKVKVFQGDLLAFDGETLTIDYLDKTRHK----TVDIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 TVAKARLAV 125


>gi|319778228|ref|YP_004129141.1| transcription termination protein NusA [Taylorella equigenitalis
           MCE9]
 gi|317108252|gb|ADU90998.1| transcription termination protein NusA [Taylorella equigenitalis
           MCE9]
          Length = 171

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 20/165 (12%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            DI  + +  IE + +  V I        LL++ ++ D G +T+ DCEE+S+ +S I +V
Sbjct: 2   KDIFEISRGPIEGLGYELVDIE--RAAQGLLRVTIDIDRG-ITIEDCEEVSRLLSRIYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E++   + RLEV SPG DRP+ ++ DF R+ G  V  +   +   K+   G +  T +  
Sbjct: 59  EDV--DYARLEVGSPGTDRPLKKEDDFHRFAGQRVEVKFHEAIASKKVFKGVLEVTQDIN 116

Query: 143 ----FFLEKE-----------KRGEKDMNELQIAISFDSLLSARL 172
                 L+ E               ++ +   I  ++  +  A+L
Sbjct: 117 NPFRLVLDPEIKNSKSKKTKNVESAQEQSNQIIEFNYSDVDRAKL 161


>gi|116618454|ref|YP_818825.1| hypothetical protein LEUM_1359 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431860|ref|ZP_03913884.1| protein of hypothetical function DUF150 [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|122271346|sp|Q03WH0|RIMP_LEUMM RecName: Full=Ribosome maturation factor rimP
 gi|116097301|gb|ABJ62452.1| hypothetical protein LEUM_1359 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227352402|gb|EEJ42604.1| protein of hypothetical function DUF150 [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 158

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 14/155 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAISPI 79
              +  +I P+IE  +     ++  +E    +L+I +++ D   +T+ D    +Q ++ +
Sbjct: 6   EQTVIDLISPIIEAHNDLLWDLTFTKEGGQKVLRILLDKPDHQFITMNDLTLFTQEVNEL 65

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFL--RWNGHVVACEIVLSSGDKQKLIGKI 135
           LD    + I   Y L++SSPG DRP+     F   +     +   + ++   ++K  GKI
Sbjct: 66  LDTVDPDPIPEAYVLDISSPGADRPLKELWHFEWAKEANENILVSLFVAKEGQKKWQGKI 125

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              ++ G  L             ++ ++FD +  A
Sbjct: 126 ADLNKDGLTLTTTNG--------RLPLTFDEIAKA 152


>gi|223984471|ref|ZP_03634604.1| hypothetical protein HOLDEFILI_01898 [Holdemania filiformis DSM
           12042]
 gi|223963542|gb|EEF67921.1| hypothetical protein HOLDEFILI_01898 [Holdemania filiformis DSM
           12042]
          Length = 156

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 6/158 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M    +I ++I PV++ +  +   +  + EK + +LQI V R DG+M +  C  +S+ IS
Sbjct: 1   MEQLENIKTLILPVLDSLGIQLYDLKWVNEKKSRILQIAVMRADGSMDIDTCALVSEKIS 60

Query: 78  PILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             LD  ++ I   Y LEV SPG +R +    +     G  V   +        ++ G ++
Sbjct: 61  EALDAHDDWISFEYFLEVCSPGAERELRNAGEIRGALGKHVCVRLKSPVKSMMEITGDLL 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +ET   L    +      +++     D +   RL V
Sbjct: 121 EMNETTLTLSYRDKAVTRKAQVE----LDQIEKIRLAV 154


>gi|229820978|ref|YP_002882504.1| protein of unknown function DUF150 [Beutenbergia cavernae DSM
           12333]
 gi|259585729|sp|C5BWS6|RIMP_BEUC1 RecName: Full=Ribosome maturation factor rimP
 gi|229566891|gb|ACQ80742.1| protein of unknown function DUF150 [Beutenbergia cavernae DSM
           12333]
          Length = 162

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 7/147 (4%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTL--RDCEELSQ 74
           D  L G +  +++PV          +++    +   +++ ++  DG   L   D  + S+
Sbjct: 6   DTALLGRLRDLLEPVAAGCGLHLEDVAVSPAGRRRRVRVTLDLADGPGALGSNDLADASR 65

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LD  +++ G Y LEVS+PG DRP+ +   F R  G +V   +         + G+
Sbjct: 66  AVSAALDDADVVTGPYVLEVSTPGTDRPLTQPRHFRRAQGRLVTLTLAA----GTHVSGR 121

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIA 161
           ++   + G  +  +           +A
Sbjct: 122 LLSADDDGIHVRTDAGATTTFAYADVA 148


>gi|227497550|ref|ZP_03927778.1| YhbC family protein [Actinomyces urogenitalis DSM 15434]
 gi|226833004|gb|EEH65387.1| YhbC family protein [Actinomyces urogenitalis DSM 15434]
          Length = 154

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 16/159 (10%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGN--MTLRDCEELSQA 75
                 ++ ++ PV+E+       +          +++ V+  DG   + L    E++Q 
Sbjct: 7   TATTERLTELLTPVVEQAGLFLEGVETTRAGRYSTVRVIVDLPDGPGDLDLDAVAEVTQT 66

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + ++G Y LEV+SPG +R +     F R  GH             Q L G +
Sbjct: 67  VSDALDEADPVKGQYTLEVTSPGAERELTTPRTFRRATGHQARLVTA-----GQTLTGTV 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               E    +E +          +  I++  LL AR++V
Sbjct: 122 RSADEETVTVEVDG--------SEQTIAYTDLLEARMVV 152


>gi|297191725|ref|ZP_06909123.1| UPF0090 protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721419|gb|EDY65327.1| UPF0090 protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 165

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I +    +  +L+I V+ D+G + L  C ELS+AIS  L
Sbjct: 6   SERLRGLLEPLVSAAELDLEEIEVSRAGRRRMLRITVDSDEG-VELDACAELSRAISEKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + EG Y LEVSSPG DRP+     F+R  G +V  ++         L+ +++   
Sbjct: 65  DETDAMGEGEYVLEVSSPGADRPLSEHRHFVRATGRLVKLQLKEGGD----LVARLLTVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  LE      +     ++A  FD ++ AR+
Sbjct: 121 DEGLDLEVPGVKGRKPTARRVA--FDDIVKARV 151


>gi|295098917|emb|CBK88006.1| Uncharacterized protein conserved in bacteria [Eubacterium
           cylindroides T2-87]
          Length = 154

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 5/144 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   I+PV+ E       I  L  +N  +LQI VE+ DG M L  C   S  I  +LD +
Sbjct: 6   LKEWIEPVLNEKDCVLYDIEWLTNQNPPILQISVEKQDGTMDLDTCAMCSDVIGTLLDNK 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +     Y LEV SPG +R +          G  V  +++       +++G +   ++   
Sbjct: 66  DWYTKEYMLEVCSPGAERELKTDQQLRDAIGKYVYVKLIDPKQGLDQVLGDLKEVNDDSI 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSL 167
            +  +++         I I  +++
Sbjct: 126 IVAYKEKTRNK----TIEIDRNNI 145


>gi|116511572|ref|YP_808788.1| hypothetical protein LACR_0813 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|122940261|sp|Q030K6|RIMP_LACLS RecName: Full=Ribosome maturation factor rimP
 gi|116107226|gb|ABJ72366.1| hypothetical protein LACR_0813 [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 157

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +   I+P I    F    +   +   +++L I V+++ G + + +  ELS+ ISP
Sbjct: 3   DVVKIVEDFIKPHI-PKPFELFAVEWEKFGGDMMLSILVDKE-GGIEIDETAELSELISP 60

Query: 79  ILDVE--NIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LD    +      Y LEV+SPG +RP+ +   F    G  +  ++     ++++  G +
Sbjct: 61  LLDTISPDPFPTEGYLLEVASPGAERPLRKAEHFAGAVGEYIFVKLYQKINNEKEFTGDL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++   +         I I   ++  A+ +V
Sbjct: 121 VSFDGENLVVDVLDKTRHK----NIEIPLSAVAKAQTMV 155


>gi|333024105|ref|ZP_08452169.1| hypothetical protein STTU_1611 [Streptomyces sp. Tu6071]
 gi|332743957|gb|EGJ74398.1| hypothetical protein STTU_1611 [Streptomyces sp. Tu6071]
          Length = 197

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 11/169 (6%)

Query: 8   HSKYEPRIFGDMGLAG--DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNM 64
           H+    R    M       +  +++P++        ++++    +  +LQI V+ D G +
Sbjct: 4   HNSTRGRGVTRMSTTQSERLRELVEPLVTARDLDLEEVTVTPAGRRRVLQIVVDGDSG-V 62

Query: 65  TLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           +L  C ELS+ IS +LD  + + E  Y LEV+SPG DRP+     ++R  G +V  ++  
Sbjct: 63  SLDTCAELSREISTVLDDTDAMGENEYVLEVTSPGADRPLTAHRHYVRATGRLVRFQL-- 120

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +  +L+ +++   + G  LE      +     ++      +  AR+
Sbjct: 121 --AEGGELVARLLKADDAGLDLEVPGVKGRKPTSRRLEFP--EISKARV 165


>gi|125624586|ref|YP_001033069.1| hypothetical protein llmg_1797 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166980233|sp|A2RM41|RIMP_LACLM RecName: Full=Ribosome maturation factor rimP
 gi|124493394|emb|CAL98368.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071377|gb|ADJ60777.1| hypothetical protein LLNZ_09255 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 157

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +   I+P I    F    +   +   +++L I V+++ G + + +  ELS+ ISP
Sbjct: 3   DVVKIVEDFIKPHI-PKPFELFAVEWEKFGGDMMLSILVDKE-GGIEIDETAELSELISP 60

Query: 79  ILDVE--NIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LD    +      Y LEV+SPG +RP+ +   F    G  +  ++     ++++  G +
Sbjct: 61  LLDTISPDPFPTEGYLLEVASPGAERPLRKAEHFAGAVGEYIFVKLYQKINNEKEFTGDL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++   +         I I   ++  A+ +V
Sbjct: 121 VSFDGETLVVDVLDKTRHK----NIEIPLSAVAKAQTMV 155


>gi|222110448|ref|YP_002552712.1| hypothetical protein Dtpsy_1245 [Acidovorax ebreus TPSY]
 gi|254800004|sp|B9MGN9|RIMP_DIAST RecName: Full=Ribosome maturation factor rimP
 gi|221729892|gb|ACM32712.1| protein of unknown function DUF150 [Acidovorax ebreus TPSY]
          Length = 197

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 38/183 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMTLRDCE 70
           +  +++  +  + +  V+I        LL+I ++                +  +T+ DCE
Sbjct: 3   LQQIVEQTVAGLGYDLVEIE--RSAGGLLRITIDLVWVPPTDEVSAAVGVEQFITVEDCE 60

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---- 126
           ++++ +   L+VE +   + RLEVSSPGIDR +  ++DF R+ G V+   +    G    
Sbjct: 61  KVTRQLQFALEVEGV--DYTRLEVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAG 118

Query: 127 -----DKQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSA 170
                +++K  G +      G+ +               +         +  + D L  A
Sbjct: 119 GQVHANRKKFRGTLERADSGGWQIVWSDEPPVKPGQRISKKRVPAPLQALGFTLDELREA 178

Query: 171 RLI 173
           RL 
Sbjct: 179 RLA 181


>gi|259585710|sp|A1W8Z6|RIMP_ACISJ RecName: Full=Ribosome maturation factor rimP
          Length = 197

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 38/183 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMTLRDCE 70
           +  +++  +  + +  V+I        LL+I ++                +  +T+ DCE
Sbjct: 3   LQQIVEQTVAGLGYDLVEIE--RSAGGLLRITIDLVWVPPTDEVSAAVGAEQFITVEDCE 60

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---- 126
           ++++ +   L+VE +   + RLEVSSPGIDR +  ++DF R+ G V+   +    G    
Sbjct: 61  KVTRQLQFALEVEGV--DYTRLEVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAG 118

Query: 127 -----DKQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSA 170
                +++K  G +      G+ +               +         +  + D L  A
Sbjct: 119 GQVHANRKKFRGALERADSGGWQIVWSDEPPVKPGQRISKKRVPAPLQALGFTLDELREA 178

Query: 171 RLI 173
           RL 
Sbjct: 179 RLA 181


>gi|241764250|ref|ZP_04762281.1| protein of unknown function DUF150 [Acidovorax delafieldii 2AN]
 gi|241366373|gb|EER60895.1| protein of unknown function DUF150 [Acidovorax delafieldii 2AN]
          Length = 197

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 77/182 (42%), Gaps = 37/182 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-------------DGNMTLRDCEE 71
           +  V++ ++  + +  V+I        LL++ ++               +  +T+ DCE+
Sbjct: 3   LQQVVEQIVTGLGYDLVEIE--RSPGGLLRVTIDLPWVQPTVDAPVPATEQFITVEDCEK 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---- 127
           +++ +   L+V+ +   + RLEVSSPGIDRP+  + DF+R+ G V+   +    G     
Sbjct: 61  VTRQLQFALEVDGV--EYKRLEVSSPGIDRPLRHEQDFVRFEGSVIDLTLKAPIGAAAAG 118

Query: 128 -----KQKLIGKIMGTSETGFFL-----------EKEKRGEKDMNELQIAISFDSLLSAR 171
                ++K  G +      G+ +           +K  +         +  + D L  AR
Sbjct: 119 QVSATRKKFRGLLSRAESGGWQIVWSDEPAVKPGQKVSKKRVPAPLQALGFTLDELRDAR 178

Query: 172 LI 173
           L 
Sbjct: 179 LA 180


>gi|22299481|ref|NP_682728.1| hypothetical protein tll1938 [Thermosynechococcus elongatus BP-1]
 gi|22295664|dbj|BAC09490.1| tll1938 [Thermosynechococcus elongatus BP-1]
          Length = 168

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   + ++ Q V ++     V +  L  +   +L++ V   + + +L DCE LS+A+   
Sbjct: 17  LLPLVQTLAQQVADQEHLDLVSVQWLTHQSPPILRVEVRHPENDTSLEDCERLSRALEMA 76

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD     E  Y LEVSSPG+   +    DF  + G  V          K    G ++   
Sbjct: 77  LDELPEFEFAYVLEVSSPGLSDYLSSDRDFDAFRGFPVRVTTTAPHRGKTLWEGNLIRRD 136

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L +  R         +AI    + S +L
Sbjct: 137 EVNVYLNQRGRS--------LAIPRSLIASVQL 161


>gi|315636536|ref|ZP_07891772.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315479185|gb|EFU69882.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 142

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 14/147 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   I+  +E +  +   IS L E +  + ++ +   +G + L  C E+S+ +SPILDVE
Sbjct: 3   LEESIKLTVESLGAKLYDISTLREHDKNIFRVSI-TCEGGVNLDKCAEISRMLSPILDVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             + G Y LEVSSPGI+R + +   FL   G  V  +   +    +   G+++   E   
Sbjct: 62  EPMNGEYILEVSSPGIERKLKKVDHFLASIGEKVKVKNFAT----EVFKGELICADEEKI 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            ++ E   E         +++D++LSA
Sbjct: 118 VIKTEFGNE--------ELTYDNILSA 136


>gi|315604482|ref|ZP_07879547.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313809|gb|EFU61861.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 156

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 15/150 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD--DGNMTLRDCEELSQAISPILD 81
           +  ++ P++E+       ++     +  LL++ V+     G +       +S+A+S  LD
Sbjct: 10  LEELLAPIVEQAGLELESVTRSRSDHTPLLRVIVDAPIGAGGVDSDALANVSRAVSRALD 69

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I+G Y LEVS+PG +R + +   +LR  G +V  ++         + G+++   E+
Sbjct: 70  DADPIDGEYLLEVSTPGAERELTKVDHWLRQVGRLVRVKLRA----GGHVSGRVVDADES 125

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           G  ++ +             I++  +  AR
Sbjct: 126 GATIDVDGNAT--------TIAYSDMRKAR 147


>gi|149925032|ref|ZP_01913350.1| hypothetical protein PPSIR1_10025 [Plesiocystis pacifica SIR-1]
 gi|149814096|gb|EDM73722.1| hypothetical protein PPSIR1_10025 [Plesiocystis pacifica SIR-1]
          Length = 174

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 24/172 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           + + I+PV  +M + ++ I      +  +L++F++   G +T+ DC  + + I   LD  
Sbjct: 1   MEAAIEPVCADMGYEALLIEWSGSGQRRVLRVFLDSPKG-VTIADCTRMGRLIGNSLDAA 59

Query: 83  -------------ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI----VLSS 125
                          ++   Y LEVSSPG+DRP+ +K  F    G  V  +       + 
Sbjct: 60  EAAVEAGEGNPALAALLAPGYTLEVSSPGVDRPLAKKRHFTAQVGGRVKLKTWESPAAAD 119

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ----IAISFDSLLSARLI 173
            D++   G+++   +     E ++RG   +++ +    I I    +  A L+
Sbjct: 120 ADERSFNGRLVAVHDDDAAPEDQRRGTVVVHDPERDRTIPIPLPLIRRANLV 171


>gi|320008231|gb|ADW03081.1| protein of unknown function DUF150 [Streptomyces flavogriseus ATCC
           33331]
          Length = 165

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I +    +  +L++ V+ +DG + L  C ELS++IS  L
Sbjct: 6   SDRLRGLLEPLVSAKELDLEEIEVSRAGRRRVLRVIVDSEDG-VELDTCAELSRSISEKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + E  Y LEVSSPG DRP+     ++R  G +    +    G+  +L+ +I+G  
Sbjct: 65  DETDAMGEDEYVLEVSSPGADRPLTEHRHYVRATGRLARLTL----GEGGELVARILGVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  LE      +     ++A  FD +  AR+
Sbjct: 121 DEGLDLEVPGVKGRKPTSRRVA--FDEISRARV 151


>gi|264677929|ref|YP_003277836.1| hypothetical protein CtCNB1_1794 [Comamonas testosteroni CNB-2]
 gi|262208442|gb|ACY32540.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
          Length = 192

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 36/181 (19%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD------------DGNMTLRDCEEL 72
           +  +++  +  + +  V+I        LL+I ++              +  +T+ DCE++
Sbjct: 3   LQQIVEQTVTGLGYDLVEIE--RSAGGLLRITIDLPWQAPEEGAPELPEQFVTVEDCEKV 60

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------ 126
           ++ +   L+V+     + RLEVSSPGIDR +  + DF+R+ G  V   +    G      
Sbjct: 61  TRQLQFALEVDG--ADYARLEVSSPGIDRLLRHEQDFIRFEGSEVDLTLKAPIGAAGGDK 118

Query: 127 ---DKQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSARL 172
              +++K  G +  T E G+ +               +  +      +  + D L  ARL
Sbjct: 119 INANRKKFRGTLERTEEGGWQIVWSDEPPPKPGVRVSKKREPAPLNAMGFTLDELREARL 178

Query: 173 I 173
            
Sbjct: 179 A 179


>gi|326799023|ref|YP_004316842.1| ribosome maturation factor rimP [Sphingobacterium sp. 21]
 gi|326549787|gb|ADZ78172.1| Ribosome maturation factor rimP [Sphingobacterium sp. 21]
          Length = 154

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           MG+   ++ +++  I +      V + +       L I ++ D G +T++DC  +S+ + 
Sbjct: 1   MGIEKRVTELVEEKIADRPDLFLVDVKMHSNGK--LIIHMDGDQG-ITIQDCAAISRHVG 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ EN IE  Y LEVSSPGID P+     + +  G  +  +      D  K  G ++ 
Sbjct: 58  YHLEEENAIENAYNLEVSSPGIDTPLKLLRQYQKNIGRSITLK----MADGSKREGTLLA 113

Query: 138 TSETGFFL-EKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            SE    L E  K   K   +++  +  D ++  +++++
Sbjct: 114 ASEKEMKLAETIKEKGKKAIQVETVVPLDQVIETKVLIS 152


>gi|257460847|ref|ZP_05625948.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
 gi|257442178|gb|EEV17320.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
          Length = 139

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ +  E   +   +  + E    + +I + +  G + L DCE LS+ +SPI DVE  +E
Sbjct: 4   LEALARECGVQLYDVETVSENGRTIYRISITKA-GGVGLDDCERLSRLLSPIYDVEPPLE 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G + LEV SPG++R + +   F    G +V         D QKL G+++        L  
Sbjct: 63  GEWTLEVGSPGLERKLSKPQHFANSVGELVRLSCT----DGQKLSGEVLDCEGGVLRLRT 118

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           +          ++++  D +  AR  V
Sbjct: 119 DGG--------EVSVRLDEIKKARTYV 137


>gi|157803621|ref|YP_001492170.1| hypothetical protein A1E_02200 [Rickettsia canadensis str. McKiel]
 gi|166987409|sp|A8EYF2|RIMP_RICCK RecName: Full=Ribosome maturation factor rimP
 gi|157784884|gb|ABV73385.1| hypothetical protein A1E_02200 [Rickettsia canadensis str. McKiel]
          Length = 125

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +      + +++I ++  +   +++ DC ++S+ I  I
Sbjct: 4   IEQQITNVIEESLIDMGFELVLVKFKGVNSKVVEILIDSLNSEKVSVEDCTKVSRTIPAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVEN+IE    LEV+S G++RP+V+  ++ R+ G  V   +     DK    GKI+   
Sbjct: 64  LDVENLIEDASSLEVASSGLERPLVKFENYNRFLGREVKITLKELLNDKTSYQGKIIKAE 123

Query: 140 E 140
            
Sbjct: 124 N 124


>gi|221067738|ref|ZP_03543843.1| protein of unknown function DUF150 [Comamonas testosteroni KF-1]
 gi|220712761|gb|EED68129.1| protein of unknown function DUF150 [Comamonas testosteroni KF-1]
          Length = 192

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 36/181 (19%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD------------DGNMTLRDCEEL 72
           +  +++  +  + +  V+I        LL+I ++              +  +T+ DCE++
Sbjct: 3   LQQIVEQTVTGLGYDLVEIE--RSAGGLLRITIDLPWQAPEEGVPELPEQFVTVEDCEKV 60

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------ 126
           ++ +   L+V+     + RLEVSSPGIDR +  + DF+R+ G  V   +    G      
Sbjct: 61  TRQLQFALEVDG--ADYARLEVSSPGIDRLLRHEQDFIRFEGSEVDLTLKAPIGAAGGDK 118

Query: 127 ---DKQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSARL 172
              +++K  G +  T E G+ +               +  +      +  + D L  ARL
Sbjct: 119 INANRKKFRGTLERTEEGGWQIVWSDEPPPKPGVRVSKKREPAPLNAMGFTLDELREARL 178

Query: 173 I 173
            
Sbjct: 179 A 179


>gi|293604236|ref|ZP_06686644.1| protein of hypothetical function DUF150 [Achromobacter piechaudii
           ATCC 43553]
 gi|292817461|gb|EFF76534.1| protein of hypothetical function DUF150 [Achromobacter piechaudii
           ATCC 43553]
          Length = 174

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 20/162 (12%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R  G + + DCE++S+ +S + +V
Sbjct: 10  ADLFALTEEALAGMDVELVDVE--RAALGLLRVTIDRV-GGVRIEDCEQVSRQLSRVFEV 66

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM------ 136
           EN+   + RLEV SPGIDRP+  +++F R+ G  +  ++  +   ++   G +       
Sbjct: 67  ENV--DYKRLEVGSPGIDRPLRNEAEFRRFAGERIEIKLREALDGRKVFSGTLTVPEDAA 124

Query: 137 ------GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 G   T F LE E    K      +  + + +  A+L
Sbjct: 125 ASDADAGMHRTVFGLEFE---AKKNEIQVLNFTVEDIERAKL 163


>gi|157738248|ref|YP_001490932.1| hypothetical protein Abu_2045 [Arcobacter butzleri RM4018]
 gi|166980266|sp|A8EWD9|RIMP_ARCB4 RecName: Full=Ribosome maturation factor rimP
 gi|157700102|gb|ABV68262.1| conserved hypothetical protein (DUF150 domain protein) [Arcobacter
           butzleri RM4018]
          Length = 142

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 14/147 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   I+  +E +  +   IS L E +  + ++ +   +G + L  C E+S+ +SPILDVE
Sbjct: 3   LEESIKLTVESLGAKLYDISTLREHDKNIFRVSI-TCEGGVNLDKCAEISRMLSPILDVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             + G Y LEVSSPGI+R + +   FL   G  V  +   +    +   G+++   E   
Sbjct: 62  EPMNGEYLLEVSSPGIERKLKKVDHFLASIGEKVKVKNFAT----EVFKGELICADEEKI 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            ++ E   E         +++D++LSA
Sbjct: 118 VIKTEFGNE--------ELTYDNILSA 136


>gi|291276415|ref|YP_003516187.1| hypothetical protein HMU01790 [Helicobacter mustelae 12198]
 gi|290963609|emb|CBG39441.1| Putative hypothetical protein [Helicobacter mustelae 12198]
          Length = 147

 Score =  118 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           ++ ++   I+ +I+ + +    I  L+E    +L+I +   D  +TL  C+ +S+A+SP+
Sbjct: 2   ISQELQERIENLIQSLGYTLYDIVFLKENQSDILRISITHADQPITLDACQMVSEALSPL 61

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV    +  Y LEVSSPG++R +     F       V   +     DK +    ++   
Sbjct: 62  LDVALSDQKSYFLEVSSPGVERILKTPRHFALSLHTRVRVRL----EDKSEFEAVLLEAK 117

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E       +   ++          + +L   + I+
Sbjct: 118 EEHATFLLDDGVKQSH-------PYAALKKVKTIL 145


>gi|237749787|ref|ZP_04580267.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229374652|gb|EEO25043.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 167

 Score =  118 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 7/141 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  D+   I+ +I +       I LL+E  +++L+I + + +G ++L DCE +S  I+P+
Sbjct: 2   ITQDLHDKIESLITQKGLELYDIELLKENESMILRISIFKKEG-ISLDDCENISTLIAPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE      Y LEVSSPG++R + +   FL   G  VA  +     +K  + G +   +
Sbjct: 61  LDVELSDLEAYHLEVSSPGVERNLKKPKHFLCSIGQKVAVTMS----NKTIINGILESYN 116

Query: 140 ETGFFL-EKEKRGEKDMNELQ 159
                + E  K  +K  N L+
Sbjct: 117 TDEITIKEILKPTKKKQNNLK 137


>gi|329736175|gb|EGG72447.1| hypothetical protein SEVCU028_0396 [Staphylococcus epidermidis
           VCU028]
          Length = 114

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 57/91 (62%), Gaps = 2/91 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++IQPV+ +++F  V I  ++E K+  L+I ++++ G + L DC   S+ IS +
Sbjct: 4   ITEQVEALIQPVLNDLNFELVDIEYVKEGKDHFLRISIDKE-GGVDLNDCTIASEKISEV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           +D  + I   Y L+V+SPG +RP+ +K  F+
Sbjct: 63  MDENDPIPEMYYLDVASPGAERPIKKKKIFI 93


>gi|259016315|sp|Q8DHL1|RIMP_THEEB RecName: Full=Ribosome maturation factor rimP
          Length = 157

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   + ++ Q V ++     V +  L  +   +L++ V   + + +L DCE LS+A+   
Sbjct: 6   LLPLVQTLAQQVADQEHLDLVSVQWLTHQSPPILRVEVRHPENDTSLEDCERLSRALEMA 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD     E  Y LEVSSPG+   +    DF  + G  V          K    G ++   
Sbjct: 66  LDELPEFEFAYVLEVSSPGLSDYLSSDRDFDAFRGFPVRVTTTAPHRGKTLWEGNLIRRD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L +  R         +AI    + S +L
Sbjct: 126 EVNVYLNQRGRS--------LAIPRSLIASVQL 150


>gi|294507806|ref|YP_003571864.1| hypothetical protein SRM_01991 [Salinibacter ruber M8]
 gi|294344134|emb|CBH24912.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 160

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 79/155 (50%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           LA  +S + + VI    +  V + +   K   +++++++ ++  +   D   +S+ +  +
Sbjct: 13  LADRVSGLTEEVIVGTDYFLVDVEVRGHKGTRVVEVYIDSEE-EVGHDDLALISKEVGFL 71

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++++G Y+LE+SSPGI RP+   + + +  G  +      S GD++ ++G +    
Sbjct: 72  LDVEDVVDGSYKLELSSPGIKRPLTMPAQYRKNVGRTLRVR-FESDGDEEIVVGDLTDAD 130

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    LE         +  ++ + + ++  AR+ +
Sbjct: 131 DEEIELEL-------PSAERLQLPYTTITQARIEL 158


>gi|311104986|ref|YP_003977839.1| hypothetical protein AXYL_01790 [Achromobacter xylosoxidans A8]
 gi|310759675|gb|ADP15124.1| hypothetical protein AXYL_01790 [Achromobacter xylosoxidans A8]
          Length = 182

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 21/163 (12%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R  G + + DCE++S+ +S + +V
Sbjct: 17  ADLFALTKEALAGMDVELVDVE--RAALGLLRVTIDRV-GGVRIEDCEQVSRQLSRVFEV 73

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM------ 136
           EN+   + R+EV SPG+DRP+  +++F R+ G  +  ++  +   ++   G +       
Sbjct: 74  ENV--DYKRMEVGSPGVDRPLRNEAEFRRFAGERIEIKLREALDGRKVFAGILTMPEDDA 131

Query: 137 -------GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                  G  +T F LE E    K      +  + D +  A+L
Sbjct: 132 AASDAAAGMQKTVFGLEFE---AKKNEIQVLNFTVDDIERAKL 171


>gi|319762632|ref|YP_004126569.1| hypothetical protein Alide_1938 [Alicycliphilus denitrificans BC]
 gi|330824722|ref|YP_004388025.1| ribosome maturation factor rimP [Alicycliphilus denitrificans K601]
 gi|317117193|gb|ADU99681.1| protein of unknown function DUF150 [Alicycliphilus denitrificans
           BC]
 gi|329310094|gb|AEB84509.1| Ribosome maturation factor rimP [Alicycliphilus denitrificans K601]
          Length = 196

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 37/182 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGN--------MTLRDCEE 71
           +  +++  +  + +  V+I        LL+I ++       DG         +T+ DCE+
Sbjct: 3   LQQIVEQTVAGLGYDLVEIE--RSAGGLLRITIDLMWAPPADGGEVQATGQFVTVEDCEK 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS------ 125
           +++ +   L+VE +   + RLEVSSPGIDR +  + DF R+ G V+   +          
Sbjct: 61  VTRQLQFALEVEGV--DYKRLEVSSPGIDRLLRNEQDFTRFEGEVIDITLKEPLGAAAGG 118

Query: 126 ---GDKQKLIGKIMGTSETGFFL-----------EKEKRGEKDMNELQIAISFDSLLSAR 171
               +++K  G +      G+ +           ++  +         +  + D L  AR
Sbjct: 119 QVAANRKKFRGTLERVPAGGWQIVWSDEPPVKPGQRVSKKRVPAPLQALGFTLDELREAR 178

Query: 172 LI 173
           L 
Sbjct: 179 LA 180


>gi|325479429|gb|EGC82525.1| hypothetical protein HMPREF9290_1585 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 147

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  + +  I E+ +  V I     K N +L  F+  ++G +T+ DCE++S  + 
Sbjct: 1   MDLTDRLREIFEADISELGYELVDIEYKGSKGNKILTFFIFNEEG-ITIDDCEKVSAFLD 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSS  + RP+    D  R    V+  ++     D +  +GK+  
Sbjct: 60  TRLDELDLIKDSYYLEVSSQDLSRPLKTDRDIERNINEVLKVKMK----DGEVFLGKVSD 115

Query: 138 TSETGFFLEKEKRG-----EKDMNELQIAISF 164
            +E  +  + E        + D+ ++ I I F
Sbjct: 116 INEDTYEFDLEDGTSRQVNKSDVKQINIEIVF 147


>gi|15672745|ref|NP_266919.1| hypothetical protein L173151 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|34223137|sp|Q9CHG8|RIMP_LACLA RecName: Full=Ribosome maturation factor rimP
 gi|12723681|gb|AAK04861.1|AE006310_3 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406314|gb|ADZ63385.1| Ribosome maturation factor [Lactococcus lactis subsp. lactis CV56]
          Length = 157

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +   I+P I +  F    +   +   +++L I V+++ G + + +  ELS+ ISP
Sbjct: 3   DVVKIVEDFIRPHIPQ-PFELFAVEWEKFGGDMMLSILVDKE-GGIEIDETAELSEIISP 60

Query: 79  ILDVE--NIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LD    +      Y LEV+SPG +RP+ +   F    G  +  ++     +++++ G +
Sbjct: 61  LLDTISPDPFPTEGYLLEVASPGAERPLRKAEHFAGAVGEYIFVKLYQKINNEKEITGDL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++   +         I I   ++  A+ +V
Sbjct: 121 VSFDGETLVVDVLDKTRHK----NIEIPLSAVAKAQTMV 155


>gi|89900916|ref|YP_523387.1| hypothetical protein Rfer_2132 [Rhodoferax ferrireducens T118]
 gi|122479183|sp|Q21WJ7|RIMP_RHOFD RecName: Full=Ribosome maturation factor rimP
 gi|89345653|gb|ABD69856.1| protein of unknown function DUF150 [Rhodoferax ferrireducens T118]
          Length = 204

 Score =  117 bits (295), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 42/187 (22%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD----------DGNMTLRDCEELSQ 74
           +  +++  +  + +  V+I        LL+I ++            +  +T+ DCE++++
Sbjct: 3   LKEIVEQTVAGLGYDLVEIE--RSAGGLLRITIDLPWVPGTAGSEAEQFVTVEDCEKVTR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD------- 127
            +   L+V+ +   + RLEVSSPGIDRP+    DF R+ G  +   +    G        
Sbjct: 61  QLLFALEVDGV--DYKRLEVSSPGIDRPLRHGQDFERFVGREIDVTLKAPIGAAAGALVN 118

Query: 128 --KQKLIGKIMGTS----ETGFFL---------------EKEKRGEKDMNELQIAISFDS 166
             ++K  G +  T     E+G                  ++  +         +  + D 
Sbjct: 119 ATRKKFRGTLERTQSSNGESGVVPGWQIVWSDAPEVKPGQRVSKKRLPAPLQALGFTLDE 178

Query: 167 LLSARLI 173
           L  ARL 
Sbjct: 179 LKEARLA 185


>gi|297156813|gb|ADI06525.1| hypothetical protein SBI_03404 [Streptomyces bingchenggensis BCW-1]
          Length = 180

 Score =  117 bits (295), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        ++ +    K  +L+I V+ DDG + L  C ELS+AIS  L
Sbjct: 6   SERLRGLLEPLVSARDLDLEEVEVTPAGKRRVLRIVVDSDDG-VQLDACAELSRAISQTL 64

Query: 81  DVENIIE-GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + +    Y LEV+SPG DRP+     + R  G ++   +     +  +L+ +I    
Sbjct: 65  DDTDAMGRHPYVLEVTSPGADRPLTEPRHYRRAAGRLMKARL----AEGGELVARITAVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  L+ E  G K        ++F  +  AR+
Sbjct: 121 DEG--LDVEVPGVKGRRPTARRLAFKEISKARV 151


>gi|325962804|ref|YP_004240710.1| hypothetical protein Asphe3_14020 [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468891|gb|ADX72576.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 192

 Score =  117 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 72/159 (45%), Gaps = 13/159 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISP 78
           A  + ++++P ++        ++++   + ++ + V+      G + L    ++S+ +S 
Sbjct: 16  AARLRALLEPAVQANRLYLEDVAIVAGSHRVVHVVVDLPQEETGGVGLDVIADISKVLSD 75

Query: 79  ILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           +LD  +  +    Y LEVSSPG+ RP+     + R  G +V   ++        + G+I 
Sbjct: 76  VLD-NDPGDDGRPYDLEVSSPGVGRPLTEPRHWHRAKGRLVKVNVLQGD----NVTGRIQ 130

Query: 137 GTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
              + G  +  E   K+G K      + + FD + + ++
Sbjct: 131 AVDDAGVTIVPEIAVKKGMKPRQGDPVKLPFDRIRNGKV 169


>gi|259586215|sp|Q2S1N5|RIMP_SALRD RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score =  117 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 79/155 (50%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           LA  +S + + VI    +  V + +   K   +++++++ ++  +   D   +S+ I  +
Sbjct: 8   LADRVSGLTEEVIVGTDYFLVDVEVRGHKGTRVVEVYIDSEE-EVGHDDLALISKEIGFL 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++++G Y+LE+SSPGI RP+   + + +  G  +      S GD++ ++G +    
Sbjct: 67  LDVEDVVDGSYKLELSSPGIKRPLTMPAQYRKNVGRTLRVR-FESDGDEEIVVGDLTDAD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    LE         +  ++ + + ++  AR+ +
Sbjct: 126 DEEIELEL-------PSAERLQLPYTTITQARIEL 153


>gi|47095906|ref|ZP_00233509.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47015652|gb|EAL06582.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 101

 Score =  117 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 4/103 (3%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++  
Sbjct: 1   MSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMW 60

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G ++    T   +    +  K    +   I  D +  ARL +
Sbjct: 61  EGTLVSYDGTTLVITITDKTRK----ITCEIPKDKVAKARLAI 99


>gi|281491259|ref|YP_003353239.1| hypothetical protein LLKF_0783 [Lactococcus lactis subsp. lactis
           KF147]
 gi|281375000|gb|ADA64518.1| Hypothetical protein LLKF_0783 [Lactococcus lactis subsp. lactis
           KF147]
          Length = 157

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +   I+P I +  F    +   +   +++L I V+++ G + + +  ELS+ ISP
Sbjct: 3   DVVKIVEDFIRPHIPQ-PFELFAVEWEKFGGDMMLSILVDKE-GGIEIDETAELSEIISP 60

Query: 79  ILDVE--NIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LD    +      Y LEV+SPG +RP+ +   F    G  +  ++     +++++ G +
Sbjct: 61  LLDTISPDPFPTEGYLLEVASPGAERPLRKAEHFAGAVGEYIFVKLYQKINNEKEITGDL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++   +         I I   ++  A+ +V
Sbjct: 121 VSFDGETLVVDVLDKTRYK----NIEIPLSAVAKAQTMV 155


>gi|296111950|ref|YP_003622332.1| hypothetical protein LKI_09120 [Leuconostoc kimchii IMSNU 11154]
 gi|295833482|gb|ADG41363.1| hypothetical protein LKI_09120 [Leuconostoc kimchii IMSNU 11154]
          Length = 158

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 74/158 (46%), Gaps = 14/158 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAISP 78
           +   I+ +I P++E+       +S   E    +L+I +++ +  ++T+ D  + +Q ++ 
Sbjct: 5   VEQKITVLITPIVEKRDKLLWDLSYTREGGQKVLRILLDKPNHESITMTDLTDFTQEVNE 64

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN--GHVVACEIVLSSGDKQKLIGK 134
           +LD    + I   Y L++SSPG DRP+++   F         V   + ++   ++K  G 
Sbjct: 65  LLDTTDPDPIPEPYLLDISSPGADRPLIKPWHFKWAQESEEEVLISLFVAKNGQKKWQGN 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           I   ++ G  L  E          ++ ++FD +  A L
Sbjct: 125 ISSLTDDGLVLATE--------ADELVLNFDEIAKAVL 154


>gi|317498936|ref|ZP_07957219.1| hypothetical protein HMPREF0996_02203 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893769|gb|EFV15968.1| hypothetical protein HMPREF0996_02203 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 95

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELS 73
           +   + +      ++ P+IE  +F  V +  ++E  N  L+++ +++ G + + DC  +S
Sbjct: 1   MARRVDIETKTEELVLPIIEANNFELVDVEYVKEGANWYLRVYADKE-GGIAIDDCVLIS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           +++   LD E+ IE  Y LEVSSPG+ RP+ +K 
Sbjct: 60  RSLEEKLDAEDFIEDAYILEVSSPGLGRPLKKKK 93


>gi|239815724|ref|YP_002944634.1| hypothetical protein Vapar_2746 [Variovorax paradoxus S110]
 gi|259645131|sp|C5CLW1|RIMP_VARPS RecName: Full=Ribosome maturation factor rimP
 gi|239802301|gb|ACS19368.1| protein of unknown function DUF150 [Variovorax paradoxus S110]
          Length = 212

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 71/187 (37%), Gaps = 42/187 (22%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMTLRDCE 70
           +   ++  +  + +  V+I        LL++ ++                +  +T+ DCE
Sbjct: 3   LQQTVEQTVAGLGYDLVEIE--RSAGGLLRVTIDLPWTAPTSEAVAAGIPEPFVTVEDCE 60

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--- 127
           ++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G V+   +    G    
Sbjct: 61  KVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRNEQDFERFVGEVIDITLKAPMGAAAA 118

Query: 128 ------KQKLIGKIMGTSETG------FFL---------EKEKRGEKDMNELQIAISFDS 166
                 ++K  G +   +                     +K  +         +    D 
Sbjct: 119 GQVSATRKKFRGTLERVAGADGAPGWQIVWSDAPEPKPGQKVSKKRAPAKLHALGFVLDE 178

Query: 167 LLSARLI 173
           L  ARL 
Sbjct: 179 LRDARLA 185


>gi|15675575|ref|NP_269749.1| hypothetical protein SPy_1725 [Streptococcus pyogenes M1 GAS]
 gi|19746627|ref|NP_607763.1| hypothetical protein spyM18_1733 [Streptococcus pyogenes MGAS8232]
 gi|13622779|gb|AAK34470.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|19748846|gb|AAL98262.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 127

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IEGHYRLEVSSPGIDRPMVR 105
             + +L I V+++ G +T+ D  +L+  ISP+LD  +       Y LEVSSPG++RP+  
Sbjct: 2   GSDYILSILVDKE-GGITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  +    +   G ++        ++   +    +    + I + 
Sbjct: 61  ADSLKAAVGSYINVSLYQAIDKVKVFQGDLLAFDGETLTIDYLDKTRHKI----VNIPYQ 116

Query: 166 SLLSARLIV 174
           ++   R+ V
Sbjct: 117 AVAKVRMAV 125


>gi|308233944|ref|ZP_07664681.1| hypothetical protein AvagD15_02782 [Atopobium vaginae DSM 15829]
 gi|328943956|ref|ZP_08241421.1| hypothetical protein HMPREF0091_10646 [Atopobium vaginae DSM 15829]
 gi|327491925|gb|EGF23699.1| hypothetical protein HMPREF0091_10646 [Atopobium vaginae DSM 15829]
          Length = 156

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 5/135 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN---MTLRDCEELSQA 75
            +   +   ++          V + L   +   ++++ ++  D     +TL +    S+ 
Sbjct: 5   DIQTTLLKALEEAATPRGIDIVDVELAGTRTAPVIRLRIDHLDETLPTITLDEVAAQSEW 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I+ +LD  + I+  Y LEVSSPG+ RP+ R  DF R+ G  V      +   +++  GK+
Sbjct: 65  INEVLDSLDPIDSSYTLEVSSPGLARPLRRIHDFERFCGQEVELVTR-ALEGRKRFTGKL 123

Query: 136 MGTSETGFFLEKEKR 150
                  F L  + +
Sbjct: 124 SSVEGNTFTLIVDGQ 138


>gi|320108354|ref|YP_004183944.1| hypothetical protein AciPR4_3194 [Terriglobus saanensis SP1PR4]
 gi|319926875|gb|ADV83950.1| protein of unknown function DUF150 [Terriglobus saanensis SP1PR4]
          Length = 195

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 39/193 (20%)

Query: 19  MGLA-GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVER----------------- 59
           M L    I      V        V++S         LQIFVE+                 
Sbjct: 1   MALELDKIRDAADRVAASHQLEIVEVSFTGAGKFSALQIFVEKNAEGRAAMLREAETDES 60

Query: 60  ---DDG-------NMTLRDCEELSQAISPILDVENIIEG--HYRLEVSSPGIDRPMVRKS 107
                G        +T +DC   +     +LDVE ++ G   Y LEVSSPGI+R + + +
Sbjct: 61  KALPRGVPVEALSGVTHQDCAAFATDFGTLLDVEELVPGTTEYTLEVSSPGIERKLFKTA 120

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDM-------NELQI 160
           D+ R+ G +V  +   +    +   G++   ++    L+      K             +
Sbjct: 121 DYERFAGSLVTLKTFQAINGTKNFTGRMT-FTDGTATLDLAAVKAKGKKKGTKAEAPQTV 179

Query: 161 AISFDSLLSARLI 173
            I F+++  A+L+
Sbjct: 180 EIPFNAIEKAQLV 192


>gi|284929276|ref|YP_003421798.1| hypothetical protein UCYN_07210 [cyanobacterium UCYN-A]
 gi|284809720|gb|ADB95417.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
          Length = 125

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 1/111 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PVI+EM    V +     K   +L+  +     N++L DC ++S+ +  I
Sbjct: 5   LIQQIIDLTTPVIKEMGIDIVNVVFHTNKCPSILRFDISNPAENISLDDCAKVSRTLESI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           LD   II   Y LEVSSPGI + +  + DF  + G  +         +K++
Sbjct: 65  LDETTIIPHAYVLEVSSPGISQILNSERDFTTFQGFAIGIMTSPPYLNKER 115


>gi|28895280|ref|NP_801630.1| hypothetical protein SPs0368 [Streptococcus pyogenes SSI-1]
 gi|28810526|dbj|BAC63463.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 127

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IEGHYRLEVSSPGIDRPMVR 105
             + +L I V+++DG +T+ D  +L+  ISP+LD  +       Y LEVSSPG++RP+  
Sbjct: 2   GSDYILSILVDKEDG-ITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  +    +   G ++        ++   +    +    + I + 
Sbjct: 61  ADSLKAAVGSYINVSLYQAIDKVKVFQGDLLAFDGETLTIDYLDKTRHKI----VNIPYQ 116

Query: 166 SLLSARLIV 174
           ++   R+ V
Sbjct: 117 AVAKVRMAV 125


>gi|306820435|ref|ZP_07454071.1| protein of hypothetical function DUF150 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551510|gb|EFM39465.1| protein of hypothetical function DUF150 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 153

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 76/159 (47%), Gaps = 13/159 (8%)

Query: 21  LAGDISSVIQPVIE---EMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           ++  I  + + ++       +  V +  ++E   + L+I +++ DG+MT+ DC +LS  I
Sbjct: 1   MSKKIEQITEELVLRVLPEEYEMVDVEYVKEAGEMYLRILIDK-DGSMTIDDCVKLSGII 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-KQKLIGKI 135
              +D ++ I+  Y LE+SSPG+DR + +  DF+R  G  V  ++        ++ +  +
Sbjct: 60  GDEIDKKDYIKDAYNLEISSPGLDRTLKKDRDFVREKGKDVEVKLFKKDEKYGKEFVAVL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  E G  +         ++E  ++I    +    L +
Sbjct: 120 EGLDENGNVV-------FVIDEEVVSIDKKEIAKINLYL 151


>gi|319793510|ref|YP_004155150.1| hypothetical protein Varpa_2847 [Variovorax paradoxus EPS]
 gi|315595973|gb|ADU37039.1| protein of unknown function DUF150 [Variovorax paradoxus EPS]
          Length = 215

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 72/190 (37%), Gaps = 45/190 (23%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMTLRDCE 70
           +  +++  +  + +  V+I        LL++ ++                +  +T+ DCE
Sbjct: 3   LQQIVEQTVAGLGYDLVEIE--RSAGGLLRVTIDLPWTAPTSEAVAAGVPEPFVTVEDCE 60

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--- 127
           ++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G V+   +    G    
Sbjct: 61  KVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRNEQDFERFVGSVIDLTLKAPMGAAAA 118

Query: 128 ------KQKLIGKIMGTSETG---------FFL---------EKEKRGEKDMNELQIAIS 163
                 ++K  G +    +                       +K  +         +   
Sbjct: 119 GQVSATRKKFRGTLERAEKAEGADAAPGWQIVWSDAPKPKPGQKVSKKRAPAPLHALGFV 178

Query: 164 FDSLLSARLI 173
            D L  ARL 
Sbjct: 179 LDELRDARLA 188


>gi|302542144|ref|ZP_07294486.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302459762|gb|EFL22855.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 168

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        ++ +    K  +L+I V+ DDG + L  C ELS+AIS  L
Sbjct: 6   SERLRGLLEPLVSARDLDLEEVEVTPAGKRRVLRIVVDSDDG-VQLDTCAELSRAISQAL 64

Query: 81  DVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + +    Y LEV+SPG +RP++ +  + R  G ++  ++V    +  +LI +I+   
Sbjct: 65  DESDAMGQTPYVLEVTSPGAERPLIEQRHYRRATGRLMKAQLV----EGGELIARIIAVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  LE    G K        ++F  +  AR+
Sbjct: 121 DEGLDLEV--PGVKGRKPTTRRLAFKEISKARV 151


>gi|302522223|ref|ZP_07274565.1| conserved hypothetical protein [Streptomyces sp. SPB78]
 gi|318062644|ref|ZP_07981365.1| ribosome maturation protein RimP [Streptomyces sp. SA3_actG]
 gi|318081084|ref|ZP_07988416.1| ribosome maturation protein RimP [Streptomyces sp. SA3_actF]
 gi|302431118|gb|EFL02934.1| conserved hypothetical protein [Streptomyces sp. SPB78]
          Length = 183

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        ++++    +  +LQI V+ D G ++L  C ELS+ IS +L
Sbjct: 6   SERLRELVEPLVTARDLDLEEVTVTPAGRRRVLQIVVDGDSG-VSLDTCAELSREISTVL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + E  Y LEV+SPG DRP+     ++R  G +V  ++     +  +L+ +++   
Sbjct: 65  DDTDAMGENEYVLEVTSPGADRPLTAHRHYVRATGRLVRFQL----AEGGELVARLLKAD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  LE      +     ++      +  AR+
Sbjct: 121 DAGLDLEVPGVKGRKPTSRRLEFP--EISKARV 151


>gi|300173096|ref|YP_003772262.1| hypothetical protein LEGAS_0795 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887475|emb|CBL91443.1| conserved hypothetical protein [Leuconostoc gasicomitatum LMG
           18811]
          Length = 158

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 71/158 (44%), Gaps = 14/158 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAISP 78
           +   I  +I P+++        ++  +E    +L+I +++ +   +T+ D    +Q ++ 
Sbjct: 5   VEQRIIELITPIVDRRKELLWDLTYTKEGGQKVLRILLDKPNHQFITMADLTAFTQEVNE 64

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN--GHVVACEIVLSSGDKQKLIGK 134
           +LD    + I   Y L++SSPG DRP+ +   F         +   + ++   ++K  GK
Sbjct: 65  LLDTSDPDPIPEAYLLDISSPGADRPLKQPWHFKWAQDGNENILMSLFVAKNGQKKWQGK 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           I   ++ G  L          +  +I ++FD +  A L
Sbjct: 125 IKTLTDNGLVL--------LTDHGEIILNFDEIAKAVL 154


>gi|227499285|ref|ZP_03929397.1| protein of hypothetical function DUF150 [Anaerococcus tetradius
           ATCC 35098]
 gi|227218636|gb|EEI83870.1| protein of hypothetical function DUF150 [Anaerococcus tetradius
           ATCC 35098]
          Length = 147

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 6/143 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  + +  IE M +  V I     KN  +L  F+   +G +T+ DCE+ S  + 
Sbjct: 1   MNLTNRLKEIFERDIESMGYELVDIEFKGGKNNKVLTFFIYNKEG-ITIEDCEKASAFLD 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  +II+  Y LEVSS  + RP+    D  R    ++  ++     D +  + K+  
Sbjct: 60  TKLDEIDIIKDSYYLEVSSQDLSRPLKTDRDLERNKDELLKVKLK----DGEVFLAKLKE 115

Query: 138 TSETGFFLEKEKRGEKDMNELQI 160
             +  +  + E +  +++ + +I
Sbjct: 116 ILDDSYIFDIEDKEAREVRKDEI 138


>gi|297562527|ref|YP_003681501.1| hypothetical protein Ndas_3595 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846975|gb|ADH68995.1| protein of unknown function DUF150 [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 160

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 7/137 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G       I+ +++PV+ E       + L    K  +L++ V+ D+G + L    E+SQ
Sbjct: 1   MGAQAREERIAELLEPVLAEAGLDLEAVELTPAGKRRVLRVVVDSDNG-VDLDTVGEVSQ 59

Query: 75  AISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            ++ +LD  +++    Y LEV+SPG+DRP+ +   + R  G +V   +     +  K+ G
Sbjct: 60  EVNTLLDSSDVMGAQPYVLEVTSPGVDRPLTQPRHWRRSRGRLVIASL----AEGGKVTG 115

Query: 134 KIMGTSETGFFLEKEKR 150
           ++ G  + G  L+ E +
Sbjct: 116 RVTGADDDGVTLDVEGQ 132


>gi|255530055|ref|YP_003090427.1| hypothetical protein Phep_0139 [Pedobacter heparinus DSM 2366]
 gi|255343039|gb|ACU02365.1| protein of unknown function DUF150 [Pedobacter heparinus DSM 2366]
          Length = 154

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 80/158 (50%), Gaps = 7/158 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   ++ +++  I +       + +    N  L I V+ D+G ++++DC  +S+ +  
Sbjct: 1   MQVEKRVTELVEEKISDRP-ELFLVEVKMLPNNKLIIHVDGDEG-ISIQDCAAISRHVGF 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+ EN IE  Y LEVSSPG+  P+  K  +L+  G  ++ ++       +   GK++  
Sbjct: 59  HLEEENTIEKAYNLEVSSPGVGEPLKLKRQYLKNVGRELSVKL----DGGEVKEGKLLAA 114

Query: 139 SETGFFLEKE-KRGEKDMNELQIAISFDSLLSARLIVT 175
            E G  +E + K   K +  ++  I F+ ++  +++++
Sbjct: 115 DEQGITIEAKIKEKGKKVQLVETRIDFNKIIETKVLIS 152


>gi|108804246|ref|YP_644183.1| hypothetical protein Rxyl_1409 [Rubrobacter xylanophilus DSM 9941]
 gi|122381798|sp|Q1AW57|RIMP_RUBXD RecName: Full=Ribosome maturation factor rimP
 gi|108765489|gb|ABG04371.1| protein of unknown function DUF150 [Rubrobacter xylanophilus DSM
           9941]
          Length = 152

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 12/150 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +S  ++  + E     V+      +  LL + V+R+ G +    C  +   ++P L+ 
Sbjct: 9   DRLSEAVERALPE-GTELVEARF--SRGPLLTLLVDREGGPVDHEFCARIISIVAPALEE 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E        +EVSSPGI+RP+ R S F R+ G  V   +      ++   G I   ++ G
Sbjct: 66  EGY---SGMIEVSSPGIERPLTRPSHFRRFIGRRVRVRVGEPVDGRRNFTGVIERVADAG 122

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           F L   + GE      ++ + F S+  A L
Sbjct: 123 FVLRLSEDGE------EVELPFGSVTRAHL 146


>gi|149277311|ref|ZP_01883453.1| hypothetical protein PBAL39_10486 [Pedobacter sp. BAL39]
 gi|149232188|gb|EDM37565.1| hypothetical protein PBAL39_10486 [Pedobacter sp. BAL39]
          Length = 154

 Score =  114 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 79/158 (50%), Gaps = 7/158 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   ++ +I+  I +       + +    N  L I V+ D+G ++++DC  +S+ +  
Sbjct: 1   MQVEKRVTELIEEKISDRP-ELFLVEVKMLPNNKLIIHVDGDEG-ISIQDCAAISRHVGF 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+ EN IE  Y LEVSSPG+  P+  K  + +  G  V+ ++       +   GK++  
Sbjct: 59  HLEEENTIEKAYNLEVSSPGVGEPLKLKRQYDKNIGREVSVKLS----GGEVKEGKLLSV 114

Query: 139 SETGFFLEKE-KRGEKDMNELQIAISFDSLLSARLIVT 175
            + G  +E + K   K    ++ ++ F+S+   +++++
Sbjct: 115 DDKGIIIEAKVKEKGKKAQLVETSVDFNSITETKVLIS 152


>gi|159036963|ref|YP_001536216.1| hypothetical protein Sare_1324 [Salinispora arenicola CNS-205]
 gi|259586188|sp|A8M743|RIMP_SALAI RecName: Full=Ribosome maturation factor rimP
 gi|157915798|gb|ABV97225.1| protein of unknown function DUF150 [Salinispora arenicola CNS-205]
          Length = 219

 Score =  114 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 66/133 (49%), Gaps = 8/133 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  V++PV++   +    +S+    +  ++Q+ V+  DG + L    ++S+A+S  LD
Sbjct: 40  ARLHQVVEPVVQGAGYDLEDLSVSRAGRRHVVQVIVD-ADGGVDLDAVADVSRAVSAALD 98

Query: 82  VE-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV-LSSGDKQKLIGKI 135
                  +I+ G Y+LEVSSPG+ RP+     + R  G +V   +        +++ G++
Sbjct: 99  AAEEVGGDIVAGEYQLEVSSPGVARPLTLPRHWRRNTGRLVRFTVRGGPEAVDRQVTGRV 158

Query: 136 MGTSETGFFLEKE 148
           +   +    +E +
Sbjct: 159 VEADDERVVVETD 171


>gi|268316866|ref|YP_003290585.1| hypothetical protein Rmar_1307 [Rhodothermus marinus DSM 4252]
 gi|262334400|gb|ACY48197.1| protein of unknown function DUF150 [Rhodothermus marinus DSM 4252]
          Length = 160

 Score =  114 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 81/160 (50%), Gaps = 10/160 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
           G   L   I + ++ V++  +F  + + +   +   +++IF++ D G  +LRD E+LS+ 
Sbjct: 7   GTPALIEQIRARVEEVLQGTTFFLIDVVVRGRRGAHVVEIFIDGDRGP-SLRDLEQLSRE 65

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV-LSSGDKQKLIGK 134
           I  +LD ++++ G Y L VSSPG+DRP+V    + +  G  +  ++V ++    ++L G 
Sbjct: 66  IGFLLDSDDLLPGPYTLNVSSPGVDRPLVHPRQYPKHVGRELEVKLVAVADAPAERLRGT 125

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +         L          +  Q  + ++ + SAR+ +
Sbjct: 126 LQRADAEAIELRL-------PDGSQRRLRYEEIQSARVCL 158


>gi|329947838|ref|ZP_08294770.1| hypothetical protein HMPREF9056_02685 [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328523462|gb|EGF50560.1| hypothetical protein HMPREF9056_02685 [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 165

 Score =  114 bits (287), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 11/170 (6%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGN--MT 65
           + ++PR   D  LA  ++ ++ PV+ +       +         ++++FV+  DG   + 
Sbjct: 2   AAHDPRKRSD-ALARSLTDLLAPVVADAGLHLEAVETTRAGRYSVVRVFVDLADGPGDLD 60

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           +     ++ A+S  LD  + ++G Y LEVS+PG +R +     F R  GH          
Sbjct: 61  IDTLGPVTAAVSQALDESDPVKGQYTLEVSTPGAERELSTLRHFRRAVGHSARVRTAD-- 118

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
              ++L G +      G           +++ ++  I+   +  AR++VT
Sbjct: 119 ---EELTGVVTAADAGGD--NDAGLVSIEVDGVERRIALGDIAEARMVVT 163


>gi|116669974|ref|YP_830907.1| hypothetical protein Arth_1413 [Arthrobacter sp. FB24]
 gi|259585698|sp|A0JUT7|RIMP_ARTS2 RecName: Full=Ribosome maturation factor rimP
 gi|116610083|gb|ABK02807.1| protein of unknown function DUF150 [Arthrobacter sp. FB24]
          Length = 205

 Score =  114 bits (286), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 12/159 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDD---GNMTLRDCEELSQAIS 77
           A  + ++++P ++        +S+ +   N ++ + V+      G ++L    E+S+ +S
Sbjct: 28  AERVRALLEPSVQAHRLYLEDVSIHVAGANRVVHVVVDLPQEETGGVSLDVIAEISKELS 87

Query: 78  PILDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            ILD +       Y LEVSSPG+ RP+     + R  G +V   ++      + L G+I 
Sbjct: 88  GILDGDPSYDSRPYDLEVSSPGVGRPLTEPRHWHRARGRMVKVNVIQ----GENLTGRIQ 143

Query: 137 GTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
              + G  L  E   K+G K        I FD + + ++
Sbjct: 144 SVDDDGVTLVPEIAAKKGMKPKQGEPEKIPFDRIRNGKV 182


>gi|296129354|ref|YP_003636604.1| protein of unknown function DUF150 [Cellulomonas flavigena DSM
           20109]
 gi|296021169|gb|ADG74405.1| protein of unknown function DUF150 [Cellulomonas flavigena DSM
           20109]
          Length = 186

 Score =  114 bits (286), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 75/186 (40%), Gaps = 14/186 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVE---RDDGNMTLRDCEE 71
            G    A  +  V++  +         + +       ++++ V+    D G + L    +
Sbjct: 1   MGAPATAPRVREVVETAVTGAGLLLDGLEVAGSGRSTVVRVTVDLADDDPGTLDLDRVGD 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +++A+S  LD  +++ G Y LEV SPG +RP+     + R  G  V         D   L
Sbjct: 61  VTRAVSDALDAADVLPGAYTLEVGSPGAERPLTLARHWRRARGRTVLVRRT----DGTTL 116

Query: 132 IGKIMGTSETG------FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
            G++ G ++          +    +G + +    + +++D +  AR+ V    +R +   
Sbjct: 117 TGRLDGVADGDAPELVVVPVTDPGKGRRPVVGAPVTLAWDDVRDARVQVDLAAVREADEE 176

Query: 186 YGSYAG 191
            G   G
Sbjct: 177 AGPQDG 182


>gi|119963357|ref|YP_947325.1| uncharacterized Bcr YhbC family protein [Arthrobacter aurescens
           TC1]
 gi|259585697|sp|A1R513|RIMP_ARTAT RecName: Full=Ribosome maturation factor rimP
 gi|119950216|gb|ABM09127.1| putative Uncharacterized BCR YhbC family protein [Arthrobacter
           aurescens TC1]
          Length = 203

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 24/180 (13%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERD 60
            ST  +H+  E R+           ++++P +         +S+ +   +  + + V+  
Sbjct: 16  NSTATIHNPEESRL----------KALLEPAVLASRLYLEDVSIHVAGSHRTVHVVVDLP 65

Query: 61  D---GNMTLRDCEELSQAISPILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGH 115
               G ++L    ++S+ +S ILD  +  +    Y LEVSSPG+ RP+     + R  G 
Sbjct: 66  QEETGGVSLDAIADVSRGLSDILD-NDPHDDGRPYDLEVSSPGVSRPLTEPRHWHRARGR 124

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
           +V   ++        L+G+I    +    L  E   K+G K      I I FD +   ++
Sbjct: 125 MVRVNVIQGD----NLLGRIASVGDDAVTLIPEHEVKKGMKPKQGEPITIPFDRIRQGKV 180


>gi|160902005|ref|YP_001567586.1| hypothetical protein Pmob_0529 [Petrotoga mobilis SJ95]
 gi|189040239|sp|A9BH33|RIMP_PETMO RecName: Full=Ribosome maturation factor rimP
 gi|160359649|gb|ABX31263.1| protein of unknown function DUF150 [Petrotoga mobilis SJ95]
          Length = 157

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 7/159 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +  +  +   I      V  ++      I +    KN +L++ +++ DG +++ DCE  S
Sbjct: 1   MLTNKEIKQLIWEKADNVASKLGLEIFDILIKGSNKNKILEVVIDKADGYVSIGDCERFS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A  P LD  ++ +  Y L VSSPG+DR +  K+D+ R+ G +    +         +IG
Sbjct: 61  KAFDPWLDEIDLFDKSYELVVSSPGLDRKLRGKADYERFKGKLAKFILKGKETKHPVVIG 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            I    E    + ++  G+         I  + +  A L
Sbjct: 121 YIDEILEDQIKITEKDSGKL------FNIDLNEIDKANL 153


>gi|291532988|emb|CBL06101.1| Uncharacterized protein conserved in bacteria [Megamonas
           hypermegale ART12/1]
          Length = 112

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   +  + + ++    +  V +  ++E++  L+++++++ G + L DC+E+S  +   L
Sbjct: 5   VEEAVEKIAEEILANTDYELVDVEYVKERDWFLRVYIDKE-GGIGLDDCQEVSGLLDEKL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKS 107
           +  NII   Y LEVSSPG+DR + ++ 
Sbjct: 64  EELNIINDRYILEVSSPGLDRALKKEK 90


>gi|295836232|ref|ZP_06823165.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|295825917|gb|EFG64551.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 183

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I++    +  +LQI V+ D G ++L  C ELS+ IS +L
Sbjct: 6   SERLREILEPLVTARDLDLEEITVTPAGRRRVLQIVVDGDTG-VSLDTCAELSREISTVL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + E  Y LEV+SPG DRP+     ++R  G +V  ++     +  +L+ +++   
Sbjct: 65  DDTDAMGENEYVLEVTSPGADRPLSAHRHYVRATGRLVRFQL----AEGGELVARLLKAD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  LE      +     ++      +  AR+
Sbjct: 121 DAGLDLEVPGVKGRKPTSRRLEFP--EISKARV 151


>gi|271963646|ref|YP_003337842.1| hypothetical protein Sros_2114 [Streptosporangium roseum DSM 43021]
 gi|270506821|gb|ACZ85099.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 166

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 15/154 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++PV+         +++    K  LL++ V+R DG ++L D  E+S A+S  LD
Sbjct: 8   DRLIKLLEPVVGAEGLDLEDVTVTPAGKRRLLRVVVDR-DGGVSLDDVAEVSLAVSATLD 66

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            ++ +    Y LEVSSPG+DRP+     + R    +V  ++     D   + G+I+ T E
Sbjct: 67  ADDAMGATPYVLEVSSPGVDRPLTEPRHWRRAVKRLVKADLR----DGTSVEGRIVATDE 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           TG  L        D+      I ++ L   R+ V
Sbjct: 123 TGVEL--------DIAGAPRRIDYEDLTRGRVQV 148


>gi|332665271|ref|YP_004448059.1| ribosome maturation factor rimP [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334085|gb|AEE51186.1| Ribosome maturation factor rimP [Haliscomenobacter hydrossis DSM
           1100]
          Length = 158

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSF-RSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I +++Q   +E  F     I + +E    L++FV+ D G M    C+ +S+ +   
Sbjct: 2   ITEKIEALLQEKYQEPEFADCFTIEIKQEGGNRLEVFVDSDSG-MQFEKCQRISRFLEAH 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD    +   Y LEVSSPGI+RP+     +LR  G      +       +   G +   +
Sbjct: 61  LDTNGWLGEVYTLEVSSPGIERPLKFARQYLRNIGRTFEVRLSA----GETKTGVLKAVN 116

Query: 140 ETGFFLEKE---KRGEKDMNE-LQIAISFDSLLSA 170
                LE+E   K G+K+M   +Q  I F+ +  A
Sbjct: 117 PESIVLEEEIKWKEGKKNMKGTVQTVIPFEHIAKA 151


>gi|154509103|ref|ZP_02044745.1| hypothetical protein ACTODO_01620 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798737|gb|EDN81157.1| hypothetical protein ACTODO_01620 [Actinomyces odontolyticus ATCC
           17982]
          Length = 156

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 15/153 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERD--DGNMTLRDCEELSQAISP 78
            G +  ++ PV+ +       +     +   LL++ VE     G +      ++S+A+S 
Sbjct: 7   EGPLEELLAPVVAQSGLELDSVIRSRSDAMPLLRVIVEAPIGAGGIDSDTLADVSRAVSK 66

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDV + I+G Y LEVS+PG +R + +   ++R  G +V  ++         + G+++  
Sbjct: 67  ALDVADPIDGEYLLEVSTPGAERELTKVGHWMRQIGRLVRIKLRA----GGYVSGRVVAA 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +ET   ++ +             I +  +  AR
Sbjct: 123 NETSATIDVDGETTI--------IDYQDMRKAR 147


>gi|269127539|ref|YP_003300909.1| hypothetical protein Tcur_3333 [Thermomonospora curvata DSM 43183]
 gi|268312497|gb|ACY98871.1| protein of unknown function DUF150 [Thermomonospora curvata DSM
           43183]
          Length = 205

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 11/150 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  +++ ++ P+         ++ +    +  L++I V+  DG +TL D   LSQA+S  
Sbjct: 35  VQAELTRLVGPLAAAQGLDLEELDVKPAGRRRLVRIVVD-ADGGVTLEDTATLSQAVSAA 93

Query: 80  LDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           LD  +++    Y LEV+SPG+DRP+     + R  G +V      +  D  ++ G+++  
Sbjct: 94  LDDTDVMGEAPYVLEVTSPGVDRPLTEPRHWRRATGRLV----RAALADGGQVEGRVVAA 149

Query: 139 SETGFFLEKEKR----GEKDMNELQIAISF 164
            E    LE   R    G  ++   ++ + F
Sbjct: 150 DEEAVVLEVAGRRRRFGHGELGRGRVQVEF 179


>gi|114566430|ref|YP_753584.1| hypothetical protein Swol_0896 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|122318498|sp|Q0AYJ1|RIMP_SYNWW RecName: Full=Ribosome maturation factor rimP
 gi|114337365|gb|ABI68213.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 139

 Score =  112 bits (281), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 41  VQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGI 99
           V I   +E K   L++F+++D+G + L  C + ++AI    D + I      LEVSSPG+
Sbjct: 14  VNIEYRKENKEQFLRVFIDKDNG-VDLDMCSQANRAIKESFDEQEIPYD--YLEVSSPGL 70

Query: 100 DRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ 159
           DR + ++ D+ R++G+ V  +   S    Q++ G ++G       +E E    K   E+ 
Sbjct: 71  DRVLKKERDWERFSGYRVRIKTRKSFPGPQRITGILLGFDSENIAVELEGELLKVPREMI 130

Query: 160 IAISF 164
             I  
Sbjct: 131 TIIRL 135


>gi|307720624|ref|YP_003891764.1| hypothetical protein Saut_0703 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978717|gb|ADN08752.1| protein of unknown function DUF150 [Sulfurimonas autotrophica DSM
           16294]
          Length = 150

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 19/150 (12%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFV---ERDDG---NMTLRDCEELSQAISPILD 81
           I+ V++ +        ++ E +  + ++ V   + ++G    ++L +C EL+  ISP+LD
Sbjct: 7   IESVVKSVGLVLYDTVIVNENDETIFRVSVISNDVEEGKQKGVSLDECVELTHLISPLLD 66

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           V   I G YRLEV SPGI+R +     F +  G  V+  +     +K+KL GK++     
Sbjct: 67  VTPPISGEYRLEVGSPGIERKLTTLDHFKKSVGENVSLLL----DEKEKLKGKLVKVEGN 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             F+EKE +           + F+++  A+
Sbjct: 123 KLFVEKEGQIH--------EVDFNAVKKAK 144


>gi|284044672|ref|YP_003395012.1| hypothetical protein Cwoe_3218 [Conexibacter woesei DSM 14684]
 gi|283948893|gb|ADB51637.1| protein of unknown function DUF150 [Conexibacter woesei DSM 14684]
          Length = 139

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             I   I+  + +     V++ L E      +++F++  DG ++L  CE ++  ++    
Sbjct: 2   SRIQEQIETTLSKTEPE-VEVLLAEVLGGTTVRLFIDHPDG-VSLELCERVTHHLAG--- 56

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
               I   Y LEVSSPG +RP+ + + F R+ G         + G +    G+++G +E+
Sbjct: 57  ----IRERYGLEVSSPGSERPLTKPAHFRRYLGQRARVRTRGAHGGQGSFTGELVGANES 112

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +  E           +AI +  +  + L+
Sbjct: 113 EVTIAAE--------TGVVAIPYTEIKRSNLV 136


>gi|317121852|ref|YP_004101855.1| hypothetical protein Tmar_1015 [Thermaerobacter marianensis DSM
           12885]
 gi|315591832|gb|ADU51128.1| protein of unknown function DUF150 [Thermaerobacter marianensis DSM
           12885]
          Length = 153

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 10/145 (6%)

Query: 31  PVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P+ E      + ++   E +   LQ  V+R  G +T+ +C   SQA+ P+L     ++  
Sbjct: 16  PLAEARGLVLLDVAYRREGRRWFLQCVVDRP-GGVTMDECAAFSQALDPVLAGVEGLDED 74

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
             +EV SPG+DR +    +F  + G  V          +++ +G++ G  +    +  E+
Sbjct: 75  VVVEVMSPGLDRTLRNDREFDWFRGREVEVATFRPVEGRRRFVGRLEGLEDGDVVITDEE 134

Query: 150 RGEKDMNELQIAISFDSLLSARLIV 174
              +        I  D++  A+L V
Sbjct: 135 GAHR--------IPRDAVAKAQLYV 151


>gi|293192165|ref|ZP_06609377.1| hypothetical protein HMPREF0970_01722 [Actinomyces odontolyticus
           F0309]
 gi|292820361|gb|EFF79353.1| hypothetical protein HMPREF0970_01722 [Actinomyces odontolyticus
           F0309]
          Length = 156

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 15/153 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERD--DGNMTLRDCEELSQAISP 78
            G +  ++ PV+ +       +     +   LL++ VE     G +      E+S+A+S 
Sbjct: 7   EGPLEELLTPVVAQSGLELDSVIRSRSDAMPLLRVIVEAPIGAGGIDSDTLAEVSRAVSK 66

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + I+G Y LEVS+PG +R + +   ++R  G +V  ++         + G+++  
Sbjct: 67  ALDAADPIDGEYLLEVSTPGAERELTKVGHWMRQIGRLVRIKLRA----GGYVSGRVVAA 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            ET   ++ +             I +  +  AR
Sbjct: 123 DETSATIDVDGETTI--------IDYQDMRKAR 147


>gi|291279909|ref|YP_003496744.1| hypothetical protein DEFDS_1528 [Deferribacter desulfuricans SSM1]
 gi|290754611|dbj|BAI80988.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 158

 Score =  111 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 11/156 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + S ++  ++        I    EK   +L+IF+E D+  + L DC  +S+ +S 
Sbjct: 7   SIKEKVKSYLEENVKNEFLDIYDIQFRREKSGWVLRIFIEGDN--VGLSDCISVSKQVSK 64

Query: 79  ILDVENIIE-GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIM 136
            LD  +II   +Y LEVS+PG  R +    +F ++ G     ++V      ++   G I 
Sbjct: 65  WLDEVDIIPYENYNLEVSTPGATREIRNLDEFKKYIGKYCKIKLVEHDKYGRKNYKGYIK 124

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                   L  E+  +      +  I +  +  A L
Sbjct: 125 NVEGDIITLFVEEENK------EFEIDYYLVKKANL 154


>gi|299530200|ref|ZP_07043626.1| hypothetical protein CTS44_05471 [Comamonas testosteroni S44]
 gi|298721857|gb|EFI62788.1| hypothetical protein CTS44_05471 [Comamonas testosteroni S44]
          Length = 182

 Score =  111 bits (278), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 36/171 (21%)

Query: 35  EMSFRSVQISLLEEKNLLLQIFVERD------------DGNMTLRDCEELSQAISPILDV 82
            + +  V+I        LL+I ++              +  +T+ DCE++++ +   L+V
Sbjct: 3   GLGYDLVEIE--RSAGGLLRITIDLPWQAPEEGAPELPEQFVTVEDCEKVTRQLQFALEV 60

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---------DKQKLIG 133
           +     + RLEVSSPGIDR +  + DF+R+ G  V   +    G         +++K  G
Sbjct: 61  DG--ADYARLEVSSPGIDRLLRHEQDFIRFEGSEVDLTLKAPIGAAGGDKINANRKKFRG 118

Query: 134 KIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSARLI 173
            +  T E G+ +               +  +      +  + D L  ARL 
Sbjct: 119 TLERTEEGGWQIVWSDEPPPKPGVRVSKKREPAPLNAMGFTLDELREARLA 169


>gi|210634028|ref|ZP_03297946.1| hypothetical protein COLSTE_01864 [Collinsella stercoris DSM 13279]
 gi|210158972|gb|EEA89943.1| hypothetical protein COLSTE_01864 [Collinsella stercoris DSM 13279]
          Length = 164

 Score =  111 bits (278), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 9/125 (7%)

Query: 49  KNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
           K   +++ +++ +G  + L +    +  +S  ++  + I G Y LEVSSPG+ RP+ R S
Sbjct: 35  KAPCIRVRLDKLEGDPINLDEVTAQTAWVSDTVEALDPIAGAYTLEVSSPGMKRPLRRPS 94

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
           DF R+ G  V      +   ++   G I  T++T   ++ E        E  + ISFD +
Sbjct: 95  DFARFAGEEVELTTT-AMEGRRSYKGVIAETTDTAVTIQPEG-------EEAVTISFDDV 146

Query: 168 LSARL 172
               L
Sbjct: 147 KKCTL 151


>gi|312130304|ref|YP_003997644.1| hypothetical protein Lbys_1583 [Leadbetterella byssophila DSM
           17132]
 gi|311906850|gb|ADQ17291.1| protein of unknown function DUF150 [Leadbetterella byssophila DSM
           17132]
          Length = 151

 Score =  110 bits (277), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 80/158 (50%), Gaps = 10/158 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  +++ +I +  +  V+I++ + K    + IF++ D G +T+  C E+S+ + 
Sbjct: 1   MSLKDTVIKLVEDLIRDTDYYVVEIAVSDSKIRRKVSIFLDSDAG-ITIDQCTEVSRKLG 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L  E +I+  + LEVSSPG D P+  +  +++  G  +     L      ++ GK++ 
Sbjct: 60  LQL--EEVIDEAFTLEVSSPGADSPLKFERQYVKNIGRSLKI---LKVDGS-EIKGKLVS 113

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                  +E E   +K +    +A+S D +  A++I++
Sbjct: 114 VENGSITIETE--AKKKVKSETVALSLDEIKEAKVIIS 149


>gi|220912194|ref|YP_002487503.1| hypothetical protein Achl_1424 [Arthrobacter chlorophenolicus A6]
 gi|219859072|gb|ACL39414.1| protein of unknown function DUF150 [Arthrobacter chlorophenolicus
           A6]
          Length = 222

 Score =  110 bits (276), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 14/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDD---GNMTLRDCEELSQAIS 77
           A  + ++++P +         + + +   + ++ + V+      G ++L    ++S+ +S
Sbjct: 45  ADRLRALLEPSVLANRLYLEDVVINVAGSHRVVHVVVDLPQEETGGVSLDVIADISKVLS 104

Query: 78  PILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +       Y LEVSSPG+ RP+     + R  G +   +++      + + G+I
Sbjct: 105 DALD-NDPGADTRPYDLEVSSPGVGRPLTEPRHWHRAKGRIATVKVIQ----GENVTGRI 159

Query: 136 MGTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
               + G  L  E   K+G K      + + FD + + ++
Sbjct: 160 QSVDDGGVTLVPEIAVKKGMKPKQGDPVKLPFDRIRTGKV 199


>gi|259585703|sp|B8HG52|RIMP_ARTCA RecName: Full=Ribosome maturation factor rimP
          Length = 205

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 14/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDD---GNMTLRDCEELSQAIS 77
           A  + ++++P +         + + +   + ++ + V+      G ++L    ++S+ +S
Sbjct: 28  ADRLRALLEPSVLANRLYLEDVVINVAGSHRVVHVVVDLPQEETGGVSLDVIADISKVLS 87

Query: 78  PILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +       Y LEVSSPG+ RP+     + R  G +   +++      + + G+I
Sbjct: 88  DALD-NDPGADTRPYDLEVSSPGVGRPLTEPRHWHRAKGRIATVKVIQ----GENVTGRI 142

Query: 136 MGTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
               + G  L  E   K+G K      + + FD + + ++
Sbjct: 143 QSVDDGGVTLVPEIAVKKGMKPKQGDPVKLPFDRIRTGKV 182


>gi|297571192|ref|YP_003696966.1| hypothetical protein Arch_0611 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931539|gb|ADH92347.1| protein of unknown function DUF150 [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 156

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 72/158 (45%), Gaps = 17/158 (10%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLR--DCEELSQAI 76
            ++  I+ ++ PV++E       + ++   K+ ++++ V+   G   +      ++S+A+
Sbjct: 4   NVSAQIAQLLDPVVQESGLWLETVRVVGAGKHTVVRVTVDLPSGPGGVDSTQLMDVSRAV 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +LD ++ I+G Y LEVS+PG  R +  +  F R  G  VA ++     D  K   +I+
Sbjct: 64  SVVLDEKDPIKGAYTLEVSTPGATRELSEERHFSRAIGRKVAFQLS----DDTKFTERIV 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             ++    L                I+   +  A +++
Sbjct: 120 DVADGVITL----------AGQPGTIAVVDVARAHVVL 147


>gi|328950380|ref|YP_004367715.1| Ribosome maturation factor rimP [Marinithermus hydrothermalis DSM
           14884]
 gi|328450704|gb|AEB11605.1| Ribosome maturation factor rimP [Marinithermus hydrothermalis DSM
           14884]
          Length = 147

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 7/123 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISPILD 81
           ++ +VI+ V+  + +  ++++L    K  +L + +ER D+  ++  D E  SQ IS  LD
Sbjct: 2   ELWNVIEAVVRPLGYEVLEVTLKGGGKTRVLTVRLERADEQPISFADLERASQVISLELD 61

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I G YRLEV SPG DRP++    F R+ G     +      D+ +  G+I+     
Sbjct: 62  RLDPIPGAYRLEVESPGPDRPLITARHFERFMGLKAKVQ-----SDEGRFTGRIVRVEGD 116

Query: 142 GFF 144
              
Sbjct: 117 VVT 119


>gi|320528333|ref|ZP_08029495.1| hypothetical protein HMPREF9430_01620 [Solobacterium moorei F0204]
 gi|320131247|gb|EFW23815.1| hypothetical protein HMPREF9430_01620 [Solobacterium moorei F0204]
          Length = 153

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 5/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M     ++ + QPV +E   R  +I  L  +   LQ+ ++ D   + L  C E+S+ +  
Sbjct: 1   MENIDKLTKLFQPVFDECHVRLYEIVWLGNE-KTLQVAIDNDAHAIDLDICAEVSEKLGV 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  + I+  Y LEV SPG +R +   ++F +     +  E+     +  ++ G +   
Sbjct: 60  VLDKYDPIKEEYSLEVCSPGAEREIKDYAEFEQLVDEYIYVELKEPFKNMVEITGYVRSA 119

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           S     LE   +  K        I  +++  ARL +
Sbjct: 120 SVDAIELEYRDKAVKRTA----TIEKNNIRFARLAI 151


>gi|300772909|ref|ZP_07082778.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759080|gb|EFK55907.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 156

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 82/159 (51%), Gaps = 7/159 (4%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
              +   +  ++   I +       +S+  + N +L+I V+ D G + + DC ++S+ + 
Sbjct: 2   KTKVEKRVEELVLEKIGDRE-DLFIVSIKMQSNGVLEILVDGDSG-IAIDDCVKISRHVG 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ EN+IE  YRLEVSSPGID P++    + +  G  V  +    + + +K  GK++ 
Sbjct: 60  FHLEEENVIETAYRLEVSSPGIDSPLIMIRQYKKNIGRNVRVK----NHEGEKREGKLLN 115

Query: 138 TSETGFFLEKEKRGEKDMN-ELQIAISFDSLLSARLIVT 175
            +E+   +E+ K+ +      ++  I F+ +   +++++
Sbjct: 116 VTESNITIEESKKEKGKKAVPVESVIPFEQIKETKVLIS 154


>gi|227875843|ref|ZP_03993969.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|269977479|ref|ZP_06184451.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
 gi|306819124|ref|ZP_07452838.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307700024|ref|ZP_07637073.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
 gi|227843591|gb|EEJ53774.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|269934395|gb|EEZ90957.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
 gi|304648100|gb|EFM45411.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307614785|gb|EFN94005.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
          Length = 178

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 16/161 (9%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD--DGNMTLRDCEELS 73
           G++ +A ++S ++ P + ++     ++ +   KN   ++IF++     G +     E  S
Sbjct: 9   GNVDIAAEVSQLLAPTVTQLGLFLEKVCVKGSKNSRQVEIFLDLPAGSGEIGFERLEAAS 68

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           Q IS ++D  + +EG Y LEVS+ G +  +     F+R  G      +       QK +G
Sbjct: 69  QEISRLMDSADPVEGKYNLEVSTLGAEHALDNPRLFVRAVGRDAEITVA-----GQKRVG 123

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +I+   ET F  E++ + E         ISF +L SAR +V
Sbjct: 124 RILAAGETDFTWEEDGKQE--------TISFSALQSARTVV 156


>gi|227537267|ref|ZP_03967316.1| protein of hypothetical function DUF150 [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227242871|gb|EEI92886.1| protein of hypothetical function DUF150 [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 156

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 82/159 (51%), Gaps = 7/159 (4%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
              +   +  ++   I +       +S+  + N +L+I V+ D G + + DC ++S+ + 
Sbjct: 2   KTKVEQRVEELVLEKIGDRE-DLFIVSIKMQGNGVLEILVDGDSG-IAIDDCVKISRHVG 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ EN+IE  YRLEVSSPGID P+V    + +  G  V  +    + + +K  GK++ 
Sbjct: 60  FHLEEENVIETAYRLEVSSPGIDSPLVLIRQYEKNIGRNVRVK----NHEGEKREGKLLD 115

Query: 138 TSETGFFLEKEKRGEKDMN-ELQIAISFDSLLSARLIVT 175
            +E+   +E+ K+ +      ++  I F+ +   +++++
Sbjct: 116 VTESAITIEESKKEKGKKAVPVESVIPFEQIKETKVLIS 154


>gi|32266338|ref|NP_860370.1| hypothetical protein HH0839 [Helicobacter hepaticus ATCC 51449]
 gi|34222773|sp|P59821|RIMP_HELHP RecName: Full=Ribosome maturation factor rimP
 gi|32262388|gb|AAP77436.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 157

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 22/164 (13%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFV---------ERDDG-NMTLRDC 69
           L+    + I+ +   +      I   +E    +L++ +         +  +G  ++L+DC
Sbjct: 2   LSQHTQARIEQLAATLGLYIYDIDFFKEDNRPILRVSITRKAPMQKQDCKNGLAVSLQDC 61

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + +S+ ISP+LDVE+     Y LEVSSPG++R + +   ++   G  V+ +++    DK 
Sbjct: 62  QNVSELISPLLDVEDENLKDYNLEVSSPGLERVLKKPQHYIYSLGEKVSIKLM----DKS 117

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            + G +   +E             D  +  ++ SF  +   +++
Sbjct: 118 VIEGILHDVNENV-------SISIDTGKEILSFSFADMKKIKVV 154


>gi|291296310|ref|YP_003507708.1| hypothetical protein Mrub_1931 [Meiothermus ruber DSM 1279]
 gi|290471269|gb|ADD28688.1| protein of unknown function DUF150 [Meiothermus ruber DSM 1279]
          Length = 159

 Score =  108 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 19/153 (12%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-R 59
           ME  H L +          G A   S V + V+  + +  ++  L   KN +L + +E +
Sbjct: 1   MEPEHPLQA----------GGAPQWSQVAESVLAPLGYEVLEAGLKSGKNPVLLVRIERK 50

Query: 60  DDGNMTLRDCEELSQAISPILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
           D+  +++ D E  ++A+S  LD  E ++   Y L+V SPG DRP+     F R+ G  + 
Sbjct: 51  DEVPISIADLERANRALSAHLDTLEALLPARYLLQVESPGADRPLFTARHFERFAG--LK 108

Query: 119 CEIVLSSGDKQKLIGKIMGTSETGF--FLEKEK 149
             +    G+     G+I           LEK++
Sbjct: 109 VRVRSPQGN---FTGRIGAVRGDMVEFLLEKDE 138


>gi|313680245|ref|YP_004057984.1| hypothetical protein Ocepr_1355 [Oceanithermus profundus DSM 14977]
 gi|313152960|gb|ADR36811.1| protein of unknown function DUF150 [Oceanithermus profundus DSM
           14977]
          Length = 147

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 7/135 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER-DDGNMTLRDCEELSQAISPILD 81
           D+  +++ V+  + +  +++ L    K  +L + +ER D+  +T+ D +  ++ I   LD
Sbjct: 2   DLWELVENVVRPLGYEPLEVRLHGAGKTQVLTVRLERLDEAPITVADLQRANRIIGLELD 61

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I G YRLEV SPG DRP++ +  F R+ G  V               G+++   E 
Sbjct: 62  RADPIRGSYRLEVESPGPDRPLLTRRHFERFAGLKVKVRTEEGG-----FTGRVVEVGED 116

Query: 142 GFFLEKEKRGEKDMN 156
               E      + + 
Sbjct: 117 AVTFELAGGERRTLP 131


>gi|220903348|ref|YP_002478660.1| hypothetical protein Ddes_0062 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254799886|sp|B8J1Y7|RIMP_DESDA RecName: Full=Ribosome maturation factor rimP
 gi|219867647|gb|ACL47982.1| protein of unknown function DUF150 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 258

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 73/207 (35%), Gaps = 52/207 (25%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE---------RDDGN--- 63
             D  L   I  + QPV+  +      +        ++++FV+           +G+   
Sbjct: 1   MTDNALRETIIRLAQPVVHTLGLVIWGVETARAGRTIVRLFVDVPTIPQRPGMPEGSEEP 60

Query: 64  ---------------------------MTLRDCEELSQAISPILDVENIIEGHYRLEVSS 96
                                       T+  CEE+S+ ++  L+VE+ I   Y LEVS+
Sbjct: 61  SSAITAPAPAHDPQESSGAEAPAAPTSATIEQCEEISRHLALALEVEDSIADAYVLEVST 120

Query: 97  PGIDRPMVRKSDFLRWNGHVVACEIVLSS---------GDKQKLIGKIMGTSETGFFL-- 145
           PG+ R        + + G VV   +             G ++   G ++   +  F L  
Sbjct: 121 PGLSRLFFSLEQMIPYVGDVVEARLHTPVASTDPAAHGGPRRVWRGTLVAVEDDAFVLAP 180

Query: 146 --EKEKRGEKDMNELQIAISFDSLLSA 170
                +   +D N+  + + ++++  A
Sbjct: 181 VTVSPEGEVEDENQPPVRLPWEAVRRA 207


>gi|206895232|ref|YP_002247277.1| protein of unknown function, putative [Coprothermobacter
           proteolyticus DSM 5265]
 gi|259585743|sp|B5Y930|RIMP_COPPD RecName: Full=Ribosome maturation factor rimP
 gi|206737849|gb|ACI16927.1| protein of unknown function, putative [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 169

 Score =  108 bits (271), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 9/151 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+   I  ++    F  + +    EK   +   V   + ++T+ DCE+L++AI P+L+ 
Sbjct: 8   ADLEERISKIVVSKGFYFIDLEERMEKGAHIISVVVHGEPSVTIGDCEKLTRAILPLLES 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
                 +  LEV+SPG+DR + R+ ++  + G V+        G  Q +  K++G     
Sbjct: 68  FPWYGDNDHLEVTSPGLDRVLKREWEYEIFKGRVIDIS-FDRDGKSQTIRAKLVGRENEN 126

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +E E             I FD +  A+L+
Sbjct: 127 VVIEYEGN--------YFRIPFDQVRKAKLV 149


>gi|21224052|ref|NP_629831.1| hypothetical protein SCO5703 [Streptomyces coelicolor A3(2)]
 gi|256784870|ref|ZP_05523301.1| hypothetical protein SlivT_10300 [Streptomyces lividans TK24]
 gi|289768764|ref|ZP_06528142.1| UPF0090 protein [Streptomyces lividans TK24]
 gi|34223163|sp|Q9KYR2|RIMP_STRCO RecName: Full=Ribosome maturation factor rimP
 gi|7801275|emb|CAB91139.1| hypothetical protein SC5H4.27 [Streptomyces coelicolor A3(2)]
 gi|289698963|gb|EFD66392.1| UPF0090 protein [Streptomyces lividans TK24]
          Length = 177

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I++    +  +L + V+ D G   L    ++S+A+S  L
Sbjct: 6   SERLRELLEPLVASQGLDLEEIAVDSVGRRRVLSVVVDSDTGA-DLDRIADVSRALSAKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + EG Y LEV +PG +R + +   ++R    +V  ++     +  +L+ +I+   
Sbjct: 65  DETDAMGEGEYTLEVGTPGAERSLTQHRHYVRATDRLVRFQLR----EGGELVARILAVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E G  LE    G K        + F  +  AR+ V
Sbjct: 121 EDGLDLEV--PGVKGRRPTTRRLPFGDIDKARVQV 153


>gi|205373421|ref|ZP_03226225.1| hypothetical protein Bcoam_09030 [Bacillus coahuilensis m4-4]
          Length = 112

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 49/82 (59%), Gaps = 1/82 (1%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           ++L++++++D G + + +C  +S+ +   +D  + I+ +Y LEVSSPG +RP+ ++ DF 
Sbjct: 1   MVLRVYIDKDAG-VDIEECGIVSERLGEKIDELDPIQHNYFLEVSSPGAERPLKKEKDFE 59

Query: 111 RWNGHVVACEIVLSSGDKQKLI 132
           +  G  V  +       +++L 
Sbjct: 60  KAVGKQVYVKTYEPIEGEKELK 81


>gi|303233384|ref|ZP_07320053.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
 gi|302480513|gb|EFL43604.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
          Length = 157

 Score =  107 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 5/127 (3%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDG---NMTLRDCEE 71
                L   + S ++          V + +       ++++ ++  D     ++L +  +
Sbjct: 1   MTPEALRTALLSALEQAAPAHGIDIVDVEIAGSSRAPIIRLRIDNADESLPTISLDEVAQ 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
             + I+  LD  + IEG Y LEVSSPG+ RP+ +  DF R+    V  +   +   +++ 
Sbjct: 61  QHEWINATLDEMDPIEGSYTLEVSSPGLARPLRKHHDFERFAHETVQLQTNNT-EGRKRF 119

Query: 132 IGKIMGT 138
            G++ G 
Sbjct: 120 SGELCGI 126


>gi|315104206|gb|EFT76182.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
          Length = 245

 Score =  107 bits (269), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--DDG-NMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++    DG   +L +  E +  IS
Sbjct: 70  AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 129

Query: 78  PILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGK 134
             LD    + E  Y LEVSS G+  P+ +   + R  GH+V   +  + G K  +   G+
Sbjct: 130 HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEGQKSGETFDGR 189

Query: 135 IMGTSETGFFLEKEKRGEKDMNEL--QIAISFDSLLSARLIVTDELLRASLNNYG 187
           I    E    LE E    K    +     +    +  A  +V  EL R       
Sbjct: 190 IAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 242


>gi|325067075|ref|ZP_08125748.1| ribosome maturation protein RimP [Actinomyces oris K20]
          Length = 172

 Score =  107 bits (269), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 10/171 (5%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGN--M 64
             + +PR   D  LA  ++ ++ P++ +       +         ++++FV+  DG   +
Sbjct: 5   DQRKDPRQRAD-ALARSLADLLSPIVNDAGLHLESVETTRAGKYSVVRVFVDLLDGPGDL 63

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            L     ++ AIS  LD  + ++G Y LEVS+PG +R +     F R  GH         
Sbjct: 64  DLDALGPVTAAISQALDEADPVKGQYTLEVSTPGAERELTTLRHFRRAVGHSARVRTADD 123

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKR-GEKDMNELQIAISFDSLLSARLIV 174
                +L G +    E     +        +++ ++  I+   +  AR+++
Sbjct: 124 -----ELTGVVTAAEEDDEASDHNGGMVGIEVDGVERRIALGDITEARMVL 169


>gi|269792607|ref|YP_003317511.1| hypothetical protein Taci_0997 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100242|gb|ACZ19229.1| protein of unknown function DUF150 [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 150

 Score =  107 bits (269), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 14/150 (9%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
              I+ ++E++ +  V++ L+ +    ++++ ++  D  +   DCE +S+ +  +LD E 
Sbjct: 10  KDRIRRLVEDLGYICVEVKLVRDLGGQVVRVTIDSPDAPIGHGDCEAVSRKVGELLDGEG 69

Query: 85  --IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              ++G Y LEVSSPG +RP++   DF R+ G  +        G  +K    I    + G
Sbjct: 70  EGFLKGRYYLEVSSPGPNRPLLSLDDFRRFKGSKIRVST----GKGKKRTYFIDDVFDDG 125

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                           ++   +  L + RL
Sbjct: 126 MV-------RLVHEGEELVCPWGDLKNPRL 148


>gi|326333614|ref|ZP_08199852.1| hypothetical protein NBCG_05048 [Nocardioidaceae bacterium Broad-1]
 gi|325948595|gb|EGD40697.1| hypothetical protein NBCG_05048 [Nocardioidaceae bacterium Broad-1]
          Length = 166

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 11/159 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +A  I   +   ++ +      + +    K  +L+I V++ DG +T  +  E ++ 
Sbjct: 11  RKDAIASAIDKALADPLQALGLDIEAVEITPAGKRRILRIAVDK-DGGITHEEVTEATRE 69

Query: 76  ISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           ++ +LD  +++ E  Y LEV+SPG+DRP+     + R  G +V         D     G+
Sbjct: 70  VNRVLDESDVMGEQPYTLEVTSPGVDRPLTLPRHWRRNKGRLVKVTAT----DGSTFTGR 125

Query: 135 IMGTSETGFFLEKEKRGEK----DMNELQIAISFDSLLS 169
           +  + E    LE   +  +    D+ +  + I F  +  
Sbjct: 126 VKESDEDRVSLEVSGKRREVAYADVKKALVQIEFKRIDE 164


>gi|227486446|ref|ZP_03916762.1| protein of hypothetical function DUF150 [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227235627|gb|EEI85642.1| protein of hypothetical function DUF150 [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 147

 Score =  107 bits (268), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 11/152 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   + + ++  IE + +  V +  +  K    L  ++ ++DG +T+ DCE +S  + 
Sbjct: 1   MDLIEKLKNALESDIENLGYDLVDLEFIGGKDGNRLIFYIYKEDG-ITIDDCERVSGFLD 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSS  + RP+    D LR    ++  ++     +   ++ K+  
Sbjct: 60  EKLDELDLIKSSYYLEVSSQDLSRPLKTDKDLLRNKDELLKIKLK----NGDLILAKMKD 115

Query: 138 TSETGFFLEKEKRG-----EKDMNELQIAISF 164
             +      KE        + D+ E++I I F
Sbjct: 116 IKDESIVFAKEDGKDIEINKSDIKEIKIEIVF 147


>gi|312892422|ref|ZP_07751917.1| protein of unknown function DUF150 [Mucilaginibacter paludis DSM
           18603]
 gi|311295206|gb|EFQ72380.1| protein of unknown function DUF150 [Mucilaginibacter paludis DSM
           18603]
          Length = 161

 Score =  107 bits (268), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 16/166 (9%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   ++ +++  I +      V + +L  +   L I V+ D G + + DC  +S+ + 
Sbjct: 1   MNIEKRVALLVEEKIADRPELFLVDVKMLPNRK--LIILVDGDAG-IGIADCAAISRFVG 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ +N+IE  Y LEVSSPGID P+     + +  G  ++ ++     D Q   GK++ 
Sbjct: 58  FKLEEDNVIEEAYNLEVSSPGIDSPLTLIRQYTKNIGRDLSVKMT----DGQLREGKLLS 113

Query: 138 TSETGFFLEKE--------KRGEKDMNELQIAISFDSLLSARLIVT 175
            +E    ++++            K    ++  I    +  A+++++
Sbjct: 114 LAEDAIVIDEKIKAVRKAPGEKGKKAEVVESTIPLTEIAEAKVLIS 159


>gi|313676537|ref|YP_004054533.1| hypothetical protein Ftrac_2447 [Marivirga tractuosa DSM 4126]
 gi|312943235|gb|ADR22425.1| protein of unknown function DUF150 [Marivirga tractuosa DSM 4126]
          Length = 157

 Score =  107 bits (268), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           GL   I + +  +I E  +  V I +     L + + ++ D+G +++  C  +S+ ++  
Sbjct: 3   GLDEKIKAYLGEIITEPQYFIVDIVISGNDKLKIVVLLDGDEG-VSIDYCASVSRQLAHR 61

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           ++ + ++E  Y LEVSSPG+D P+     +L+  G  V  +      D + + G+++   
Sbjct: 62  MEEDEVLEKAYVLEVSSPGLDHPLTNLRQYLKNIGRKVKVDTT----DGKAIRGELLEAK 117

Query: 140 ETGFFLEK--EKRGEKDMNELQIAISFDSLLSARLIVT 175
           E    + +  +++G+K +   +  +SF+++   +++V+
Sbjct: 118 EDFILVNQEIKEKGKKKIKLEETKVSFENIDKTKVLVS 155


>gi|291298940|ref|YP_003510218.1| hypothetical protein Snas_1418 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568160|gb|ADD41125.1| protein of unknown function DUF150 [Stackebrandtia nassauensis DSM
           44728]
          Length = 162

 Score =  107 bits (268), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILD 81
             I +V++PV+ E  +   ++ + +     L ++ V+RD G + L     +S+ +S  LD
Sbjct: 7   KRILAVLEPVLAEAGYDLEELKVSQAGRRTLVRVLVDRDAG-VDLDAIASVSRVLSKALD 65

Query: 82  VENIIEG-----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                +G      Y LEVSSPG+DRP+     + R  G +V+  +  +      +  +I 
Sbjct: 66  KSEADDGPFATNSYTLEVSSPGVDRPLTLPRHWRRNVGRLVSVRLSDA-----TVTARIH 120

Query: 137 GTSETGFFLEKEKRGEK----DMNELQIAISFD 165
              +    LE      +    D+   ++ + F 
Sbjct: 121 AADDENVELELSDGTRRVAYGDLGPGRVQLEFS 153


>gi|309804436|ref|ZP_07698504.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
 gi|308166249|gb|EFO68464.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
          Length = 115

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE--NIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD+   + + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
             Y LE+SSPG++RP+  ++D+ +     V   +      ++
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKLMGRK 102


>gi|117928725|ref|YP_873276.1| hypothetical protein Acel_1518 [Acidothermus cellulolyticus 11B]
 gi|259585656|sp|A0LV30|RIMP_ACIC1 RecName: Full=Ribosome maturation factor rimP
 gi|117649188|gb|ABK53290.1| protein of unknown function DUF150 [Acidothermus cellulolyticus
           11B]
          Length = 170

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 17/154 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++ PV+         ++LL+ +    L+I V++ DG + L +    SQAIS  L
Sbjct: 7   AQRLAELLAPVVAGQGLDLEGVTLLDHRTSAHLRIVVDK-DGGVQLDEIAAASQAISHFL 65

Query: 81  D---VENII--EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D     + I     Y LEVSSPGIDRP+V    + R  G +V  ++         ++ ++
Sbjct: 66  DNDAEADAIIGPRSYTLEVSSPGIDRPLVEPRHWRRAIGRLVRVQLPDLGP----VVARV 121

Query: 136 MGTSETGFFL------EKEKRGEKDMNELQIAIS 163
              +     L        +    +   E  +AI+
Sbjct: 122 QDVTGDQVRLGIEWQYTDDGACVRQYEERTVAIA 155


>gi|29829096|ref|NP_823730.1| hypothetical protein SAV_2554 [Streptomyces avermitilis MA-4680]
 gi|34223104|sp|Q82K50|RIMP_STRAW RecName: Full=Ribosome maturation factor rimP
 gi|29606202|dbj|BAC70265.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 169

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++         I +    +  +L++ V+ D+G   L    ++S+A+S  L
Sbjct: 6   SERLRELLEPLVGSQGLDLEGIEVESVGRKRVLRVVVDSDEGA-DLDAIADVSRALSAKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + EG Y LEV +PG +R +     ++R    +V  ++        +L+ +I+   
Sbjct: 65  DETDAMGEGEYTLEVGTPGAERALTEHRHYVRAVDRLVRFQLTEGD----ELVARILTVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G  LE    G K        ++F+ +  AR+ V
Sbjct: 121 DAGLDLEV--PGVKGRKATTRRLAFEDIAKARVQV 153


>gi|254458920|ref|ZP_05072343.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
 gi|207084191|gb|EDZ61480.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
          Length = 149

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 23/160 (14%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QI------FVERDDGNMTLRDCEE 71
           M L  DI+S+++ V           +++ E +  + +I       V+     ++L  C  
Sbjct: 1   MSLESDINSLVKSV----DLELYDATVVSENDETIYRISVISKEIVDGKRSGISLDACVN 56

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           L+  ISP+LDV   + G YRLEV SPGI+R +     FL   G  ++  +     +K+K 
Sbjct: 57  LTHLISPLLDVTPPVSGDYRLEVGSPGIERKLSSLKHFLLSIGENISLLLT----NKEKY 112

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            GK++   ++  FL              + I F  +L A+
Sbjct: 113 KGKLVKVKDSKIFLNVGDEK--------VEIDFYEILKAK 144


>gi|212704655|ref|ZP_03312783.1| hypothetical protein DESPIG_02718 [Desulfovibrio piger ATCC 29098]
 gi|212671889|gb|EEB32372.1| hypothetical protein DESPIG_02718 [Desulfovibrio piger ATCC 29098]
          Length = 244

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 68/193 (35%), Gaps = 38/193 (19%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD--------------- 60
             +  L   ++ +  P+++        + + +     +++FV+                 
Sbjct: 1   MSENSLKETVTRLATPLVQAQGLEIWGVEIAQAGRTTVRVFVDLPLEVKQAQAALSADSD 60

Query: 61  -------------DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
                          + ++  CEE+S+ +   L+VE++IE  Y LEVS+PG  R      
Sbjct: 61  PADNLEDSADIMAARSASIDQCEEISRQLGLALEVEDLIEQAYVLEVSTPGFSRLFFSLD 120

Query: 108 DFLRWNGHVVACEIVLSSGD------KQKLIGKIMGTSETGFFL----EKEKRGEKDMNE 157
               + G +V   +V +         ++   G +   +++   +       +        
Sbjct: 121 QMRSYVGDMVELRMVSAYAPENAPAARRAWRGVLREVTDSAVRVAPASVSAEGDICPEAM 180

Query: 158 LQIAISFDSLLSA 170
            ++ + +D +  A
Sbjct: 181 DEVLVPWDMVRRA 193


>gi|302554521|ref|ZP_07306863.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302472139|gb|EFL35232.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 169

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I++    +  +L++ V+ D G   L    ++S+A+S  L
Sbjct: 6   SERLRELLEPLVNSQGLDLDEIAVDSVGRKRVLRVVVDSDTGA-DLDRIADVSRALSAKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + EG Y LEV +PG +RP+     ++R    +V  ++        +L+ +I+   
Sbjct: 65  DETDAMGEGEYTLEVGTPGAERPLTEHRHYVRATDRLVKFQLAEGD----ELVARILKVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G   + E  G K        I+FD ++ AR+ V
Sbjct: 121 DEGV--DAEVPGVKGRKATARRIAFDDIVRARVQV 153


>gi|87125355|ref|ZP_01081201.1| hypothetical protein RS9917_08055 [Synechococcus sp. RS9917]
 gi|86167124|gb|EAQ68385.1| hypothetical protein RS9917_08055 [Synechococcus sp. RS9917]
          Length = 155

 Score =  105 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 2/146 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN-MTLRDCEELSQAISP 78
           L  D+++V     +   F    + ++   + + LQI + R +G+ ++L DC  LS  +  
Sbjct: 5   LLPDLTAVAASTAQAHGFELADVQVMTHLQPMTLQIQIRRSNGDDVSLDDCARLSAPMGD 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +D   +    Y LE+SSPGI   +    DF  +  + +        G +Q+  G ++  
Sbjct: 65  AIDNAALPIEAYVLEISSPGIGDQLQTDRDFRTFRSYPIEVIYRDDEGGEQRQQGSLLER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISF 164
           ++    L    R ++   +  IA+  
Sbjct: 125 TDEHIHLNVRGRIKRISRQAVIAVQL 150


>gi|78776877|ref|YP_393192.1| hypothetical protein Suden_0678 [Sulfurimonas denitrificans DSM
           1251]
 gi|91208367|sp|Q30SS4|RIMP_SULDN RecName: Full=Ribosome maturation factor rimP
 gi|78497417|gb|ABB43957.1| Protein of unknown function DUF150 [Sulfurimonas denitrificans DSM
           1251]
          Length = 149

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 19/154 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV------ERDDGNMTLRDCEELSQAIS 77
           +   I+  ++ +     +IS+  + +  + ++ V      +     ++L +C  LS+ IS
Sbjct: 3   LEKDIESFVKSLDLELYEISVARDGDDSIYRVNVLSTQIEDGKKKGVSLDECVHLSRLIS 62

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDV   + G YRLEV +PGI+R +     F+   G  VA  +      K+KL G ++ 
Sbjct: 63  PLLDVTPPMSGEYRLEVGTPGIERKVSTLKQFVLSIGERVALTLKS----KEKLKGLLLR 118

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             E+  +L        D++  ++ + F  +  A+
Sbjct: 119 VEESNIYL--------DVDAEEVCVEFAQISKAK 144


>gi|184201253|ref|YP_001855460.1| hypothetical protein KRH_16070 [Kocuria rhizophila DC2201]
 gi|259585800|sp|B2GKR8|RIMP_KOCRD RecName: Full=Ribosome maturation factor rimP
 gi|183581483|dbj|BAG29954.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 163

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 11/156 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGN--MTLRDCEELSQAISPI 79
             I + ++PV+        +  L  +     LQ+ V+  DG   + L     ++Q IS  
Sbjct: 7   APIRATVEPVVAAAGLHLEECELKGQGATRTLQVLVDLPDGTEALGLDRVAAVAQEISDA 66

Query: 80  LDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           LD ++ + G  Y LEVSSPG  R +     + R  GH+V    +    + ++   +++  
Sbjct: 67  LDRDDPVPGPPYELEVSSPGATRTLETPRHWRRTVGHLVRIRTL----EGERYTARLLEA 122

Query: 139 SETGFFLEKEKRGEKDMNELQI---AISFDSLLSAR 171
            E    +++  + +K M    +    + + S+ +AR
Sbjct: 123 HEDHAVVQRSHQPKKGMPVKLLDPERVDYASIRTAR 158


>gi|256832249|ref|YP_003160976.1| hypothetical protein Jden_1017 [Jonesia denitrificans DSM 20603]
 gi|256685780|gb|ACV08673.1| protein of unknown function DUF150 [Jonesia denitrificans DSM
           20603]
          Length = 177

 Score =  105 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 65/159 (40%), Gaps = 19/159 (11%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDD---GNMTLRDCEELSQA 75
            +   +   + P++ +       +  L       +++ V+  +   G + L     +S+ 
Sbjct: 5   DVPTQVHDAVAPIVHDAGLFLEDLEYLGSGPTTTIRVTVDLPEDVSGPVGLETISSVSRD 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  +++   Y LEVSSPG  RP+ +   F R  G +++ + V    + ++   ++
Sbjct: 65  LSTALDSVSVLHSQYTLEVSSPGTSRPLTQPRHFRRNVGRLISVKTV----NGERFTERL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +  ++     +  +            ++   +  A++ V
Sbjct: 121 VEVTDDAVLFDTRRH-----------VALADIRRAKVEV 148


>gi|259016313|sp|Q7U8L5|RIMP_SYNPX RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  ++ ++   V  +  F    I LL     + L++ + R +G ++ + DC   S  +  
Sbjct: 5   LLPELETLATSVAADQGFELCGIQLLTHLAPMTLEVHIRRSNGVDVNMDDCAGFSGTLGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+   ++   Y LE+SSPGI   +    DF  + G  V          +Q+L G ++  
Sbjct: 65  ALESAQLLTEAYVLEISSPGIGETLSSDRDFQTFRGFPVEVVHRDRDDTEQRLEGLLLER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            E    +    R ++        +  D +LS RL
Sbjct: 125 DEDTLQINIRGRIKR--------LPRDHVLSVRL 150


>gi|255033850|ref|YP_003084471.1| hypothetical protein Dfer_0034 [Dyadobacter fermentans DSM 18053]
 gi|254946606|gb|ACT91306.1| protein of unknown function DUF150 [Dyadobacter fermentans DSM
           18053]
          Length = 160

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 11/158 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   +  ++ P++E+     V I++   K +  + I V+ D+G +T++ C  +S+ ++
Sbjct: 1   MTVKEHLEVLLAPLLEDGDCFLVDIAIKPSKLSQKVTILVDSDEG-ITIQQCTSISRRLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+   +    Y LEVSSPG+D+P++    + +  G  +   +       + L G +  
Sbjct: 60  KQLEELEVFTQAYTLEVSSPGLDQPLLLPRQYKKNVGRNLKITLKS----GEILQGTLTD 115

Query: 138 TSETGFFLEK-----EKRGEKDMNELQIAISFDSLLSA 170
             ++   ++      + +   D   L   I+ D +  A
Sbjct: 116 AGDSDITIQLPAPKKKPKTPVDEASLVRTIALDDISKA 153


>gi|282854641|ref|ZP_06263976.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|282582223|gb|EFB87605.1| conserved hypothetical protein [Propionibacterium acnes J139]
          Length = 199

 Score =  105 bits (262), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--DDG-NMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++    DG   +L +  E +  IS
Sbjct: 24  AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 83

Query: 78  PILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGK 134
             LD    + E  Y LEVSS G+  P+ +   + R  GH+V   +  + G K  +   G+
Sbjct: 84  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEGQKSGETFDGR 143

Query: 135 IMGTSETGFFLEKEKRGEKDMNEL--QIAISFDSLLSARLIVTDELLRASLNNYG 187
           I    E    LE E    K    +     +    +  A  +V  EL R       
Sbjct: 144 IAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 196


>gi|94985334|ref|YP_604698.1| hypothetical protein Dgeo_1233 [Deinococcus geothermalis DSM 11300]
 gi|259585747|sp|Q1IZ05|RIMP_DEIGD RecName: Full=Ribosome maturation factor rimP
 gi|94555615|gb|ABF45529.1| protein of unknown function DUF150 [Deinococcus geothermalis DSM
           11300]
          Length = 155

 Score =  104 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 7/131 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           A ++ ++ + V++ + +  + + +    +  ++ I ++R D+  +T+ D E  S+A+   
Sbjct: 9   APNLRTLAEGVLQPLGYEVLDVQVQNPGRRPIVVIRMDRLDEQPVTVEDLETASRAVGAE 68

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            D  + I G YRLE+ SPG  RP+ R   + R  G           GD       I    
Sbjct: 69  FDRVDPIAGEYRLELESPGAKRPLTRARHYERMLGLKARVR-----GDGHSFTAPIKAVD 123

Query: 140 ETGFFLEKEKR 150
                 +    
Sbjct: 124 GEQVTFDVGGE 134


>gi|308176798|ref|YP_003916204.1| hypothetical protein AARI_10150 [Arthrobacter arilaitensis Re117]
 gi|307744261|emb|CBT75233.1| conserved hypothetical protein [Arthrobacter arilaitensis Re117]
          Length = 188

 Score =  104 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 78/158 (49%), Gaps = 13/158 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG--NMTLRDCEELSQAISP 78
           A  +++++   +E       ++SL    K +++QI V++ DG  ++ L +  E++  IS 
Sbjct: 12  AQRLTALLSKEVESHGLLLEEVSLRPSGKQMIVQIIVDKADGHESLNLDELGEVTTTISN 71

Query: 79  ILDVENIIEGH--YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD + +      Y LEVSSPG+ RP+  +  ++R    +V   +     D  KL G+++
Sbjct: 72  ALDKDAVYASAAPYELEVSSPGLSRPLTAQRHWIRAINRMVKISL----ADGTKLRGRLL 127

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAIS----FDSLLSA 170
             +++   + + +   K   ++++       F+++  A
Sbjct: 128 EVNDSDVLVAEHREPAKKGMKVKVLDPATHAFENIRKA 165


>gi|297202731|ref|ZP_06920128.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297148178|gb|EFH28865.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 165

 Score =  104 bits (261), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I++    +  +L++ V+ D G   L    ++S+A+S  L
Sbjct: 6   SERLRELLEPLVTSQGLDLEEIAVDSVGRKRVLRVVVDSDTGA-DLDQIADVSRALSAKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + +  G Y LEV +PG +R +     ++R    +V  ++     +  +L+ +I+   
Sbjct: 65  DESDAMGAGEYTLEVGTPGAERLLKEHRHYVRAVSRLVKFQLT----EGGELVARILKVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G  L+ E  G K        ++F  +  AR+ V
Sbjct: 121 DDG--LDVEVPGVKGRKATARRLAFSEVDKARVQV 153


>gi|314923906|gb|EFS87737.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
 gi|314966034|gb|EFT10133.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
 gi|314981919|gb|EFT26012.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
 gi|315090734|gb|EFT62710.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
 gi|315094982|gb|EFT66958.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
 gi|327328083|gb|EGE69852.1| hypothetical protein HMPREF9341_01135 [Propionibacterium acnes
           HL103PA1]
          Length = 178

 Score =  103 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--DDG-NMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++    DG   +L +  E +  IS
Sbjct: 3   AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 62

Query: 78  PILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGK 134
             LD    + E  Y LEVSS G+  P+ +   + R  GH+V   +  + G K  +   G+
Sbjct: 63  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEGQKSGETFDGR 122

Query: 135 IMGTSETGFFLEKEKRGEKDMNEL--QIAISFDSLLSARLIVTDELLRASLNNYG 187
           I    E    LE E    K    +     +    +  A  +V  EL R       
Sbjct: 123 IAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 175


>gi|289426404|ref|ZP_06428147.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|289153132|gb|EFD01850.1| conserved hypothetical protein [Propionibacterium acnes SK187]
          Length = 197

 Score =  103 bits (259), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 11/175 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--DDG-NMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++    DG   +L +  E +  IS
Sbjct: 22  AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 81

Query: 78  PILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGK 134
             LD    + E  Y LEVSS G+  P+ +   + R  GH+V   +  +   K  +   G+
Sbjct: 82  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGR 141

Query: 135 IMGTSETGFFLEKEKRGEKDMNEL--QIAISFDSLLSARLIVTDELLRASLNNYG 187
           I    E    LE E    K    +     +    +  A  +V  EL R       
Sbjct: 142 IAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 194


>gi|226226959|ref|YP_002761065.1| hypothetical protein GAU_1553 [Gemmatimonas aurantiaca T-27]
 gi|259585777|sp|C1A8N5|RIMP_GEMAT RecName: Full=Ribosome maturation factor rimP
 gi|226090150|dbj|BAH38595.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 155

 Score =  103 bits (259), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 7/151 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER-DDGNMTLRDCEELSQAISPILDV 82
           I  ++   +  + F  V++     +   +L+I ++R D+  +T+ DC  +S+A+   L+ 
Sbjct: 5   IEPIVTQELAGLGFDLVELRRGGSRARPVLEIRIDRRDEEKVTIDDCARVSRALEARLEA 64

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
             ++   Y LEVSSPG DRP+   +D+ R+ G        L +G KQ++   I+  +  G
Sbjct: 65  AALVGEQYVLEVSSPGADRPLRHAADWRRFVGRRATVTSGLLAGGKQEVE--IVAVTGEG 122

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                E    +D    ++++    +  ARL 
Sbjct: 123 ---GAEVALVRDPKGREVSVPLREVSQARLA 150


>gi|294631731|ref|ZP_06710291.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292835064|gb|EFF93413.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 169

 Score =  103 bits (259), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 73/155 (47%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I++    +  +L++ V+ D G   L    ++S+A+S  L
Sbjct: 6   SERLRELLEPLVASQGLDLEEIAVDSVGRKRVLRVVVDSDTGA-DLDQIADVSRALSAKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + EG Y LEV +PG +R +     ++R  G +   ++     +  +L+ +I+   
Sbjct: 65  DESDAMGEGEYTLEVGTPGAERLLTEHRHYVRATGRLAKFQL----AEGGELVARILRVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G  LE      +     ++A     ++ AR+ V
Sbjct: 121 DEGLDLEVPGVKGRKATTRRVAFP--DVVRARVQV 153


>gi|46198658|ref|YP_004325.1| putative cytoplasmic protein [Thermus thermophilus HB27]
 gi|55980671|ref|YP_143968.1| hypothetical protein TTHA0702 [Thermus thermophilus HB8]
 gi|51316688|sp|Q72KG3|RIMP_THET2 RecName: Full=Ribosome maturation factor rimP
 gi|62299029|sp|Q56425|RIMP_THET8 RecName: Full=Ribosome maturation factor rimP
 gi|46196281|gb|AAS80698.1| hypothetical cytosolic protein [Thermus thermophilus HB27]
 gi|55772084|dbj|BAD70525.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 157

 Score =  103 bits (259), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 8/137 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
           G   +  D+  +++  +  +    +++     +  LL     +D+  +T+ D EE S+ I
Sbjct: 11  GGGEVTVDLWQLVEEAVSPLGLDVLEVHF--ARGELLVRLERKDERPITVADLEEASRHI 68

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              LD E+ I G YRL V SPG  RP+  +  F R+ G      +       +   G+I+
Sbjct: 69  EAALDREDPIPGSYRLLVESPGPKRPLFTRRHFERFQG------LKAKVPGPEGFTGRIL 122

Query: 137 GTSETGFFLEKEKRGEK 153
                    +      +
Sbjct: 123 RVEGEEVVFQVGDEERR 139


>gi|327403852|ref|YP_004344690.1| Ribosome maturation factor rimP [Fluviicola taffensis DSM 16823]
 gi|327319360|gb|AEA43852.1| Ribosome maturation factor rimP [Fluviicola taffensis DSM 16823]
          Length = 158

 Score =  103 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 81/159 (50%), Gaps = 13/159 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  + +  I+E   R   + L      ++++ +++ +GN+++ DC  +S+ I   LD 
Sbjct: 5   QTVKELAEERIKERDERLFIVELTISSTNVIRLELDKTEGNVSIEDCMSVSRNIEHNLDR 64

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     + L VSS G+D+P+   + +++  G  +  ++      K+K+ G ++   ETG
Sbjct: 65  ED---ADFELSVSSAGLDKPLRVHAQYVKNIGRGLDVKLKS----KEKVTGTLISVDETG 117

Query: 143 FFLE------KEKRGEKDMNELQIAISFDSLLSARLIVT 175
             L+       E + +K++  ++  I+F  +  A+++++
Sbjct: 118 VVLQHEEKQAIEGKKKKELVVIENKIAFSDINEAKIVIS 156


>gi|256379833|ref|YP_003103493.1| hypothetical protein Amir_5837 [Actinosynnema mirum DSM 43827]
 gi|255924136|gb|ACU39647.1| protein of unknown function DUF150 [Actinosynnema mirum DSM 43827]
          Length = 174

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 13/153 (8%)

Query: 21  LAGDISSVIQPVIEEMSF--RSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           LA  ++ V++  +E + +    + +     +  L+++ V+ D+G + L +  + S+A+S 
Sbjct: 9   LAAQLTPVVREAVEAIGYDLELLDV-NQAGRRRLVKVVVDGDEG-IGLDEVAQASRAVSA 66

Query: 79  ILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            LD  E++I G Y LEV+SPG DRP+ R   +LR    +V  +      ++ +  G++  
Sbjct: 67  ALDANEHLIAGPYTLEVTSPGADRPLTRPRHWLRARLRLVKVK----QPEQVEWFGRVGD 122

Query: 138 TSETGFFLEKEKRGEK----DMNELQIAISFDS 166
             +TG  L  +    +     +    + + F  
Sbjct: 123 CDDTGVVLLVKGELRRVEYSAIERAVVEVEFKQ 155


>gi|332670043|ref|YP_004453051.1| hypothetical protein Celf_1529 [Cellulomonas fimi ATCC 484]
 gi|332339081|gb|AEE45664.1| protein of unknown function DUF150 [Cellulomonas fimi ATCC 484]
          Length = 193

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 17/166 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFV----ERDDGNMTLRDCEELSQAIS 77
           A  +  V++P + E+      + +       +   V    E D+G + L    E+++A+S
Sbjct: 7   AQRVRQVVEPAVAEVGLLLEDVEVTRAGAHSVVRVVVDVPEDDEGELDLDRVAEVTRAVS 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD ++++ G Y LEVSSPG+ RP+ ++  F R  G  V+  +V    D   + G++  
Sbjct: 67  DALDAQDVVAGEYTLEVSSPGVSRPLTQRRHFARAVGRSVSVRLV----DGGSVSGRLTA 122

Query: 138 TSETGFFLEKEK---------RGEKDMNELQIAISFDSLLSARLIV 174
                   +            +G +  N   + I    +  AR+ V
Sbjct: 123 VERGAQDADDAVVVVPVTPGLKGRRPKNGAPVRILLADVRDARVEV 168


>gi|114777566|ref|ZP_01452547.1| hypothetical protein SPV1_07661 [Mariprofundus ferrooxydans PV-1]
 gi|114552037|gb|EAU54554.1| hypothetical protein SPV1_07661 [Mariprofundus ferrooxydans PV-1]
          Length = 158

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 8/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I S+++P+++E+    ++ISL     N LL++ V++  G +     E +S+ ++  
Sbjct: 1   MESKIESLLRPIVDELGVEIIKISLGGGGHNPLLKVVVDKA-GGVDSGMLERISRGLALQ 59

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-T 138
           LDVE++I+  +RLEV++PG+D P+   +DF R+ G  +         D     G+ +G  
Sbjct: 60  LDVEDLIKSAFRLEVTTPGLDWPLTTNADFERYRGEWLKV----MFADGSSQEGRNLGPV 115

Query: 139 SETGFFLEKEKRGEKDMNELQIAI-SFDSLLSA 170
           S+  F L  E        E  I +   + ++ A
Sbjct: 116 SDHAFMLLVEGSKRVKDQEQVIEMADVNKVVRA 148


>gi|291519297|emb|CBK74518.1| Uncharacterized protein conserved in bacteria [Butyrivibrio
           fibrisolvens 16/4]
          Length = 100

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 14/101 (13%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTL 66
           H+ YE R             +I P+++E+ F    +  ++E  +  L+ +++++ G +T+
Sbjct: 4   HTDYEKRT----------EELITPILDELGFELYDVEYVKEGADYYLRAYIDKE-GGITI 52

Query: 67  RDCEELSQAISPILDVENII--EGHYRLEVSSPGIDRPMVR 105
            DC ++S  ++ +LD E  I  +  Y  EVSSPG+ R + +
Sbjct: 53  DDCVDVSHRMNELLDAEPQIGGDEGYIFEVSSPGLGRILKK 93


>gi|119632744|gb|ABL84379.1| unknown [Streptococcus suis]
          Length = 99

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 6/101 (5%)

Query: 76  ISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           ISPILD    +     Y LEV+SPG++RP+       +  G  +  ++  +    +   G
Sbjct: 1   ISPILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIHVKLYQAIDKIKVFEG 60

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++    T   +E   +  K     ++ I + ++  ARL V
Sbjct: 61  TLLSFDGTDLIMEYMDKTRKK----EVTIPYQTVAKARLAV 97


>gi|50842973|ref|YP_056200.1| hypothetical protein PPA1495 [Propionibacterium acnes KPA171202]
 gi|289428787|ref|ZP_06430470.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|295131044|ref|YP_003581707.1| hypothetical protein HMPREF0675_4562 [Propionibacterium acnes
           SK137]
 gi|81611447|sp|Q6A7M3|RIMP_PROAC RecName: Full=Ribosome maturation factor rimP
 gi|50840575|gb|AAT83242.1| conserved protein [Propionibacterium acnes KPA171202]
 gi|289158185|gb|EFD06405.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|291375538|gb|ADD99392.1| conserved hypothetical protein [Propionibacterium acnes SK137]
 gi|313763590|gb|EFS34954.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
 gi|313773528|gb|EFS39494.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
 gi|313793984|gb|EFS42008.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
 gi|313801371|gb|EFS42622.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
 gi|313807950|gb|EFS46431.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
 gi|313811581|gb|EFS49295.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
 gi|313813359|gb|EFS51073.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
 gi|313816770|gb|EFS54484.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
 gi|313819519|gb|EFS57233.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
 gi|313822157|gb|EFS59871.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
 gi|313823609|gb|EFS61323.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
 gi|313825932|gb|EFS63646.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
 gi|313831321|gb|EFS69035.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
 gi|313834931|gb|EFS72645.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
 gi|313839908|gb|EFS77622.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
 gi|314914744|gb|EFS78575.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
 gi|314919294|gb|EFS83125.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
 gi|314920796|gb|EFS84627.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
 gi|314924648|gb|EFS88479.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
 gi|314930475|gb|EFS94306.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
 gi|314954367|gb|EFS98773.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
 gi|314957447|gb|EFT01550.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
 gi|314962085|gb|EFT06186.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
 gi|314963664|gb|EFT07764.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
 gi|314968508|gb|EFT12606.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
 gi|314974196|gb|EFT18292.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
 gi|314976695|gb|EFT20790.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
 gi|314978821|gb|EFT22915.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
 gi|314984333|gb|EFT28425.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
 gi|314986522|gb|EFT30614.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
 gi|314990881|gb|EFT34972.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
 gi|315079514|gb|EFT51507.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
 gi|315081256|gb|EFT53232.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
 gi|315083454|gb|EFT55430.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
 gi|315087140|gb|EFT59116.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
 gi|315089312|gb|EFT61288.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
 gi|315095335|gb|EFT67311.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
 gi|315099218|gb|EFT71194.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
 gi|315100431|gb|EFT72407.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
 gi|315106775|gb|EFT78751.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
 gi|327328402|gb|EGE70164.1| hypothetical protein HMPREF9338_01419 [Propionibacterium acnes
           HL096PA2]
 gi|327329732|gb|EGE71488.1| hypothetical protein HMPREF9337_01796 [Propionibacterium acnes
           HL096PA3]
 gi|327334249|gb|EGE75963.1| hypothetical protein HMPREF9344_01150 [Propionibacterium acnes
           HL097PA1]
 gi|327444189|gb|EGE90843.1| hypothetical protein HMPREF9571_02320 [Propionibacterium acnes
           HL043PA2]
 gi|327444932|gb|EGE91586.1| hypothetical protein HMPREF9570_01994 [Propionibacterium acnes
           HL043PA1]
 gi|327446417|gb|EGE93071.1| hypothetical protein HMPREF9568_00999 [Propionibacterium acnes
           HL013PA2]
 gi|327451994|gb|EGE98648.1| hypothetical protein HMPREF9584_02200 [Propionibacterium acnes
           HL092PA1]
 gi|327454969|gb|EGF01624.1| hypothetical protein HMPREF9581_01157 [Propionibacterium acnes
           HL087PA3]
 gi|327457745|gb|EGF04400.1| hypothetical protein HMPREF9586_00321 [Propionibacterium acnes
           HL083PA2]
 gi|328752172|gb|EGF65788.1| hypothetical protein HMPREF9563_02441 [Propionibacterium acnes
           HL020PA1]
 gi|328755196|gb|EGF68812.1| hypothetical protein HMPREF9579_01223 [Propionibacterium acnes
           HL087PA1]
 gi|328758324|gb|EGF71940.1| hypothetical protein HMPREF9588_00964 [Propionibacterium acnes
           HL025PA2]
 gi|328760060|gb|EGF73640.1| hypothetical protein HMPREF9343_02215 [Propionibacterium acnes
           HL099PA1]
 gi|332675924|gb|AEE72740.1| ribosome maturation factor RimP [Propionibacterium acnes 266]
          Length = 178

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 11/175 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--DDG-NMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++    DG   +L +  E +  IS
Sbjct: 3   AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 62

Query: 78  PILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGK 134
             LD    + E  Y LEVSS G+  P+ +   + R  GH+V   +  +   K  +   G+
Sbjct: 63  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGR 122

Query: 135 IMGTSETGFFLEKEKRGEKDMNEL--QIAISFDSLLSARLIVTDELLRASLNNYG 187
           I    E    LE E    K    +     +    +  A  +V  EL R       
Sbjct: 123 IAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 175


>gi|167950227|ref|ZP_02537301.1| 15 kDa protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 79

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 43/73 (58%)

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I+  Y LEVSSPG+DRP+   +DF R+ G  V  +  +  G++++  G + G 
Sbjct: 1   MLDVEDPIKEKYDLEVSSPGLDRPLFEAADFERFKGQRVRVKTRMKIGNQRRFSGTLCGL 60

Query: 139 SETGFFLEKEKRG 151
                 LE++ + 
Sbjct: 61  EGNTILLEEDAQA 73


>gi|311898672|dbj|BAJ31080.1| hypothetical protein KSE_53040 [Kitasatospora setae KM-6054]
          Length = 184

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 8/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + ++++P+  +      ++ + +      +QI V+  DG + L    E S+ +S  L
Sbjct: 6   TDRLRALLEPLAADAGLDLEEVKVTQAGSRRQVQIDVD-ADGGVDLDAVAEFSRLVSRAL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D   ++ E  Y LEV SPG +RP+     + R  G + A ++V    D  +L  +++ + 
Sbjct: 65  DDSALMGETPYVLEVGSPGAERPLSEPRHWRRAVGRLAAVKLV----DGAELTARVLESD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E G  +E  +  +      +  + F  +  AR+ V
Sbjct: 121 EDGALVEV-QPVKGRGRPKERRLEFAEVARARVQV 154


>gi|312194981|ref|YP_004015042.1| hypothetical protein FraEuI1c_1099 [Frankia sp. EuI1c]
 gi|311226317|gb|ADP79172.1| protein of unknown function DUF150 [Frankia sp. EuI1c]
          Length = 277

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 11/154 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +I   +   +    F    +SL       +L++ V+RDDG + L    + S+ IS +LD
Sbjct: 22  AEIRDRLAEALARAGFDLDDLSLSRAGSRSVLRVAVDRDDG-IDLDAVADASRLISDLLD 80

Query: 82  VENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             +   + G Y LEV+SPG+DRP+     + R  G +V    V    D   ++G+++G  
Sbjct: 81  QVDEGGLAGAYVLEVTSPGVDRPLTEPRHWRRARGRLVEARRV----DGTVVLGRVLGAD 136

Query: 140 ETGFFLEKEKRGEKDMNELQIAIS---FDSLLSA 170
           + G  L       +    ++  I    F  +  A
Sbjct: 137 DEGVDLAVAAGPVRRGRPVKTKIERLRFADVARA 170


>gi|116073741|ref|ZP_01471003.1| hypothetical protein RS9916_34862 [Synechococcus sp. RS9916]
 gi|116069046|gb|EAU74798.1| hypothetical protein RS9916_34862 [Synechococcus sp. RS9916]
          Length = 155

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  D++SV      +  F    + L    + + +Q+ + R  G ++TL DC  LS  +  
Sbjct: 5   LLPDLTSVAAATAAQQGFELADLQLHTHLRPMTVQVQIRRPGGVDVTLDDCAGLSGPMGD 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            ++  +++   Y LE+SSPGI   +    DF  + G  V   I    G  Q L G ++  
Sbjct: 65  AIEASSLLTDAYVLEISSPGIGDLVQSDRDFQTFRGFPVEVTINEGDGPPQTLSGSLLDR 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           S+    +  + R +K        I+  S+   RL
Sbjct: 125 SDNHLEINMKGRIKK--------IARSSISCVRL 150


>gi|313829612|gb|EFS67326.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
 gi|315109016|gb|EFT80992.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
          Length = 178

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 11/175 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--DDG-NMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++    DG   +L +  E +  IS
Sbjct: 3   AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 62

Query: 78  PILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGK 134
             LD    + E  Y LEVSS G+  P+ +   + R  GH+V   +  +   K  +   G+
Sbjct: 63  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGR 122

Query: 135 IMGTSETGFFLEKEKRGEKDMNE--LQIAISFDSLLSARLIVTDELLRASLNNYG 187
           I    E    LE E    K          +    +  A  +V  EL R       
Sbjct: 123 IAEAGEEVVTLEVEAENSKPHKPLYTTREVQLADVAKA--VVQVELNRRDAQASK 175


>gi|313836821|gb|EFS74535.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
 gi|314929770|gb|EFS93601.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
 gi|314972199|gb|EFT16296.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
 gi|328907627|gb|EGG27391.1| hypothetical protein PA08_0657 [Propionibacterium sp. P08]
          Length = 178

 Score =  102 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 13/176 (7%)

Query: 22  AGDISSVIQPVIEEMSFRS--VQISLLEEKNLLLQIFVER--DDG-NMTLRDCEELSQAI 76
           A  ++S+++P +  +      V + +   +  L+++ V+    DG   +L +  E +  I
Sbjct: 3   AERLTSLLEPAVSRLGLELDCVDV-VPAGRRRLVRVTVDGDGPDGHGPSLDEISEATAEI 61

Query: 77  SPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG--DKQKLIG 133
           S  LD  + + E  Y LEVSS G+  P+ +   + R  GH+V   +  S G    +   G
Sbjct: 62  SRCLDDSDAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPSEGQTSGEAFDG 121

Query: 134 KIMGTSETGFFLEKEKRGEKDMNEL--QIAISFDSLLSARLIVTDELLRASLNNYG 187
           +I    E    LE E    K    +     +    +  A  +V  EL R       
Sbjct: 122 RITEAGEEVVTLEVEAGNSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 175


>gi|218296561|ref|ZP_03497289.1| protein of unknown function DUF150 [Thermus aquaticus Y51MC23]
 gi|218243103|gb|EED09635.1| protein of unknown function DUF150 [Thermus aquaticus Y51MC23]
          Length = 141

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 8/121 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +E +      + + E    +L     +D+  +T+ D E  S+ I  +LD E
Sbjct: 2   DLWQLVEEAVEPLDLEV--LEVKEAPGEVLVRLERKDEKPITVADLERASRHIEAVLDRE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G YRL V SPG  RP+  +  F R+ G      +       +  +G+I+       
Sbjct: 60  DPIPGSYRLLVESPGPKRPLFTRRHFERFQG------LKAKVPGPEGFVGRILRVEGDEV 113

Query: 144 F 144
            
Sbjct: 114 V 114


>gi|116490509|ref|YP_810053.1| hypothetical protein OEOE_0429 [Oenococcus oeni PSU-1]
 gi|118587524|ref|ZP_01544948.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163]
 gi|290889909|ref|ZP_06552996.1| hypothetical protein AWRIB429_0386 [Oenococcus oeni AWRIB429]
 gi|122277304|sp|Q04GN4|RIMP_OENOB RecName: Full=Ribosome maturation factor rimP
 gi|116091234|gb|ABJ56388.1| hypothetical protein OEOE_0429 [Oenococcus oeni PSU-1]
 gi|118431975|gb|EAV38717.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163]
 gi|290480519|gb|EFD89156.1| hypothetical protein AWRIB429_0386 [Oenococcus oeni AWRIB429]
          Length = 156

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 52/143 (36%), Gaps = 3/143 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPIL 80
              I   IQP++ E       +S       +L I ++  D   + +    E++  IS  L
Sbjct: 6   IDTIKEKIQPILSEKHLLLWDLSFFGGSPAVLTILIDGQDHQAIRMNQISEVTSLISDAL 65

Query: 81  D--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           D    +     Y L++SSPGIDR +          G  +   +       +   G +   
Sbjct: 66  DKVEPDPFPDRYNLDISSPGIDRSIKTDEHLDWALGQPIKLNLFEKIDGSKSAEGILKSF 125

Query: 139 SETGFFLEKEKRGEKDMNELQIA 161
           S+    LE      K+    +I+
Sbjct: 126 SDLEISLEVSPAEVKNFPREKIS 148


>gi|302558073|ref|ZP_07310415.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302475691|gb|EFL38784.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 173

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I++    +  +L++ V+ D G   L    ++S+A+S  L
Sbjct: 6   SERLRELLEPLVSSQGLDLEEIAVDSVGRKRVLRVVVDSDTGA-DLDRIADVSRALSAKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + +    Y LEV +PG +R +     ++R  G +V  ++     +  +L  +I+   
Sbjct: 65  DETDAMGSAEYTLEVGTPGAERLLTEHRHYVRATGRLVRFQL----AEGGELDARILRAD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G  LE    G K        ++FD +  AR+ V
Sbjct: 121 DEGLDLEV--PGVKGRKATARRLAFDDITRARVQV 153


>gi|284036132|ref|YP_003386062.1| hypothetical protein Slin_1213 [Spirosoma linguale DSM 74]
 gi|283815425|gb|ADB37263.1| protein of unknown function DUF150 [Spirosoma linguale DSM 74]
          Length = 170

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 21/173 (12%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFV--ERDDGNMTLRDCEELSQAI 76
           M     I+ ++QP ++   F  V I +   +   L++ +  + D G +T+ DC ++S+ +
Sbjct: 1   MDDKAKITELLQPYLKNDLFYIVDIQVAGRQGGRLKVTILLDSDAG-ITIDDCADISRRL 59

Query: 77  SPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
              +D  N      + LE+SSPG+D P+     F+R  G  +   +      K    G +
Sbjct: 60  GGQMDEMNFFGDSPFTLEISSPGVDYPLTFSRQFVRNVGRQLIVTLTDGVIRK----GVL 115

Query: 136 MGTSETGFFLEKEKRGEKDMNELQ-------------IAISFDSLLSARLIVT 175
              +E    L+ E   +    + +               I F  +  A++ V+
Sbjct: 116 ESVAEDHIVLDIEAEKKSKSKKKKDADVSPDLQPVGPTPILFGQIKKAQVEVS 168


>gi|297565904|ref|YP_003684876.1| hypothetical protein Mesil_1476 [Meiothermus silvanus DSM 9946]
 gi|296850353|gb|ADH63368.1| protein of unknown function DUF150 [Meiothermus silvanus DSM 9946]
          Length = 143

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 7/120 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVE-RDDGNMTLRDCEELSQAISPILDVEN 84
            V Q ++  M +  +++SL    N  +L + +E +D+  +++ + E  S+ +   LD  +
Sbjct: 2   EVAQDLLGPMGYDVLEVSLKGSGNSRVLTVRLERKDEVPISVEELERASRVLGSELDRLD 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           +IE  YRLEV SPG DRP++    F R+ G  +  ++    G+     G+I G SE    
Sbjct: 62  LIESAYRLEVESPGPDRPLLTPRHFERFAG--LKAKVRSPEGN---FTGRIEGVSEDTVT 116


>gi|312880099|ref|ZP_07739899.1| protein of unknown function DUF150 [Aminomonas paucivorans DSM
           12260]
 gi|310783390|gb|EFQ23788.1| protein of unknown function DUF150 [Aminomonas paucivorans DSM
           12260]
          Length = 151

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   + +  + ++  + ++ + +  + E    +L++ ++  +G ++L+DCE  ++ ++  
Sbjct: 5   LRPPLEAEFRKLVGGLGYQCLALEKVREGGRLVLRLTLD-VEGGISLQDCETAAREVNAF 63

Query: 80  LDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           LD  +      + LEVSSPG +RP+VR  D+ R+ G  +          K++++  I   
Sbjct: 64  LDEHDEAFSEPFFLEVSSPGPERPLVRLEDYRRFRGEWIRISWK---NGKKRVLC-IDDV 119

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            E G    + + GE       + + +  +   RL
Sbjct: 120 GEDGVVTLRSREGEV------LQLPWTEIRRPRL 147


>gi|326771739|ref|ZP_08231024.1| YhbC family protein [Actinomyces viscosus C505]
 gi|326637872|gb|EGE38773.1| YhbC family protein [Actinomyces viscosus C505]
          Length = 172

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 10/169 (5%)

Query: 10  KYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGN--MTL 66
           + +PR   D  LA  ++ ++ P++ +       +         ++++FV+  DG   + L
Sbjct: 7   RKDPRQRAD-ALARSLTDLLAPIVNDAGLHLESVETTRAGKYSVVRVFVDLVDGPGDLDL 65

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
                ++ AIS  LD  + ++G Y LEVS+PG +R +     F R  GH           
Sbjct: 66  DALGPVTAAISQALDEADPVKGQYTLEVSTPGAERELTTLRHFRRAVGHSARVGTADD-- 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKR-GEKDMNELQIAISFDSLLSARLIV 174
              +LIG +          +        +++ ++  I+   +  AR++V
Sbjct: 124 ---ELIGLVTAADADDEADDHNGGMVGIEVDGVEHRIALGDITEARMVV 169


>gi|290957022|ref|YP_003488204.1| hypothetical protein SCAB_25381 [Streptomyces scabiei 87.22]
 gi|260646548|emb|CBG69645.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 169

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +  +++P++        +I++    +  +L++ V+ D+G   L    ++S+A+S  L
Sbjct: 6   SERLRELLEPLVRSQGLDLEEIAVDSVGRKRVLRVVVDSDEGA-DLDAVADVSRALSAKL 64

Query: 81  DVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  + + +  Y LEV +PG +R +     + R    +V   +        +LI +I+   
Sbjct: 65  DETDAMGQSEYTLEVGTPGAERALTEHRHYRRAVDRLVKFTLREDG----ELIARILTVD 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G  LE    G K        ++FD +  AR+ V
Sbjct: 121 DEGLDLEV--PGVKGRRATSRRLAFDEIDRARVQV 153


>gi|315928474|gb|EFV07784.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 114

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNL-LLQIFVERD------DGNMTLRDCEELSQAISPILD 81
           ++ + +E++       L  E    + +++V +          + L DC  LS+ +SPI D
Sbjct: 3   LEALCKEVNLELYDSELTSENGKKIYRVYVMKPLDEKGERRGVNLDDCARLSEILSPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           VE  + G Y LEVSS G++R + +   F +    +V          KQK
Sbjct: 63  VEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVKITTGEKEKSKQK 111


>gi|78213594|ref|YP_382373.1| hypothetical protein Syncc9605_2078 [Synechococcus sp. CC9605]
 gi|123577663|sp|Q3AHW4|RIMP_SYNSC RecName: Full=Ribosome maturation factor rimP
 gi|78198053|gb|ABB35818.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 155

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 2/146 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  D+ ++   V     F    I LL     + L++ +    G +++L DC   S  +  
Sbjct: 5   LLPDLETLATKVAASKGFALCGIQLLTHMSPMTLEVQIRHSSGADVSLDDCAGFSGVLGD 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+   ++   Y LE+SSPGI   +    DF  + G  V          +Q+L G ++  
Sbjct: 65  ALEASTLLTDAYVLEISSPGIGDQLSSDRDFETFRGFPVEVHHRDKDDSEQRLEGLLLER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISF 164
                 +    R ++   +  I +  
Sbjct: 125 DADTLQINIRGRIKRIARDCVIGVRL 150


>gi|33865135|ref|NP_896694.1| hypothetical protein SYNW0601 [Synechococcus sp. WH 8102]
 gi|33638819|emb|CAE07116.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 166

 Score =  101 bits (252), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVEN 84
           ++   V  +  F    I LL     + L++ + R +G ++ + DC   S  +   L+   
Sbjct: 22  TLATSVAADQGFELCGIQLLTHLAPMTLEVHIRRSNGVDVNMDDCAGFSGTLGEALESAQ 81

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           ++   Y LE+SSPGI   +    DF  + G  V          +Q+L G ++   E    
Sbjct: 82  LLTEAYVLEISSPGIGETLSSDRDFQTFRGFPVEVVHRDRDDTEQRLEGLLLERDEDTLQ 141

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    R ++        +  D +LS RL
Sbjct: 142 INIRGRIKR--------LPRDHVLSVRL 161


>gi|213864825|ref|ZP_03386944.1| hypothetical protein SentesT_33610 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 82

 Score =  101 bits (252), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I         +  E
Sbjct: 3   AYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVE 62

Query: 149 KRGEKDMNELQIAISFDSLLSARLI 173
            + E          +  ++  A L+
Sbjct: 63  GKDEV--------FALSNIQKANLV 79


>gi|325282975|ref|YP_004255516.1| Ribosome maturation factor rimP [Deinococcus proteolyticus MRP]
 gi|324314784|gb|ADY25899.1| Ribosome maturation factor rimP [Deinococcus proteolyticus MRP]
          Length = 150

 Score =  101 bits (252), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 15/138 (10%)

Query: 38  FRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
           +  +++ +       +L + ++R D+  +++ D E  ++ +S  LD  + I G YRLEV 
Sbjct: 19  YELLEVQMQNASGRPVLLVRIDRADEQPVSVDDIERATRRLSLWLDEADPIGGEYRLEVE 78

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDM 155
           SPG  RP++R   F R  G           G +      I   S      +   +G+  +
Sbjct: 79  SPGAKRPLLRTRHFERMLGLKAKVR-----GGEHAFTAPIKAVSGETVTFDVPGQGDVTL 133

Query: 156 NELQIAISFDSLLSARLI 173
               I         A L 
Sbjct: 134 RIADI--------KANLA 143


>gi|307331527|ref|ZP_07610640.1| protein of unknown function DUF150 [Streptomyces violaceusniger Tu
           4113]
 gi|306882844|gb|EFN13917.1| protein of unknown function DUF150 [Streptomyces violaceusniger Tu
           4113]
          Length = 174

 Score =  100 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 7/152 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +  +  +++P++        ++ +       +   V   D  + L  C ELS+ IS  LD
Sbjct: 6   SERLRGLLEPLVSARDLDLEEVEVTPAGRRRVLRVVVDSDDGVQLDTCAELSRDISQTLD 65

Query: 82  VENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +    Y LEV+SPG +RP+     + R  G ++   +   +    +L+ +I+   +
Sbjct: 66  DTDAMGQVAYVLEVTSPGAERPLTEPRHYRRATGRLMRARLTDDA----ELVARIVSVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE    G K        ++F+ +  AR+
Sbjct: 122 EGLDLEV--PGVKGRKPTARRLAFEEISKARV 151


>gi|296269041|ref|YP_003651673.1| hypothetical protein Tbis_1058 [Thermobispora bispora DSM 43833]
 gi|296091828|gb|ADG87780.1| protein of unknown function DUF150 [Thermobispora bispora DSM
           43833]
          Length = 171

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 16/160 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G     G +  ++ PV+E        +++       +   V   DG +T+ +  ++S++
Sbjct: 1   MGSDARRGRLVELLGPVVEAKGLDLEDVTITSAGRRRIVRVVVDRDGGVTVDEIADVSRS 60

Query: 76  ISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +S  LD  +++    Y LEV+SPG+DRP+  +  + R  G +V   +     D   + G+
Sbjct: 61  VSDRLDEVDVLGDAPYVLEVTSPGVDRPLTEQRHWRRARGLLVKAVLR----DGGTVEGR 116

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           I   +ET   L+  +R           I    L+  R+ +
Sbjct: 117 ITDVTETEVELDGTRR-----------IPLADLVKGRVQL 145


>gi|297623579|ref|YP_003705013.1| hypothetical protein Trad_1348 [Truepera radiovictrix DSM 17093]
 gi|297164759|gb|ADI14470.1| protein of unknown function DUF150 [Truepera radiovictrix DSM
           17093]
          Length = 146

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 18/153 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE---KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           D+    + ++E + +  +++ +      +N+LL+I   RD G +T+ D E  +Q  S  L
Sbjct: 2   DLQRAAEQLLEPLGYEVLELVVSGRGGKRNVLLRID-RRDRGVVTMEDVERATQVFSLEL 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  +  EG YRLEV SPG +RP+     F R++G +            +   G+++  S+
Sbjct: 61  DRLDPFEGAYRLEVESPGPERPLRTAEHFRRFSGLLAKVRAH-----GETFTGRVVEVSD 115

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                        D++     ++ + +  ARL 
Sbjct: 116 AQVT--------FDVHGQPRTLALEDI-QARLA 139


>gi|226366089|ref|YP_002783872.1| hypothetical protein ROP_66800 [Rhodococcus opacus B4]
 gi|254806567|sp|C1B310|RIMP_RHOOB RecName: Full=Ribosome maturation factor rimP
 gi|226244579|dbj|BAH54927.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 190

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 12/150 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++ +I  +++   +    +++ L  K+  ++I V+ D G + L     LS  IS + D
Sbjct: 7   ERVTELISDLVQRQGYDVEDVAVTLAGKHSAVRIMVDSDAG-LELDAVANLSHEISEVFD 65

Query: 82  -VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            V +  E  Y LEV+SPGIDRP+  +  + R  G     ++       + ++G+I     
Sbjct: 66  SVSDFGESPYTLEVTSPGIDRPLTHERHWRRARGRKARIDLAH-----ETVVGRIGALDG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               +    R   D+      I+   +  A
Sbjct: 121 DSVAVVIGSRTGPDVR----RIALADIQKA 146


>gi|331698437|ref|YP_004334676.1| ribosome maturation factor rimP [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953126|gb|AEA26823.1| Ribosome maturation factor rimP [Pseudonocardia dioxanivorans
           CB1190]
          Length = 176

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 16/154 (10%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDG--NMTLRDCEELSQAIS 77
           L   +  V++P++    F   ++ +    +   +++ V+  D    + L D   LS+A S
Sbjct: 7   LGRQLQDVLEPIVAGAGFELDELDVRATGRRHTVKVVVDSADEAAGVNLDDIARLSRAAS 66

Query: 78  PILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             LD  E++I G Y LEV+SPGIDRP+ +   + R    +V   +V    +  KL G+I 
Sbjct: 67  AELDQHEHLIGGSYTLEVTSPGIDRPLTQPRHWRRAYLRLVEVTLV----EGGKLAGRIG 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              E    +  +            ++++  +  A
Sbjct: 123 RAGEDAVDVLVDGSVR--------SVAYADVAKA 148


>gi|148243066|ref|YP_001228223.1| hypothetical protein SynRCC307_1967 [Synechococcus sp. RCC307]
 gi|147851376|emb|CAK28870.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 185

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 11/162 (6%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDG-NMTLRDCE 70
           PR      L   I ++     + + F    + L   +    L + V + DG ++ L DC 
Sbjct: 28  PRALAHPPLEP-IEALASATAQSLGFLMESVVLHSHRAPQALIVAVRKGDGSDVNLDDCA 86

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
             SQA    L+   ++ G Y LE++SPG+   + +  DF  + G  V      + G + +
Sbjct: 87  SFSQAFGEALETGELLTGAYVLEITSPGLGDVLQQDRDFRSFRGFPVCVRQRDAKGGEIQ 146

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             G ++G       L    R ++        I    +L  RL
Sbjct: 147 REGTLLGRDADAVELNLRGRIQR--------IPRSDVLEVRL 180


>gi|256396851|ref|YP_003118415.1| hypothetical protein Caci_7750 [Catenulispora acidiphila DSM 44928]
 gi|256363077|gb|ACU76574.1| protein of unknown function DUF150 [Catenulispora acidiphila DSM
           44928]
          Length = 203

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 10/157 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G A  + ++++PV+    +    + + +         V   D  ++L    ++++ +S +
Sbjct: 8   GPADRLQALLEPVVAAAGYDLESVRVSQVARRRRVEVVVDGDDGVSLDAVSDITRVVSDV 67

Query: 80  LDVENII----EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LD    +    E  Y LEV SPG DRP+     + R  G +V   +     +   + G++
Sbjct: 68  LDAPEGVAVMGEQPYVLEVGSPGTDRPLTLPKHWRRAKGRLVRALLR----NGGDVTGRV 123

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + + + G  LE   + +    E ++   +  +  AR+
Sbjct: 124 LDSDDEGVLLEVPGKKKGQTEERRLE--YSEVAKARV 158


>gi|260436689|ref|ZP_05790659.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
 gi|260414563|gb|EEX07859.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
          Length = 155

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  D+ +++  V     F    I LL     + L++ +    G +++L DC   S  +  
Sbjct: 5   LLPDLETLVTDVASSKGFALCGIQLLTHMSPMTLEVQIRHSSGADVSLDDCAGFSGVLGD 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+   ++   Y LE+SSPGI   +    DF  + G  V      +   +Q+L G ++  
Sbjct: 65  ALEASTLLTDAYVLEISSPGIGDQLSSDRDFETFRGFPVEVHHRDNDDSEQRLEGLLLER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 +    R ++        I  D ++  RL
Sbjct: 125 DADTLQINIRGRIKR--------IPRDCVIGVRL 150


>gi|121609703|ref|YP_997510.1| hypothetical protein Veis_2751 [Verminephrobacter eiseniae EF01-2]
 gi|121554343|gb|ABM58492.1| protein of unknown function DUF150 [Verminephrobacter eiseniae
           EF01-2]
          Length = 295

 Score = 99.8 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 83/247 (33%), Gaps = 84/247 (34%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-------------RDDGNMTLR---- 67
           +  +++P++  + +  V+I        LL++ ++               DG + L     
Sbjct: 53  LQQIVEPIVTGLGYALVEIE--RSAGGLLRVTIDLPWPAPNGAAAEPAPDGALALEPAPS 110

Query: 68  -------------------------------------------DCEELSQAISPILDVEN 84
                                                      DCE++++ +   L+V+ 
Sbjct: 111 GAGTLDTAPDGATALETVPSGATALETAPNGAVSTPAQSVTLEDCEKVTRQLQFALEVDG 170

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---------KQKLIGKI 135
           +   + RLEV+SPGIDRP+  + D LR+ G V+   +    G          ++K  G +
Sbjct: 171 V--QYQRLEVASPGIDRPLRGEQDLLRFAGSVIDITLKAPIGGAAAGKVGATRKKFRGTL 228

Query: 136 MGTSETGFFL-----------EKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
             T+  G+ +           ++  +         +  S D +   RL    +    +  
Sbjct: 229 ERTASGGWQIVWSDAPPPKPGQRVGKKRLPAPLQALGFSLDEVRDMRLAPIVDFKGRTGK 288

Query: 185 NYGSYAG 191
              + AG
Sbjct: 289 AGAAPAG 295


>gi|311748746|ref|ZP_07722531.1| hypothetical protein ALPR1_20868 [Algoriphagus sp. PR1]
 gi|126577280|gb|EAZ81528.1| hypothetical protein ALPR1_20868 [Algoriphagus sp. PR1]
          Length = 157

 Score = 99.8 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 7/151 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +++  + + S   V+++L+ +    +L I ++ D G + ++ C  +S+A++  
Sbjct: 4   LKQAIEEIVEKHLPDESHFVVEVNLVPKSGKTVLSILIDADQG-LNVQTCANVSRAVAEE 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+ + ++   Y LEVSSPG+D P+  +  F +  G  +   +       Q+L GK++   
Sbjct: 63  LEAKELMSEAYILEVSSPGVDYPLSSRRQFQKNIGRELKVLLTS----GQELKGKLLEVD 118

Query: 140 ETGF-FLEKEKRGEKDMNELQIAISFDSLLS 169
            TG   L K+K   K   E ++ +SF+ +  
Sbjct: 119 TTGVKMLVKKKEKGKKATEEEVVLSFEEMKK 149


>gi|320531906|ref|ZP_08032816.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320135875|gb|EFW27913.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 172

 Score = 99.0 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 10/169 (5%)

Query: 10  KYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD---GNMTL 66
           + +PR   D  LA  ++ ++ PV+ +       +         +   +       G++ L
Sbjct: 7   RQDPRKRAD-ALARSLTDLLVPVVNDAGLHLEGVETTRAGKYSVVRVLVDLVDGPGDLDL 65

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
                ++ A+S  LD  + ++G Y LEVS+PG +R +     F R  GH V         
Sbjct: 66  DSLGPVTAAVSQALDEADPVKGQYTLEVSTPGAERELTTLRHFRRAVGHSVRVRTADD-- 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKR-GEKDMNELQIAISFDSLLSARLIV 174
              +L G +      G   E         ++ ++  I+   +  AR++V
Sbjct: 124 ---ELTGVVTAADGDGDASEHNGGMVRIKVDGVEDRIALGDITEARMVV 169


>gi|119717417|ref|YP_924382.1| hypothetical protein Noca_3193 [Nocardioides sp. JS614]
 gi|166988630|sp|A1SLL0|RIMP_NOCSJ RecName: Full=Ribosome maturation factor rimP
 gi|119538078|gb|ABL82695.1| protein of unknown function DUF150 [Nocardioides sp. JS614]
          Length = 175

 Score = 98.6 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 15/150 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           G I + +   +  +      + +    K  +L++ V++ DG +TL +  E ++ ++ +LD
Sbjct: 11  GQIEAELDDPLRALGLDIEAVEITPAGKRRILRVAVDK-DGGVTLDEVAEATREVNRVLD 69

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              ++ E  Y LEV+S G+DRP+     + R  G +V      +  D +   G+I+ ++E
Sbjct: 70  GSEVMGEQPYTLEVTSRGVDRPLTLPRHWRRNAGRLVKV----AFADGRAATGRILDSNE 125

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               L        D+   +  +++  +  A
Sbjct: 126 EQVTL--------DVGGTRQQVAYAEVKKA 147


>gi|213852789|ref|ZP_03382321.1| hypothetical protein SentesT_07966 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 82

 Score = 98.6 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I         +  E
Sbjct: 3   AYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVE 62

Query: 149 KRGEKDMNELQIAISFDSLLSARLI 173
            + E          +  ++  A L+
Sbjct: 63  GKDEV--------FALSNIQKANLV 79


>gi|302338536|ref|YP_003803742.1| protein of unknown function DUF150 [Spirochaeta smaragdinae DSM
           11293]
 gi|301635721|gb|ADK81148.1| protein of unknown function DUF150 [Spirochaeta smaragdinae DSM
           11293]
          Length = 175

 Score = 98.6 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 78/152 (51%), Gaps = 12/152 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           G ++  ++P+IE + +++V+++  +      + + +   D  + L DCE++ +AI P L+
Sbjct: 28  GPLTGELEPIIEGLGYKTVEVAAKKTGSRHHVSVIISGRDSGIGLTDCEKVHKAILPRLE 87

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +       Y  EVSSPGI R +   ++F  + G +V   +    G+ + ++G+IM + E 
Sbjct: 88  ILLDDRDIYV-EVSSPGISRNLKCGAEFGIFVGSLVRLLL---EGENEWIVGRIMESDER 143

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +E     ++D         +D++  A+L+
Sbjct: 144 KVVIEMSDGKKEDYL-------YDTIRKAKLV 168


>gi|325105521|ref|YP_004275175.1| protein of unknown function DUF150 [Pedobacter saltans DSM 12145]
 gi|324974369|gb|ADY53353.1| protein of unknown function DUF150 [Pedobacter saltans DSM 12145]
          Length = 153

 Score = 98.2 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 77/159 (48%), Gaps = 10/159 (6%)

Query: 19  MGLAGDISSVIQPVIEE-MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   +  + +  +++      V + +  +K  LL   ++ D+G +T+ DC ++S+ + 
Sbjct: 1   MSVEQRVRELAEEKLQDREDLFIVSVKVQNKKITLL---LDGDNG-ITIEDCAKVSRHVG 56

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ EN++   Y+LEV S G+D  +V    + +  G  +  +        + + GK++G
Sbjct: 57  YHLEEENLMTEAYQLEVGSAGLDAALVLDRQYQKNIGRNLLVK---KVDGSK-IEGKLIG 112

Query: 138 TSETGFFLEKE-KRGEKDMNELQIAISFDSLLSARLIVT 175
            + T   +  E K   K    ++  I  +++ SA++ ++
Sbjct: 113 ANPTNLVISHEVKEKGKKAQTVETVIEKENIASAKVSIS 151


>gi|317125352|ref|YP_004099464.1| hypothetical protein Intca_2228 [Intrasporangium calvum DSM 43043]
 gi|315589440|gb|ADU48737.1| protein of unknown function DUF150 [Intrasporangium calvum DSM
           43043]
          Length = 197

 Score = 98.2 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 23/188 (12%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNM------------T 65
           M     I + I+P +  +      +++ +  K  ++++ V+ D   +            +
Sbjct: 1   MSTVEQIRATIEPALVSLGLVIDDLAVNQAGKRRMVRVLVDSDIAGLDPSDATSPVPPLS 60

Query: 66  LRDCEELSQAISPILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           L D  + ++A+S  LD  +++    Y LEVSSPG+ RP+  + DF R  G +V       
Sbjct: 61  LDDIADATRAVSTRLDDSDVMGSMPYVLEVSSPGVGRPLRSRHDFRRQVGRLVDV----- 115

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           + +   + G+++        L+      K     Q+ ++ DS+  A + V  E  RA + 
Sbjct: 116 AHEGGSVTGRLIEVHPDRLVLQV--PATKKAAGHQLTLALDSVHQATVQV--EFKRAEVE 171

Query: 185 NYGSYAGL 192
                A L
Sbjct: 172 AAHPQAAL 179


>gi|326335428|ref|ZP_08201615.1| hypothetical protein HMPREF9071_1081 [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692194|gb|EGD34146.1| hypothetical protein HMPREF9071_1081 [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 154

 Score = 98.2 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 16/162 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  +I   ++E       I     K  L+++ ++ D+G + + DC  LS+AI  
Sbjct: 1   MNLKERVKYLIDKALKENP-SLFLIEYSIGKGNLIKVIIDGDNG-VNIDDCVILSRAIEH 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E   E  + LEVSS GI  P+ ++  +++  G  V  E   +     K IG I   
Sbjct: 59  NLDRE---EEDFSLEVSSCGIFAPLTQERQYIKNIGREVEIETTET-----KYIGVIKEV 110

Query: 139 SETGFFLEKEKR------GEKDMNELQIAISFDSLLSARLIV 174
            E    LE   R        K      I +  +++   +L +
Sbjct: 111 HEGKVSLEVTSRQPKANGKGKTTITETIVLPINNIKETKLKL 152


>gi|325000942|ref|ZP_08122054.1| ribosome maturation protein RimP [Pseudonocardia sp. P1]
          Length = 209

 Score = 98.2 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 14/160 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDG----NMTLRDCEELSQA 75
           LA  +  V++PV+ +       + +        +++ V+  +      + L D   LS+ 
Sbjct: 23  LADQLRGVLEPVVTDAGLEIDAVEVRTAGRRHAVKLVVDLPEASTATGIDLDDIARLSRT 82

Query: 76  ISPILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +  LD  E++IEG Y LEV+SPGIDRP+     + R    +    +         L  +
Sbjct: 83  AAAELDPHEHLIEGSYTLEVTSPGIDRPLTTPRHWRRNFLRLARITLAGGDD----LEAR 138

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           I    +    +    R + ++ E    I++D +  A++ V
Sbjct: 139 IGRAGDDRVQVAVPGRKQPELRE----IAYDDVTHAQVQV 174


>gi|148240412|ref|YP_001225799.1| hypothetical protein SynWH7803_2076 [Synechococcus sp. WH 7803]
 gi|166980273|sp|A5GNI7|RIMP_SYNPW RecName: Full=Ribosome maturation factor rimP
 gi|147848951|emb|CAK24502.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
          Length = 155

 Score = 97.8 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 2/146 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  DI+ V         F  V+I +L   + + +Q+ + R DG +++L DC   S  +  
Sbjct: 5   LLPDITPVAASTAAAHGFELVEIQILTHLQPMTVQVQIRRTDGSDVSLDDCAGFSGPMGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+ + ++   Y LE+SSPGI   +    DF  +  + V        G +Q+  G ++  
Sbjct: 65  ALESQALLTEAYVLEISSPGIGEQLQSDRDFQTFRSYPVEVLYRDDEGREQRQQGSLLER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISF 164
           +     +    R ++      I++  
Sbjct: 125 NADHVQVNVRGRIKRIARASVISVQL 150


>gi|257055489|ref|YP_003133321.1| hypothetical protein Svir_14540 [Saccharomonospora viridis DSM
           43017]
 gi|256585361|gb|ACU96494.1| uncharacterized conserved protein [Saccharomonospora viridis DSM
           43017]
          Length = 179

 Score = 97.8 bits (243), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           LA  +  ++   +    F    + + +  +  L+++ V+ D+G + L    E+S+A+S +
Sbjct: 5   LASRLEPLVAEAVGAAGFDLDALDVQQAGRRKLVKVVVDGDEG-VELDKVAEISRAVSAV 63

Query: 80  LDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           LD  + +I G Y LEV+SPG+DRP+ +   + R    +V              IG++   
Sbjct: 64  LDQHDHLIAGAYTLEVTSPGLDRPLTKPRHWRRSRNRLVRVTPKEGPA----YIGRVGAA 119

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            E    +  +             + +  +  A
Sbjct: 120 GEDSVRILVDGEIRD--------LRYADVRKA 143


>gi|303326258|ref|ZP_07356701.1| transcription elongation factor [Desulfovibrio sp. 3_1_syn3]
 gi|302864174|gb|EFL87105.1| transcription elongation factor [Desulfovibrio sp. 3_1_syn3]
          Length = 156

 Score = 97.8 bits (243), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 52/127 (40%), Gaps = 17/127 (13%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG------------- 62
             +  L   +  + +PV+  +      + +++   + +++FV+   G             
Sbjct: 23  MSENALKETVIRLAEPVVRSLGLVIWGVEVVQAGRMAVRLFVDVPSGAPESLQAADGEEN 82

Query: 63  ----NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
               + ++  CEE+S+ +   L+VE+ +   Y LEVS+PG+ R          + G +V 
Sbjct: 83  EAPTSASIGQCEEISRHLGLALEVEDAVPSAYVLEVSTPGLTRLFFSLDQMRPYLGDMVE 142

Query: 119 CEIVLSS 125
             +    
Sbjct: 143 ARLHAPV 149


>gi|259645134|sp|A5GVG1|RIMP_SYNR3 RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 97.4 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDG-NMTLRDCEELSQAISPIL 80
             I ++     + + F    + L   +    L + V + DG ++ L DC   SQA    L
Sbjct: 7   EPIEALASATAQSLGFLMESVVLHSHRAPQALIVAVRKGDGSDVNLDDCASFSQAFGEAL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +   ++ G Y LE++SPG+   + +  DF  + G  V      + G + +  G ++G   
Sbjct: 67  ETGELLTGAYVLEITSPGLGDVLQQDRDFRSFRGFPVCVRQRDAKGGEIQREGTLLGRDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L    R ++        I    +L  RL
Sbjct: 127 DAVELNLRGRIQR--------IPRSDVLEVRL 150


>gi|320449996|ref|YP_004202092.1| 15 kDa protein [Thermus scotoductus SA-01]
 gi|320150165|gb|ADW21543.1| 15 kDa protein [Thermus scotoductus SA-01]
          Length = 141

 Score = 97.4 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 8/130 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +E +      + + E    +L     +D+  + + D E  S+AI  + D E
Sbjct: 2   DLWRLVEEAVEPLDLEV--LEVKEAPGEVLVRLERKDERPIRVADLERASRAIEAVFDQE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G YRL V SPG  RP+  +  F R+ G      +       +   G+I+       
Sbjct: 60  DPIPGSYRLLVESPGPKRPLFTRRHFERFQG------LKAKVPGPEGFTGRILRVEGDEV 113

Query: 144 FLEKEKRGEK 153
             +  +  ++
Sbjct: 114 VFQVGQEEKR 123


>gi|259645270|sp|A1WLI5|RIMP_VEREI RecName: Full=Ribosome maturation factor rimP
          Length = 245

 Score = 97.1 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 83/247 (33%), Gaps = 84/247 (34%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-------------RDDGNMTLR---- 67
           +  +++P++  + +  V+I        LL++ ++               DG + L     
Sbjct: 3   LQQIVEPIVTGLGYALVEIE--RSAGGLLRVTIDLPWPAPNGAAAEPAPDGALALEPAPS 60

Query: 68  -------------------------------------------DCEELSQAISPILDVEN 84
                                                      DCE++++ +   L+V+ 
Sbjct: 61  GAGTLDTAPDGATALETVPSGATALETAPNGAVSTPAQSVTLEDCEKVTRQLQFALEVDG 120

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---------KQKLIGKI 135
           +   + RLEV+SPGIDRP+  + D LR+ G V+   +    G          ++K  G +
Sbjct: 121 V--QYQRLEVASPGIDRPLRGEQDLLRFAGSVIDITLKAPIGGAAAGKVGATRKKFRGTL 178

Query: 136 MGTSETGFFL-----------EKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
             T+  G+ +           ++  +         +  S D +   RL    +    +  
Sbjct: 179 ERTASGGWQIVWSDAPPPKPGQRVGKKRLPAPLQALGFSLDEVRDMRLAPIVDFKGRTGK 238

Query: 185 NYGSYAG 191
              + AG
Sbjct: 239 AGAAPAG 245


>gi|320334651|ref|YP_004171362.1| ribosome maturation factor rimP [Deinococcus maricopensis DSM
           21211]
 gi|319755940|gb|ADV67697.1| Ribosome maturation factor rimP [Deinococcus maricopensis DSM
           21211]
          Length = 147

 Score = 97.1 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 7/122 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDV 82
           +  +    +  + +  +++ L    +   L + ++R D+  +T+ D E  S+ +   LD 
Sbjct: 4   LEQLATEALSPLGYEVLEVHLQNPGRRPTLLVRIDRLDEQPVTVDDLETASKLLGLELDR 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I+G YRLE+ SPG  RP+ R   F R  G           G+       I+      
Sbjct: 64  TDPIKGEYRLELESPGSKRPLRRTRHFERMVGLKARVR-----GEGHSFTAPILKVEGDL 118

Query: 143 FF 144
             
Sbjct: 119 VT 120


>gi|113954072|ref|YP_731567.1| hypothetical protein sync_2370 [Synechococcus sp. CC9311]
 gi|123327605|sp|Q0I7K5|RIMP_SYNS3 RecName: Full=Ribosome maturation factor rimP
 gi|113881423|gb|ABI46381.1| DUF150 [Synechococcus sp. CC9311]
          Length = 157

 Score = 96.7 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN-MTLRDCEELSQAISP 78
           L  D+  +      +  F    + +L   + + +QI + R  G+ +TL DC   S  +  
Sbjct: 7   LLPDLKDLASATAVDHGFELADLQVLAHMQPMTVQIQIRRSSGDDVTLDDCAAFSAPMGE 66

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+   ++   Y LE+SSPGI   +    DF  +  + V        G +QK  G ++  
Sbjct: 67  ALENSAVLNEAYVLEISSPGIGDHLQSDRDFQTFRRYPVDVIHRDPDGAEQKHSGTLLER 126

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +E    +    R ++        I  DS+LS  L
Sbjct: 127 TENHLKISIHGRIKQ--------IPRDSILSVEL 152


>gi|309811524|ref|ZP_07705306.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
 gi|308434575|gb|EFP58425.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
          Length = 183

 Score = 96.7 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 19/168 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDD----------GNMTLRDCE 70
              I   I P +E +      ++++   K  L+++ V+RD             +TL +  
Sbjct: 5   EQTIIDTILPKLEPLGLLVEDVTVVPAGKRRLVRVLVDRDVALETAVEESIEPVTLDEVT 64

Query: 71  ELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + ++ I   L+  +++ E  Y LEVSSPG DRP+     F R  G +V   +     D+ 
Sbjct: 65  DATRVIDAELEASDVMGEQPYVLEVSSPGTDRPLTLPRHFARNVGRLVTVTL----DDES 120

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIA---ISFDSLLSARLIV 174
           K+ G+I         +  E+ G+K    +      +++ S+  A++ V
Sbjct: 121 KVAGRITRADAQTVEVTPEQGGKKAGAAVDAEPARLNYTSITGAKVQV 168


>gi|642363|emb|CAA88035.1| 15 kD protein [Thermus thermophilus]
          Length = 156

 Score = 96.3 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
           G   +  D+  +++  +  +    +++     +  LL     +D+  +T+ D EE S+ I
Sbjct: 11  GGGEVTVDLWQLVEEAVSPLGLDVLEVHF--ARGELLVRLERKDERPITVADLEEASRHI 68

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              LD E+ I G YRL V SPG  R +  +  F R+ G      +       +   G+I+
Sbjct: 69  EAALDREDPIPGSYRLLVESPGPKR-LFTRRHFERFQG------LKAKVPGPEGFTGRIL 121

Query: 137 GTSETGFFLEKEKRGEK 153
                    +      +
Sbjct: 122 RVEGEEVVFQVGDEERR 138


>gi|87301302|ref|ZP_01084143.1| hypothetical protein WH5701_15491 [Synechococcus sp. WH 5701]
 gi|87284270|gb|EAQ76223.1| hypothetical protein WH5701_15491 [Synechococcus sp. WH 5701]
          Length = 156

 Score = 96.3 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L   +  ++ P+ E        + +   +  L L I +   DG ++ L +C   S  +  
Sbjct: 5   LIPHLERLVTPLAEASGLALQGVEIQAHRLPLTLVIQIRHADGRDINLDECAAFSGVLGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +++   ++   Y LEVSSPGI   ++   DF  + G  VA       G +    G ++  
Sbjct: 65  VVEASELMTQAYVLEVSSPGIGEELLDDRDFHSFRGFPVAVRFRDGKGLETTREGLLLER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            E    L    R  +        I    ++S RL+
Sbjct: 125 DEEHLQLNLHGRISR--------IPRPDVISVRLV 151


>gi|240172758|ref|ZP_04751417.1| hypothetical protein MkanA1_25812 [Mycobacterium kansasii ATCC
           12478]
          Length = 177

 Score = 96.3 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++        +    + +        + +  + D   + L     LS++ S +LD
Sbjct: 9   TQVIELLGGAFACAGYEIEDVVIDTRAHPPRITVVADGDT-ALDLDTIAALSRSASALLD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I   Y LEVSSPG++RP+  +  F R  G  +   +     D  +L G++   +  
Sbjct: 68  GLDAIRDKYVLEVSSPGVERPLTSEKHFRRARGRKIELTL----ADGSRLTGRVGELTGD 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              L       +  N     I    +L A
Sbjct: 124 TLALVI----RQGRNWAVRQIPLAQVLKA 148


>gi|259016314|sp|Q3AZB4|RIMP_SYNS9 RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 95.9 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDG-NMTLRDCEELSQAISP 78
           L  ++  + Q V     F    I LL   N + LQ+ +    G ++ L DC   S  +  
Sbjct: 5   LLPELEQLTQRVAGLQGFELCGIQLLTHMNPITLQVQIRHTSGSDVNLDDCAGFSGVLGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+    +   Y LE+SSPGI   +    DF  + G  V          + +L G +   
Sbjct: 65  ALEESQQLVEAYVLEISSPGIGEQLSCDRDFQTFRGFPVDVTHRDQGNVEHRLEGLLHER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +     +    R +        +I  D ++  RL
Sbjct: 125 NTDSLQINIRGRIK--------SIPRDQVIEVRL 150


>gi|228473622|ref|ZP_04058374.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228274994|gb|EEK13804.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 154

 Score = 95.9 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 16/160 (10%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  +I   +EE       I     K+ L+++ V+ D G + + DC  LS+AI  
Sbjct: 1   MNLKEKVKELIDKHLEENP-SLFLIEYSIGKDNLIKVIVDGDHG-VNIDDCVALSRAIEH 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E   E  + LEVSS GI  P+ ++  + +  G  V  +   ++      IG I   
Sbjct: 59  NLDRE---EEDFSLEVSSSGIFAPLTQERQYTKNIGREVEVKTATATH-----IGVIQEV 110

Query: 139 SETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARL 172
           S+    L+   R  K   + +I       +  + +  A L
Sbjct: 111 SDGKVTLQVTSRQPKPQGKGKITVTEQFSLPIEEIKEATL 150


>gi|167751251|ref|ZP_02423378.1| hypothetical protein EUBSIR_02237 [Eubacterium siraeum DSM 15702]
 gi|167655758|gb|EDR99887.1| hypothetical protein EUBSIR_02237 [Eubacterium siraeum DSM 15702]
          Length = 163

 Score = 95.5 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 3/143 (2%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
              + P+IE   +    +   +E     L++  ++ DG +   +CEE+++ ++  +D  +
Sbjct: 20  EQKVLPIIERYGYELWDVIFEKEGAMWYLKVLFDKADGGIDDVECEEITEPLNKAVDTLS 79

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET--G 142
            I+     EV SPG+DR + +   F++  G  +   +   +G      G +    E    
Sbjct: 80  CIDLVDVFEVGSPGLDRQLRKPFHFVKMKGEKIKVTVRDENGKTAYYSGVLGDYDENSGE 139

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
           F ++ +    K        I+ D
Sbjct: 140 FTVQTDDGEMKFNAAKCRRIALD 162


>gi|239928613|ref|ZP_04685566.1| hypothetical protein SghaA1_10340 [Streptomyces ghanaensis ATCC
           14672]
 gi|291436938|ref|ZP_06576328.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339833|gb|EFE66789.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 173

 Score = 95.5 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 7/154 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +  +  +++P++    F   +I++       +   V   D    L    ++S+A+S  LD
Sbjct: 6   SERLRELLEPLVSSQGFDLEEIAVDSVGRRRVLRVVVDSDTGADLDRIADVSRALSAKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + +G Y LEV +PG +R +     ++R  G +V  ++     +  +L+ +I+   +
Sbjct: 66  ETDAMGQGEYTLEVGTPGAERLLTEHRHYVRATGRLVRFQL----AEGGELVARILEVGD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  LE    G K        ++FD +  AR+ V
Sbjct: 122 DGLDLEV--PGVKGRKATARRLAFDDITRARVQV 153


>gi|254431118|ref|ZP_05044821.1| hypothetical protein CPCC7001_1009 [Cyanobium sp. PCC 7001]
 gi|197625571|gb|EDY38130.1| hypothetical protein CPCC7001_1009 [Cyanobium sp. PCC 7001]
          Length = 158

 Score = 95.5 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 3/145 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  ++ ++   V  E+ F   Q++LL  +  + LQ+ V+R DG +++L +C  LS  +  
Sbjct: 5   LIPELETLAGKVCAELGFELRQVNLLTHRIPMTLQVLVQRGDGRDISLDECAALSAPLGE 64

Query: 79  ILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + D   ++ E  Y LE+SSPG+   +  + DF  + G  VA      +G + +  G ++ 
Sbjct: 65  VFDAAGVLGEEAYVLEISSPGVSDELQDERDFRSFRGFPVAVRFTDRNGAEARCEGLLLE 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAI 162
            + +   +    R ++      I +
Sbjct: 125 RTASELQINMRGRTKRIPRASVIQV 149


>gi|269219600|ref|ZP_06163454.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210842|gb|EEZ77182.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 160

 Score = 95.1 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDG--NMTLRDCEELSQAIS 77
           +   IS+ +  V+         + +    KNL++++ V+   G   +      E+S+ IS
Sbjct: 1   MTESISTALDEVVASRGLYLEAVKIGRGGKNLVVKVVVDLPSGPGGVDSDRLTEVSRDIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++++G Y LEVS+PG +R +     F R  G +V    V    D + ++G+++ 
Sbjct: 61  QRLDDVDLVQGAYTLEVSTPGAERSLREPRHFSRAQGRLVELRTV----DGKSVVGRLVS 116

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            S     ++ E          + ++    ++S R+
Sbjct: 117 LSGDALNVQVEG--------SRRSVPMAEVVSGRV 143


>gi|213026073|ref|ZP_03340520.1| hypothetical protein Salmonelentericaenterica_28018 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 59

 Score = 95.1 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           +S  +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K
Sbjct: 1   MSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRK 59


>gi|329936657|ref|ZP_08286364.1| hypothetical protein SGM_1856 [Streptomyces griseoaurantiacus M045]
 gi|329303887|gb|EGG47770.1| hypothetical protein SGM_1856 [Streptomyces griseoaurantiacus M045]
          Length = 179

 Score = 95.1 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 7/154 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
           +  +  +++P++        +I +       +   V   D    L    ++S+A+S  LD
Sbjct: 6   SERLRELLEPLVTSQGLDLEEIDVASVGRRRVLRVVVDSDTGADLDRVADVSRALSAKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +  G Y LEV +PG +R +     ++R    +V  ++     +  +L+ +I+G  E
Sbjct: 66  ETDAMGAGEYTLEVGTPGAERALTEHRHYVRALDRLVRFQLR----EGGELVARILGVDE 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  LE    G K        ++F  +  AR+ V
Sbjct: 122 EGLDLEV--PGVKGRRPTTRRLAFPDVDKARVQV 153


>gi|301167103|emb|CBW26682.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 172

 Score = 94.4 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 68/167 (40%), Gaps = 22/167 (13%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMT-LRDCEELSQAIS 77
            G+      +   + EE+      +  L+  +  L++F+   +     L +C +L +A++
Sbjct: 8   TGVEKKFYELCSRLCEELGLEIYDLDYLKGSH-TLRVFIMNPETKTAVLEECSKLDRALT 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL------------SS 125
           P ++ E  +     LEVSSPG+ R + +   F       +   I              S 
Sbjct: 67  PYIEEEEWMPSELTLEVSSPGMFRHLSKIEHFEMSLEEDIQFTIRARLTQDLFPGIPKSL 126

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             ++K++GK++  +E    +          ++ ++ + ++ +  A L
Sbjct: 127 QGERKILGKLLKVTEETITV--------LSHDYELTLKYEDIKKANL 165


>gi|183981904|ref|YP_001850195.1| hypothetical protein MMAR_1891 [Mycobacterium marinum M]
 gi|226696166|sp|B2HKR9|RIMP_MYCMM RecName: Full=Ribosome maturation factor rimP
 gi|183175230|gb|ACC40340.1| conserved hypothetical protein [Mycobacterium marinum M]
          Length = 177

 Score = 94.4 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++        +    + +    +   + +  + D   + L     LS++ S +LD
Sbjct: 9   TQVIELLGGEFARAGYEIEDVVIDHRARPPRITVVADGDT-TLDLDTIAVLSRSASSLLD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I   Y LEVSSPGIDRP+  +  F R  G  V   +     D  +L G+I      
Sbjct: 68  SLDNIGDSYVLEVSSPGIDRPLTSEKHFRRARGRKVELTL----ADGSQLTGRIGALQSG 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              L      E  + E    I    +  A
Sbjct: 124 SLDLVVRAGREWKVRE----IPLAEVEKA 148


>gi|325676663|ref|ZP_08156338.1| hypothetical protein HMPREF0724_14121 [Rhodococcus equi ATCC 33707]
 gi|325552518|gb|EGD22205.1| hypothetical protein HMPREF0724_14121 [Rhodococcus equi ATCC 33707]
          Length = 189

 Score = 94.4 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 14/172 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++   I    +    +++ L  ++  +++ V+ D G + L +   LS  IS + D
Sbjct: 7   ERVVELLADPIGREGYDLEDVTITLAGRHSSVRVMVDSDSG-LELDEVARLSHVISDVFD 65

Query: 82  VE-NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              +  E  Y LEV+SPGIDRP+     + R  G  V  E+       + + G++   ++
Sbjct: 66  AASDFGESPYTLEVTSPGIDRPLTEGRHWRRAQGRKVLVELAE-----ESVTGRVGRLTD 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
            G  L  + +G   +  +++A     +  A  +V  E  R          G+
Sbjct: 121 GGVDLVVKAKGGPVVRRVELA----DVKKA--VVQVEFSRPDAKELELAGGI 166


>gi|54026040|ref|YP_120282.1| hypothetical protein nfa40690 [Nocardia farcinica IFM 10152]
 gi|81373776|sp|Q5YSC3|RIMP_NOCFA RecName: Full=Ribosome maturation factor rimP
 gi|54017548|dbj|BAD58918.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 217

 Score = 94.4 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 16/163 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-----NLLLQIFVERDDGNMTLRDCEELS 73
           M     +S ++  ++E   F    + +            + + V+  DG   L    ELS
Sbjct: 3   MPTEERVSQLVAGLVERRGFDLEGVEITRAGSRADAQPRVTVVVDS-DGAADLDAVAELS 61

Query: 74  QAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-----GD 127
             +S +LD  +I     Y LEV++PG+DRP+     + R  G  V   +   +     G 
Sbjct: 62  SEMSVVLDDTDIFGDSPYLLEVTTPGVDRPLTAPRHWRRAQGRKVRITLRPGAEPPDPGG 121

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
                 ++         L    +     N  ++ +    +  A
Sbjct: 122 SAGFEARVGVLDGEQIALVLGGK----RNPHRVRVPLADIERA 160


>gi|254482605|ref|ZP_05095844.1| conserved hypothetical protein [marine gamma proteobacterium
           HTCC2148]
 gi|214037296|gb|EEB77964.1| conserved hypothetical protein [marine gamma proteobacterium
           HTCC2148]
          Length = 90

 Score = 94.0 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y LEVSSPG+DR + + + +  + G ++   +  +   ++K  G + G 
Sbjct: 1   MLDVEDPITGEYTLEVSSPGMDRLLFQLTQYPAYVGEIIELRLRSAFEGRRKFKGVLKGI 60

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 ++ +          +  +   ++  AR+
Sbjct: 61  EGEDVVIQVDNH--------EYLLPHSAIEKARV 86


>gi|298345266|ref|YP_003717953.1| hypothetical protein HMPREF0573_10140 [Mobiluncus curtisii ATCC
           43063]
 gi|315655686|ref|ZP_07908584.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|298235327|gb|ADI66459.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
 gi|315489750|gb|EFU79377.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
          Length = 197

 Score = 94.0 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMT 65
           + ++ +P    D  +   I  V+ PV+E       +I++   K+  ++ I ++  DG   
Sbjct: 25  ITTEAQPHTSTDPSVEA-IIQVVNPVVEAAGLYLEKIAVTGPKHQRVVAISLDLPDGVDN 83

Query: 66  L--RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           L     E+ S+AI   LD  + + G Y LE+S+ G +  +       R  G  V      
Sbjct: 84  LGSAQLEDASRAIGAALDAADPLSGAYTLEISTLGAEHELTNLRLARRALGKDVEVRT-- 141

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                Q   G +   +ETG  +  +               F+ + S R ++
Sbjct: 142 ---GGQVRAGILTEVTETGLSVNDDGDVTVY--------PFEDIESVRTVI 181


>gi|226306116|ref|YP_002766076.1| hypothetical protein RER_26290 [Rhodococcus erythropolis PR4]
 gi|259586185|sp|C0ZYA2|RIMP_RHOE4 RecName: Full=Ribosome maturation factor rimP
 gi|226185233|dbj|BAH33337.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 206

 Score = 93.6 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 12/150 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +I  ++    +    + +    K+  ++I V+ D G + L    E+S+ +S + D
Sbjct: 7   ERVIELISELVHAQGYDVEDVVVTSAGKHSAVRIMVDSDAG-IELDAAAEISRLVSELFD 65

Query: 82  V-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             E I E  Y LEV+SPGIDRP+  +  + R  G     ++       + ++G+I   ++
Sbjct: 66  SLEEIGETPYTLEVTSPGIDRPLTLERHWRRARGRKARIDLA-----GETVVGRIGTLND 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               +    RG   + E    I+   +  A
Sbjct: 121 DSVAVVIGGRGGLTVRE----IALGDVQKA 146


>gi|229491457|ref|ZP_04385281.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229321742|gb|EEN87539.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 206

 Score = 93.6 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 12/150 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +I  ++    +    + +    K+  ++I V+ D G + L    E+S+ +S + D
Sbjct: 7   ERVIELISELVHAQGYDVEDVVVTSAGKHSAVRIMVDSDAG-IELDAAAEISRLVSELFD 65

Query: 82  V-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             E I E  Y LEV+SPGIDRP+     + R  G     ++       + ++G+I   ++
Sbjct: 66  TLEEIGETPYTLEVTSPGIDRPLTLDRHWRRARGRKARIDLA-----GETVVGRIGTLND 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               +    RG   + E    I+   +  A
Sbjct: 121 DSVAVVIGGRGGLTVRE----IALGDVQKA 146


>gi|297626629|ref|YP_003688392.1| hypothetical protein PFREUD_14670 [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922394|emb|CBL56966.1| Hypothetical protein PFREUD_14670 [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 157

 Score = 93.2 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD--DG-NMTLRDCEELSQAIS 77
              +  ++ P++ E      ++ ++   K+ +L+I ++ D  +G    L    + ++AIS
Sbjct: 3   ESTLIDLLDPIVAEHGLEIDELKIVRAGKHSVLRISLDGDGSEGHGPDLDQIADATRAIS 62

Query: 78  PILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             LD  E      Y LEVSS G+  P+ R + + R    +V           +K  G+I 
Sbjct: 63  HALDEAEAPSNSPYTLEVSSRGVSAPLTRPAHWRRNATRLVEVT---PLEG-EKYTGRIT 118

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              E G  LE + +           + F  +  A
Sbjct: 119 SADEDGAELEIDGQPR--------HVDFGQVRRA 144


>gi|295395323|ref|ZP_06805526.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971826|gb|EFG47698.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 153

 Score = 93.2 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 63/158 (39%), Gaps = 17/158 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERD---DGNMTLRDCEELSQAIS 77
           A  ++ +I+  + +       +          + + ++ D      ++L    + ++ +S
Sbjct: 5   AQQVTDLIRTPLSQAGLIVEDVKAHAAGQYRKVTVVIDLDTDTSDPVSLDTIAQATKIVS 64

Query: 78  PILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            ++D VE   +  Y LEV+SPG  R +  K  FLR  G  +               G+++
Sbjct: 65  ELIDDVELFNDKPYDLEVTSPGATRELTAKRHFLRNRGRNLDVRTNGP-----TYTGELV 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             ++ G  L   K+       +   I F  +  A++++
Sbjct: 120 DVTDKGITLMDTKK-------VDYVIPFSDITKAKVVL 150


>gi|110639789|ref|YP_679999.1| hypothetical protein CHU_3420 [Cytophaga hutchinsonii ATCC 33406]
 gi|122966504|sp|Q11PK7|RIMP_CYTH3 RecName: Full=Ribosome maturation factor rimP
 gi|110282470|gb|ABG60656.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 167

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 21/170 (12%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLE--EKNLLLQIFVERDDGNMTLRDCEELSQA 75
           ++ +   +S ++Q   E      V I+      +  +L + +++D G + + +C E S+A
Sbjct: 5   ELEIKTYVSDLLQERAE---LFLVDIAFSGTHSRRKIL-VILDKDSG-ILIDECGEFSRA 59

Query: 76  ISPILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +  +++  N+     Y LEVSSPG+DRP++    + R  G+     +     D  +    
Sbjct: 60  LGNLIEENNLFGDNAYVLEVSSPGMDRPLLVSRQYKRRIGN----TLSFLLNDGTQFDAV 115

Query: 135 IMGTSETGFFL----EKEKRGEKDMNELQIAIS-----FDSLLSARLIVT 175
           +   SE G  +    +K K+  K    + +AI      F+ +    LIV+
Sbjct: 116 LESVSEEGVVVMPAPQKVKKSNKKEAVVDVAIEPRKLRFEEIKKCNLIVS 165


>gi|269956008|ref|YP_003325797.1| hypothetical protein Xcel_1208 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304689|gb|ACZ30239.1| protein of unknown function DUF150 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 192

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 4/138 (2%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD---GNMTLRDCEEL 72
           G    A  +  V+ P ++        +S        ++++ V+  +   G++     + +
Sbjct: 12  GGSATAEAVRRVVAPAVDAEGLFLESVSATRAGARSVVRVTVDLPEDAVGSLGSDALDAV 71

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+AIS  LD ++++ G Y LEVS+PG  RP+     F R    +V   +V     + +L 
Sbjct: 72  SRAISAALDADDVVRGVYVLEVSTPGTSRPLTELRHFKRARTRLVTLSLVDGGEAEGRLQ 131

Query: 133 GKIMGTSETGFFLEKEKR 150
             + GT      LE   R
Sbjct: 132 DVVAGTDGDELVLEDGGR 149


>gi|193214184|ref|YP_001995383.1| hypothetical protein Ctha_0465 [Chloroherpeton thalassium ATCC
           35110]
 gi|259585751|sp|B3QUN0|RIMP_CHLT3 RecName: Full=Ribosome maturation factor rimP
 gi|193087661|gb|ACF12936.1| protein of unknown function DUF150 [Chloroherpeton thalassium ATCC
           35110]
          Length = 182

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 35  EMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVEN----IIEGH 89
           E     V I +   K + ++++F + D G +++ +C+ LS+ IS  LD       ++  H
Sbjct: 29  EHEVFLVDIEVHSNKTIDIIEVFADTDSG-ISVENCKFLSKHISAELDASEEMQALLPRH 87

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET---GFFLE 146
           ++L VSSPG+ RP+     + +  G ++      + G+ + + G+ +   E       L+
Sbjct: 88  FKLVVSSPGLSRPLTMNRQYKKNIGRLMQVTYQNADGEIKTIDGRFISLEEEAEASITLD 147

Query: 147 KEKRGE-----KDMNELQIAISFDSLLSA 170
             K  +     K      + I F  +  A
Sbjct: 148 ITKIQKSKPNAKPKPPELVTIPFSQIQKA 176


>gi|118617679|ref|YP_906011.1| hypothetical protein MUL_2119 [Mycobacterium ulcerans Agy99]
 gi|166987594|sp|A0PQC1|RIMP_MYCUA RecName: Full=Ribosome maturation factor rimP
 gi|118569789|gb|ABL04540.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 177

 Score = 92.4 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++        +    + +    +   + +  + D   + L     LS++ S +LD
Sbjct: 9   TQVIELLGGEFARAGYEIEDVVIDHRARPPRITVVADGDT-TLDLDTIAVLSRSASSLLD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I   Y LEVSSPGIDRP+  +  F R  G  V   +     D  +L G+I      
Sbjct: 68  SLDNIGDSYVLEVSSPGIDRPLTSEKHFRRARGPKVELTL----ADGSQLTGRIGALQSG 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              L      E  + E    I    +  A
Sbjct: 124 SLDLVVRAGREWKVRE----IPLAEVEKA 148


>gi|15806797|ref|NP_295519.1| hypothetical protein DR_1796 [Deinococcus radiodurans R1]
 gi|34223164|sp|Q9RTG8|RIMP_DEIRA RecName: Full=Ribosome maturation factor rimP
 gi|6459574|gb|AAF11352.1|AE002021_1 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 158

 Score = 92.4 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 3/128 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISPILDV 82
           +  +    +  + F  ++++   E ++L++ + ++R D+  +T+ D    S+A     D 
Sbjct: 11  LFDLADGAVRPLGFEVLEVTQQREGRDLIVLVRIDRLDEQPVTMDDLTAASRAAEAEFDR 70

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + IE  YRLE  SPG  RP++R   F R  G        L    +      I       
Sbjct: 71  VDPIEEEYRLEFESPGGKRPLLRARHFERMIGLKAKVR-SLPGRGEHNFTAPIKAVEGDT 129

Query: 143 FFLEKEKR 150
              E    
Sbjct: 130 VTFEHGGE 137


>gi|269795642|ref|YP_003315097.1| hypothetical protein Sked_23480 [Sanguibacter keddieii DSM 10542]
 gi|269097827|gb|ACZ22263.1| uncharacterized conserved protein [Sanguibacter keddieii DSM 10542]
          Length = 181

 Score = 92.0 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 17/166 (10%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD---GNMTLRDCEELSQAI 76
           +A  ++  ++P +E        + +       ++++ ++  +   G + L    E+S+ I
Sbjct: 6   IAEQVADAVRPGVESAGLVLEDVQVAPAGARTVVRVVLDLTEDQTGALGLDQVAEVSRVI 65

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD    + G + LEV+SPG  RP+     F R    +VA  +V  +        ++ 
Sbjct: 66  SDTLDTLPALPGKFTLEVTSPGTSRPLTELRHFKRARTRLVAVTLVEGAP----FTERLT 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
              +     E         +     + F ++ S ++ V  EL RA+
Sbjct: 122 SVEDEVLVFE-------GADGAPHEVPFAAVSSGQVEV--ELKRAA 158


>gi|88807315|ref|ZP_01122827.1| hypothetical protein WH7805_12228 [Synechococcus sp. WH 7805]
 gi|88788529|gb|EAR19684.1| hypothetical protein WH7805_12228 [Synechococcus sp. WH 7805]
          Length = 155

 Score = 92.0 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 4/147 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISP 78
           L  DI+SV         F    I +L   + + +Q+ + R DG +++L DC   S+ +  
Sbjct: 5   LLPDITSVAAATAAAQGFELAGIQILTHLQPMTVQVQIRRSDGSDVSLDDCAGFSRPMGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ-KLIGKIMG 137
            L+ + ++   Y LE+SSPGI   +    DF  +  + V   +   +  ++ +  G ++ 
Sbjct: 65  ALESQALLTEAYVLEISSPGIGDQLQSDRDFQTFRSYPVEV-LYRDNEGRELRQQGSLLE 123

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISF 164
                  +    R ++      I++  
Sbjct: 124 RDNDHVHVNVRGRIKRISRPSVISVQL 150


>gi|318042327|ref|ZP_07974283.1| hypothetical protein SCB01_11489 [Synechococcus sp. CB0101]
          Length = 157

 Score = 91.7 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGN-MTLRDCEELSQAISP 78
           L  D+  +   V  +  F+   + LL  +  + L + +   DG  ++L +C   S  +  
Sbjct: 5   LIPDLERLASQVAADAGFQVCGVQLLTHRIPMTLLVQLRLADGGDVSLDNCASFSGVLGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ-KLIGKIMG 137
            L+   +IE  Y LE+SSPGI   +    DF  + G  V      S    + +  G ++ 
Sbjct: 65  ALEAAALIEDAYVLEISSPGIAETLNDDRDFRSFRGFPVCVRYRDSKTGVEAEREGLLLE 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            ++    +    R         + +    +++ RL
Sbjct: 125 RTDDSVQINVRGR--------TVRLPRADVIAVRL 151


>gi|257457667|ref|ZP_05622834.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
 gi|257445053|gb|EEV20129.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
          Length = 186

 Score = 91.7 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 70/148 (47%), Gaps = 22/148 (14%)

Query: 30  QPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI----SPILDVEN 84
           + ++  + ++ V + ++ +K+  L++  +   +G + + DC ++ +A+      +L+ ++
Sbjct: 53  EQLVTGLGYKLVDLQIVHQKSAWLVKAVIYSKNG-VGIDDCSKVHRALLSRAEVLLNSQD 111

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           I     ++EVSSPG++R +   ++F  + G  +   + +S  D   L G+++    TG  
Sbjct: 112 I-----QMEVSSPGLNRVIKNAAEFQAFIGENIKV-LEVSCPD--WLEGELLAADSTGIR 163

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARL 172
           L                I +  +  A+L
Sbjct: 164 LNISGEQRD--------IRYADIKKAKL 183


>gi|78184172|ref|YP_376607.1| hypothetical protein Syncc9902_0595 [Synechococcus sp. CC9902]
 gi|78168466|gb|ABB25563.1| conserved hypothetical protein [Synechococcus sp. CC9902]
          Length = 166

 Score = 91.7 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 37  SFRSVQISLLEEKNLL-LQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
            F    I LL   N + LQ+ +    G ++ L DC   S  +   L+    +   Y LE+
Sbjct: 32  GFELCGIQLLTHMNPITLQVQIRHTSGSDVNLDDCAGFSGVLGEALEESQQLVEAYVLEI 91

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPGI   +    DF  + G  V          + +L G +   +     +    R +  
Sbjct: 92  SSPGIGEQLSCDRDFQTFRGFPVDVTHRDQGNVEHRLEGLLHERNTDSLQINIRGRIK-- 149

Query: 155 MNELQIAISFDSLLSARL 172
                 +I  D ++  RL
Sbjct: 150 ------SIPRDQVIEVRL 161


>gi|262202084|ref|YP_003273292.1| hypothetical protein Gbro_2150 [Gordonia bronchialis DSM 43247]
 gi|262085431|gb|ACY21399.1| protein of unknown function DUF150 [Gordonia bronchialis DSM 43247]
          Length = 179

 Score = 91.7 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 11/151 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
           + +++ +++ V+ +  F    + +          + V+R DG   L    ELS  I  +L
Sbjct: 5   SPELNDLVEKVVTDRGFDLEDVVVRRRDGRDEFSVVVDR-DGGSDLDVLAELSTEIGEVL 63

Query: 81  D-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D V  + +  Y LEV+SPGIDRP+     + R  G  V  E          ++G++   S
Sbjct: 64  DAVPALADAAYTLEVTSPGIDRPLTAPRHWRRALGRRVRIE----RDGSDAVVGRVGQVS 119

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
                +    +G   +      + FDS+  A
Sbjct: 120 GDDVAIVVNHKGRLAVE----TVGFDSVTRA 146


>gi|226355943|ref|YP_002785683.1| hypothetical protein Deide_10390 [Deinococcus deserti VCD115]
 gi|259585746|sp|C1CUR2|RIMP_DEIDV RecName: Full=Ribosome maturation factor rimP
 gi|226317933|gb|ACO45929.1| conserved hypothetical protein [Deinococcus deserti VCD115]
          Length = 154

 Score = 91.3 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 7/128 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVER-DDGNMTLRDCEELSQAISPILDV 82
           +  +    +E + F  +++ +  +    ++ + V+R D+  +T+ D  + S+A     D 
Sbjct: 11  LQQIAHAAVEPLGFEVLEVQVQSQGGEKIVLVRVDRLDEQPVTMEDLTKASRAAEAEFDR 70

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + + G YRLE  SPG  RP+ R   F R  G           G+       I   S   
Sbjct: 71  LDPVAGEYRLEFESPGSKRPLTRARHFERMLGLKARVR-----GEGHAFTAPIKAVSGDQ 125

Query: 143 FFLEKEKR 150
              +   +
Sbjct: 126 VTFDVSGQ 133


>gi|325286755|ref|YP_004262545.1| Ribosome maturation factor rimP [Cellulophaga lytica DSM 7489]
 gi|324322209|gb|ADY29674.1| Ribosome maturation factor rimP [Cellulophaga lytica DSM 7489]
          Length = 154

 Score = 91.3 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 74/158 (46%), Gaps = 15/158 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             ++S+++  ++E       I      +  + I ++ D+G +TL+DC  +S+AI   LD 
Sbjct: 4   EQVTSLLEGALKETP-SLFLIDFTITPDFKINIVLDGDNG-VTLKDCVAVSRAIDHNLDR 61

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E   E  + +EV+S G   P+V    + +  G  +  + +    + +   G++   +E  
Sbjct: 62  E---EQDFSVEVASAGASSPLVLPRQYAKNIGRKLEVKTI----EGRNFEGQLTAATEET 114

Query: 143 FFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
             LE + R +K + + ++       I F  +  A++++
Sbjct: 115 ITLEWKAREQKPVGKGKVTVQKKEEILFSDIKEAKVVL 152


>gi|260910868|ref|ZP_05917512.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260635019|gb|EEX53065.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 167

 Score = 91.3 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 58/138 (42%), Gaps = 14/138 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  +++  + +  +  V +    +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 20  VKQLVEQWLADKEYFLVDVETSPDSRIVVE--IDHADG-VWIEDCVELSRFIEEHLNRDE 76

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         D +K  G +       
Sbjct: 77  ED-----YELEVGSAGLGQPFKVPQQYVNFIGKEVEV----LDKDGKKYKGTLKSVDGND 127

Query: 143 FFLEKEKRGEKDMNELQI 160
           F +   ++ + +  +  +
Sbjct: 128 FVVTVNEKVKVEGKKRPV 145


>gi|159904154|ref|YP_001551498.1| hypothetical protein P9211_16131 [Prochlorococcus marinus str. MIT
           9211]
 gi|159889330|gb|ABX09544.1| DUF150 [Prochlorococcus marinus str. MIT 9211]
          Length = 171

 Score = 91.3 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 2/146 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVER-DDGNMTLRDCEELSQAISP 78
           +   +  +      +     V++        + +Q+ +++    +++L DC + S+ IS 
Sbjct: 21  IVTSLKILASNTAADKGLEVVELKFNPHSKPITIQVQIQKKPKKDVSLDDCAQFSELISE 80

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +++  +I   Y LE+SSPG+   +    DF  + G  +      +   K    G +   
Sbjct: 81  TIELSKLINEPYLLEISSPGLGDLLQTDKDFKTFKGFPIEVLFKNNENTKLTKSGLLHER 140

Query: 139 SETGFFLEKEKRGEKDMNELQIAISF 164
           S+    +  + R  K   E  I +  
Sbjct: 141 SKEYLLINIKGRISKIPREDVITVQL 166


>gi|332883099|gb|EGK03383.1| hypothetical protein HMPREF9456_02020 [Dysgonomonas mossii DSM
           22836]
          Length = 187

 Score = 91.3 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 10/151 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +   M     I  + +  +E  +   V + +     +++++  + D+G +++ DC  LS+
Sbjct: 29  LVKKMIEKELIRDITEKYLEGTTMFLVDVVVKPGNAIVVEV--DSDEG-VSIDDCIALSR 85

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I   LD E      + LEV S GI  P+     + ++ G+ V           QKL G 
Sbjct: 86  NIESHLDRE---AEDFELEVGSAGITSPLKIPRQYKKYIGNEVEVLTKK----GQKLSGV 138

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
           +    +  F +   K  + D  + ++A+  D
Sbjct: 139 LKSCDDNSFVITVTKMVKPDGGKKKVAVDED 169


>gi|295132450|ref|YP_003583126.1| hypothetical protein ZPR_0573 [Zunongwangia profunda SM-A87]
 gi|294980465|gb|ADF50930.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
          Length = 154

 Score = 90.9 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 79/164 (48%), Gaps = 18/164 (10%)

Query: 19  MGLAGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L  ++  ++Q   EE +    + + +  +    +++ ++ D G +++ DC  +S+ + 
Sbjct: 1   MKLKENVEKLLQQAFEENNSLFLIDLMITSDNQ--IRVIIDGDKG-VSVEDCMYVSRKVE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E   E  + LEV+S G+  P+     + +  G  +  +      + +K  G ++ 
Sbjct: 58  HNLDRE---EEDFSLEVTSAGVSEPLQIPRQYKKNIGRKLQVKT-----ENEKFEGNLID 109

Query: 138 TSETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARLIVT 175
            +E+   L+ + R  K + + ++       +++ +++ A++++T
Sbjct: 110 ATESDIKLQWKAREPKPVGKGKVTVEKEAVLAYSAIVEAKVMIT 153


>gi|116071182|ref|ZP_01468451.1| hypothetical protein BL107_16090 [Synechococcus sp. BL107]
 gi|116066587|gb|EAU72344.1| hypothetical protein BL107_16090 [Synechococcus sp. BL107]
          Length = 166

 Score = 90.9 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 37  SFRSVQISLLEEKNLL-LQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEV 94
            F    I LL   N + LQ+ +   +G+ + L DC   S  +   L+    +   Y LE+
Sbjct: 32  GFELCGIQLLTHLNPITLQVQIRHTNGSDVNLDDCAGFSGVLGEALEESQQLIEAYVLEI 91

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPGI   +    DF  + G  V          +  L G +   +     +    R +  
Sbjct: 92  SSPGIGEQLSCDRDFQTFRGFPVDVTHRDQGNVEHHLEGLLHERNTDSLQINIRGRIK-- 149

Query: 155 MNELQIAISFDSLLSARL 172
                 +I  D ++  RL
Sbjct: 150 ------SIPRDQVIEVRL 161


>gi|320537772|ref|ZP_08037694.1| hypothetical protein HMPREF9554_02448 [Treponema phagedenis F0421]
 gi|320145362|gb|EFW37056.1| hypothetical protein HMPREF9554_02448 [Treponema phagedenis F0421]
          Length = 149

 Score = 90.9 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 30  QPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           + ++  + +R V +S +++K    +Q  V  + G + + DC ++ +A+ P L+   +   
Sbjct: 16  ESLVNGLGYRLVNLSAVKQKAGWQIQAVVYSEKG-VGIDDCSKVHRALLPRLEAL-LNSQ 73

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
              L+VSSPGI+R +    +F  + G  +A      S  ++   G +  T+E    +E +
Sbjct: 74  DVSLQVSSPGINRNIKSTIEFAAFIGEAIAVWSAEISDWRE---GTLADTTEEAITIETK 130

Query: 149 KRGEKDMNELQIAISFDSLLSARL 172
                   E   AIS+  +  A+L
Sbjct: 131 --------EGMAAISYADIKKAKL 146


>gi|332298599|ref|YP_004440521.1| Ribosome maturation factor rimP [Treponema brennaborense DSM 12168]
 gi|332181702|gb|AEE17390.1| Ribosome maturation factor rimP [Treponema brennaborense DSM 12168]
          Length = 169

 Score = 90.9 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 68/155 (43%), Gaps = 18/155 (11%)

Query: 31  PVIEEMSFRSVQISLLEEKNLLLQIF--VERDDGN-----MTLRDCEELSQAISPILDVE 83
           P++  + +  V++ ++ +   ++++   +    G      + + DC ++ +A+ P L+V 
Sbjct: 17  PLVAGLGYVLVELRVIPQHG-VIRVLAVISHPAGENSIALIGINDCAKVHRALLPRLEVV 75

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +      +EV+SPG++R +   ++F  + GH+V       +     + GKI+ +     
Sbjct: 76  -LNSQDIYMEVTSPGMERVIKNAAEFALFTGHLVRVWDSEVTD---WIAGKIVVSDTESV 131

Query: 144 FLEKEKRGEKDMNELQI------AISFDSLLSARL 172
            LE  +       E  I       I +  +  A+L
Sbjct: 132 TLEMIRTELVKGAEPSIGAPESKRIPYGRIAKAKL 166


>gi|134102375|ref|YP_001108036.1| hypothetical protein SACE_5928 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291004240|ref|ZP_06562213.1| hypothetical protein SeryN2_06952 [Saccharopolyspora erythraea NRRL
           2338]
 gi|167016718|sp|A4FM36|RIMP_SACEN RecName: Full=Ribosome maturation factor rimP
 gi|133914998|emb|CAM05111.1| protein of unknown function DUF150 [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 185

 Score = 90.5 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 73/152 (48%), Gaps = 11/152 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  +  V+   +    F   ++ + +  +  L+++ V+ ++G + L +  E+S+A+S +
Sbjct: 9   VAARLEPVVAEAVSAAGFDLEELDVQQAGRRRLVKVVVDAEEG-VGLDEISEISRAVSKV 67

Query: 80  LDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           LD  E+++ G Y LEV+SPG+DRP+ R   + R    +V   +     D   L+ ++   
Sbjct: 68  LDAHEHVLAGSYTLEVTSPGVDRPLTRPRHWRRARYRLVRVRL----ADGSDLVVRVGEA 123

Query: 139 SETGFFLEKEKRGE----KDMNELQIAISFDS 166
            + G  +  +        +D+    + + F  
Sbjct: 124 DDEGVVVLADGEIRTLAYRDVERAVVEVEFQQ 155


>gi|326382938|ref|ZP_08204628.1| ribosome maturation protein RimP [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198528|gb|EGD55712.1| ribosome maturation protein RimP [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 181

 Score = 90.5 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 8/153 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISP 78
            L GDI  V+   + E  +   ++++L       ++I V+R DG  +L    +LS+A+  
Sbjct: 5   ALTGDIGDVLTAPLAEHGYDLEEVAILTPPGRREIRIVVDR-DGGASLDALADLSRALES 63

Query: 79  ILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +LD  +++ E  Y LE+++PGI RP+     + R  G  V  E     G  + +  ++  
Sbjct: 64  VLDDSDLLGESPYDLELTTPGIGRPLTLPRHWRRSQGRKVTAE-YTVDGAARTVEARVGE 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           + +    L    +         + ++   ++ A
Sbjct: 123 SDDDQVTLVLVDKSRIK----TVDVALADIVRA 151


>gi|289643648|ref|ZP_06475761.1| protein of unknown function DUF150 [Frankia symbiont of Datisca
           glomerata]
 gi|289506539|gb|EFD27525.1| protein of unknown function DUF150 [Frankia symbiont of Datisca
           glomerata]
          Length = 221

 Score = 90.5 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 18/167 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            ++  ++ P +    F    +++    +  +   V   DG + L    E S+  S +LD 
Sbjct: 34  AELVRLLTPQLAARGFDLEDVTVSRAGSRSVVRVVVDRDGGVDLDAVAEASRVASAVLDA 93

Query: 83  EN--------IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
                      + G Y LEVSSPG+DRP+V    + R  G +V+        D ++L+G+
Sbjct: 94  AETDPAAGDPPLAGPYVLEVSSPGVDRPLVAPRHWHRARGRLVSVRTR----DGRELLGR 149

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV----TDE 177
           +  T E    L  E  G +      + ISF  ++ A + V    TDE
Sbjct: 150 VRATDEQTAELVLE--GGRTAVGEVLRISFADVVRAAVQVEFRATDE 194


>gi|312139327|ref|YP_004006663.1| hypothetical protein REQ_19140 [Rhodococcus equi 103S]
 gi|311888666|emb|CBH47978.1| conserved hypothetical protein [Rhodococcus equi 103S]
          Length = 181

 Score = 90.5 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 14/168 (8%)

Query: 27  SVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE-N 84
            ++   I    +    +++ L  ++  +++ V+ D G + L +   LS  IS + D   +
Sbjct: 3   ELLADPIGREGYGLEDVTITLAGRHSSVRVMVDSDSG-LELDEVARLSHVISDVFDAASD 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV+SPGIDRP+     + R  G  V  E+       + + G++   ++ G  
Sbjct: 62  FGESPYTLEVTSPGIDRPLTEGRHWRRAQGRKVLVELAE-----ESVTGRVGRLTDGGVD 116

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           L  + +G   +  +++A     +  A  +V  E  R          G+
Sbjct: 117 LVVKAKGGPVVRRVELA----DVKKA--VVQVEFSRPDAKELELAGGI 158


>gi|118473512|ref|YP_886961.1| hypothetical protein MSMEG_2624 [Mycobacterium smegmatis str. MC2
           155]
 gi|259585793|sp|A0QVM3|RIMP_MYCS2 RecName: Full=Ribosome maturation factor rimP
 gi|118174799|gb|ABK75695.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 181

 Score = 90.1 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-DGNMTLRDCEELSQAISPILD 81
             +  ++        +    + ++       +I +  D D  + L     LS+  S +LD
Sbjct: 16  KQVIELLDGEFARAGYEIDDV-VVNAATRPARITIVADGDKGLDLDAVAMLSRLASGLLD 74

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +  +  Y LEV+SPG+DRP+  +  F R  G      +     D   L  ++ GT   
Sbjct: 75  TVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSL----ADGSSLTARLGGTDGD 130

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              +   +  +  + +    I    +  A
Sbjct: 131 QVNVVVAQGKDFAVRQ----IPLREITKA 155


>gi|296171599|ref|ZP_06852839.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894054|gb|EFG73816.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 175

 Score = 89.7 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 8/148 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  ++        +    + +         + +   D  + L     LS++ S +LD 
Sbjct: 9   TQVIELLGGEFARAGYEIEDVVIDARARPPRIMVIADGDKALDLDTIATLSRSASALLDG 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + +   Y LEVSSPG+DRP+  +  F R  G  V   +     D  +L G++  T    
Sbjct: 69  LDDVGDRYVLEVSSPGVDRPLTSEKHFRRARGRKVDVVLS----DGSRLTGRVGETRGDT 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSA 170
             L          +     I+   +  A
Sbjct: 125 VALVV----RAGRDYRLREIARADIAKA 148


>gi|259586224|sp|A9BCI2|RIMP_PROM4 RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 89.7 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 2/146 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVER-DDGNMTLRDCEELSQAISP 78
           +   +  +      +     V++        + +Q+ +++    +++L DC + S+ IS 
Sbjct: 5   IVTSLKILASNTAADKGLEVVELKFNPHSKPITIQVQIQKKPKKDVSLDDCAQFSELISE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +++  +I   Y LE+SSPG+   +    DF  + G  +      +   K    G +   
Sbjct: 65  TIELSKLINEPYLLEISSPGLGDLLQTDKDFKTFKGFPIEVLFKNNENTKLTKSGLLHER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISF 164
           S+    +  + R  K   E  I +  
Sbjct: 125 SKEYLLINIKGRISKIPREDVITVQL 150


>gi|320094044|ref|ZP_08025866.1| hypothetical protein HMPREF9005_0478 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319979023|gb|EFW10544.1| hypothetical protein HMPREF9005_0478 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 161

 Score = 89.7 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 20/161 (12%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD--DGN-----MTLRDCE 70
                 +  ++ PV+         +         L+++ V+    +G      +      
Sbjct: 4   PARDARLEELLGPVVAREDLELDTVVRTRSGGTPLVRVTVDTPLVEGAGEQARVDSDTLA 63

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+S  LD  + I+G Y LEVS+PG +R +     + R  G  V  ++     D   
Sbjct: 64  AVSRAVSAALDRADPIDGEYLLEVSTPGAERELTEPRHWKRQVGLPVRVKLR----DGGH 119

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           + G++    +    LE +             I + ++  AR
Sbjct: 120 VSGRVRAADDVSATLETDGG--------TTTIEYANMKKAR 152


>gi|256824990|ref|YP_003148950.1| hypothetical protein Ksed_11450 [Kytococcus sedentarius DSM 20547]
 gi|256688383|gb|ACV06185.1| uncharacterized conserved protein [Kytococcus sedentarius DSM
           20547]
          Length = 160

 Score = 89.4 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 52/138 (37%), Gaps = 16/138 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVE-----RDDG-----NMTLRDCE 70
              +  +    +  +      + +    K  ++++ VE      D G      +TL    
Sbjct: 7   TERVWELSSAAVAPLGLEVPDVVITPAGKRSVVRVLVEPALPVDDAGDTVLEPITLDQVA 66

Query: 71  ELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E ++ +S  +D ++   E  Y LEVSSPG+DRP+     F R  G  V           +
Sbjct: 67  EATELVSTGIDADDPFGEQPYTLEVSSPGVDRPLTSLEHFRRAVGRRVE---FRPLEG-E 122

Query: 130 KLIGKIMGTSETGFFLEK 147
               +I   +E    LE 
Sbjct: 123 PFTERITRVAEEQIVLED 140


>gi|72161179|ref|YP_288836.1| hypothetical protein Tfu_0775 [Thermobifida fusca YX]
 gi|91208371|sp|Q47RV4|RIMP_THEFY RecName: Full=Ribosome maturation factor rimP
 gi|71914911|gb|AAZ54813.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 157

 Score = 89.0 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 9/154 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G       ++ ++ P++ E       + +       L   V   D  + L    E+SQ 
Sbjct: 1   MGAQARRERLAQLVAPILAEAGLDLEGLDITPVGKRRLVRVVVDSDDGVDLERIGEVSQK 60

Query: 76  ISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           IS  LD  +++    Y LEV+SPG+DRP+     + R  G +V   +V  +G +  + G+
Sbjct: 61  ISTALDEVDVMGQSPYVLEVTSPGVDRPLTEPRHWRRARGRLVHAPLV--AGGQ--VKGR 116

Query: 135 IMGTSETGFFLEKEKRGEK----DMNELQIAISF 164
           ++   ETG   + + + +     D+   ++ + F
Sbjct: 117 VIDADETGVTFDVDGQSQVYAFSDLGRGKVQVEF 150


>gi|325299859|ref|YP_004259776.1| Ribosome maturation factor rimP [Bacteroides salanitronis DSM
           18170]
 gi|324319412|gb|ADY37303.1| Ribosome maturation factor rimP [Bacteroides salanitronis DSM
           18170]
          Length = 155

 Score = 89.0 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 66/157 (42%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +++  ++   +  V +S+  +  ++++  ++  DG + + DC +LS+ I   L  E+
Sbjct: 7   VTRIVEEWLDGKDYFLVDVSVSPDDKIVVE--IDHADG-VWIDDCVDLSRYIESRLSRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +  + G  V           +K  G +   +E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLKQYQIYIGKEVEV----MDNTGKKWKGVLADANEENFT 116

Query: 145 LEK------EKRGEKDMNELQIAISFDSLLSARLIVT 175
           +        E      + E  +  ++D +   + +++
Sbjct: 117 VTMTVKVKPEGAKRPKLVEQNVTFTYDEIKYTKYLIS 153


>gi|163753870|ref|ZP_02160993.1| hypothetical protein KAOT1_19647 [Kordia algicida OT-1]
 gi|161326084|gb|EDP97410.1| hypothetical protein KAOT1_19647 [Kordia algicida OT-1]
          Length = 155

 Score = 88.6 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 17/160 (10%)

Query: 23  GDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++ ++Q V+EE S    +   +     ++  I ++ D+G +TL DC ++S+ I   LD
Sbjct: 4   EKVTKLLQEVLEEESSLFLISKEIQAGNKIV--IVIDGDNG-VTLNDCMKVSRHIEHNLD 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            E   E  + LEV S GI   +     + +  G     ++ +   D QK+ G ++   + 
Sbjct: 61  RE---EEDFSLEVLSSGISEGITHIRQYKKNVGR----KLEIIMADNQKVTGTLVEADDE 113

Query: 142 GFFLEKEKRGEKDMNELQI------AISFDSLLSARLIVT 175
              L+ + R  K + + +I       I +  ++ A+++VT
Sbjct: 114 KVKLQWKAREPKPIGKGKITVQKEQEIPYKDIVKAKVMVT 153


>gi|313205356|ref|YP_004044013.1| hypothetical protein Palpr_2899 [Paludibacter propionicigenes WB4]
 gi|312444672|gb|ADQ81028.1| protein of unknown function DUF150 [Paludibacter propionicigenes
           WB4]
          Length = 155

 Score = 88.2 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 16/162 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   I+ +++  ++   +  V + + ++    + + ++  DG ++L  C EL++ I  
Sbjct: 1   MILKTTINQIVENYLDNTDYYLVDVKVTQDNR--ISVEIDSFDG-VSLEFCAELNRHIES 57

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
             D E      + LEVSS G+  P      + +  G+ V           +KL G +   
Sbjct: 58  QFDRE---VEDFELEVSSAGLTEPFKVLKQYEKNIGNEVETLTK----GGKKLSGVLKEV 110

Query: 139 SETGFFLEKEK------RGEKDMNELQIAISFDSLLSARLIV 174
            E  F LE EK         K      +  S++ +   + I+
Sbjct: 111 HEDNFVLEIEKTEKPEGAKRKTTIIEDVTFSYEDIKYTKYII 152


>gi|311744142|ref|ZP_07717948.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
 gi|311313272|gb|EFQ83183.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
          Length = 160

 Score = 88.2 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 72/156 (46%), Gaps = 13/156 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +    +++++  +E        +++    +  +L++ ++ DDG + +     +++A++ +
Sbjct: 1   MDERFTALVRSCVEPEGLELDDLTISAAGRKRVLRVALDSDDG-VGIDQITAVTRALNAV 59

Query: 80  LD-----VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           LD     V  +    Y LEV+S G+  P+     + R +G +V  E+   + +     G+
Sbjct: 60  LDDDPAAVAALGGTPYTLEVTSRGVSSPLTSPRHWRRNHGRLVKVELTDGAVE----TGR 115

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           I  +++T   L +++R     +  +IA     +  A
Sbjct: 116 ITSSTDTHATLAQQERRGAPTDIREIAYP--EVARA 149


>gi|33863792|ref|NP_895352.1| hypothetical protein PMT1525 [Prochlorococcus marinus str. MIT
           9313]
 gi|51316777|sp|Q7V5M7|RIMP_PROMM RecName: Full=Ribosome maturation factor rimP
 gi|33635375|emb|CAE21700.1| DUF150 [Prochlorococcus marinus str. MIT 9313]
          Length = 154

 Score = 88.2 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 60/154 (38%), Gaps = 11/154 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISP 78
           L  D+ ++         ++   +        + +Q+ + R DG+ ++L DC   S ++  
Sbjct: 5   LLPDLETLASATAAGKGYKLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSASMDE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+   +    Y LE+SSPGI   +    DFL + G  V         D  +  G +   
Sbjct: 65  ALEASQLFTEAYVLEISSPGIGDQLHSDQDFLTFRGFPVEISFRDHDSDLHQ-AGLLHKR 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           S+    +  + R ++        I   ++   RL
Sbjct: 124 SDEHVHINIKGRIQR--------IPRKAVTCVRL 149


>gi|124022126|ref|YP_001016433.1| hypothetical protein P9303_04161 [Prochlorococcus marinus str. MIT
           9303]
 gi|167012912|sp|A2C6Q8|RIMP_PROM3 RecName: Full=Ribosome maturation factor rimP
 gi|123962412|gb|ABM77168.1| DUF150 [Prochlorococcus marinus str. MIT 9303]
          Length = 154

 Score = 87.8 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 60/154 (38%), Gaps = 11/154 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISP 78
           L  D+ ++         ++   +        + +Q+ + R DG+ ++L DC   S ++  
Sbjct: 5   LLPDLETLASATATGKGYKLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSASMDE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+   +    Y LE+SSPGI   +    DFL + G  V         D  +  G +   
Sbjct: 65  ALEASQLFTEAYVLEISSPGIGDQLHSDQDFLTFRGFPVEISFRDDDSDLHQ-AGLLHKR 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           S+    +  + R ++        I   ++   RL
Sbjct: 124 SDEHVHINIKGRIQR--------IPRKAVTCVRL 149


>gi|288928620|ref|ZP_06422466.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288329604|gb|EFC68189.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 154

 Score = 87.8 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 58/138 (42%), Gaps = 14/138 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  +++  + +  +  V +    +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKELVEQWLADKEYFLVDVETSPDSRIVVE--IDHADG-VWIEDCVELSRFIEEHLNRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         D +K  G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVPQQYVNFIGKEVEV----LDKDGKKYKGILKSVDGND 114

Query: 143 FFLEKEKRGEKDMNELQI 160
           F +   ++ + +  +  +
Sbjct: 115 FVVAVNEKVKVEGKKRPV 132


>gi|126697020|ref|YP_001091906.1| hypothetical protein P9301_16821 [Prochlorococcus marinus str. MIT
           9301]
 gi|166980189|sp|A3PEY0|RIMP_PROM0 RecName: Full=Ribosome maturation factor rimP
 gi|126544063|gb|ABO18305.1| DUF150 [Prochlorococcus marinus str. MIT 9301]
          Length = 155

 Score = 87.4 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 66/149 (44%), Gaps = 10/149 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDG-NMTLRDCEELSQAISPIL 80
             +  +++ V  +       +++   +N ++ +I +++ +G +++L DC   +   S  +
Sbjct: 7   SKLEKLLENVANKQDLEIYSLNIQTNQNPIVIEIIIKKTNGNDVSLDDCALFNTPASDEI 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +  N++   Y LE+SS G+   +  + DF  + G  V  E+   +   + L G +   S 
Sbjct: 67  EKSNLLNCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSKIKFLNGLLYEKSN 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLS 169
               +  + R +K        I FD +L 
Sbjct: 127 DYLAINIKGRIKK--------IPFDEVLK 147


>gi|304390823|ref|ZP_07372775.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304325706|gb|EFL92952.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 159

 Score = 87.4 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTL--RDCEELSQAISPILD 81
           I  V+ PV+E       +I++   K+  ++ I ++  DG   L     E+ S+AI   LD
Sbjct: 4   IIQVVNPVVEAAGLYLEKIAVTGPKHQRVVAINLDLPDGVDNLGSAQLEDASRAIGAALD 63

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + + G Y LE+S+ G +  +       R  G  V           Q   G +   +ET
Sbjct: 64  AADPLSGAYTLEISTLGAEHELTNLRLARRALGKDVEVRT-----GGQVRAGILTEVTET 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G  +  +               F+ + S R ++
Sbjct: 119 GLSVNDDGDVTVY--------PFEDIESVRTVI 143


>gi|120403302|ref|YP_953131.1| hypothetical protein Mvan_2311 [Mycobacterium vanbaalenii PYR-1]
 gi|259585796|sp|A1T7H5|RIMP_MYCVP RecName: Full=Ribosome maturation factor rimP
 gi|119956120|gb|ABM13125.1| protein of unknown function DUF150 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 176

 Score = 87.0 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            +  ++        +    + +    +   + +  + D G + L    ELS+  S +LD 
Sbjct: 13  QVVELLDGEFTRAGYDLEDVVIDAASRPPRITVVTDSDHG-LDLDSVAELSRIASELLDG 71

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            +     Y LEV+SPG+DRP+  +  + R  G +    +     D   L G+I G ++  
Sbjct: 72  LD--SAPYVLEVTSPGVDRPLTTEKHYRRARGRLAEITLT----DGSVLTGRIGGVADGT 125

Query: 143 F-FLEKEKRGEKDMNELQIAISFDSLLSA 170
              + +E R    + E    I+ +++  A
Sbjct: 126 VGVVVREGRSNLSVRE----IALNAIAKA 150


>gi|283769340|ref|ZP_06342239.1| conserved hypothetical protein [Bulleidia extructa W1219]
 gi|283103997|gb|EFC05381.1| conserved hypothetical protein [Bulleidia extructa W1219]
          Length = 150

 Score = 87.0 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M    +I +++ P +++  F   +++ +  K   LQI V    G   L  C + S+ IS 
Sbjct: 1   MNRIDEIKALVVPALKKQGFEVEEVTWIS-KERTLQISVHNLQGETDLEACAKASECISD 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH-VVACEIVLSSGDKQKLIGKIMG 137
           +LD  +++   Y LEV SPG +R +    D         V  E   +    Q L G ++ 
Sbjct: 60  MLDENDLMLEGYTLEVCSPGAEREI---QDIHSIQDESYVHVEFKEAMNHHQSLEGYLVP 116

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISF 164
           T E      +EK   K +   +  I+F
Sbjct: 117 TQEGYELHYREKAVLKKVKLNEENIAF 143


>gi|315656400|ref|ZP_07909289.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315492959|gb|EFU82561.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 159

 Score = 87.0 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTL--RDCEELSQAISPILD 81
           I  V+ PV+E       +I++   K+  ++ I ++  DG   L     E+ S+AI   LD
Sbjct: 4   IIQVVNPVVEAAGLYLEKIAVTGPKHQRVVAINLDLPDGVDNLGSAQLEDASRAIGAALD 63

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + + G Y LE+S+ G +  +       R  G  V           Q   G +   +ET
Sbjct: 64  AADPLSGAYTLEISTLGAEHELTNLRLARRALGKDVEVRT-----GGQVRAGILTEVTET 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G  +  +               F+ + S R ++
Sbjct: 119 GLSVNDDGDVTVY--------PFEDIESVRTVI 143


>gi|225012170|ref|ZP_03702607.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-2A]
 gi|225003725|gb|EEG41698.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-2A]
          Length = 154

 Score = 87.0 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 17/163 (10%)

Query: 19  MGLAGDISSVIQPVIEE-MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     + S+++  +EE  S   + + +  + ++   I ++ D G +TL+DC  +S+AI 
Sbjct: 1   MNFRSKVESLLEAALEEDQSLFLIDLKIGSDNSIH--ITLDGDQG-VTLKDCVNVSRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E      + LEV+S G+  P++    +++  G  +  E +  S     L G +  
Sbjct: 58  HNLDREEY---DFSLEVASAGVGSPLLNSRQYIKNIGRKLRVESMEVS----TLEGTLTA 110

Query: 138 TSETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
                F LE ++R  K + + ++       +S+D +  A+++V
Sbjct: 111 ADNQAFTLEWKQREAKPVGKGKVTVTKQKTLSYDQISIAKVLV 153


>gi|213021801|ref|ZP_03336248.1| hypothetical protein Salmonelentericaenterica_03335 [Salmonella
          enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 59

 Score = 86.7 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 28 VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
          +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ I 
Sbjct: 1  MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDPIS 59


>gi|194476585|ref|YP_002048764.1| hypothetical protein PCC_0102 [Paulinella chromatophora]
 gi|171191592|gb|ACB42554.1| hypothetical protein PCC_0102 [Paulinella chromatophora]
          Length = 159

 Score = 86.7 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           + ++++ DC   S+ +   LD  ++++  Y LEVSSPGI+  ++   DF  + G  V   
Sbjct: 49  ERDVSINDCTVFSRQVEEALDNSSLLKEAYILEVSSPGINEELINDRDFRIFRGFPVEVV 108

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +  S     +  G ++   +    +    R  +        I  + ++S  LI+
Sbjct: 109 VNKSKTPTNRREGLLLERDDDSILINIRGRIHR--------IPREDVISVHLIM 154


>gi|189459825|ref|ZP_03008610.1| hypothetical protein BACCOP_00455 [Bacteroides coprocola DSM 17136]
 gi|189433435|gb|EDV02420.1| hypothetical protein BACCOP_00455 [Bacteroides coprocola DSM 17136]
          Length = 155

 Score = 86.7 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +++  +E   +  V +++  +  ++++  ++  +G + + DC +LS+ I   L+ E 
Sbjct: 7   VTRIVEEWLEGKDYFLVDVTVTPDDKIVVE--IDHAEG-VWIDDCVDLSRYIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      ++   G  V         D +K  G +   +E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYIIHIGKEVEV----LGKDGKKWTGVLTDANEENFT 116

Query: 145 LEK------EKRGEKDMNELQIAISFDSLLSARLIVT 175
           +        E      + E  +   +D +   + +++
Sbjct: 117 ITVQVKVKPEGAKRPKLVEQNVTFVYDEIKYTKYLIS 153


>gi|288924203|ref|ZP_06418239.1| protein of unknown function DUF150 [Frankia sp. EUN1f]
 gi|288344450|gb|EFC78943.1| protein of unknown function DUF150 [Frankia sp. EUN1f]
          Length = 325

 Score = 86.7 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 29/180 (16%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
            +   + S ++P +    F    +++    +  +   V   D  + L    + S+ +S  
Sbjct: 43  AIRAQLRSRLEPRLAAAGFDLEDVTVARAGSRSVVRVVVDRDEGIDLDAVADASRIVSAT 102

Query: 80  LDVEN----------------------IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           LD +                        + G Y LEV+SPG+DRP+V    + R  G +V
Sbjct: 103 LDEDEQGSAAERGDAAGARPLSGSGAGPLGGPYVLEVTSPGVDRPLVEPRHWRRAVGRLV 162

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS---FDSLLSARLIV 174
                    D  ++ G+++   + G  L       +     +  +    + ++  A + V
Sbjct: 163 LVR----RADGSEVEGRVLSAGDDGADLAIPTGVARRGRPARTRLERVVYSTVTRATVQV 218


>gi|317504199|ref|ZP_07962193.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315664688|gb|EFV04361.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 186

 Score = 86.3 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 66/159 (41%), Gaps = 20/159 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  +++  +    +  V I + ++  ++++  ++  DG + + DC +LS+ I   L  D 
Sbjct: 38  VKKLVEEWLAGKEYFLVGIEISQDDKIVVE--IDHADG-VWIEDCVDLSKYIEDHLSRDE 94

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         D +K  G +       
Sbjct: 95  ED-----YELEVGSAGLGQPFKVLQQYINFIGKEVEV----LDADGKKYQGVLKSVDGND 145

Query: 143 FF------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           F       ++ E +      ++    + D++   + +++
Sbjct: 146 FTVTVNEKVKVEGKKRPQKMDVDHTFNMDNVKYTKYLIS 184


>gi|158313031|ref|YP_001505539.1| hypothetical protein Franean1_1179 [Frankia sp. EAN1pec]
 gi|259585776|sp|A8L6F1|RIMP_FRASN RecName: Full=Ribosome maturation factor rimP
 gi|158108436|gb|ABW10633.1| protein of unknown function DUF150 [Frankia sp. EAN1pec]
          Length = 308

 Score = 86.3 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 29/172 (16%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++   ++P +    F    +S+       +   V   DG + L    + S+ +S +LD E
Sbjct: 35  ELRRRLEPSLTTAGFDLEDVSVTRAGARSVVRVVVDRDGGIDLDAVADASRLVSAVLDGE 94

Query: 84  N----------------------IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           +                       I G Y LEV+SPG+DRP+V    + R  G +V    
Sbjct: 95  DIGTDGAGGTGGSGGAAGGSGASPISGAYVLEVTSPGVDRPLVEPRHWRRAVGRLVVVR- 153

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS---FDSLLSA 170
                D  ++ G+++   + G  L       +    ++  I    + ++  A
Sbjct: 154 ---RADGVEVEGRVLSADDEGADLAVPTAPARRGRPVRRRIERVVYATVARA 202


>gi|33241095|ref|NP_876037.1| hypothetical protein Pro1646 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|51316781|sp|Q7VA23|RIMP_PROMA RecName: Full=Ribosome maturation factor rimP
 gi|33238624|gb|AAQ00690.1| Uncharacterized YhbC family conserved protein [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 155

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 37  SFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
            F  +++ +L + K + +Q+ +   +G +++L DC  LS+ I  +++   +I   Y LE+
Sbjct: 21  GFEIIRLEVLAQMKPMKIQLQIRHKNGSDVSLEDCSRLSRPIGEVIENSKLINQSYILEI 80

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPG+   +    +F  + G  +       S       G +   S+    +  + +  K 
Sbjct: 81  SSPGLSDILETDKEFATFKGFPIQVSTKNKSNSTILQNGLLHTKSKEHLLINIKGKMSK- 139

Query: 155 MNELQIAISFDSLLSARLI-VTD 176
                  I  D+++  RL   TD
Sbjct: 140 -------IPIDNVIQVRLASPTD 155


>gi|15609979|ref|NP_217358.1| hypothetical protein Rv2842c [Mycobacterium tuberculosis H37Rv]
 gi|15842383|ref|NP_337420.1| hypothetical protein MT2908 [Mycobacterium tuberculosis CDC1551]
 gi|31794019|ref|NP_856512.1| hypothetical protein Mb2867c [Mycobacterium bovis AF2122/97]
 gi|121638722|ref|YP_978946.1| hypothetical protein BCG_2862c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662683|ref|YP_001284206.1| hypothetical protein MRA_2865 [Mycobacterium tuberculosis H37Ra]
 gi|148824032|ref|YP_001288786.1| hypothetical protein TBFG_12857 [Mycobacterium tuberculosis F11]
 gi|167967195|ref|ZP_02549472.1| hypothetical protein MtubH3_03787 [Mycobacterium tuberculosis
           H37Ra]
 gi|215404814|ref|ZP_03416995.1| hypothetical protein Mtub0_14218 [Mycobacterium tuberculosis
           02_1987]
 gi|215412674|ref|ZP_03421392.1| hypothetical protein Mtub9_14980 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428281|ref|ZP_03426200.1| hypothetical protein MtubT9_18553 [Mycobacterium tuberculosis T92]
 gi|215431784|ref|ZP_03429703.1| hypothetical protein MtubE_14186 [Mycobacterium tuberculosis
           EAS054]
 gi|215447096|ref|ZP_03433848.1| hypothetical protein MtubT_14592 [Mycobacterium tuberculosis T85]
 gi|218754590|ref|ZP_03533386.1| hypothetical protein MtubG1_14629 [Mycobacterium tuberculosis GM
           1503]
 gi|219558859|ref|ZP_03537935.1| hypothetical protein MtubT1_16742 [Mycobacterium tuberculosis T17]
 gi|224991214|ref|YP_002645903.1| hypothetical protein JTY_2857 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798072|ref|YP_003031073.1| hypothetical protein TBMG_01130 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232937|ref|ZP_04926264.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254365488|ref|ZP_04981533.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551906|ref|ZP_05142353.1| hypothetical protein Mtube_15842 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260187858|ref|ZP_05765332.1| hypothetical protein MtubCP_17794 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260201973|ref|ZP_05769464.1| hypothetical protein MtubT4_18245 [Mycobacterium tuberculosis T46]
 gi|260206153|ref|ZP_05773644.1| hypothetical protein MtubK8_17835 [Mycobacterium tuberculosis K85]
 gi|289444393|ref|ZP_06434137.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448504|ref|ZP_06438248.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553370|ref|ZP_06442580.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289571030|ref|ZP_06451257.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575543|ref|ZP_06455770.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746640|ref|ZP_06506018.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751503|ref|ZP_06510881.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754950|ref|ZP_06514328.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758962|ref|ZP_06518340.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763018|ref|ZP_06522396.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|294994067|ref|ZP_06799758.1| hypothetical protein Mtub2_06033 [Mycobacterium tuberculosis 210]
 gi|297635455|ref|ZP_06953235.1| hypothetical protein MtubK4_15097 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732454|ref|ZP_06961572.1| hypothetical protein MtubKR_15262 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526310|ref|ZP_07013719.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777126|ref|ZP_07415463.1| hypothetical protein TMAG_01041 [Mycobacterium tuberculosis
           SUMu001]
 gi|306781032|ref|ZP_07419369.1| hypothetical protein TMBG_02983 [Mycobacterium tuberculosis
           SUMu002]
 gi|306785670|ref|ZP_07423992.1| hypothetical protein TMCG_02090 [Mycobacterium tuberculosis
           SUMu003]
 gi|306789710|ref|ZP_07428032.1| hypothetical protein TMDG_00030 [Mycobacterium tuberculosis
           SUMu004]
 gi|306794343|ref|ZP_07432645.1| hypothetical protein TMEG_03985 [Mycobacterium tuberculosis
           SUMu005]
 gi|306798767|ref|ZP_07437069.1| hypothetical protein TMFG_00036 [Mycobacterium tuberculosis
           SUMu006]
 gi|306804613|ref|ZP_07441281.1| hypothetical protein TMHG_02045 [Mycobacterium tuberculosis
           SUMu008]
 gi|306807353|ref|ZP_07444021.1| hypothetical protein TMGG_02026 [Mycobacterium tuberculosis
           SUMu007]
 gi|306973242|ref|ZP_07485903.1| hypothetical protein TMJG_01830 [Mycobacterium tuberculosis
           SUMu010]
 gi|307080951|ref|ZP_07490121.1| hypothetical protein TMKG_03274 [Mycobacterium tuberculosis
           SUMu011]
 gi|307085546|ref|ZP_07494659.1| hypothetical protein TMLG_01328 [Mycobacterium tuberculosis
           SUMu012]
 gi|313659786|ref|ZP_07816666.1| ribosome maturation protein RimP [Mycobacterium tuberculosis KZN
           V2475]
 gi|54040615|sp|P67215|RIMP_MYCBO RecName: Full=Ribosome maturation factor rimP
 gi|54042962|sp|P67214|RIMP_MYCTU RecName: Full=Ribosome maturation factor rimP
 gi|166988534|sp|A1KMI5|RIMP_MYCBP RecName: Full=Ribosome maturation factor rimP
 gi|166988535|sp|A5U6J4|RIMP_MYCTA RecName: Full=Ribosome maturation factor rimP
 gi|254801565|sp|C1AFV6|RIMP_MYCBT RecName: Full=Ribosome maturation factor rimP
 gi|2078017|emb|CAB08448.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13882682|gb|AAK47234.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31619613|emb|CAD95052.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494370|emb|CAL72851.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601996|gb|EAY61006.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151001|gb|EBA43046.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506835|gb|ABQ74644.1| hypothetical protein MRA_2865 [Mycobacterium tuberculosis H37Ra]
 gi|148722559|gb|ABR07184.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774329|dbj|BAH27135.1| hypothetical protein JTY_2857 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319575|gb|ACT24178.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           1435]
 gi|289417312|gb|EFD14552.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421462|gb|EFD18663.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438002|gb|EFD20495.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289539974|gb|EFD44552.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544784|gb|EFD48432.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687168|gb|EFD54656.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692090|gb|EFD59519.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695537|gb|EFD62966.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710524|gb|EFD74540.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289714526|gb|EFD78538.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496104|gb|EFI31398.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214495|gb|EFO73894.1| hypothetical protein TMAG_01041 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326140|gb|EFP14991.1| hypothetical protein TMBG_02983 [Mycobacterium tuberculosis
           SUMu002]
 gi|308329670|gb|EFP18521.1| hypothetical protein TMCG_02090 [Mycobacterium tuberculosis
           SUMu003]
 gi|308333809|gb|EFP22660.1| hypothetical protein TMDG_00030 [Mycobacterium tuberculosis
           SUMu004]
 gi|308337335|gb|EFP26186.1| hypothetical protein TMEG_03985 [Mycobacterium tuberculosis
           SUMu005]
 gi|308340978|gb|EFP29829.1| hypothetical protein TMFG_00036 [Mycobacterium tuberculosis
           SUMu006]
 gi|308346276|gb|EFP35127.1| hypothetical protein TMGG_02026 [Mycobacterium tuberculosis
           SUMu007]
 gi|308348793|gb|EFP37644.1| hypothetical protein TMHG_02045 [Mycobacterium tuberculosis
           SUMu008]
 gi|308357360|gb|EFP46211.1| hypothetical protein TMJG_01830 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361313|gb|EFP50164.1| hypothetical protein TMKG_03274 [Mycobacterium tuberculosis
           SUMu011]
 gi|308364914|gb|EFP53765.1| hypothetical protein TMLG_01328 [Mycobacterium tuberculosis
           SUMu012]
 gi|323718541|gb|EGB27711.1| hypothetical protein TMMG_03713 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326904455|gb|EGE51388.1| hypothetical protein TBPG_02361 [Mycobacterium tuberculosis W-148]
 gi|328457845|gb|AEB03268.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           4207]
          Length = 183

 Score = 85.9 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 11/150 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++        +    + +           +   D  + L     LS+  S +LD  
Sbjct: 10  QVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASALLDGL 69

Query: 84  N---IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +    I G Y LEVSSPG++RP+  +  F R  G  V   +     D  +L G++     
Sbjct: 70  DGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLS----DGSRLTGRVGEMRA 125

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               L       +D       I    ++ A
Sbjct: 126 GTVALVI----REDRGWAVREIPLAEIVKA 151


>gi|306968906|ref|ZP_07481567.1| hypothetical protein TMIG_02342 [Mycobacterium tuberculosis
           SUMu009]
 gi|308353519|gb|EFP42370.1| hypothetical protein TMIG_02342 [Mycobacterium tuberculosis
           SUMu009]
          Length = 183

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 11/150 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++        +    + +           +   D  + L     LS+  S +LD  
Sbjct: 10  QVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASALLDGL 69

Query: 84  N---IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +    I G Y LEVSSPG++RP+  +  F R  G  V   +     D  +L G++     
Sbjct: 70  DGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLS----DGSRLTGRVGEMRA 125

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               L       +D       I    ++ A
Sbjct: 126 GTVALVI----REDRGWAVREIPLAEIVKA 151


>gi|299783111|gb|ADJ41109.1| Ribosome maturation factor rimP [Lactobacillus fermentum CECT 5716]
          Length = 81

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE 152
           EVSSPG +RP+ ++ D+ R     V   +       +   G +   S     +E   +  
Sbjct: 2   EVSSPGAERPLKKEVDYQRALDQYVNVSLYQQIDGHKVFEGYLRQLSPDELTIEYMDKTR 61

Query: 153 KDMNELQIAISFDSLLSARLIV 174
           +     Q+ I  D +  ARL +
Sbjct: 62  QK----QVVIPRDKVAKARLAI 79


>gi|283458509|ref|YP_003363137.1| hypothetical protein RMDY18_14850 [Rothia mucilaginosa DY-18]
 gi|283134552|dbj|BAI65317.1| uncharacterized protein conserved in archaea [Rothia mucilaginosa
           DY-18]
          Length = 223

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 13/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVE---RDDGNMTLRDCEELSQAIS 77
             +++  I PVI E S     + +     N  ++I V+       +++L    E+S AIS
Sbjct: 56  EEEVAEAIAPVISEFSLVLEGLKISGPAANRTVKITVDYTAERTDSLSLDSLAEISGAIS 115

Query: 78  PILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +  +    Y LEVSSPG  R +  +  + R    ++A      + D  + + ++
Sbjct: 116 SALDRADENDEFFPYELEVSSPGATRALTERRHWERARTRLIAVT----APDGTEYLARL 171

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIA---ISFDSLLSARL 172
               + G  L ++K  +K   E       + ++++ SA +
Sbjct: 172 HEVQDDGPVLARKKNTKKGQKESYHEPSLLPWENIASAHV 211


>gi|41409008|ref|NP_961844.1| hypothetical protein MAP2910c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|51316952|sp|Q73VV1|RIMP_MYCPA RecName: Full=Ribosome maturation factor rimP
 gi|41397367|gb|AAS05227.1| hypothetical protein MAP_2910c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 178

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 8/148 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  ++        +    + +           +   D  + L     LS++ S +LD 
Sbjct: 9   TQVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSRSASALLDK 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + IE HY LEVSSPG+DRP+     F R  G  V   +     D   + G++  T +  
Sbjct: 69  LDTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKVDVVLS----DNSTVTGRVGETGDDT 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSA 170
             L          +     I    ++ A
Sbjct: 125 IALVV----RAGRDWAIREIPLGDVVKA 148


>gi|257068212|ref|YP_003154467.1| hypothetical protein Bfae_10290 [Brachybacterium faecium DSM 4810]
 gi|256559030|gb|ACU84877.1| uncharacterized conserved protein [Brachybacterium faecium DSM
           4810]
          Length = 220

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 61/164 (37%), Gaps = 18/164 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD---GNMTLRDCEELSQAISPIL 80
           +      V+        ++ +        +++ V+  +   G+  L    E S+A+S  +
Sbjct: 10  LRETATEVLASHGLVLEEVEIRRGGGTPQVRLIVDLPEDQLGSADLDTVAEASRALSEAV 69

Query: 81  DVENIIEGHY--RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           D ++ + G     LEV++PG+DR +     F R  G +++        +   L  +++  
Sbjct: 70  DADDAVLGSAPVLLEVTTPGVDRELTAPRHFRRARGRLLSLTT----EEGTTLRARLLAV 125

Query: 139 SETGFFLEKEKRGEKDMNE--------LQIAISFDSLLSARLIV 174
                 L +E   +              ++ +    +  AR+ V
Sbjct: 126 DGEELALRQEPGRDDRGRPLKLPAGTTERLRLPLAEVARARVEV 169


>gi|300788186|ref|YP_003768477.1| hypothetical protein AMED_6341 [Amycolatopsis mediterranei U32]
 gi|299797700|gb|ADJ48075.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 168

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 11/143 (7%)

Query: 30  QPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV-ENIIE 87
              +    F      + +  +  L+++ V+ DDG + L +  E+S+ +S  LD  E+++ 
Sbjct: 2   AEAVTAAGFDLDSFEVQQAGRRQLVKVVVDSDDG-VGLDEIAEISRTVSATLDENEHVLA 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEV+SPG+DRP+ +   + R    +V       +      +G++    E    +  
Sbjct: 61  SAYTLEVTSPGLDRPLTQPRHWRRARFRLVKISPAEGAP----FVGRVGHAGEDAARVLA 116

Query: 148 EKRGEK----DMNELQIAISFDS 166
             +       D+ +  + I F  
Sbjct: 117 GGKLRDVRYADVEKAVVEIEFKQ 139


>gi|118464499|ref|YP_882873.1| hypothetical protein MAV_3696 [Mycobacterium avium 104]
 gi|166990891|sp|A0QIY5|RIMP_MYCA1 RecName: Full=Ribosome maturation factor rimP
 gi|118165786|gb|ABK66683.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 178

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 8/148 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  ++        +    + +           +   D  + L     LS++ S +LD 
Sbjct: 9   TQVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSRSASALLDK 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + IE HY LEVSSPG+DRP+     F R  G  V   +     D   + G++  T +  
Sbjct: 69  LDTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKVDVVLS----DNSTVTGRVGETGDDT 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSA 170
             L          +     I    ++ A
Sbjct: 125 VALVV----RAGRDWAIREIPLGDVVKA 148


>gi|120434525|ref|YP_860221.1| hypothetical protein GFO_0156 [Gramella forsetii KT0803]
 gi|166979794|sp|A0LXP9|RIMP_GRAFK RecName: Full=Ribosome maturation factor rimP
 gi|117576675|emb|CAL65144.1| protein containing DUF150 [Gramella forsetii KT0803]
          Length = 153

 Score = 85.5 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 69/161 (42%), Gaps = 16/161 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +  + + V EE +     ISL       ++I ++ D+G +++ DC  +S+ I   L
Sbjct: 2   LKEKVEKLAEKVFEENN-SLFLISLDINSANHIKIVLDGDEG-VSVNDCIMVSRGIEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E   E  + LEV+S G+  P+     + +  G  +  +      +  K    ++   +
Sbjct: 60  DRE---EEDFSLEVTSAGVSEPLSMPRQYKKNIGRRLQVKT-----ENDKFEADLLSADQ 111

Query: 141 TGFFLEKEKRGEKDMN------ELQIAISFDSLLSARLIVT 175
               L  + R  K +       + ++ + +  ++ A++ +T
Sbjct: 112 NEIKLSWKAREPKPVGKGKVTVQKEVVLPYTDIVEAKVKIT 152


>gi|154491956|ref|ZP_02031582.1| hypothetical protein PARMER_01586 [Parabacteroides merdae ATCC
           43184]
 gi|154088197|gb|EDN87242.1| hypothetical protein PARMER_01586 [Parabacteroides merdae ATCC
           43184]
          Length = 157

 Score = 85.1 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 20/152 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--V 82
           IS +++  +       V + +      L+ I ++ D+G + + DC ELS+ +   LD  V
Sbjct: 9   ISQLVEEKLASSGNYLVDVVIKPGN--LIIIEIDNDEG-VCIDDCAELSRYVEGHLDRDV 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     + LEV S GI  P      +++  G+ V   +        KL G +    E G
Sbjct: 66  ED-----FELEVGSAGITSPFKVLRQYVKNIGNEVEMLLKS----GTKLTGVLKSADENG 116

Query: 143 FFLEKEKRGEKDMNELQIAI------SFDSLL 168
             +  EK+ + +  + ++ +      +FD + 
Sbjct: 117 VVVTVEKQVKPEGAKRKVTVREDQSYTFDEIK 148


>gi|255326387|ref|ZP_05367471.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
 gi|255296604|gb|EET75937.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
          Length = 223

 Score = 84.7 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 13/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVE---RDDGNMTLRDCEELSQAIS 77
             +++  I PVI E S     + +     N  ++I V+       +++L    E+S AIS
Sbjct: 56  EEEVAEAIAPVISEFSLVLEGLKISGPAANRTVKITVDYTAERTDSLSLDSLAEISGAIS 115

Query: 78  PILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +  +    Y LEVSSPG  R +  +  + R    ++A      + D  + + ++
Sbjct: 116 SALDRADENDEFFPYELEVSSPGATRALTERRHWERARTRLIAVT----APDGTEYLARL 171

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIA---ISFDSLLSARL 172
               + G  L ++K  +K   E       + ++++ SA +
Sbjct: 172 HEVQDEGPVLARKKNTKKGQKESYHEPSLLPWENIASAHV 211


>gi|325269684|ref|ZP_08136297.1| hypothetical protein HMPREF9141_1507 [Prevotella multiformis DSM
           16608]
 gi|324988052|gb|EGC20022.1| hypothetical protein HMPREF9141_1507 [Prevotella multiformis DSM
           16608]
          Length = 183

 Score = 84.7 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 14/143 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           + S++   +E   +  V I +  +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 35  VKSLVDEWLEGKEYFLVDIQISPDDKIVVE--IDHADG-VWIEDCVELSRYIEDRLSRDE 91

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      +  + G  V         D +K+ G +       
Sbjct: 92  ED-----YELEVGSAGLGQPFKVPQQYQNFIGKEVEV----LDKDGKKVKGVLKSVDGND 142

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
           F +   ++   +  +  + +  D
Sbjct: 143 FVVAVNEKVHVEGKKRPVKMDVD 165


>gi|42526618|ref|NP_971716.1| hypothetical protein TDE1108 [Treponema denticola ATCC 35405]
 gi|51316704|sp|Q73NP4|RIMP_TREDE RecName: Full=Ribosome maturation factor rimP
 gi|41816811|gb|AAS11597.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
 gi|325473160|gb|EGC76356.1| hypothetical protein HMPREF9353_02549 [Treponema denticola F0402]
          Length = 148

 Score = 84.3 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 64/143 (44%), Gaps = 14/143 (9%)

Query: 30  QPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           +P++E + F+ V +++L +K+   ++  ++ + G + ++DC  + + + P ++   I   
Sbjct: 16  EPLVEGLGFKLVDLNVLHKKDVWQVKAVIKSEKG-VGIKDCTSVHRTLQPRIEAL-IGSQ 73

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
              +EVSSPGI+R + R  +F  + G          +       G I   +  G  L  +
Sbjct: 74  DVTMEVSSPGINRLVKRAVEFYAFVGEEAQIWDNSITD---WRHGIIKEVNSEGLVLNSD 130

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
            +         I I +  +  AR
Sbjct: 131 NQ--------DIQIPYQDIKKAR 145


>gi|89889479|ref|ZP_01200990.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89517752|gb|EAS20408.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 155

 Score = 84.3 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 74/161 (45%), Gaps = 15/161 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +  ++    EE       + +  +    +++ ++ D+G +T+ DC  +S+A+   L
Sbjct: 2   LKETVQDLLDDAFEERP-DLFLMEMSIDGANEIKVIIDGDEG-VTVADCIFISRAVEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D + +    + LEV+S G   P+     F R  G  +         +K+K++G+++   +
Sbjct: 60  DRDEL---DFSLEVASAGASAPLTLPRQFKRNVGRQLEVINR----EKRKVVGQLVSADD 112

Query: 141 TGFFLEKEKRGEKDMNELQIAIS------FDSLLSARLIVT 175
               ++ + R  K + + ++ +       +D +  A++++T
Sbjct: 113 ESIAIQWKAREPKPIGKGKVTVEKEWSLKYDDIKQAKVVIT 153


>gi|332878282|ref|ZP_08446008.1| hypothetical protein HMPREF9074_01747 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683733|gb|EGJ56604.1| hypothetical protein HMPREF9074_01747 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 155

 Score = 84.3 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 17/163 (10%)

Query: 19  MGLAGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     + +++   +E         + +  +    + + ++ D+G + + DC  LS+A+ 
Sbjct: 1   MNFKDQVKALVDKALEATPTLFLTDLKVSADNA--ITVVIDGDNG-VGIDDCIALSRAVE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E      + LEV+S G   P V    + +  G  V         D +   G + G
Sbjct: 58  APLDAEG---ADFSLEVTSFGATEPFVLPRQYAKNVGRTVQITTT----DGKVQEGVLKG 110

Query: 138 TSETGFFLEKEKRGEKDMNELQIAI------SFDSLLSARLIV 174
            ++    LE E R  K + + +I +      +   +  A++I+
Sbjct: 111 EADGVVTLETETREPKPVGKGKITVKKEHSFALSDIKEAKVII 153


>gi|218264758|ref|ZP_03478470.1| hypothetical protein PRABACTJOHN_04179 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221807|gb|EEC94457.1| hypothetical protein PRABACTJOHN_04179 [Parabacteroides johnsonii
           DSM 18315]
          Length = 157

 Score = 84.0 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 20/152 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--V 82
           IS +++  +       V + +      L+ I ++ D+G + + DC ELS+ +   LD  V
Sbjct: 9   ISRLVEEKLASSGNYLVDVVIKPGN--LIIIEIDNDEG-VCIDDCAELSRYVEGHLDRDV 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     + LEV S GI  P      +++  G+ V   +        KL G +    E G
Sbjct: 66  ED-----FELEVGSAGITSPFKVLRQYVKNIGNEVEMLLKS----GTKLTGVLKSADENG 116

Query: 143 FFLEKEKRGEKDMNELQIAI------SFDSLL 168
             +  EK+ + +  + ++ +      +FD + 
Sbjct: 117 VVVTVEKQVKPEGAKRKVTVQEDQSYTFDEIK 148


>gi|213865085|ref|ZP_03387204.1| hypothetical protein SentesT_35167 [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
          Length = 57

 Score = 84.0 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 28 VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
          +I   +E + +  V I  +  +   L+I+++ +DG + + DC ++S  +S +LDVE+ 
Sbjct: 1  MITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDG-INVDDCADVSHQVSAVLDVEDP 57


>gi|150003920|ref|YP_001298664.1| hypothetical protein BVU_1353 [Bacteroides vulgatus ATCC 8482]
 gi|212692746|ref|ZP_03300874.1| hypothetical protein BACDOR_02244 [Bacteroides dorei DSM 17855]
 gi|237709442|ref|ZP_04539923.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724958|ref|ZP_04555439.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|254880839|ref|ZP_05253549.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|265754641|ref|ZP_06089693.1| UPF0090 protein [Bacteroides sp. 3_1_33FAA]
 gi|294775076|ref|ZP_06740605.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
 gi|319639849|ref|ZP_07994578.1| ribosome maturation factor rimP [Bacteroides sp. 3_1_40A]
 gi|166977921|sp|A6L028|RIMP_BACV8 RecName: Full=Ribosome maturation factor rimP
 gi|149932344|gb|ABR39042.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|212664682|gb|EEB25254.1| hypothetical protein BACDOR_02244 [Bacteroides dorei DSM 17855]
 gi|229436696|gb|EEO46773.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229456498|gb|EEO62219.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|254833632|gb|EET13941.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|263234755|gb|EEZ20323.1| UPF0090 protein [Bacteroides sp. 3_1_33FAA]
 gi|294451120|gb|EFG19591.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
 gi|317388513|gb|EFV69363.1| ribosome maturation factor rimP [Bacteroides sp. 3_1_40A]
          Length = 155

 Score = 84.0 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E   +  V +++  +  ++++  ++  +G + + DC ELS+ I   LD E 
Sbjct: 7   VTRIVDEWLEGKDYFLVDVTVSPDDKIVVE--IDHAEG-VWIDDCVELSRYIESKLDRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +L   G  V         + +KL G +   +E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYLIHIGKEVEILTK----EGKKLEGVLKDANEENFT 116

Query: 145 LEKEKR------GEKDMNELQIAISFDSLLSARLIVT 175
           +  EK+          + E  I  ++D +   + +++
Sbjct: 117 VTIEKKVKPEGAKRPKLVEEDITFAYDEIKYTKYLIS 153


>gi|258652413|ref|YP_003201569.1| hypothetical protein Namu_2203 [Nakamurella multipartita DSM 44233]
 gi|258555638|gb|ACV78580.1| protein of unknown function DUF150 [Nakamurella multipartita DSM
           44233]
          Length = 173

 Score = 84.0 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            G + +V+  V     +   ++++       +   V   D  ++L D  E+S+ IS  LD
Sbjct: 6   EGRLRAVVTEVTAARGYDLEELAVRSIGRRRVVRVVVDSDDGVSLDDAAEVSREISERLD 65

Query: 82  V-ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             ++ + E  Y LEV+SPG+ RP+     F R  G ++         ++  + G ++  S
Sbjct: 66  GPDDPMGEHPYTLEVTSPGVGRPLREPRHFRRARGRLLVVTT-----EQGPVTGHLLRAS 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +TG  L      +K      + +   ++ +A++ V
Sbjct: 121 DTGIELAL--APDKKGVVTVVELPLTAIATAKVEV 153


>gi|260060677|ref|YP_003193757.1| hypothetical protein RB2501_03740 [Robiginitalea biformata
           HTCC2501]
 gi|88784807|gb|EAR15976.1| hypothetical protein RB2501_03740 [Robiginitalea biformata
           HTCC2501]
          Length = 157

 Score = 84.0 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 65/160 (40%), Gaps = 16/160 (10%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +S ++   +         I L    +  +Q+ ++ D+G ++L+DC ++S+A+   L
Sbjct: 6   LEKRVSELLDEALAGRP-ELFLIDLKVNPDQSIQVTLDGDEG-ISLQDCMDISRAVEHSL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D +     ++ LEV S G   P++    + +  G  +A          +++ G +    +
Sbjct: 64  DRDEF---NFSLEVGSAGATAPLLMPRQYRKHIGRKLAVRRA-----GKEVQGTLTAADD 115

Query: 141 TGFFLEKEKR------GEKDMNELQIAISFDSLLSARLIV 174
               L  + R        K     +  I    +  A++++
Sbjct: 116 KDITLSWKAREPKPVGKGKHTVRKEETIPHSEIEQAKVVL 155


>gi|303235788|ref|ZP_07322395.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
 gi|302484235|gb|EFL47223.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
          Length = 155

 Score = 83.6 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 14/143 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  +++  +E+  +  V I L  +  ++  I ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKKLVEEWLEDKEYFLVDIQLSPDSRIV--IEIDHADG-VWIEDCVELSKFIEEHLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         + +K+ G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVPQQYINFIGKEVEV----LDKEGRKVKGILKSVEGDD 114

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
           F +   ++ + +  +  + +  D
Sbjct: 115 FVVSVNEKVQVEGKKRPVKMDVD 137


>gi|332292193|ref|YP_004430802.1| protein of unknown function DUF150 [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170279|gb|AEE19534.1| protein of unknown function DUF150 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 154

 Score = 83.6 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 74/160 (46%), Gaps = 15/160 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +++++Q  ++E       ISL  + N  ++I ++ D G +T+ DC  +S+ +   L
Sbjct: 2   LKEKVTNLLQEALDENP-SLFLISLDIQGNNEVKIIIDGDSG-VTVEDCMAVSRKVEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E   E  + LEV S G   P+     + +  G  +  +      D +K+ G +   ++
Sbjct: 60  DRE---EEDFSLEVMSAGATSPLEIPRQYKKNIGRHLEVKT----QDGEKIEGLMTEATD 112

Query: 141 TGFFLEKEKRGEKDMNELQIAI------SFDSLLSARLIV 174
               L  + R  K + + ++ +       ++ ++ A++++
Sbjct: 113 AEITLTWKTREPKPVGKGKVTVEKIETFPYNEIVQAKVMI 152


>gi|305665254|ref|YP_003861541.1| hypothetical protein FB2170_03110 [Maribacter sp. HTCC2170]
 gi|88710007|gb|EAR02239.1| hypothetical protein FB2170_03110 [Maribacter sp. HTCC2170]
          Length = 153

 Score = 83.6 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 71/161 (44%), Gaps = 18/161 (11%)

Query: 21  LAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   + S++ + + ++ S   +        +  + + ++ D+G ++++DC ++S+ I   
Sbjct: 2   LKDKVKSLLNEALSQDESLFLID--FTMGADNSINVVLDGDNG-VSVQDCMKVSRGIEHN 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E   E  + L V+S G   PMV    + +  G  V  + + +        G +   S
Sbjct: 59  LDRE---EEDFSLTVTSAGAASPMVNPRQYQKNIGRKVKVQTLENV-----YEGNLTAAS 110

Query: 140 ETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
             G  LE + R  K + + +        I+F  +  A++I+
Sbjct: 111 TNGIVLEWKAREPKPIGKGKTTVQKKKEITFSDIKEAKVIL 151


>gi|325280550|ref|YP_004253092.1| Ribosome maturation factor rimP [Odoribacter splanchnicus DSM
           20712]
 gi|324312359|gb|ADY32912.1| Ribosome maturation factor rimP [Odoribacter splanchnicus DSM
           20712]
          Length = 153

 Score = 83.2 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 72/158 (45%), Gaps = 20/158 (12%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL- 80
             +I  +I+PV+ E     V++ + ++   ++++FV+  +G + ++ C  +S+ I   L 
Sbjct: 3   TEEIKHLIEPVLTEHHLFLVELKISKDN--VIEVFVDALEG-VNIQTCIAVSREIESSLN 59

Query: 81  -DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            D E+     + L VSS G+  P   +  + +  G  V  ++     D  KL G ++  +
Sbjct: 60  RDEED-----FELTVSSAGLGYPFKVEQQYQKNLGKSVEIKL----NDHTKLNGILLRFT 110

Query: 140 ETGFFLEKEKR------GEKDMNELQIAISFDSLLSAR 171
                +E+E++        K + + +  I  + +   +
Sbjct: 111 PEEIVIEQEEKKIIEGSKRKQLVKTERTIVRNDIKEIK 148


>gi|227549049|ref|ZP_03979098.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078903|gb|EEI16866.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 220

 Score = 83.2 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 22/167 (13%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
             +++ +I+P+         ++  +   K   + I ++ D    TL + E +S  +S + 
Sbjct: 48  VDELTRLIEPIAAAHGMDVEKVRTVAAGKKSQVVIALDSDAHP-TLDELEAVSNELSELF 106

Query: 81  DVE----NIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-GK 134
           D      +I  G  Y LEV++PG+D P+     + R  G +V          ++K   G 
Sbjct: 107 DARENAGDINFGAGYTLEVTTPGVDLPLTEPRHWRRNRGRLVTV-------GEEKFRIGA 159

Query: 135 IMGTSETGFFLEKEKRGEK-------DMNELQIAISFDSLLSARLIV 174
           +    E    +  E +  +        +    + I F++  SA+L +
Sbjct: 160 LDAAEEHVVLIATETKSPRAEVRPVSGLGPAVVEIEFNTPPSAQLQL 206


>gi|108799046|ref|YP_639243.1| hypothetical protein Mmcs_2079 [Mycobacterium sp. MCS]
 gi|119868161|ref|YP_938113.1| hypothetical protein Mkms_2125 [Mycobacterium sp. KMS]
 gi|126434649|ref|YP_001070340.1| hypothetical protein Mjls_2062 [Mycobacterium sp. JLS]
 gi|123070305|sp|Q1BA97|RIMP_MYCSS RecName: Full=Ribosome maturation factor rimP
 gi|259585794|sp|A3PY72|RIMP_MYCSJ RecName: Full=Ribosome maturation factor rimP
 gi|259585795|sp|A1UER5|RIMP_MYCSK RecName: Full=Ribosome maturation factor rimP
 gi|108769465|gb|ABG08187.1| protein of unknown function DUF150 [Mycobacterium sp. MCS]
 gi|119694250|gb|ABL91323.1| protein of unknown function DUF150 [Mycobacterium sp. KMS]
 gi|126234449|gb|ABN97849.1| protein of unknown function DUF150 [Mycobacterium sp. JLS]
          Length = 192

 Score = 83.2 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 13/156 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++        +    + +    +   + + V+ D   + L     LS++ S  LD
Sbjct: 16  EQVKELLDGEFARAGYEIENVVIDGGARPPRITVVVDGDR-PLDLDTVASLSRSASEQLD 74

Query: 82  VEN-------IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
             +            Y LEV+SPG+DRP+  +  + R  G  V   +     D  +L G+
Sbjct: 75  RVDESGPGVTADAATYVLEVTSPGVDRPLTTEKHYRRARGRKVELTLS----DGSQLTGR 130

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           I   +  G  +    R     N     +  + ++ A
Sbjct: 131 IGALTADGESVSLVVREGARANFSVRELPLEGIVKA 166


>gi|213964632|ref|ZP_03392832.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
 gi|213952825|gb|EEB64207.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
          Length = 190

 Score = 82.8 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             I   + P + ++      + ++       + + ++ D+    L   E+ +  +S  LD
Sbjct: 7   EKIEQFVSPALAQIGLDVEDVKVVRAGAKSQVIVLIDADERP-DLDVLEQATHEVSSALD 65

Query: 82  ------VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
                   +     Y LEVS+PGID P+ +   + R  G +    +     D   +  +I
Sbjct: 66  AAEARGEADFGAQGYTLEVSTPGIDAPLTQPRHWRRNRGRIAEISL----ADGSAIAARI 121

Query: 136 --MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
             +   E    L   K  +  +  +   +   ++  A
Sbjct: 122 GALSPDEESIILVTSKGPKGRLKAVGQRVQLTNVARA 158


>gi|111023600|ref|YP_706572.1| hypothetical protein RHA1_ro06641 [Rhodococcus jostii RHA1]
 gi|123339654|sp|Q0S222|RIMP_RHOSR RecName: Full=Ribosome maturation factor rimP
 gi|110823130|gb|ABG98414.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 190

 Score = 82.8 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 66/150 (44%), Gaps = 12/150 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++ +I  +++   +    +++ L  ++  ++I V+ D G + L     LS  IS + D
Sbjct: 7   ERVTELISDLVQRQGYDLEDVAVTLAGRHSAVRIMVDSDAG-LELDAVANLSHEISEVFD 65

Query: 82  -VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            V +  E  Y LEV+SPGI RP+  +  + R  G     ++       + ++G+I     
Sbjct: 66  SVSDFGESPYTLEVTSPGIGRPLTHERHWRRARGRRARIDLAH-----ETVVGRIGLLDG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               +    R   ++   ++A+    +  A
Sbjct: 121 DSVAVVIGSRTGPEVR--RVALP--DIQKA 146


>gi|282881116|ref|ZP_06289803.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304920|gb|EFA96993.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
          Length = 155

 Score = 82.8 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 20/159 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           + +V++  +++  +  V I +  +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKAVVEEWLQDKEYFLVDIEVSPDDKIVVE--IDHVDG-VWIEDCVELSRYIESRLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         D +K+ G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVPQQYINFIGKEVEV----LDRDGKKVQGTLKSVDGND 114

Query: 143 FF------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           F       ++ E +   ++  +  A   D +   + +++
Sbjct: 115 FVVAVDEKVKIEGKKRPEIQSVDHAFQMDQVKYTKYLIS 153


>gi|304383856|ref|ZP_07366313.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
 gi|304334934|gb|EFM01207.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
          Length = 155

 Score = 82.8 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 62/144 (43%), Gaps = 14/144 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           + + ++  +++  +  V I +  +  ++++  ++  DG + + DC  LS+ I   L  D 
Sbjct: 7   VKAFVEEWLQDKEYFLVDIEISSDNRIVVE--IDHADG-VWIEDCAALSRFIEEHLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         +  K  G +   +   
Sbjct: 64  ED-----YELEVGSAGLGQPFKVAQQYINFIGKEVEV----LDTEGMKYTGILKHVTGND 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDS 166
           F +   ++ +++  +  I +  D 
Sbjct: 115 FVITVREKQKQEGKKRPIWVDVDK 138


>gi|111225122|ref|YP_715916.1| hypothetical protein FRAAL5763 [Frankia alni ACN14a]
 gi|111152654|emb|CAJ64395.1| Hypothetical protein FRAAL5763 [Frankia alni ACN14a]
          Length = 197

 Score = 82.8 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 61  DGNMTLRDCEELSQAISPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           DG + L    E S+ +S +LD      E +  G Y LEV+SPG+DRP+     + R  G 
Sbjct: 4   DGGIDLDAVAEASRVVSDLLDAAEAAGEGLSAGPYVLEVTSPGVDRPLTAPRHWRRAVGR 63

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           +V           + L G+++   E G  L
Sbjct: 64  LVTVR----DSAGEVLSGRVLSADEAGADL 89


>gi|145224622|ref|YP_001135300.1| hypothetical protein Mflv_4042 [Mycobacterium gilvum PYR-GCK]
 gi|315444954|ref|YP_004077833.1| hypothetical protein Mspyr1_33870 [Mycobacterium sp. Spyr1]
 gi|259585792|sp|A4TCF3|RIMP_MYCGI RecName: Full=Ribosome maturation factor rimP
 gi|145217108|gb|ABP46512.1| protein of unknown function DUF150 [Mycobacterium gilvum PYR-GCK]
 gi|315263257|gb|ADT99998.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
          Length = 178

 Score = 82.4 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 9/147 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++        +    + +         + +   D  + L    ELS+  S  LD  
Sbjct: 17  QVVELLDGEFARAGYDIEDVVIDAATRPPRIVVIADGDRGLDLDAVAELSRLASEQLDTL 76

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +     Y LEV+SPG+DRP+  +  + R  G +    +     D   L G+I        
Sbjct: 77  D--TPPYVLEVTSPGVDRPLTEEKHYRRAQGRLAEVTL----ADGSTLTGRIGAVQNATV 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            L      E   N     I+ D+++ A
Sbjct: 131 ALVVR---EARSNLTVRDIALDAVVKA 154


>gi|281422607|ref|ZP_06253606.1| conserved hypothetical protein [Prevotella copri DSM 18205]
 gi|281403277|gb|EFB33957.1| conserved hypothetical protein [Prevotella copri DSM 18205]
          Length = 155

 Score = 82.4 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 63/145 (43%), Gaps = 14/145 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  +++  +++  +  V I +  +  ++++  ++  DG + + DC  LS+ I   L  D 
Sbjct: 7   VKKLVEEWLQDKEYFLVSIEISPDDRIVVE--IDHADG-VWIEDCVALSKYIEDHLNRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         D +K+ G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVPQQYINFIGKEVEV----LDADGKKVKGILKAVEGND 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSL 167
           F +  E++ + +  +  +    D +
Sbjct: 115 FTVGVEEKVKVEGKKRPVKQEVDHV 139


>gi|256820093|ref|YP_003141372.1| hypothetical protein Coch_1263 [Capnocytophaga ochracea DSM 7271]
 gi|256581676|gb|ACU92811.1| protein of unknown function DUF150 [Capnocytophaga ochracea DSM
           7271]
          Length = 155

 Score = 82.0 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 15/162 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M     +  ++   + E         L    +  +++ ++ D G + + DC ELS+AI  
Sbjct: 1   MNFKDQVKELVNKALSEHP-ELFLTDLSVGTDNTIRVTIDGDKG-VGIDDCIELSRAIEN 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E      + LEV+S G   P V +  + +  G  V    +    D +   G + G 
Sbjct: 59  SLDRE---AMDFALEVTSFGATEPFVMERQYAKNAGRTVQITTL----DGKTHEGLLKGI 111

Query: 139 SETGFFLEKEKRGEKDMNELQIAI------SFDSLLSARLIV 174
           +E    +E E R  K + + +I +      +   +   ++I+
Sbjct: 112 AEGNVIIETETREPKPVGKGKITVKKEHLFALTDIKETKIII 153


>gi|149370940|ref|ZP_01890535.1| hypothetical protein SCB49_04625 [unidentified eubacterium SCB49]
 gi|149355726|gb|EDM44284.1| hypothetical protein SCB49_04625 [unidentified eubacterium SCB49]
          Length = 153

 Score = 82.0 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 71/161 (44%), Gaps = 18/161 (11%)

Query: 21  LAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++  ++   ++E  S   + + +  +    +++ ++ DDG + + DC  +S+A+   
Sbjct: 1   MREEVEKLLDKALKENPSLFLIDLEVTADNQ--IRVTIDGDDG-VKVEDCIAVSRAVEHN 57

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E      + ++V S G   P+  +  +++  G  V  +        +K+   ++   
Sbjct: 58  LDEEL----DFSIDVMSCGASEPLTMQRQYVKNVGRNVLVKT----DKGEKIEATLVAAD 109

Query: 140 ETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARLIV 174
           E    L  + R  K + + ++       I ++ ++  ++++
Sbjct: 110 EENITLNWKAREPKPVGKGKVTVKKEAVIPYNEIVQTKVMI 150


>gi|325856505|ref|ZP_08172194.1| hypothetical protein HMPREF9303_1606 [Prevotella denticola CRIS
           18C-A]
 gi|325483474|gb|EGC86447.1| hypothetical protein HMPREF9303_1606 [Prevotella denticola CRIS
           18C-A]
          Length = 155

 Score = 82.0 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 14/143 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           + S++   +E   +  V I +  +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKSLVDEWLEGKEYFLVDIQISPDDKIVVE--IDHADG-VWIEDCVELSRYIEDRLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      +  + G  V         D +K+ G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVPQQYQNFIGKEVEV----LDKDGKKVKGVLKSVDGND 114

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
           F +   ++   +  +  + +  D
Sbjct: 115 FVVAVNEKVHVEGKKRPVKMDVD 137


>gi|224025209|ref|ZP_03643575.1| hypothetical protein BACCOPRO_01943 [Bacteroides coprophilus DSM
           18228]
 gi|224018445|gb|EEF76443.1| hypothetical protein BACCOPRO_01943 [Bacteroides coprophilus DSM
           18228]
          Length = 155

 Score = 82.0 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 16/159 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            +I+ V+   +E+  +  V + +  +  ++++  ++  DG + + DC  LS+ +   L  
Sbjct: 5   QEITDVVNKWLEDKEYFLVDVQISADSRIVVE--IDHRDG-VWIDDCVNLSRYLEETLGE 61

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
                G Y LEV S G+ +P      +    G  V         D +KL G +   SE G
Sbjct: 62  R---LGDYELEVGSAGLGQPFKVLRQYEAHVGSSVEVCTK----DGRKLHGVLQSASEEG 114

Query: 143 FFLEKEKRGEKDMN------ELQIAISFDSLLSARLIVT 175
           F L  E R   +        E ++  ++D +   + +++
Sbjct: 115 FTLLTEVRERPEGAKRPRWVEHELHFTYDEIKYTKYLIS 153


>gi|327313034|ref|YP_004328471.1| hypothetical protein HMPREF9137_0747 [Prevotella denticola F0289]
 gi|326946205|gb|AEA22090.1| conserved hypothetical protein [Prevotella denticola F0289]
          Length = 155

 Score = 82.0 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 14/143 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           + S++   +E   +  V I +  +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKSLVDEWLEGKEYFLVDIQISPDDKIVVE--IDHADG-VWIEDCVELSRYIEDRLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      +  + G  V         D +K+ G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVPQQYQNFIGKEVEV----LDKDGKKVKGVLKSVDGND 114

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
           F +   ++   +  +  + +  D
Sbjct: 115 FVVAVNEKVHVEGKKRPVKMDVD 137


>gi|198277416|ref|ZP_03209947.1| hypothetical protein BACPLE_03630 [Bacteroides plebeius DSM 17135]
 gi|198269914|gb|EDY94184.1| hypothetical protein BACPLE_03630 [Bacteroides plebeius DSM 17135]
          Length = 155

 Score = 81.3 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 69/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +++  +E+ S+  V +++  +  ++++  ++  +G + + DC ELS+ I   L  E 
Sbjct: 7   VARIVEEWLEDKSYFLVDVNVSPDDKIVVE--IDHAEG-VWIDDCVELSRYIESKLSRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      ++   G  V           +K  G +   +E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYVAHVGCEVEV----LDKTGKKWTGVLADANEENFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 ++ E      + E  +  ++D +   + +++
Sbjct: 117 VTVEVKIKPEGAKRPKLVEQNVTFTYDEIKYTKYLIS 153


>gi|317968932|ref|ZP_07970322.1| hypothetical protein SCB02_05303 [Synechococcus sp. CB0205]
          Length = 122

 Score = 81.3 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 9/115 (7%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
           D G+++L +C   S  +   ++   +++  Y LEVSSPG+   +    DF  + G  V+ 
Sbjct: 11  DGGDVSLDNCASFSGVLGDAIENSGLLQDPYVLEVSSPGVSEQLSDDRDFRSFRGFPVSI 70

Query: 120 EIVL-SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 SG   +  G ++   E    L    R         + I    ++S +L+
Sbjct: 71  RYRDTKSGGDNEREGLLLERDEENVLLNVRGR--------TVRIPRPDVISVKLV 117


>gi|163786552|ref|ZP_02181000.1| hypothetical protein FBALC1_15242 [Flavobacteriales bacterium
           ALC-1]
 gi|159878412|gb|EDP72468.1| hypothetical protein FBALC1_15242 [Flavobacteriales bacterium
           ALC-1]
          Length = 154

 Score = 80.9 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 15/154 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++Q  ++E       I      +  ++I ++ D+G + + DC  +S+AI   +D + 
Sbjct: 6   VEDLLQNALDERQ-DLFLIDFTLSGDNAIKIVIDGDNG-VLVEDCMYISRAIEHNIDRD- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  + LEV S G   P+     + +  G  +  +      D Q L GK++  +E G  
Sbjct: 63  --EHDFSLEVLSSGATTPLTLPRQYKKHIGRDLEVKT----NDSQSLEGKLIDVNEQGVV 116

Query: 145 LEKEKRGEKDMNELQIA------ISFDSLLSARL 172
           L  + R  K + + ++       ++F+++  A++
Sbjct: 117 LTWKAREPKPVGKGKVTVTKEANVTFENIKEAKV 150


>gi|282859023|ref|ZP_06268159.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
 gi|282588191|gb|EFB93360.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
          Length = 155

 Score = 80.9 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 14/143 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  ++   +E+  +  V I +  +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKKLVDEWLEDKDYFLVDIQISSDDKIVVE--IDHADG-VWIEDCVELSKYIEEHLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            +     Y LEV S G+ +P      +  + G  V         D +K+ G +       
Sbjct: 64  AD-----YELEVGSAGLGQPFKVPQQYENFVGKEVEV----LDKDGKKIKGILKSVDGDN 114

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
           F +   ++ + +  +  I +  D
Sbjct: 115 FIVAVNEKVQVEGKKRPIKMDVD 137


>gi|332520008|ref|ZP_08396472.1| protein of unknown function DUF150 [Lacinutrix algicola 5H-3-7-4]
 gi|332044567|gb|EGI80761.1| protein of unknown function DUF150 [Lacinutrix algicola 5H-3-7-4]
          Length = 153

 Score = 80.5 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 69/155 (44%), Gaps = 18/155 (11%)

Query: 25  ISSVIQPVIEE-MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++I   +EE      + +++    +  + + ++ D+G +T+ DC  +S+A+   LD E
Sbjct: 6   VKNLINEALEERADLFLIDLTI--GGDNAINVIIDGDNG-VTVEDCILISRAVEHNLDRE 62

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
              E  + +EV+S G    +     F +  G  +  +        +     ++   E G 
Sbjct: 63  ---EQDFSIEVASAGAAASLTLPRQFKKNIGRTLEVKTQT-----ETFEANLVSADENGI 114

Query: 144 FLEKEKRGEKDMNELQIA------ISFDSLLSARL 172
            LE + R  K + + ++       I+++ ++ A++
Sbjct: 115 SLEWKAREPKPVGKGKVTVQKQTNIAYNDIVEAKV 149


>gi|330836561|ref|YP_004411202.1| Ribosome maturation factor rimP [Spirochaeta coccoides DSM 17374]
 gi|329748464|gb|AEC01820.1| Ribosome maturation factor rimP [Spirochaeta coccoides DSM 17374]
          Length = 166

 Score = 80.5 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 66/153 (43%), Gaps = 5/153 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           ++ +I   + P++  +    V +   + +    + + ++      ++ DC ++ + ++  
Sbjct: 7   VSNEIYKELNPLVRSLGLDIVSVSRNVRQGASSVFLVIKASGRPTSVDDCAKVHRLVASR 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L++    +    LEVS+PG+ R      +F  + G  V       S ++Q + G I   S
Sbjct: 67  LEML-WQDRELSLEVSTPGLQRNFSDVQEFSLFTGDRVRI---FDSQEEQWISGIIDEVS 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  L +      +    ++ I +D +  A+L
Sbjct: 123 DAGVILTQVVGETAEPLAERMNIPYDRIKKAKL 155


>gi|254821856|ref|ZP_05226857.1| hypothetical protein MintA_18122 [Mycobacterium intracellulare ATCC
           13950]
          Length = 170

 Score = 80.5 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 53/148 (35%), Gaps = 8/148 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  ++        +    + +           +   D  + L     LS++ S +LD 
Sbjct: 9   TQVIELLDAEFARAGYEIEDVVIDARTRPPRITVIADGDDGLDLDTAATLSRSASALLDD 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I  HY LEVSS G+DRP+     F R  G  V   +     D   L G+I  T+E  
Sbjct: 69  LDTIGDHYVLEVSSRGVDRPLTSAKHFRRARGRKVDLTLS----DGSTLTGRIGETNEDA 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSA 170
             L          +     IS   ++ A
Sbjct: 125 VALVV----RTGRDWAIREISLGDVVKA 148


>gi|281424956|ref|ZP_06255869.1| conserved hypothetical protein [Prevotella oris F0302]
 gi|281400800|gb|EFB31631.1| conserved hypothetical protein [Prevotella oris F0302]
          Length = 155

 Score = 80.5 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 64/159 (40%), Gaps = 20/159 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  ++   + +  +  V I +  +  ++++  ++  DG + + DC  LS+ I   L  D 
Sbjct: 7   VKKLVDEWLADKEYFLVGIDISPDDKIVVE--IDHADG-VWIEDCVALSKYIEDRLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         D +K  G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVMQQYVNFIGKEVEV----MDADGKKFQGVLKSVDGND 114

Query: 143 FF------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           F       ++ E +      ++  A   D++   + +++
Sbjct: 115 FTVTVNEKVKVEGKKRPQKMDVDHAFKMDNVKYTKYLIS 153


>gi|288801647|ref|ZP_06407089.1| conserved hypothetical protein [Prevotella melaninogenica D18]
 gi|302344942|ref|YP_003813295.1| hypothetical protein HMPREF0659_A5169 [Prevotella melaninogenica
           ATCC 25845]
 gi|288335689|gb|EFC74122.1| conserved hypothetical protein [Prevotella melaninogenica D18]
 gi|302149852|gb|ADK96114.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 155

 Score = 80.5 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 14/143 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           + S++   +E   +  V I +  +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKSLVDEWLEGKEYFLVDIQISSDDKIVVE--IDHADG-VWIEDCVELSKYIEDRLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      +  + G  V         D +K+ G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVPQQYQNFIGKEVEV----LGKDGKKVKGILKSVDGND 114

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
           F +   ++ + +  +  + +  D
Sbjct: 115 FVVAVNEKVQVEGKKRPVKMDVD 137


>gi|300774924|ref|ZP_07084787.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300506739|gb|EFK37874.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 155

 Score = 80.1 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 68/163 (41%), Gaps = 17/163 (10%)

Query: 19  MGLAGDISSVIQPVIE-EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     I  ++   +E       + + +    +  + + ++ D+G ++L+DC + S+AI 
Sbjct: 1   MEFRKRIEELLNEFLETRKDLFLIDLKISAGDD--ITVILDGDNG-VSLQDCLDASRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E   E  + L+V S G+  P+     F +  G  +   +     D  K+ G++  
Sbjct: 58  FNMDRE---EHDFSLQVMSAGLSEPLSTPRQFSKNIGREIEVML----EDSSKIEGELSK 110

Query: 138 TSETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
             +    L    R  KD+ + ++       I +  +  A +++
Sbjct: 111 VDDEKITLVLRYRKPKDIGKGKVDVEEEKEIPYSEIKKALVVI 153


>gi|298206856|ref|YP_003715035.1| hypothetical protein CA2559_01345 [Croceibacter atlanticus
           HTCC2559]
 gi|83849490|gb|EAP87358.1| hypothetical protein CA2559_01345 [Croceibacter atlanticus
           HTCC2559]
          Length = 153

 Score = 80.1 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 72/160 (45%), Gaps = 16/160 (10%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +  ++Q V+++       I      +  + I ++ D+G +T+ DC  +S+AI   L
Sbjct: 2   LKEKVDKLLQAVLDDNP-SLFLIDYNITNDNSIGILIDGDNG-VTVEDCITVSRAIEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E   E  + LEV S G    +     +++  G V++ +      + +K+  +++   +
Sbjct: 60  DRE---EEDFSLEVGSIGATASLTLPRQYVKNIGRVLSVKT-----ETEKIEAELVSADD 111

Query: 141 TGFFLEKEKR------GEKDMNELQIAISFDSLLSARLIV 174
               L+ + R        K   E +  I ++ ++ A++++
Sbjct: 112 NEIALKWKAREPKPVGKGKHTVEKEAVIPYEKIVEAKVMI 151


>gi|123969227|ref|YP_001010085.1| hypothetical protein A9601_16951 [Prochlorococcus marinus str.
           AS9601]
 gi|166980197|sp|A2BT67|RIMP_PROMS RecName: Full=Ribosome maturation factor rimP
 gi|123199337|gb|ABM70978.1| DUF150 [Prochlorococcus marinus str. AS9601]
          Length = 155

 Score = 80.1 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 68/149 (45%), Gaps = 2/149 (1%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGN-MTLRDCEELSQAISPIL 80
             + ++++ V  E       +++   +N ++ +I + + +G+ ++L DC   +   S  +
Sbjct: 7   SKLEALLEKVANERDLEICGLNIQTNQNPVVIEITIRKTNGDDISLDDCALFNTPASDEI 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +  N++   Y LE+SS G+   +  + DF  + G  V  E+   +   + L G +   S+
Sbjct: 67  EKSNLLNCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSKIKILNGLLYEKSK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLS 169
               +  + + +K   +  + IS  +L  
Sbjct: 127 DYLAINIKGKIKKIPFDEVLKISLCTLKD 155


>gi|213962899|ref|ZP_03391159.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
 gi|213954556|gb|EEB65878.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
          Length = 155

 Score = 79.7 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 15/162 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M     +  ++   +           L    +  ++I ++ D G + + DC ELS+A+  
Sbjct: 1   MNFKDQVKELVDKALSNHP-ELFLTDLTVGTDNTIRITIDGDKG-VCIDDCIELSRAVEG 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E +    + LEV+S G   P V +  + +  G  V    +    D +   G + G 
Sbjct: 59  ALDRETV---DFALEVTSFGATEPFVMERQYTKNAGRTVQITTL----DGKTHEGVLKGL 111

Query: 139 SETGFFLEKEKRGEKDMNELQIAI------SFDSLLSARLIV 174
            E    LE E R  K + + +I +      +   +   ++I+
Sbjct: 112 QEGKAVLETETREPKPVGKGKITVKKEQLFALTDIKETKVII 153


>gi|260591779|ref|ZP_05857237.1| conserved hypothetical protein [Prevotella veroralis F0319]
 gi|260536063|gb|EEX18680.1| conserved hypothetical protein [Prevotella veroralis F0319]
          Length = 155

 Score = 79.7 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 14/143 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           + S++   +E   +  V I +  +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKSLVDEWLEGKEYFLVDIQISPDDKIVVE--IDHADG-VWIEDCVELSKYIEDRLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      +  + G  V         D +K+ G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVPQQYQNFIGKEVEV----LDKDGKKVKGVLKSVDGND 114

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
           F +   ++ + +  +  + +  D
Sbjct: 115 FIVAVNEKVQVEGKKRPVKMDVD 137


>gi|78189425|ref|YP_379763.1| hypothetical protein Cag_1464 [Chlorobium chlorochromatii CaD3]
 gi|91208007|sp|Q3AQK5|RIMP_CHLCH RecName: Full=Ribosome maturation factor rimP
 gi|78171624|gb|ABB28720.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
          Length = 179

 Score = 79.7 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 16/151 (10%)

Query: 35  EMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVEN-IIEGHYRL 92
                 V ++L        L++ V+ D G + +  C  +S+ I   L+ ++  +     +
Sbjct: 24  AEGVYVVSVALKGRAGQQKLEVLVDSDKG-IAVEQCAWVSRRILEKLEEDDEPLSEEIAI 82

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS----------ETG 142
           EVSSPG+  P+     + R  G ++        G + ++ G +              ++ 
Sbjct: 83  EVSSPGLGTPLQLPRQYYRHLGKLLHVRYRTPEGAEAEIEGYLQEAQLDGVNGGDSADSV 142

Query: 143 FFLEKEKRGEKDMNE---LQIAISFDSLLSA 170
             L+ + +G++  N      I +    ++ A
Sbjct: 143 IVLKPKVQGKRPRNAQPLENIRLPLSRIIKA 173


>gi|240146878|ref|ZP_04745479.1| protein associated with NUS operon [Roseburia intestinalis L1-82]
 gi|257200976|gb|EEU99260.1| protein associated with NUS operon [Roseburia intestinalis L1-82]
          Length = 74

 Score = 79.7 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 22 AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +I P+++ M+F  V +  ++E     L+ +++++ G +T+ DCE +++ ++ IL
Sbjct: 8  ETRTEELITPILDRMNFELVDVEYVKEGGAWYLRAYIDKE-GGITVNDCEAVAREMNEIL 66

Query: 81 DVENIIEG 88
          D E+ +E 
Sbjct: 67 DREDFVED 74


>gi|72382860|ref|YP_292215.1| hypothetical protein PMN2A_1022 [Prochlorococcus marinus str.
           NATL2A]
 gi|72002710|gb|AAZ58512.1| conserved hypothetical protein [Prochlorococcus marinus str.
           NATL2A]
          Length = 183

 Score = 79.7 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 11/155 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVE--RDDGNMTLRDCEELSQAISP 78
             ++  +         F      +    N L +Q+ +     D  +T+ DC  LSQ I  
Sbjct: 33  VSELKVLTAKSATNYGFDVTDFKMFTHLNPLSIQVNIRHKNPDKKVTIDDCSILSQYIDE 92

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +   +I++  + LE+SS GI   +  + DF  + G  V          +Q++ G ++  
Sbjct: 93  AIQGSSILDQPFNLEISSEGIGDFLTEEKDFQTFKGFPVEVSYQDLKKIEQQINGLLLKR 152

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++    + ++ + ++        I  + ++  RL 
Sbjct: 153 TDNELHINQKGKTQR--------IPVEDVIQVRLA 179


>gi|300727484|ref|ZP_07060875.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299775187|gb|EFI71788.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 155

 Score = 79.7 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 65/157 (41%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E+  +  V I +  +  ++++  ++  DG + + DC ELS+ +   LD + 
Sbjct: 7   VKKLVDEWLEDKEYFLVDIQISPDDKIVVE--IDHADG-VWIEDCAELSRFVQEHLDRD- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF- 143
             +  Y LEV S G+ +P      ++   G  V           +K+ G +       F 
Sbjct: 63  --QEDYELEVGSAGVGQPFKVAQQYVNNIGKEVEV----LDNTGKKIKGILKSVDGNNFV 116

Query: 144 -----FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 ++ E +    + ++  A   D +   + +++
Sbjct: 117 VSVSEKVKVEGKKRPVLQDVDYAFLMDQVKYTKYVIS 153


>gi|288925327|ref|ZP_06419261.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|315606723|ref|ZP_07881733.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|288337798|gb|EFC76150.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|315251578|gb|EFU31557.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 155

 Score = 79.7 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 64/138 (46%), Gaps = 14/138 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           + ++++  +++  +  V I + ++  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKTLVEEWLQDKEYFLVDIQIGQDDKIVVE--IDHADG-VWIEDCVELSKYIEDRLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V        GD +K+ G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVAQQYINFIGKEVEV----LDGDGKKVKGLLKSVDGND 114

Query: 143 FFLEKEKRGEKDMNELQI 160
           F +   ++ + +  +  +
Sbjct: 115 FVVSVNEKVKVEGKKRPV 132


>gi|307565720|ref|ZP_07628189.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
 gi|307345546|gb|EFN90914.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
          Length = 155

 Score = 79.3 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 59/143 (41%), Gaps = 14/143 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  ++   +E   +  V I +  E  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKKLVSEWLEGKEYFLVDIQISSENKIVVE--IDHADG-VWIEDCVELSKYIEEHLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            +     Y LEV S G+ +P      ++ + G  V         + +K+ G +       
Sbjct: 64  AD-----YELEVGSAGLGQPFKVAQQYINFIGKEVEV----LDKEGKKVKGLLKSVDGDE 114

Query: 143 FFLEKEKRGEKDMNELQIAISFD 165
           F +   ++   +  +  + +  D
Sbjct: 115 FIVAVNEKVRIEGKKRPVKMDVD 137


>gi|261881034|ref|ZP_06007461.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270332216|gb|EFA43002.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 155

 Score = 79.3 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 10/136 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + ++++  +    +  V I +  + N  + + ++  DG + + DC ELS+ I   LD E 
Sbjct: 7   VKNIVEEWLAGKEYFLVDIKV--DSNDKITVEIDHADG-VYINDCVELSKFIESQLDRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             +  Y LEV S GI +P   +  ++   G  V         D +K+ G +       F 
Sbjct: 63  --QEDYELEVGSAGIGQPFKVEQQYVNHIGKPVEV----LDADGKKVRGVLKSVEGRDFV 116

Query: 145 LEKEKRGEKDMNELQI 160
           +   ++ + +  +  +
Sbjct: 117 VSVNEKVKVEGKKRPV 132


>gi|299142251|ref|ZP_07035384.1| conserved hypothetical protein [Prevotella oris C735]
 gi|298576340|gb|EFI48213.1| conserved hypothetical protein [Prevotella oris C735]
          Length = 155

 Score = 79.3 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 64/159 (40%), Gaps = 20/159 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  ++   + +  +  V I +  +  ++++  ++  DG + + DC  LS+ I   L  D 
Sbjct: 7   VKRLVDEWLADKEYFLVGIDISPDDKIVVE--IDHADG-VWIEDCVALSKYIEDRLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         D +K  G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVVQQYVNFIGKEVEV----MDADGKKFQGVLKSVDGND 114

Query: 143 FF------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           F       ++ E +      ++  A   D++   + +++
Sbjct: 115 FTVTVNEKVKVEGKKRPQKMDVDHAFKMDNVKYTKYLIS 153


>gi|300743964|ref|ZP_07072984.1| conserved hypothetical protein [Rothia dentocariosa M567]
 gi|300380325|gb|EFJ76888.1| conserved hypothetical protein [Rothia dentocariosa M567]
          Length = 221

 Score = 79.3 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 74/160 (46%), Gaps = 13/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG---NMTLRDCEELSQAIS 77
             +++  I+PV+ E S    +I +     N  ++I V+  +    +++L    E+S AIS
Sbjct: 54  EDEVNEAIKPVLSEFSLVLERIKISGPAANRTVEITVDYTEDRTDSLSLDSLAEISGAIS 113

Query: 78  PILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +  +    Y LEVSSPG  R +  +  + R    +VA        D  + + ++
Sbjct: 114 QALDKADKHDEFFPYMLEVSSPGATRELTERRHWKRARTRLVAVT----QTDGTEYVARL 169

Query: 136 MGTSETGFFLEKEKRGEKDMNELQ---IAISFDSLLSARL 172
              ++ G  L ++K+ +K   +     + + ++++  A +
Sbjct: 170 DEITDEGPVLRRKKQTKKGQKQTYHDAVIVPWENIGHANV 209


>gi|163839409|ref|YP_001623814.1| putative cytoplasmic protein [Renibacterium salmoninarum ATCC
           33209]
 gi|162952885|gb|ABY22400.1| hypothetical cytosolic protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 149

 Score = 79.0 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)

Query: 55  IFVERDD---GNMTLRDCEELSQAISPILDVENIIEG--HYRLEVSSPGIDRPMVRKSDF 109
           + V+  +   G++ L    E+S A+S  LD  +  +    + LEVSSPG+ R +     +
Sbjct: 3   VVVDLPEDQQGSVGLDKIAEVSLALSSALDA-DPEDDGRPFDLEVSSPGVGRSLTELRHW 61

Query: 110 LRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIA---ISFDS 166
            R  G +   ++  S    + L G+I+  S  G  +  E   +K M   Q     I F  
Sbjct: 62  RRALGRMATLKLRKSEQG-ESLFGRIIEVSPDGVKIRPELPVKKGMKPKQAEPEFIEFAQ 120

Query: 167 LLS 169
           +  
Sbjct: 121 IRK 123


>gi|153809149|ref|ZP_01961817.1| hypothetical protein BACCAC_03459 [Bacteroides caccae ATCC 43185]
 gi|149128125|gb|EDM19345.1| hypothetical protein BACCAC_03459 [Bacteroides caccae ATCC 43185]
          Length = 155

 Score = 79.0 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRYIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V           QKL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVMTK----GGQKLTGILKDADEEKFT 116

Query: 145 LEKEKR------GEKDMNELQIAISFDSLLSARLIVT 175
           +  +K+          + E     +++ +   + +++
Sbjct: 117 VTVQKKVKLEGSKRPKLVEEDETFTYEQIKYTKYLIS 153


>gi|124026597|ref|YP_001015712.1| hypothetical protein NATL1_18921 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961665|gb|ABM76448.1| DUF150 [Prochlorococcus marinus str. NATL1A]
          Length = 183

 Score = 79.0 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 61/154 (39%), Gaps = 11/154 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVE--RDDGNMTLRDCEELSQAISP 78
             ++  +         F      +    N L +Q+ +     D  +T+ DC  LSQ I  
Sbjct: 33  VSELKDLTAKSATNYGFDVTDFKMFTHLNPLSIQVNIRHKNPDKKVTIDDCSILSQYIDE 92

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +   +I++  + LE+SS GI   +  + DF  + G  V          +Q+  G ++  
Sbjct: 93  AIQGSSILDQPFNLEISSEGISDFLTEEKDFQTFKGFPVEVSYQDLKKIEQQTNGLLLKR 152

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++    + ++ + ++        I  + ++  RL
Sbjct: 153 TDNELQINQKGKTQR--------IPVEDVIQVRL 178


>gi|169630218|ref|YP_001703867.1| hypothetical protein MAB_3136c [Mycobacterium abscessus ATCC 19977]
 gi|259585791|sp|B1MD92|RIMP_MYCA9 RecName: Full=Ribosome maturation factor rimP
 gi|169242185|emb|CAM63213.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 189

 Score = 78.6 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 63/153 (41%), Gaps = 10/153 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL----LEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
              +  ++ P           + +    +  +   + + V+ D   + L     LS+  S
Sbjct: 17  DDQVLELLAPEFSRSGVEIESVVVSDGGVAGRPSRIAVVVDSDT-PVDLDAVAGLSRTAS 75

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD  +     Y LE+++PG+DRP+   + F R +  +    +     + + L+G+I  
Sbjct: 76  ALLDEADTGWQAYELEITTPGVDRPLTTVAHFRRAHLRLAQIRLT----NGEDLLGRIGI 131

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           T + G  +   K  +     ++  ++F  + SA
Sbjct: 132 THDDGVQVVLRKPIKGTGWTVR-DLAFSDIESA 163


>gi|319953581|ref|YP_004164848.1| ribosome maturation factor rimp [Cellulophaga algicola DSM 14237]
 gi|319422241|gb|ADV49350.1| Ribosome maturation factor rimP [Cellulophaga algicola DSM 14237]
          Length = 153

 Score = 78.6 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 16/158 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  +++  ++E       I         + I ++ D G + L+DC  +++AI   LD 
Sbjct: 4   EKVLELLEGALKENE-SIFLIDFTIGPANKISITLDGDTG-VNLKDCIAINRAIESNLDR 61

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E   E  + LEV+S G   PMV    + +  G  +  + +       K  G +   ++ G
Sbjct: 62  E---EEDFSLEVASVGATTPMVMPRQYKKNIGRELEVKTL-----GGKFEGILTEANDQG 113

Query: 143 FFLEKEKRGEKDMNELQIAIS------FDSLLSARLIV 174
             LE + R  K + + ++ +       F  +  A++I+
Sbjct: 114 ITLEWKAREPKPIGKGKVTVQKKQEFIFSDIQEAKVII 151


>gi|126663077|ref|ZP_01734075.1| hypothetical protein FBBAL38_06985 [Flavobacteria bacterium BAL38]
 gi|126624735|gb|EAZ95425.1| hypothetical protein FBBAL38_06985 [Flavobacteria bacterium BAL38]
          Length = 155

 Score = 78.6 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 74/164 (45%), Gaps = 17/164 (10%)

Query: 19  MGLAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  V+   + E      + +S+ E     + + ++ D G + L+DC ++S+A+ 
Sbjct: 1   MTFKNKVQEVLDAALAEREQLFLIDLSINEANK--ISVILDGDSG-VNLQDCIDISRAVE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E   E  + LEV+S G+  P+     + +  G  +  + +      +++  K+  
Sbjct: 58  NNLDRE---EQDFSLEVASAGVSSPLKLVRQYKKNIGRTIKVKTISL----EEIEAKLTM 110

Query: 138 TSETGFFLEKEKR------GEKDMNELQIAISFDSLLSARLIVT 175
             +    LE + R        K+  + ++ +S++++  A +I++
Sbjct: 111 ADDEKITLEWQDREPKKIGKGKETVDKKLQLSYENIKEAIVIIS 154


>gi|86131974|ref|ZP_01050570.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85817308|gb|EAQ38488.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 154

 Score = 78.6 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 74/160 (46%), Gaps = 15/160 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +++++Q  ++E       ISL  + N  ++I ++ DDG + + DC  +S+ +   L
Sbjct: 2   LKEKVTNLLQEALDENP-NLFLISLDIQGNNEIKIIIDGDDG-VKVEDCIAVSRKVEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E   E  + LEV S G   P+     + +  G  +  +      D  K+ G +   ++
Sbjct: 60  DRE---EEDFSLEVMSAGATSPLAIPRQYKKNVGRHLEVK----KEDGTKIEGLMTDATD 112

Query: 141 TGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
           T   L  + R  K + + ++       IS+  ++ A++++
Sbjct: 113 TDVTLTWKTREPKPVGKGKVTVQKTETISYSEIVQAKVMI 152


>gi|315225518|ref|ZP_07867328.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
 gi|314944462|gb|EFS96501.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
          Length = 155

 Score = 78.2 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 15/162 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M     +  ++   + E         L    +  +++ ++ D G + + DC EL++AI  
Sbjct: 1   MNFKDQVKELVNKALSEHP-ELFLTDLSVGADNTIRVTIDGDKG-VGIDDCIELNRAIEN 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E      + LEV+S G   P V +  + +  G  V    +    D +   G + G 
Sbjct: 59  SLDRE---AMDFALEVTSFGATEPFVMERQYAKNAGRTVQVTTL----DGKTHEGVLKGI 111

Query: 139 SETGFFLEKEKRGEKDMNELQIAI------SFDSLLSARLIV 174
            E    LE E R  K + + +I +      +   +   ++I+
Sbjct: 112 VEGKAILETETREPKPVGKGKITVKKEHLFALTDIKETKVII 153


>gi|91207995|sp|Q46J16|RIMP_PROMT RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score = 78.2 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 11/155 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVE--RDDGNMTLRDCEELSQAISP 78
             ++  +         F      +    N L +Q+ +     D  +T+ DC  LSQ I  
Sbjct: 6   VSELKVLTAKSATNYGFDVTDFKMFTHLNPLSIQVNIRHKNPDKKVTIDDCSILSQYIDE 65

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +   +I++  + LE+SS GI   +  + DF  + G  V          +Q++ G ++  
Sbjct: 66  AIQGSSILDQPFNLEISSEGIGDFLTEEKDFQTFKGFPVEVSYQDLKKIEQQINGLLLKR 125

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++    + ++ + ++        I  + ++  RL 
Sbjct: 126 TDNELHINQKGKTQR--------IPVEDVIQVRLA 152


>gi|298374482|ref|ZP_06984440.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
 gi|298268850|gb|EFI10505.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
          Length = 157

 Score = 78.2 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 20/152 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--V 82
           +S +I+  +   S   V + +      L+ + ++ D+  +++ DC ELS+ +   LD  V
Sbjct: 9   VSQLIEEKLASSSNYLVDVVIKPGN--LIVVEIDNDE-AVSIDDCAELSRYLEEHLDRDV 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S GI  P      +++  G+ V   +     +  KL G +    E G
Sbjct: 66  ED-----YELEVGSAGITSPFKVLRQYVKNIGNEVEMLLK----NGSKLTGVLKSADENG 116

Query: 143 FFLEKEKRGEKDMNELQIAI------SFDSLL 168
             +  EK+ + +  + ++ +      +FD + 
Sbjct: 117 VVVSVEKKVKPEGAKRKVTVVEDESYTFDEIK 148


>gi|255692952|ref|ZP_05416627.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
 gi|260621263|gb|EEX44134.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
          Length = 155

 Score = 78.2 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRYIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V           QKL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVMTK----GGQKLTGVLKHADEEKFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 ++ E      + E     +++ +   + +++
Sbjct: 117 VSVQKKVKMEGAKRPKLVEEDETFTYEQIKYTKYLIS 153


>gi|302528543|ref|ZP_07280885.1| UPF0090 protein [Streptomyces sp. AA4]
 gi|302437438|gb|EFL09254.1| UPF0090 protein [Streptomyces sp. AA4]
          Length = 175

 Score = 78.2 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 15/152 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           LA  +  ++   +    F    + + +  +  L+++ V+ DDG + L +  E+S+ +S  
Sbjct: 8   LASRLEPIVAEAVTTAGFDLDSLEVQQAGRRQLVKVVVDSDDG-VGLDEVAEVSRTVSAA 66

Query: 80  LDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           LD  E+++   Y LEV+SPG+DRP+ ++  + R    +V              +G++   
Sbjct: 67  LDENEHVLASAYTLEVTSPGLDRPLTQRRHWRRARFRLVKIT---PVEGSA-YLGRVGHA 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            E    +  + R +         + + S+  A
Sbjct: 123 GEKSVRVLADGRIKD--------VHYQSVAKA 146


>gi|325954922|ref|YP_004238582.1| ribosome maturation factor rimP [Weeksella virosa DSM 16922]
 gi|323437540|gb|ADX68004.1| Ribosome maturation factor rimP [Weeksella virosa DSM 16922]
          Length = 155

 Score = 78.2 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 17/160 (10%)

Query: 22  AGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  +I   IEE      V   +  +  +   I  + D G + + +   +S+ +   L
Sbjct: 3   IAKVKRLIDEAIEENPTLFLVDWKVTPDNKIF--ILADGDQG-LPIEEIVRISRHVEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           + E   E  + LEVSSPG+  P+     + +  G  ++  ++    D + L G+I+  +E
Sbjct: 60  NRE---ECDFALEVSSPGLSTPLSMPRQYKKNIGRQISITLI----DGKVLEGEIVEANE 112

Query: 141 TGFFLEKEKRGEKDMNELQIAIS------FDSLLSARLIV 174
               L  E R  K + + +I +       +D++  A ++V
Sbjct: 113 EAVELFWETREPKPVGKGKITVEHQEEFHYDTIQKAVIVV 152


>gi|256419697|ref|YP_003120350.1| hypothetical protein Cpin_0651 [Chitinophaga pinensis DSM 2588]
 gi|256034605|gb|ACU58149.1| protein of unknown function DUF150 [Chitinophaga pinensis DSM 2588]
          Length = 169

 Score = 78.2 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 73/168 (43%), Gaps = 18/168 (10%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMT 65
           F+ ++       DM      + ++ P  E   +  V + +    N+ L  FV+ D+G + 
Sbjct: 15  FMANEQVITTIRDMA-----AEMLSPYPE---YFVVDVRIKPTNNIKL--FVDGDNG-VP 63

Query: 66  LRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           +      ++ +   L+   +   + + LEVSSPG+D P+     +++  G  V   +   
Sbjct: 64  VDKLVAFNRNLYSRLEEATLFPDNDFSLEVSSPGLDEPLKLLRQYVKNIGRKVTVTL--- 120

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             + +K  G ++  +E    +E++   +K+    +  I+ + +   ++
Sbjct: 121 LDNSEK-EGTLLSATEAVVTIEEQVGKKKEKKTTE--INLNEIKHTKV 165


>gi|311113214|ref|YP_003984436.1| hypothetical protein HMPREF0733_11545 [Rothia dentocariosa ATCC
           17931]
 gi|310944708|gb|ADP41002.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931]
          Length = 221

 Score = 78.2 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVE---RDDGNMTLRDCEELSQAIS 77
             ++   I+PV+ E S    +I +     N  ++I V+       +++L    E+S AIS
Sbjct: 54  EDEVGEAIKPVLSEFSLVLERIKISGPAANRTVEITVDYMEDRTDSLSLDSLAEISGAIS 113

Query: 78  PILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +  +    Y LEVSSPG  R +  +  + R    +VA        D  + + ++
Sbjct: 114 QALDKADEHDEFFPYMLEVSSPGATRELTERRHWKRARTRLVAVT----QTDGTEYVARL 169

Query: 136 MGTSETGFFLEKEKRGEKDMNELQ---IAISFDSLLSARL 172
              ++ G  L ++K+ +K   +     + + ++++  A +
Sbjct: 170 DEITDEGPVLRRKKQTKKGQKQTYHDAVIVPWENIGHANV 209


>gi|227504823|ref|ZP_03934872.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
 gi|227198673|gb|EEI78721.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
          Length = 188

 Score = 78.2 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 17/157 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++QP++E        +   +  K   + I ++ D    +    EE+S  IS   
Sbjct: 6   AAQLTELLQPLLEPRGLDVEDVKTTKAGKKSQVIIRIDGDQRP-SSDVLEEVSNQISEFF 64

Query: 81  DVENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D +           Y LEVS+PG+D P+     + R  G +VA E+       +  + +I
Sbjct: 65  DAKEESGELNFGAGYTLEVSTPGVDLPLTAPRHWRRNRGRLVAFELTP----GKSEVARI 120

Query: 136 MGTSET--GFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              S+      L    + +      +     +++  A
Sbjct: 121 GALSDDASSVALITTVKKDVYFRIER----LENIARA 153


>gi|86742246|ref|YP_482646.1| hypothetical protein Francci3_3565 [Frankia sp. CcI3]
 gi|123750811|sp|Q2J725|RIMP_FRASC RecName: Full=Ribosome maturation factor rimP
 gi|86569108|gb|ABD12917.1| protein of unknown function DUF150 [Frankia sp. CcI3]
          Length = 268

 Score = 78.2 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 12/162 (7%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
           G  G+   + + +   + +  F    +++    +  +   V   DG + L    + S+  
Sbjct: 38  GRGGVRTALRARLAAGLADAGFDLEDVTVTRAGSRSVVRVVVDRDGGVDLDAVADASRLA 97

Query: 77  SPILDVEN-----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           S +LD        ++ G Y LEV+SPG++RP+     + R  G +V             L
Sbjct: 98  SELLDAAETDGQGLVAGPYVLEVTSPGVERPLTEPRHWRRAIGRLVTVRDRDGI----VL 153

Query: 132 IGKIMGTSETGFFL---EKEKRGEKDMNELQIAISFDSLLSA 170
            G+++   E+G  L       R  +        ++F  +  A
Sbjct: 154 AGRVLSADESGADLAVATDPARPGRPPRRRLARVTFAQVARA 195


>gi|116328715|ref|YP_798435.1| hypothetical protein LBL_2089 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330627|ref|YP_800345.1| hypothetical protein LBJ_0944 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281618|sp|Q04U33|RIMP_LEPBJ RecName: Full=Ribosome maturation factor rimP
 gi|122283500|sp|Q04ZJ3|RIMP_LEPBL RecName: Full=Ribosome maturation factor rimP
 gi|116121459|gb|ABJ79502.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124316|gb|ABJ75587.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 162

 Score = 77.8 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 4/121 (3%)

Query: 57  VERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV 116
           +E   G+++L +CE++S+ +   L+  +     + L+VSS G +R +    D  R+ G  
Sbjct: 43  LEHPYGSVSLLECEQVSRKLKEELERISPDLD-FTLKVSSAGAERKLHLPEDIDRFRGIP 101

Query: 117 VACEIVLSSGDKQKLIG--KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           V   +  S   ++   G  +I+       FLEK ++G+K   + Q  ++   +L   L V
Sbjct: 102 VRL-VFRSGESEKNQEGIFRIVNRDGDQVFLEKFQKGKKSAVKKQTTLNLKDILKGNLYV 160

Query: 175 T 175
           +
Sbjct: 161 S 161


>gi|262382601|ref|ZP_06075738.1| UPF0090 protein [Bacteroides sp. 2_1_33B]
 gi|262295479|gb|EEY83410.1| UPF0090 protein [Bacteroides sp. 2_1_33B]
          Length = 157

 Score = 77.8 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 20/152 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--V 82
           +S +++  +   S   V + +      L+ + ++ D+  +++ DC ELS+ +   LD  V
Sbjct: 9   VSQLVEEKLASSSNYLVDVVIKPGN--LIVVEIDNDE-AVSIDDCAELSRYLEEHLDRDV 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S GI  P      +++  G+ V   +     +  KL G +    E G
Sbjct: 66  ED-----YELEVGSAGITSPFKVLRQYVKNIGNEVEMLLK----NGSKLTGVLKSADENG 116

Query: 143 FFLEKEKRGEKDMNELQIAI------SFDSLL 168
             +  EK+ + +  + ++ +      +FD + 
Sbjct: 117 VVVSVEKKVKPEGAKRKVTVIEDESYTFDEIK 148


>gi|259586223|sp|A2C4N8|RIMP_PROM1 RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score = 77.8 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 61/154 (39%), Gaps = 11/154 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVE--RDDGNMTLRDCEELSQAISP 78
             ++  +         F      +    N L +Q+ +     D  +T+ DC  LSQ I  
Sbjct: 6   VSELKDLTAKSATNYGFDVTDFKMFTHLNPLSIQVNIRHKNPDKKVTIDDCSILSQYIDE 65

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +   +I++  + LE+SS GI   +  + DF  + G  V          +Q+  G ++  
Sbjct: 66  AIQGSSILDQPFNLEISSEGISDFLTEEKDFQTFKGFPVEVSYQDLKKIEQQTNGLLLKR 125

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++    + ++ + ++        I  + ++  RL
Sbjct: 126 TDNELQINQKGKTQR--------IPVEDVIQVRL 151


>gi|160883930|ref|ZP_02064933.1| hypothetical protein BACOVA_01904 [Bacteroides ovatus ATCC 8483]
 gi|237720418|ref|ZP_04550899.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260172454|ref|ZP_05758866.1| hypothetical protein BacD2_11366 [Bacteroides sp. D2]
 gi|293370439|ref|ZP_06616992.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|299147095|ref|ZP_07040162.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
 gi|315920748|ref|ZP_07916988.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156110660|gb|EDO12405.1| hypothetical protein BACOVA_01904 [Bacteroides ovatus ATCC 8483]
 gi|229450169|gb|EEO55960.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292634431|gb|EFF52967.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|298514980|gb|EFI38862.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
 gi|313694623|gb|EFS31458.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 155

 Score = 77.4 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRFIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V        GD +KL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVLT----GDGRKLAGILKDADEEKFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 ++ E      + E     +++ +   + +++
Sbjct: 117 VGVQKKVKTEGSKRPKLVEEDETFTYEQIKYTKYLIS 153


>gi|45658542|ref|YP_002628.1| hypothetical protein LIC12707 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|34222882|sp|Q8F7K3|RIMP_LEPIN RecName: Full=Ribosome maturation factor rimP
 gi|51316950|sp|Q72NX1|RIMP_LEPIC RecName: Full=Ribosome maturation factor rimP
 gi|45601785|gb|AAS71265.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 162

 Score = 77.4 bits (190), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 77/159 (48%), Gaps = 9/159 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVER---DDGNMTLRDCEELSQAIS 77
           + +IS ++  V+  +  +   + + +  N  L+++ ++      G+++L +CE++S+ + 
Sbjct: 5   SEEISGILDGVL-SLPVKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLK 63

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG--KI 135
             L+  +     Y L+VSS G +R +    D  R+ G  +   +  S   +++  G  ++
Sbjct: 64  EELERISPDLD-YTLKVSSAGAERKLNLPGDLDRFRGIPIRL-VFRSEESEKEQEGIFRV 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        LEK ++G+K + + Q  ++   +L   L V
Sbjct: 122 VNRDGDQIVLEKFQKGKKSVVKKQTTLNLKDILKGNLYV 160


>gi|298387891|ref|ZP_06997440.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
 gi|298259298|gb|EFI02173.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
          Length = 155

 Score = 77.4 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRFIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V         D +KL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVVTR----DGRKLAGILKDADEEKFT 116

Query: 145 LEKEKRGEKDMNELQIAISFDS 166
           +  EK+ + + ++    I  D 
Sbjct: 117 VGVEKKVKLEGSKRPKLIEEDE 138


>gi|193213434|ref|YP_001999387.1| hypothetical protein Cpar_1795 [Chlorobaculum parvum NCIB 8327]
 gi|259585748|sp|B3QQI4|RIMP_CHLP8 RecName: Full=Ribosome maturation factor rimP
 gi|193086911|gb|ACF12187.1| protein of unknown function DUF150 [Chlorobaculum parvum NCIB 8327]
          Length = 170

 Score = 77.0 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 12/157 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD-- 81
           I   I  V          +   +     ++++ +E D G +++  C +LS+ I   L+  
Sbjct: 9   IDESIAEVAVATGSDIYLVEADVRGGGRIIELTIEADKG-VSIDQCAKLSRTIRARLEAC 67

Query: 82  VENII--EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT- 138
            EN++   G + L VSSPGI  P+     +LR  G  +    + S G+++++ GK+    
Sbjct: 68  EENLMLAAGDFELMVSSPGIGEPIRVSRQYLRHLGRKMKVVYLDSEGERKEIEGKLTEAS 127

Query: 139 ---SETGFFLE--KEKRGEKDMNELQIAISFDSLLSA 170
               E    +E   + + +K      + +    ++ A
Sbjct: 128 LEGEEPSITIEPVVKGKKKKTSGREPLTLRLADVVKA 164


>gi|150010112|ref|YP_001304855.1| hypothetical protein BDI_3532 [Parabacteroides distasonis ATCC
           8503]
 gi|255012628|ref|ZP_05284754.1| hypothetical protein B2_01880 [Bacteroides sp. 2_1_7]
 gi|166990853|sp|A6LHR9|RIMP_PARD8 RecName: Full=Ribosome maturation factor rimP
 gi|149938536|gb|ABR45233.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 155

 Score = 77.0 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 20/152 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--V 82
           +S +I+  +   S   V + +      L+ + ++ D+  +++ DC ELS+ +   LD  V
Sbjct: 7   VSQLIEEKLASSSNYLVDVVIKPGN--LIVVEIDNDE-AVSIDDCAELSRYLEEHLDRDV 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S GI  P      +++  G+ V   +     +  KL G +    E G
Sbjct: 64  ED-----YELEVGSAGITSPFKVLRQYVKNIGNEVEMLLK----NGSKLTGVLKSADENG 114

Query: 143 FFLEKEKRGEKDMNELQIAI------SFDSLL 168
             +  EK+ + +  + ++ +      +FD + 
Sbjct: 115 VVVSVEKKVKPEGAKRKVTVVEDESYTFDEIK 146


>gi|289705160|ref|ZP_06501563.1| conserved hypothetical protein [Micrococcus luteus SK58]
 gi|289558104|gb|EFD51392.1| conserved hypothetical protein [Micrococcus luteus SK58]
          Length = 195

 Score = 77.0 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 16/161 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE----KNLLLQIFVERDDG--NMTLRDCEELSQAI 76
            D++ +   V E ++   V +  +      ++  +++ ++R  G   ++L D   LS  +
Sbjct: 8   DDLAELRTRVEEALAADDVVVEQVRATGTAEHRTVEVVLDRASGTQGLSLDDVARLSGRV 67

Query: 77  SPILD-----VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           S  LD     V  +  G Y LEV++ G+DRP+     F R  G +V             +
Sbjct: 68  SAALDALGDHVPGVGAGEYLLEVTTAGVDRPLTEPRHFARNVGRLVEVS----VDGAAPV 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             ++   +     L   +   K   + +  +  + +   RL
Sbjct: 124 TARLKDVTADDVELAVVRPPAKKGMKAK-ELPAERVALDRL 163


>gi|282879393|ref|ZP_06288136.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|281298506|gb|EFA90932.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 155

 Score = 77.0 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 61/150 (40%), Gaps = 16/150 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +++  +  V + + ++  ++++  ++  DG + + DC ELS+ I       +
Sbjct: 7   VKGLVEDWLQDKDYFLVDVEVSKDDKIVVE--IDHADG-VWIEDCVELSRYIED---RLD 60

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             +  Y LEV S G+ +P      ++ + G  V        GD  K  G +       F 
Sbjct: 61  RDDEDYELEVGSAGLGQPFKVPQQYINFIGKEVEV----LDGDGLKYRGVLKSVDGNDFV 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLL 168
                 ++ E +   ++  +      D + 
Sbjct: 117 VTVDEKVKVEGKKRPELQAVDHTFQMDKVK 146


>gi|255010120|ref|ZP_05282246.1| hypothetical protein Bfra3_13350 [Bacteroides fragilis 3_1_12]
 gi|313147918|ref|ZP_07810111.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136685|gb|EFR54045.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 155

 Score = 77.0 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 68/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRFIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYNHIGLEVEVLTK----GGRKLSGVLKDADEEKFV 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSARLIVT 175
           +  +K+ + +        E     ++D +   + +++
Sbjct: 117 VTVQKKVKPEGAKRPQLVEEDETFTYDDIKYTKYLIS 153


>gi|254494921|ref|ZP_01052530.2| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|213690503|gb|EAQ41958.2| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 176

 Score = 77.0 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 69/157 (43%), Gaps = 18/157 (11%)

Query: 23  GDISSVIQPVIE-EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             I  ++   +    S   + +++ E     +Q+ V+ D+G + L +C  +S+ +   LD
Sbjct: 27  KKIKDLVDEALALNESLFLIDLTISENNK--IQVTVDGDNG-VPLSECIRISRNVEHNLD 83

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            E   E  + LEV++P I  P+  K  +++    ++  +        ++L G ++   + 
Sbjct: 84  RE---EEDFSLEVTTPDISHPLKEKRQYVKNINRILKVKTAE-----EELEGTLVEADDE 135

Query: 142 GFFLEKEKRGEKDMNELQI------AISFDSLLSARL 172
              L  + R  K + + ++       +++  +  A++
Sbjct: 136 KIVLNWKAREPKPIGKGKVTVKKSATLTYTEIKEAKV 172


>gi|53711552|ref|YP_097544.1| hypothetical protein BF0261 [Bacteroides fragilis YCH46]
 gi|60679811|ref|YP_209955.1| hypothetical protein BF0217 [Bacteroides fragilis NCTC 9343]
 gi|253564387|ref|ZP_04841844.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764944|ref|ZP_06093219.1| UPF0090 protein [Bacteroides sp. 2_1_16]
 gi|81317116|sp|Q5LIN3|RIMP_BACFN RecName: Full=Ribosome maturation factor rimP
 gi|81383870|sp|Q64ZR6|RIMP_BACFR RecName: Full=Ribosome maturation factor rimP
 gi|52214417|dbj|BAD47010.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60491245|emb|CAH05993.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|251948163|gb|EES88445.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263254328|gb|EEZ25762.1| UPF0090 protein [Bacteroides sp. 2_1_16]
 gi|301161334|emb|CBW20874.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 155

 Score = 77.0 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 69/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E+  +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEDKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRFIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYNHIGLEVEVLTK----GGRKLSGVLKDADEEKFV 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSARLIVT 175
           +  +K+ + +        E     ++D +   + +++
Sbjct: 117 VTVQKKVKPEGAKRPQLVEEDETFTYDDIKYTKYLIS 153


>gi|29348811|ref|NP_812314.1| hypothetical protein BT_3402 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568844|ref|ZP_04846254.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|34223111|sp|Q8A2A3|RIMP_BACTN RecName: Full=Ribosome maturation factor rimP
 gi|29340717|gb|AAO78508.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840863|gb|EES68944.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 155

 Score = 77.0 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 67/157 (42%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRFIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V         D +KL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVVTR----DGRKLAGILKDADEEKFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 ++ E      + E     +++ +   + +++
Sbjct: 117 VGVQKKVKLEGSKRPKLIEEDETFTYEQIKYTKYLIS 153


>gi|323343774|ref|ZP_08084001.1| hypothetical protein HMPREF0663_10536 [Prevotella oralis ATCC
           33269]
 gi|323095593|gb|EFZ38167.1| hypothetical protein HMPREF0663_10536 [Prevotella oralis ATCC
           33269]
          Length = 155

 Score = 77.0 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 60/148 (40%), Gaps = 17/148 (11%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  ++   ++   +  V + +  +  ++++  ++  DG + + DC ELS+ I   L  D 
Sbjct: 7   VKKLVDEWLQNKDYFLVGVEISPDDKIVVE--IDHADG-VWIEDCVELSKYIESYLSRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      ++ + G  V         D  K+ G +       
Sbjct: 64  ED-----YELEVGSAGLGQPFKVPQQYINFIGKEVEV----LDADGVKVKGLLKSVDGNE 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSA 170
           F +   ++ + +  +  +      +  A
Sbjct: 115 FVVTVREKVKVEGKKRPV---LQDVDHA 139


>gi|240146077|ref|ZP_04744678.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
 gi|257201822|gb|EEV00107.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
          Length = 76

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEK 153
           VSSPG+ RP+ ++ D++R  G  V      +   +++  G +    E    ++ E   E 
Sbjct: 1   VSSPGLGRPLKKEKDYIRSMGKEVEIRTYRAINREKEFYGILSAYDENTVTIKTEDGTEM 60

Query: 154 DMNELQIAI 162
              +  IA+
Sbjct: 61  TFEKSDIAL 69


>gi|256838935|ref|ZP_05544445.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|301308162|ref|ZP_07214116.1| conserved hypothetical protein [Bacteroides sp. 20_3]
 gi|256739854|gb|EEU53178.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|300833632|gb|EFK64248.1| conserved hypothetical protein [Bacteroides sp. 20_3]
          Length = 155

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 20/152 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--V 82
           +S +++  +   S   V + +      L+ + ++ D+  +++ DC ELS+ +   LD  V
Sbjct: 7   VSQLVEEKLASSSNYLVDVVIKPGN--LIVVEIDNDE-AVSIDDCAELSRYLEEHLDRDV 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S GI  P      +++  G+ V   +     +  KL G +    E G
Sbjct: 64  ED-----YELEVGSAGITSPFKVLRQYVKNIGNEVEMLLK----NGSKLTGVLKSADENG 114

Query: 143 FFLEKEKRGEKDMNELQIAI------SFDSLL 168
             +  EK+ + +  + ++ +      +FD + 
Sbjct: 115 VVVSVEKKVKPEGAKRKVTVIEDESYTFDEIK 146


>gi|218131823|ref|ZP_03460627.1| hypothetical protein BACEGG_03444 [Bacteroides eggerthii DSM 20697]
 gi|317474561|ref|ZP_07933835.1| hypothetical protein HMPREF1016_00814 [Bacteroides eggerthii
           1_2_48FAA]
 gi|217986126|gb|EEC52465.1| hypothetical protein BACEGG_03444 [Bacteroides eggerthii DSM 20697]
 gi|316909242|gb|EFV30922.1| hypothetical protein HMPREF1016_00814 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 155

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 70/157 (44%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E+  +  V++ +  +  ++++  ++  +G + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLEDKDYFLVEVIISPDDKIVVE--IDHKEG-VWIEDCVELSRYIESRLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V       + D +K  G + G  E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYVNHIGKEVEV----LAKDGRKHCGILKGADEQQFT 116

Query: 145 LEKEKR------GEKDMNELQIAISFDSLLSARLIVT 175
           +  +K+          M +  +  +++ +   + +++
Sbjct: 117 VTVQKKVKEEGAKRPKMVDEDLTFTYEEIKYTKYLIS 153


>gi|86140763|ref|ZP_01059322.1| hypothetical protein MED217_16465 [Leeuwenhoekiella blandensis
           MED217]
 gi|85832705|gb|EAQ51154.1| hypothetical protein MED217_16465 [Leeuwenhoekiella blandensis
           MED217]
          Length = 154

 Score = 76.6 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 72/159 (45%), Gaps = 17/159 (10%)

Query: 21  LAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +++++    +E  S   + + +     ++  + ++ D+G ++++DC  +S+ +   
Sbjct: 2   LKEKVAALLDEAFKEYPSLYLIDLKIKGNNEIV--VIIDGDEG-VSVQDCINVSRKVEHN 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E   E  + LEV S G   P+V K  + +  G  +   +     D  K+ G ++   
Sbjct: 59  LDRE---EEDFSLEVMSAGATEPLVNKRQYKKNEGRDLEVIL----QDGAKIKGNLIQVH 111

Query: 140 ETGFFL------EKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  L       KE    K   E +  I++D++  A++
Sbjct: 112 DEGIVLFWKERVPKEVGKGKMTVEKEEVIAYDAIKQAKV 150


>gi|189465080|ref|ZP_03013865.1| hypothetical protein BACINT_01424 [Bacteroides intestinalis DSM
           17393]
 gi|189437354|gb|EDV06339.1| hypothetical protein BACINT_01424 [Bacteroides intestinalis DSM
           17393]
          Length = 155

 Score = 76.3 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 70/157 (44%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLEGKEYFLVEVTISPDDKIVVE--IDHKEG-VWIEDCVELSRYIESKLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V         D +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYINHIGKEVEV----LRKDGRKLCGVLKTADEQHFT 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSARLIVT 175
           +  EK+ + +        E    +++D +   + +++
Sbjct: 117 VTVEKKVKPEGAKRPTLVEEDETLAYDEIKYTKYLIS 153


>gi|84498574|ref|ZP_00997337.1| hypothetical protein JNB_20318 [Janibacter sp. HTCC2649]
 gi|84381107|gb|EAP96992.1| hypothetical protein JNB_20318 [Janibacter sp. HTCC2649]
          Length = 187

 Score = 76.3 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 63  NMTLRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           +++L +    +  +S  LD  +++ E  Y LEV+SPG+ RP+   S F R  G +V    
Sbjct: 56  SLSLDEIASATHTVSDALDESDVLGEQPYTLEVTSPGVSRPLTAASHFRRNVGRLVVLTP 115

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
                D + + G+I+   +    L       K   E     ++ ++  A
Sbjct: 116 ----QDGEPVTGRIVRAGDDDLTLLV--PAVKKAPERDEIFAYAAIDRA 158


>gi|294827764|ref|NP_711122.2| hypothetical protein LA_0941 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293385607|gb|AAN48140.2| conserved hypothetical protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 123

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 57  VERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV 116
           +E   G+++L +CE++S+ +   L+  +     Y L+VSS G +R +    D  R+ G  
Sbjct: 4   LEHPYGSVSLLECEQVSRKLKEELERISPDLD-YTLKVSSAGAERKLNLPGDLDRFRGIP 62

Query: 117 VACEIVLSSGDKQKLIG--KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   +  S   +++  G  +++        LEK ++G+K + + Q  ++   +L   L V
Sbjct: 63  IRL-VFRSEESEKEQEGIFRVVNRDGDQIVLEKFQKGKKSVVKKQTTLNLKDILKGNLYV 121


>gi|227503406|ref|ZP_03933455.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
 gi|227075909|gb|EEI13872.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
          Length = 179

 Score = 75.9 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 17/157 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++QP +         I   +  K   + I ++ D    +    EE+S  IS   
Sbjct: 6   AQQLTDLLQPRLAARGLDVEDIKTTKAGKKSQVIIRIDGDKRP-SSDVLEEVSDDISAFF 64

Query: 81  DVENIIEG-----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D +           Y LEVS+PG+D P+     + R  G  V        GD +    +I
Sbjct: 65  DEKEETGELNFGAGYTLEVSTPGVDLPLTSPRHWRRNQGRKVTFN----RGDDKSHTARI 120

Query: 136 --MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
             +  +E    L   ++ E      +     +++  A
Sbjct: 121 GALNAAEDAVVLITSEKNEVHTEVER----LENIAHA 153


>gi|288800575|ref|ZP_06406033.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288332788|gb|EFC71268.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 155

 Score = 75.9 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 53/121 (43%), Gaps = 14/121 (11%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  +++  +++  +  V I +  +  ++++  ++  +G + + DC  LS+ I   +  D 
Sbjct: 7   VKQLVEQWLQDKDYFLVGIEVSNDDRVVVE--IDHSEG-VWIEDCVALSKFIEDHMSKDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            +     Y LEV S G+ +P      ++ + G  V         D +K+ G +     T 
Sbjct: 64  VD-----YELEVGSAGLGQPFKVPQQYINFIGKEVEV----LDADGRKVKGLLKSVEGTA 114

Query: 143 F 143
           F
Sbjct: 115 F 115


>gi|255325208|ref|ZP_05366314.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
 gi|311739682|ref|ZP_07713517.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|255297773|gb|EET77084.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
 gi|311305498|gb|EFQ81566.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 179

 Score = 75.9 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 17/157 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++QP + E       I   +  K   + I ++ D    +    EE+S  IS   
Sbjct: 6   AQQLTDLLQPKLAERGLDVEDIKTTKAGKKSQVIIRIDGDKRP-SSDVLEEVSNEISAFF 64

Query: 81  DVENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D +           Y LEVS+PG+D P+     + R  G  V+ ++    GD +    +I
Sbjct: 65  DDKEAQGELNFGAGYTLEVSTPGVDLPLTAPRHWRRNRGRKVSFDL----GDGKTQSARI 120

Query: 136 MGTSE--TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              ++      L    + +      +     +++  A
Sbjct: 121 GALNDAADAVILITASKKDVQARAER----LENIARA 153


>gi|298480546|ref|ZP_06998743.1| conserved hypothetical protein [Bacteroides sp. D22]
 gi|298273367|gb|EFI14931.1| conserved hypothetical protein [Bacteroides sp. D22]
          Length = 155

 Score = 75.9 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVDEWLEGKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRYIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V         D +KL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVLTK----DGRKLAGILKDADEEKFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 ++ E      + E     +++ +   + +++
Sbjct: 117 VAVQKKVKLEGAKRPKLQEEDETFTYEQIKYTKYLIS 153


>gi|330997780|ref|ZP_08321615.1| hypothetical protein HMPREF9442_02717 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329569668|gb|EGG51433.1| hypothetical protein HMPREF9442_02717 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 155

 Score = 75.9 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 16/150 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V +++  +  ++++  ++  +G + + DC ELS+ I   L  E 
Sbjct: 7   VRGLVEEWLEGRDYFLVDVAVSADDRIVVE--IDHAEG-VWIEDCVELSRFIESRLSRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      ++   G  V         D +KL G +       F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYVNHVGSEVDV----LMADGRKLHGVLTAAGPESFE 116

Query: 145 L------EKEKRGEKDMNELQIAISFDSLL 168
           +      + E        E  + + +D + 
Sbjct: 117 VTVKVKRKLEGEKRPKWVEETVTLRYDEIK 146


>gi|237716686|ref|ZP_04547167.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405462|ref|ZP_06082012.1| UPF0090 protein [Bacteroides sp. 2_1_22]
 gi|294646241|ref|ZP_06723895.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294809091|ref|ZP_06767809.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229442669|gb|EEO48460.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356337|gb|EEZ05427.1| UPF0090 protein [Bacteroides sp. 2_1_22]
 gi|292638459|gb|EFF56823.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294443645|gb|EFG12394.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 155

 Score = 75.9 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVDEWLEGKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRYIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V         D +KL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVLTK----DGRKLAGILKDADEEKFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 ++ E      + E     +++ +   + +++
Sbjct: 117 VAVQKKVKLEGSKRPKLQEEDETFTYEQIKYTKYLIS 153


>gi|157414093|ref|YP_001484959.1| hypothetical protein P9215_17601 [Prochlorococcus marinus str. MIT
           9215]
 gi|166980224|sp|A8G6Z2|RIMP_PROM2 RecName: Full=Ribosome maturation factor rimP
 gi|157388668|gb|ABV51373.1| DUF150 [Prochlorococcus marinus str. MIT 9215]
          Length = 155

 Score = 75.9 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 68/148 (45%), Gaps = 2/148 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGN-MTLRDCEELSQAISPILD 81
            +  +++ V  E   +   I++   +N  +++I +++ +G+ ++L DC   +   S  ++
Sbjct: 8   KLEILLKKVANEWDLKICSINIQTNQNPTVVKIIIKKTNGDDISLEDCALFNAPASEEIE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             N++   Y LE+SS G+   +    DF  + G  V  ++   +  K+ L G +   S  
Sbjct: 68  NSNLLNCSYVLEISSQGVSDELTSDRDFKTFKGFPVNVQLNQKNSKKKFLNGLLYEKSND 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLS 169
              +  + + +K   +  + IS  +L  
Sbjct: 128 YLAINIKGKIKKIPFDEVLKISLCTLKD 155


>gi|239917226|ref|YP_002956784.1| hypothetical protein Mlut_06980 [Micrococcus luteus NCTC 2665]
 gi|281414300|ref|ZP_06246042.1| hypothetical protein MlutN2_03688 [Micrococcus luteus NCTC 2665]
 gi|239838433|gb|ACS30230.1| uncharacterized conserved protein [Micrococcus luteus NCTC 2665]
          Length = 195

 Score = 75.5 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 66/179 (36%), Gaps = 23/179 (12%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M+ST       E R   +  LA D   V+   +               ++  +++ ++R 
Sbjct: 1   MDSTDRRDDHAELRTRVEEALAAD--DVVVEQVRATG---------TAEHRTVEVVLDRA 49

Query: 61  DG--NMTLRDCEELSQAISPILD-----VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN 113
            G   ++L D   LS  +S  LD     V  +  G Y LEV++ G+DRP+       R  
Sbjct: 50  SGTYGLSLDDVARLSGRVSAALDALGDHVPGVGAGEYLLEVTTAGVDRPLTEPRHLARNV 109

Query: 114 GHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G +V             +  ++   ++    L   +   K    ++  +  + +   RL
Sbjct: 110 GRLVEVS----VDGAAPVTARLKDVTDDDVELAVVRPPAKKGMRVK-ELPAERVALDRL 163


>gi|315023859|gb|EFT36861.1| hypothetical protein RAYM_00555 [Riemerella anatipestifer RA-YM]
 gi|325335774|gb|ADZ12048.1| Uncharacterized protein family UPF0090 [Riemerella anatipestifer
           RA-GD]
          Length = 177

 Score = 75.5 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 70/163 (42%), Gaps = 17/163 (10%)

Query: 19  MGLAGDISSVIQPVI-EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + +++   + E      + + +    +++  + ++ D+G +TL+DC + S+AI 
Sbjct: 23  MSIKAQVETLLNDFLSEREDLFLIDLKVSAGDDVV--VILDGDNG-VTLQDCLDASRAIE 79

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E   E  + L+V S G+  P+ +   F +  G  +   +     D  K+ G++  
Sbjct: 80  FNMDRE---EHDFSLQVMSAGLSEPLTQIRQFRKNIGRDLDILL----NDSSKIEGELAR 132

Query: 138 TSETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
             E    L    R  K++ + ++       I    +  A + +
Sbjct: 133 VEEDKVVLILRYRKPKEIGKGKVDVEEEKEILLSDIKKALVAI 175


>gi|160887869|ref|ZP_02068872.1| hypothetical protein BACUNI_00272 [Bacteroides uniformis ATCC 8492]
 gi|270294868|ref|ZP_06201069.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317477856|ref|ZP_07937042.1| hypothetical protein HMPREF1007_00158 [Bacteroides sp. 4_1_36]
 gi|156862555|gb|EDO55986.1| hypothetical protein BACUNI_00272 [Bacteroides uniformis ATCC 8492]
 gi|270274115|gb|EFA19976.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905992|gb|EFV27760.1| hypothetical protein HMPREF1007_00158 [Bacteroides sp. 4_1_36]
          Length = 155

 Score = 75.5 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 69/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +    +  V++++  +  +L++  ++  +G + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLAGKDYFLVEVTISPDDKILVE--IDHKEG-VWIEDCVELSRYIESKLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V       + D +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYINHIGKEVEV----LAKDGRKLSGVLKEADEQHFV 116

Query: 145 LEKEKR------GEKDMNELQIAISFDSLLSARLIVT 175
           +  +K+          + +  +  +++ +   + +++
Sbjct: 117 VTIQKKVKEEGAKRPKLVDEDLTFTYEEIKYTKYLIS 153


>gi|329964511|ref|ZP_08301565.1| hypothetical protein HMPREF9446_03170 [Bacteroides fluxus YIT
           12057]
 gi|328524911|gb|EGF51963.1| hypothetical protein HMPREF9446_03170 [Bacteroides fluxus YIT
           12057]
          Length = 155

 Score = 75.5 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 69/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVDEWLEGKDYFLVEVTISPDDKIVVE--IDHKEG-VWIEDCVELSRYIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      ++   G  V         D +KL G +    +  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYINHVGKEVEVLTR----DGRKLGGVLKEADDRHFV 116

Query: 145 LEKEKR------GEKDMNELQIAISFDSLLSARLIVT 175
           +  +K+          M +  + + +D +   + +++
Sbjct: 117 VTVQKKVKEEGAKRPKMVDEDLTLKYDEIKYTKYLIS 153


>gi|224536665|ref|ZP_03677204.1| hypothetical protein BACCELL_01541 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521756|gb|EEF90861.1| hypothetical protein BACCELL_01541 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 155

 Score = 75.5 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 69/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   ++   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLDGKEYFLVEVAISPDDKIVVE--IDHKEG-VWIEDCVELSRYIESKLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V         D +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYTNHIGKEVEV----LRKDGRKLCGVLKAADEQHFT 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSARLIVT 175
           +  EK+ + +        +    +++D +   + +++
Sbjct: 117 VTVEKKVKPEGAKRPQLVQEDEMLAYDEIKYTKYLIS 153


>gi|146299388|ref|YP_001193979.1| hypothetical protein Fjoh_1628 [Flavobacterium johnsoniae UW101]
 gi|146153806|gb|ABQ04660.1| protein of unknown function DUF150 [Flavobacterium johnsoniae
           UW101]
          Length = 166

 Score = 75.1 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 78/170 (45%), Gaps = 18/170 (10%)

Query: 13  PRIFGDMGLAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           P  +  M     ++ +I + ++E+ S   + +++ +  +  + + ++ D+G + L+DC +
Sbjct: 7   PSFYKIMTFKEKVNELITEALLEKPSIFLIDLAVSD--SFKISVGLDGDNG-VALQDCID 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+AI   LD E   E  + LEV+S G+  P+     + +  G  +         + +K+
Sbjct: 64  ISRAIENNLDRE---EQDFSLEVASVGVGSPLKLIRQYKKNIGRTLIVTT-----NNEKI 115

Query: 132 IGKIMGTSETGFFLE------KEKRGEKDMNELQIAISFDSLLSARLIVT 175
             +++  ++    L       K+    K+  + +  I +  +  A + VT
Sbjct: 116 EAELIEANDVFIILSWKAREPKKVGKGKETVQKEQQIPYTEIKEAVVTVT 165


>gi|319900403|ref|YP_004160131.1| hypothetical protein Bache_0520 [Bacteroides helcogenes P 36-108]
 gi|319415434|gb|ADV42545.1| protein of unknown function DUF150 [Bacteroides helcogenes P
           36-108]
          Length = 155

 Score = 75.1 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++ ++   + +L + ++  +G + + DC ELS+ I   L  E+
Sbjct: 7   VCQIVDEWLEGKDYFLVEV-IISPDDKIL-VEIDHKEG-VWIEDCVELSRYIESRLSRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V         D +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYINHIGSEVEVLTK----DGRKLCGVLKEADERHFV 116

Query: 145 LEKEKR------GEKDMNELQIAISFDSLLSARLIVT 175
           +  +K+          M +  ++ ++D +   + +++
Sbjct: 117 VTIQKKVKEEGAKRPKMVDEDLSFAYDEIKYTKYLIS 153


>gi|295086244|emb|CBK67767.1| Uncharacterized protein conserved in bacteria [Bacteroides
           xylanisolvens XB1A]
          Length = 155

 Score = 74.7 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++  ++  +G + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVDEWLEGKDYFLVEVTVSPDDKIVVE--IDHAEG-VWIEDCVELSRYIESKLNRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      +    G  V         D +KL G +    E  F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVLTK----DGRKLAGILKDADEEKFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 ++ E      + E     +++ +   + +++
Sbjct: 117 VAVQKKVKLEGSKRPKLIEEDETFTYEQIKYTKYLIS 153


>gi|254526613|ref|ZP_05138665.1| hypothetical protein P9202_1265 [Prochlorococcus marinus str. MIT
           9202]
 gi|221538037|gb|EEE40490.1| hypothetical protein P9202_1265 [Prochlorococcus marinus str. MIT
           9202]
          Length = 155

 Score = 74.7 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 68/148 (45%), Gaps = 2/148 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGN-MTLRDCEELSQAISPILD 81
            +  +++ V  E   +   +++   +N  +++I +++ +G+ ++L DC   +   S  ++
Sbjct: 8   KLEILLKKVANEWDLKICSLNIQTNQNPTVVKITIKKTNGDDISLEDCALFNAPASEEIE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             N++   Y LE+SS G+   +    DF  + G  V  ++   +  K+ L G +   S  
Sbjct: 68  NSNLLNCSYVLEISSQGVSDELTSDRDFKTFKGFPVNVQLNQKNSKKKFLNGLLYEKSND 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLS 169
              +  + + +K   +  + IS  +L  
Sbjct: 128 YLAINIKGKIKKIPFDEVLKISLCTLKD 155


>gi|291460013|ref|ZP_06599403.1| hypothetical protein GCWU000341_02180 [Oribacterium sp. oral
          taxon 078 str. F0262]
 gi|291417354|gb|EFE91073.1| hypothetical protein GCWU000341_02180 [Oribacterium sp. oral
          taxon 078 str. F0262]
          Length = 98

 Score = 74.7 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 30 QPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDG-NMTLRDCEELSQAISPILDVENIIE 87
          + +   + +    +S   E  +  L++F+ R DG  MT  DC  +S+ +S  LD E+ IE
Sbjct: 12 EELAPSLGYELDSVSYTREDGVNYLRVFILRKDGEPMTTDDCAAVSRPLSRWLDKEDFIE 71

Query: 88 GHYRLEVSSPG 98
            Y LEV S G
Sbjct: 72 DEYVLEVCSLG 82


>gi|145295892|ref|YP_001138713.1| hypothetical protein cgR_1817 [Corynebacterium glutamicum R]
 gi|166980238|sp|A4QEZ5|RIMP_CORGB RecName: Full=Ribosome maturation factor rimP
 gi|140845812|dbj|BAF54811.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 178

 Score = 74.3 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 13/134 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S++I+P+     F    + + +      + I V+ D     L   E  SQ I  + D  
Sbjct: 9   LSALIEPLAASHKFDLEGLKVTKAGPKSAVAIKVDSDSRP-DLDQLEVFSQEIGELFDAA 67

Query: 84  NI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL--IGKIM 136
                      Y LEVS+PG+D P+     + R  G +VA +       ++++  IG + 
Sbjct: 68  EQRGELNFGAGYTLEVSTPGVDNPLTLPRHWRRNRGRLVALD----QDGRKRVARIGALN 123

Query: 137 GTSETGFFLEKEKR 150
                   +E+ K+
Sbjct: 124 DAETHVVLIERNKK 137


>gi|306836352|ref|ZP_07469330.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
 gi|304567712|gb|EFM43299.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
          Length = 179

 Score = 74.3 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 17/157 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++QP +         I   +  K   + I ++ D    +    EE+S  IS   
Sbjct: 6   AQQLADLLQPRLAARGLDVEDIKTTKAGKKSQVIIRIDGDKRP-SSDVLEEVSDDISAFF 64

Query: 81  DVENIIEG-----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D +           Y LEVS+PG+D P+     + R  G  V        GD +    +I
Sbjct: 65  DEKEETGELNFGAGYTLEVSTPGVDLPLTAPRHWRRNQGRKVTFN----RGDDKSHTARI 120

Query: 136 --MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
             +  +E    L   ++ E      +     +++  A
Sbjct: 121 GALNAAEDAVVLITSEKNEVHTEVER----LENIAHA 153


>gi|237785728|ref|YP_002906433.1| hypothetical protein ckrop_1145 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259585744|sp|C4LJ85|RIMP_CORK4 RecName: Full=Ribosome maturation factor rimP
 gi|237758640|gb|ACR17890.1| hypothetical protein ckrop_1145 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 189

 Score = 74.3 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 22/168 (13%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   +  ++ P    +    V I     K+ ++ I ++ D     L   EELS  IS   
Sbjct: 9   ITQRVQQIVGP--RGLDVEKVDIKKAGAKSAVI-IRIDGDQRP-DLDVIEELSDEISRNF 64

Query: 81  DVENIIEG-----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-------K 128
           D             YRLEVS+PG D P++    F R  GH+    +  +  +        
Sbjct: 65  DAAESDGELNFGAGYRLEVSTPGFDEPLLAARHFRRQRGHIATFVLNQADDEHATANAAN 124

Query: 129 QKLIGKI--MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            + + ++  +   ET   +    + E  +         D +  A+L V
Sbjct: 125 ARFVARVGALNADETELAVVLPGKKEPSVK----TYPLDQIREAKLEV 168


>gi|227872000|ref|ZP_03990385.1| conserved hypothetical protein [Oribacterium sinus F0268]
 gi|227842143|gb|EEJ52388.1| conserved hypothetical protein [Oribacterium sinus F0268]
          Length = 108

 Score = 74.3 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 22 AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFV-ERDDGNMTLRDCEELSQAISPI 79
               + ++ ++  M +    ++  +E     L+ F+  +D+ +MT+ DC  +S+ +S  
Sbjct: 3  IERTKAYLEEILPGMGYVLDSVTYTIEAGTHYLRAFIFRKDEQDMTVNDCAMVSRRLSKW 62

Query: 80 LDVENIIEGHYRLEVSSPG 98
          LD E+ I   Y LEV S G
Sbjct: 63 LDKEDFIAEEYILEVCSLG 81


>gi|255536445|ref|YP_003096816.1| hypothetical protein FIC_02321 [Flavobacteriaceae bacterium
           3519-10]
 gi|255342641|gb|ACU08754.1| conserved hypothetical protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 155

 Score = 74.3 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 17/159 (10%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     I  ++   + E      V +      +  + + ++ D G +TL+DC + S+AI 
Sbjct: 1   MDFRTKIEELLHGFLAERPDLFLVDLKFSAGDD--ITVILDGDSG-VTLQDCLDASRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E   E  + L+V S G+  P+V    F +  G  +         D  ++ G++  
Sbjct: 58  FNVDRE---EHDFALQVMSAGLSEPLVSPRQFRKNIGRELDI----LMKDSTQIEGELSK 110

Query: 138 TSETGFFLEKEKRGEKDMNE------LQIAISFDSLLSA 170
             E    L  + R  K++ +       +  I +  +  A
Sbjct: 111 VDEDKITLVLQYRKPKEIGKGKMDVTEEKEILYTDIKKA 149


>gi|227833357|ref|YP_002835064.1| hypothetical protein cauri_1533 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262184343|ref|ZP_06043764.1| hypothetical protein CaurA7_10158 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254800550|sp|C3PH22|RIMP_CORA7 RecName: Full=Ribosome maturation factor rimP
 gi|227454373|gb|ACP33126.1| hypothetical protein cauri_1533 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 188

 Score = 73.9 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 7/145 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++ ++QPV          +      K   + I ++ D+   +    EELSQ IS I D
Sbjct: 7   AQLTEILQPVAAARGLDIEDVKTTRAGKKSQVIIRIDGDERP-SSDLIEELSQEISEIFD 65

Query: 82  VENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            +           Y LEVS+PG+D P+     + R  G +V   +    G  +      +
Sbjct: 66  AQEEAGTLNFGAGYTLEVSTPGVDFPLSASRHWRRNQGRLVGYALAEEPGTTRVARIGAL 125

Query: 137 GTSETGFFLEKEKRGEKDMNELQIA 161
              E    L    + E      ++ 
Sbjct: 126 SEDEESVALITMVKKEVRYQIERLE 150


>gi|19553192|ref|NP_601194.1| hypothetical protein NCgl1913 [Corynebacterium glutamicum ATCC
           13032]
 gi|62390828|ref|YP_226230.1| hypothetical protein cg2179 [Corynebacterium glutamicum ATCC 13032]
 gi|34223122|sp|Q8NP37|RIMP_CORGL RecName: Full=Ribosome maturation factor rimP
 gi|21324758|dbj|BAB99381.1| Uncharacterized BCR [Corynebacterium glutamicum ATCC 13032]
 gi|41326166|emb|CAF20329.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
           13032]
          Length = 178

 Score = 73.9 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 12/145 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +S++I+P+     F    + + +      + I V+ D     L   E  SQ I  + D  
Sbjct: 9   LSALIEPLAASHKFDLEGLKVTKAGPKSAVAIKVDSDSRP-DLDQLEVFSQEIGELFDAA 67

Query: 84  NI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
                      Y LEVS+PG+D P+     + R  G +VA        D +K + +I   
Sbjct: 68  EQRGELNFGAGYTLEVSTPGVDNPLTLPRHWRRNRGRLVAL-----DQDGKKRVARIGAL 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAIS 163
           ++    +   +R +K +    + ++
Sbjct: 123 NDAETHVVLIERNKKLLEVTTLELA 147


>gi|329954142|ref|ZP_08295237.1| hypothetical protein HMPREF9445_00063 [Bacteroides clarus YIT
           12056]
 gi|328528119|gb|EGF55099.1| hypothetical protein HMPREF9445_00063 [Bacteroides clarus YIT
           12056]
          Length = 155

 Score = 73.9 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 68/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +++  +  V++ +  +  ++++  ++  +G + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLKDKDYFLVEVIISPDDKIVVE--IDHKEG-VWIEDCVELSRYIESRLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V       + D +K  G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYTNHIGKDVEV----LAKDGRKYCGTLKDADERQFT 116

Query: 145 LEKEKR------GEKDMNELQIAISFDSLLSARLIVT 175
           +  +K+          M +  I  +++ +   + +++
Sbjct: 117 VTVQKKVKEEGAKRPKMVDEDITFTYEEIKYTKYLIS 153


>gi|296139426|ref|YP_003646669.1| hypothetical protein Tpau_1712 [Tsukamurella paurometabola DSM
           20162]
 gi|296027560|gb|ADG78330.1| protein of unknown function DUF150 [Tsukamurella paurometabola DSM
           20162]
          Length = 190

 Score = 73.9 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 10/129 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +S+VI P + +      QI +       ++ + V+ D G  TL    +L++ +S  +
Sbjct: 5   EAAVSTVIAPHLADAGLDLEQIRITNAGPKSVIAVVVDSDAGP-TLDVLADLARTLSDAV 63

Query: 81  DVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI--M 136
           D  + + G   + LEV++PG +RP+     + R  G   A E+         L+ +I  +
Sbjct: 64  DGADDVFGGQAFTLEVTTPGAERPLREARHWRRARGRQAAIEL----AGGDTLLARIGPL 119

Query: 137 GTSETGFFL 145
              ET   +
Sbjct: 120 SDDETSVTV 128


>gi|313206786|ref|YP_004045963.1| hypothetical protein Riean_1300 [Riemerella anatipestifer DSM
           15868]
 gi|312446102|gb|ADQ82457.1| protein of unknown function DUF150 [Riemerella anatipestifer DSM
           15868]
          Length = 155

 Score = 73.6 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 70/163 (42%), Gaps = 17/163 (10%)

Query: 19  MGLAGDISSVIQPVI-EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + +++   + E      + + +    +++  + ++ D+G +TL+DC + S+AI 
Sbjct: 1   MSIKAQVETLLNDFLSEREDLFLIDLKVSAGDDVV--VILDGDNG-VTLQDCLDASRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E   E  + L+V S G+  P+ +   F +  G  +   +     D  K+ G++  
Sbjct: 58  FNMDRE---EHDFSLQVMSAGLSEPLTQIRQFRKNIGRDLDILL----NDSSKIEGELAR 110

Query: 138 TSETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
             E    L    R  K++ + +I       I    +  A + +
Sbjct: 111 VEENKVVLILRYRKPKEIGKGKIDVEEEKEILLSDIKKALVAI 153


>gi|328948923|ref|YP_004366260.1| hypothetical protein Tresu_2093 [Treponema succinifaciens DSM 2489]
 gi|328449247|gb|AEB14963.1| protein of unknown function DUF150 [Treponema succinifaciens DSM
           2489]
          Length = 155

 Score = 73.2 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 64/144 (44%), Gaps = 14/144 (9%)

Query: 32  VIEEMSFRSVQISLLEEKNLL-LQIFVERDDG--NMTLRDCEELSQAI-SPILDVENIIE 87
           V+    F+ V++ ++ +   + +   +   D   ++ + DC +  +A+ S ++ +    E
Sbjct: 18  VMSAEGFKLVELHVVPQNGKINISAVIASSDSKKDIGVSDCAKAHRALFSEMVKILGKNE 77

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
               +E+ SPGI+R +   ++F  + G  V       +     + GKI  + +    LE 
Sbjct: 78  DDISMEMCSPGIERTLRNAAEFEIFTGREVRVWDKNVND---WVCGKIKSSDKNQVTLEL 134

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
           E  GE+       ++++  +  A+
Sbjct: 135 EGGGEE-------SVAYADIAKAK 151


>gi|225021162|ref|ZP_03710354.1| hypothetical protein CORMATOL_01174 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305680947|ref|ZP_07403754.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
           14266]
 gi|224946069|gb|EEG27278.1| hypothetical protein CORMATOL_01174 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305659152|gb|EFM48652.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
           14266]
          Length = 188

 Score = 72.8 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 18/145 (12%)

Query: 28  VIQPVIEEMSFRSVQISLLE----EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++QPV ++       I  ++     K  ++ I V+ D+        E ++Q IS + D +
Sbjct: 15  LVQPVADQYGM---DIEYIKISRAGKKSVVAIAVDADNRP-DSDVLEAITQEISELFDEQ 70

Query: 84  NI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
                      Y LEVS+PG+  P+ +   + R  G +V         D +K   +I   
Sbjct: 71  ETAGVLNFGPGYTLEVSTPGVSTPLTKPRHWRRNRGRLVTL-----VDDGKKRQVRIGAL 125

Query: 139 SETGFFLEKEKRGEKDMNELQIAIS 163
           ++    +   +R  K      I ++
Sbjct: 126 NDDETSVITIERVGKKFVVAPIQLA 150


>gi|333029429|ref|ZP_08457490.1| Ribosome maturation factor rimP [Bacteroides coprosuis DSM 18011]
 gi|332740026|gb|EGJ70508.1| Ribosome maturation factor rimP [Bacteroides coprosuis DSM 18011]
          Length = 155

 Score = 72.4 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 70/159 (44%), Gaps = 20/159 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  +++  +E   +  V++S+  +  ++++  ++  +G + + DC +LS+ I   L  D 
Sbjct: 7   VHQIVEEWLEGKEYFLVEVSVESDDKIVVE--IDHAEG-VWIEDCVDLSRFIESKLNRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S G+ +P      +    G  V            KLIG+++  +E G
Sbjct: 64  ED-----YELEVGSAGVGQPFKVLQQYYNHIGRQVEVLEKTGI----KLIGELLDVTEDG 114

Query: 143 F------FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                   ++ E      +  ++  I F+ +   + +++
Sbjct: 115 IKVAVEKKVKVEGSKRPKLIAVEEDIPFEKIKYTKYLIS 153


>gi|167764122|ref|ZP_02436249.1| hypothetical protein BACSTE_02505 [Bacteroides stercoris ATCC
           43183]
 gi|167698238|gb|EDS14817.1| hypothetical protein BACSTE_02505 [Bacteroides stercoris ATCC
           43183]
          Length = 155

 Score = 72.4 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 69/157 (43%), Gaps = 16/157 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E+  +  V++ +  +  ++++  ++  +G + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLEDKEYFLVEVIISPDDKIVVE--IDHKEG-VWIEDCVELSRYIESRLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V       + D +K  G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYVNHIGKEVEV----LAKDGRKHCGVLKDADERQFT 116

Query: 145 LEKEKR------GEKDMNELQIAISFDSLLSARLIVT 175
           +  +K+          M +  +  +++ +   + +++
Sbjct: 117 VTVQKKVKEEGAKRPKMVDEDLTFTYEEIKYTKYLIS 153


>gi|332881708|ref|ZP_08449356.1| hypothetical protein HMPREF9074_05149 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680347|gb|EGJ53296.1| hypothetical protein HMPREF9074_05149 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 155

 Score = 72.0 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 10/133 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V +S+  +  ++++  ++  +G + + DC ELS+ I   L  E 
Sbjct: 7   VKGLVEEWLEGRDYFLVDVSVSADDRIVVE--IDHAEG-VWIEDCVELSRFIESRLSRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV S GI +P      ++   G  V         D +KL G +       F 
Sbjct: 63  --EEDYELEVGSAGIGQPFKVLQQYVNHVGSEVDVLT----ADGRKLHGVLTAAGPEDFE 116

Query: 145 LEKEKRGEKDMNE 157
           +  + + + +  +
Sbjct: 117 VTMKVKKKLEGEK 129


>gi|88802099|ref|ZP_01117627.1| hypothetical protein PI23P_05532 [Polaribacter irgensii 23-P]
 gi|88782757|gb|EAR13934.1| hypothetical protein PI23P_05532 [Polaribacter irgensii 23-P]
          Length = 153

 Score = 71.6 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 16/154 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I  ++   +  ++     I L    N  +++ V+ D+G + L +C  +S+ I   LD E 
Sbjct: 6   IKDLVDEAL-ALNDSLYLIELSISVNDKIKVVVDGDNG-VPLSECIRISKNIDANLDRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                + LEV++P I  P+  K  +L+    ++  +        ++  G +    E    
Sbjct: 63  --SEDFSLEVTTPDIAHPLKVKRQYLKNLNRILKVKTAA-----EEFEGTLTAADEDKII 115

Query: 145 LEKEKRGEKDMNE------LQIAISFDSLLSARL 172
           L+ + R  K++ +        I I+   ++ AR+
Sbjct: 116 LQWKAREPKEIGKGKVTVLKTITIAHTDIIEARV 149


>gi|21673078|ref|NP_661143.1| hypothetical protein CT0239 [Chlorobium tepidum TLS]
 gi|34222902|sp|Q8KFT3|RIMP_CHLTE RecName: Full=Ribosome maturation factor rimP
 gi|21646149|gb|AAM71485.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 173

 Score = 71.6 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 16/155 (10%)

Query: 37  SFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENII--EGHYR 91
                 +   +      +++ V+ D G +++  C +LS+AI   L+   E+ +   G + 
Sbjct: 22  GEEIYVVEAAIRAGGRKIELTVDTDKG-VSIDQCAKLSRAIRARLEACEEDSMLSSGEFD 80

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM------GTSETGFFL 145
           L VSSPGI  P+  +  +LR  G ++    +      +++ GK++         +    +
Sbjct: 81  LMVSSPGIGEPIQVQRQYLRHLGRLIRVNYLDEEEQPKEITGKLLEAAVGPEAEQPSITI 140

Query: 146 E--KEKRGEKDMNELQIAISFDSLLSARLIVTDEL 178
           E  KE R ++   E  + I    ++ A  +V  EL
Sbjct: 141 EAVKEGRKKRTAGEPPVTIRLADVVRA--VVQTEL 173


>gi|259585818|sp|A5FJF7|RIMP_FLAJ1 RecName: Full=Ribosome maturation factor rimP
          Length = 154

 Score = 71.6 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 76/164 (46%), Gaps = 18/164 (10%)

Query: 19  MGLAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++ +I + ++E+ S   + +++ +  +  + + ++ D+G + L+DC ++S+AI 
Sbjct: 1   MTFKEKVNELITEALLEKPSIFLIDLAVSD--SFKISVGLDGDNG-VALQDCIDISRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E   E  + LEV+S G+  P+     + +  G  +         + +K+  +++ 
Sbjct: 58  NNLDRE---EQDFSLEVASVGVGSPLKLIRQYKKNIGRTLIVTT-----NNEKIEAELIE 109

Query: 138 TSETGFFLE------KEKRGEKDMNELQIAISFDSLLSARLIVT 175
            ++    L       K+    K+  + +  I +  +  A + VT
Sbjct: 110 ANDVFIILSWKAREPKKVGKGKETVQKEQQIPYTEIKEAVVTVT 153


>gi|300933075|ref|ZP_07148331.1| hypothetical protein CresD4_03348 [Corynebacterium resistens DSM
           45100]
          Length = 200

 Score = 71.6 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 66/181 (36%), Gaps = 37/181 (20%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDG-----------------N 63
              + S+++ V+ +       I +        ++IFV+ +                    
Sbjct: 6   TTQLKSLLETVVHQYGCVIEDIQVARAGAKSSVKIFVDSEVAVPTTLASATEVQPHEFTG 65

Query: 64  MTLRDCEELSQAISPILDVE------NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             L   E+LS+ IS  LD        N   G Y LEV S G   P+V+   +++  G +V
Sbjct: 66  PDLDAVEQLSRDISAELDRAEEQGQLNFGPG-YTLEVGSAGASAPIVKPRHWVKNLGRLV 124

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE--------KDMNELQIAISFDSLLS 169
                   G  +    ++   +E G  L  +K  E        ++++  ++ I F  +  
Sbjct: 125 KL----PEGPLKGAKARVAQAAEDGVILIFKKGKELNVSLHSLEEVSGARVEIEFSKVPE 180

Query: 170 A 170
           A
Sbjct: 181 A 181


>gi|183220910|ref|YP_001838906.1| hypothetical protein LEPBI_I1523 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911006|ref|YP_001962561.1| hypothetical protein LBF_1470 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|226734181|sp|B0SH16|RIMP_LEPBA RecName: Full=Ribosome maturation factor rimP
 gi|226734677|sp|B0SQH2|RIMP_LEPBP RecName: Full=Ribosome maturation factor rimP
 gi|167775682|gb|ABZ93983.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167779332|gb|ABZ97630.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 162

 Score = 71.2 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 11/165 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVER---DDGNMTLRDCE 70
           ++ +  +   I  V+ P +         + +   KN  L +I ++      G+ +L DCE
Sbjct: 2   VYTEENIRELILRVLAPPLA-----LFSLQVQNRKNHALIEIELDHLTDKTGSASLEDCE 56

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ +   LD     E  + L+VSS G +R +    D +R+ G +V  E+ L SG   K
Sbjct: 57  TVSRRLKEELDQWG-EEFDFTLQVSSAGAERVLRLPEDLIRFQGLLVKLEVPLESGKWDK 115

Query: 131 LIGKIMGTSETGFFLE-KEKRGEKDMNELQIAISFDSLLSARLIV 174
            + ++   S     L   +++     N+  +++    +    L +
Sbjct: 116 RLYRLGPVSGDSVELTLYDRKTRHKKNQKSVSMPIAEIRKGNLYL 160


>gi|34223166|sp|Q9Z5J2|RIMP_MYCLE RecName: Full=Putative ribosome maturation factor rimP
          Length = 150

 Score = 71.2 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 2/97 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDV 82
            +  ++   +    +    + +        + +  + D   +       LS ++S +LD 
Sbjct: 10  QVIELLGGEVARAGYEVEDVIIHTWSQPFWITVLADGDT-VLARDIIATLSHSVSALLDG 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
            + I   Y LEVSS G+ RP   +  F R  G  V  
Sbjct: 69  LDNIVDRYFLEVSSLGMGRPFTSEKHFRRARGRKVEL 105


>gi|319441433|ref|ZP_07990589.1| ribosome maturation protein RimP [Corynebacterium variabile DSM
           44702]
          Length = 186

 Score = 71.2 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 16/127 (12%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
             ++  + +P+   + F    +++        +++ V+ D     L   EELSQA+S   
Sbjct: 6   EQELREIAEPLAASLGFDVEAVNITRAGAKSAVRLAVDGDTRP-DLDQLEELSQAVSAEF 64

Query: 81  DVENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D             Y LE+++PG+D P+     F R  G +V           +KL  +I
Sbjct: 65  DARETAGTLNFGPGYTLELTTPGLDTPLTAGRHFRRNVGRLVLLR-------GKKL--RI 115

Query: 136 MGTSETG 142
            G  E G
Sbjct: 116 AGVDEDG 122


>gi|150024571|ref|YP_001295397.1| hypothetical protein FP0468 [Flavobacterium psychrophilum JIP02/86]
 gi|259585775|sp|A6GWV6|RIMP_FLAPJ RecName: Full=Ribosome maturation factor rimP
 gi|149771112|emb|CAL42579.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 154

 Score = 71.2 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 72/163 (44%), Gaps = 18/163 (11%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  +++  + E  +   + +++ +   ++  I ++ D+G + L+DC  +S++I 
Sbjct: 1   MAFKEKVKELLEQGLAEYPNLFLIDLNINDSNKII--ITLDGDNG-VQLQDCINISRSID 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E +    + LEV+S G+  P+     + +  G  +  +        Q +   ++ 
Sbjct: 58  NNLDREEV---DFALEVASAGVSLPLKLVRQYKKNIGRTLKIKTAT-----QTIEALLLE 109

Query: 138 TSETGFFLE---KEKRGEKDMNELQIA---ISFDSLLSARLIV 174
            S+    +E   +E +      E  +    I++ ++  A +I+
Sbjct: 110 VSDQDITVEWSSREPKKIGKGKETVVHNEKIAYAAIQEAIVII 152


>gi|110005299|emb|CAK99623.1| conserved hypothetical upf0090 protein [Spiroplasma citri]
          Length = 160

 Score = 70.9 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 62/155 (40%), Gaps = 6/155 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +   ++  + + +     I+  ++    ++Q+ +E       L     +S+ I+ ++
Sbjct: 8   ETQLKETLENYLTKQNLTLFAINYFQDFDTNVVQVLIEDKTTVFDLERLTVISEEINQLV 67

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS- 139
           D  ++    Y LEVS+PG +RP+   ++  +     V  E      +  ++ G++     
Sbjct: 68  DNLDLFSEEYLLEVSTPGAERPLRNWNELQQHLKGYVYLEFNEKVNNLVEVTGELSMVDQ 127

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    +    +G +   +      + ++  AR  V
Sbjct: 128 QQNLTITYFVKGARKTLQTN----YQNIKFARCAV 158


>gi|91217186|ref|ZP_01254148.1| hypothetical protein P700755_04298 [Psychroflexus torquis ATCC
           700755]
 gi|91184786|gb|EAS71167.1| hypothetical protein P700755_04298 [Psychroflexus torquis ATCC
           700755]
          Length = 157

 Score = 70.5 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 67/147 (45%), Gaps = 17/147 (11%)

Query: 34  EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLE 93
           E+ +   + + + ++ N  + + ++ D  ++++ DC  +S+AI   LD E  IE  + LE
Sbjct: 18  EDEALFLIDLQISDKNN--INVIIDGDR-DLSITDCVNMSRAIEHNLDRE--IED-FSLE 71

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEK 153
           V+S G   P+     F +  G  +A E        + +   +   S+    L+   +  K
Sbjct: 72  VASCGATEPLKFPRQFKKNIGRKLAVE-----SQNESIEATLTAASDEDIELKWTAKEPK 126

Query: 154 DMN------ELQIAISFDSLLSARLIV 174
            +       E +  I+++ +  A++I+
Sbjct: 127 PIGKGKHKVEKEAKIAYEDIDKAQVII 153


>gi|307718806|ref|YP_003874338.1| hypothetical protein STHERM_c11200 [Spirochaeta thermophila DSM
           6192]
 gi|306532531|gb|ADN02065.1| hypothetical protein STHERM_c11200 [Spirochaeta thermophila DSM
           6192]
          Length = 182

 Score = 70.5 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 15/148 (10%)

Query: 31  PVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P++E+M +  V++ L        L+I +     ++++ DC  + + + P      +    
Sbjct: 42  PLLEKMGYALVELHLRYRRGGAALEIVIHGA--HLSVDDCARVLRLLKPKA-QLLLDLAD 98

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
             +EV SPGIDR +  + +   + G  +     L +  ++   G +   +E    L K  
Sbjct: 99  LHMEVMSPGIDRVLKNRDELALFVGKGLKL---LDTRSQRWEGGILEAVTEDHVVLRK-- 153

Query: 150 RGEKDMNELQIAISFDSLLSARLIVTDE 177
                    + +I  DS+  A+L  T E
Sbjct: 154 ------GAERRSIPIDSIGKAKLDFTQE 175


>gi|225011159|ref|ZP_03701621.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-3C]
 gi|225004721|gb|EEG42681.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-3C]
          Length = 153

 Score = 70.1 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 18/158 (11%)

Query: 22  AGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
             ++  ++   +EE  S   +   +  +K   + + ++ D G +TL+DC  +S+AI   L
Sbjct: 3   EKEVRILLDAALEENPSLFLIDFKVTTDKK--ISVVLDGDTG-VTLQDCMNVSRAIEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E I  G   L+V+S G   P+V    + +     +         + + + G ++   +
Sbjct: 60  DKETIDFG---LDVASAGATTPLVMPRQYKKNLQRSLTVRT-----ENEVVEGNLIQILD 111

Query: 141 TGFFLEKEKRGEKDMNELQI------AISFDSLLSARL 172
            G  L+ + R  K + + ++       I+F  +  A++
Sbjct: 112 HGIVLQWKAREPKPIGKGKVTVTKEQEIAFTDIKEAKV 149


>gi|298372249|ref|ZP_06982239.1| conserved hypothetical protein [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275153|gb|EFI16704.1| conserved hypothetical protein [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 152

 Score = 69.7 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 66/154 (42%), Gaps = 16/154 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I   I+  +       V +S+  +  ++++  ++ +  ++ L  C EL++ I    D + 
Sbjct: 7   IRQTIEEKLASTDCFLVSLSISGDNQIMVE--IDSET-SVDLDFCVELTRYIEQHFDRD- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LE+ S  I +P V +  + +  G  V         + +K+ G ++     GF 
Sbjct: 63  --AEDYSLEIGSYSITKPFVDRRQYRKNIGRKVEVLT----EESRKIRGTLVAVDNDGFT 116

Query: 145 LEKEKR------GEKDMNELQIAISFDSLLSARL 172
           LE E++        K + + +I + + S+   +L
Sbjct: 117 LEIEEKELVEGQKRKKLVKKEITLLYSSVKQTKL 150


>gi|315185929|gb|EFU19693.1| protein of unknown function DUF150 [Spirochaeta thermophila DSM
           6578]
          Length = 160

 Score = 69.3 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 15/148 (10%)

Query: 31  PVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P++E+M +  V++ L        L+I +     ++++ DC  + + + P   +   +   
Sbjct: 20  PLLEKMGYALVELHLRYRRGGAALEIVIHGA--HLSVDDCARVLRLLKPKAQLLLDLADL 77

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
             +EV SPGIDR +  + +   + G  +     L +  ++   G +   +E    L K  
Sbjct: 78  -HMEVMSPGIDRVLKNRDELALFVGKGLKL---LDTRSQRWEGGILEAVTEDHVVLRK-- 131

Query: 150 RGEKDMNELQIAISFDSLLSARLIVTDE 177
                    + +I  DS+  A+L  T E
Sbjct: 132 ------GAERRSIPIDSIGKAKLDFTQE 153


>gi|300858701|ref|YP_003783684.1| hypothetical protein cpfrc_01284 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686155|gb|ADK29077.1| hypothetical protein cpfrc_01284 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206411|gb|ADL10753.1| Ribosome maturation factor rimP [Corynebacterium pseudotuberculosis
           C231]
 gi|302330967|gb|ADL21161.1| Ribosome maturation factor rimP [Corynebacterium pseudotuberculosis
           1002]
 gi|308276654|gb|ADO26553.1| Ribosome maturation factor rimP [Corynebacterium pseudotuberculosis
           I19]
          Length = 184

 Score = 68.9 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 20/166 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQ-IFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +I P+    +     I +       L  I ++ D+    L   E +S AIS + D +
Sbjct: 9   LTELITPIAAAHNMDLEHIRVNRAGKKTLVAISLDSDNRP-DLDQLEVVSTAISELFDAQ 67

Query: 84  NI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
                      Y LEV +PGID P+     +      +V  E       K+ +      +
Sbjct: 68  EASGALSFGPGYTLEVGTPGIDVPLTTARQWRGNRHRLVVLE----VEGKKSVERIGAVS 123

Query: 139 SETGFFLEKEKRGEK---------DMNELQIAISFDSLLSARLIVT 175
            +    +  +++G K         +  +  + I F     A L  T
Sbjct: 124 DDETRVIVVKRQGRKISVRSIELGENTQAVVEIEFAKPAEAELEFT 169


>gi|15639878|ref|NP_219328.1| hypothetical protein TP0893 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026116|ref|YP_001933888.1| hypothetical protein TPASS_0893 [Treponema pallidum subsp. pallidum
           SS14]
 gi|51316577|sp|O83863|RIMP_TREPA RecName: Full=Ribosome maturation factor rimP
 gi|3323211|gb|AAC65850.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018691|gb|ACD71309.1| hypothetical protein TPASS_0893 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291060252|gb|ADD72987.1| hypothetcal protein [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 156

 Score = 68.6 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 23/151 (15%)

Query: 30  QPVIEEMSFRSVQISL--------LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             V+  +    V +          +++     +  +    G +TL  C  + + + P L 
Sbjct: 15  AEVVRSLGCALVDLQWSVSAVSRRVQQAQGRARAVIYSA-GGVTLDVCARVHRILVPRLQ 73

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
               +   + LEV SPG +R +   ++F  + G  V           Q  +G +    ET
Sbjct: 74  ALGGVRTVF-LEVGSPG-ERVIRNAAEFSIFLGETVKVWFCT----GQFQVGTLAFADET 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              L            + + I +  L  A+L
Sbjct: 128 CLTL--------TAGGVPVTIPYVQLTKAQL 150


>gi|25028437|ref|NP_738491.1| hypothetical protein CE1881 [Corynebacterium efficiens YS-314]
 gi|23493722|dbj|BAC18691.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 192

 Score = 68.6 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 13/138 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A +++++I PV+         + + +      + I ++ D     L   E +SQ I  + 
Sbjct: 16  AEELTALIAPVVATRHLDVEGLRVTKAGPKSTVAIKLDSDSRP-DLDLLEVVSQEIGELF 74

Query: 81  DVENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL--IG 133
           D             Y LEVS+PG+D P+ +   + R    +V+ +       K+++  IG
Sbjct: 75  DAAEARGELSFGAGYLLEVSTPGVDMPLTQPRHWRRNRTRLVSLD----VDGKKRIARIG 130

Query: 134 KIMGTSETGFFLEKEKRG 151
            +         +E+ K+ 
Sbjct: 131 ALNAEETAVILIERNKKA 148


>gi|260905193|ref|ZP_05913515.1| putative uncharacterized Bcr YhbC family protein [Brevibacterium
           linens BL2]
          Length = 154

 Score = 68.2 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG---NMTLRDCEELSQAIS 77
              I  +++  ++   F    +  +   +   L + V+ D+     M++    E S+ + 
Sbjct: 5   VAQIEELLREPLQASGFYLESVKAVAAGQRRALTVVVDLDESSTEPMSMDKIAESSRLVG 64

Query: 78  PILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             LD   +     Y+LEV+SPG  R +     F R  G  +          K      + 
Sbjct: 65  DTLDEVEVFRDKPYQLEVTSPGATRKLEAPRHFKRVLGRRLEISTK-----KDTFKLDLD 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +          G    +  +  +    ++ A++ +
Sbjct: 120 DVGDHSI------SGIDPASREKRTVKLGDIVKAQVEL 151


>gi|78779968|ref|YP_398080.1| hypothetical protein PMT9312_1584 [Prochlorococcus marinus str. MIT
           9312]
 gi|91208012|sp|Q318Q1|RIMP_PROM9 RecName: Full=Ribosome maturation factor rimP
 gi|78713467|gb|ABB50644.1| Protein of unknown function DUF150 [Prochlorococcus marinus str.
           MIT 9312]
          Length = 155

 Score = 67.8 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 65/149 (43%), Gaps = 2/149 (1%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELSQAISPIL 80
             + ++++ V   + ++   ++L   +N ++   + +      ++L DC   +   S  +
Sbjct: 7   SRLENLLEKVANVLDYKICSVNLQTNQNPIVIKIIIKKTNGDDISLDDCALFNTPASEEI 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +  N+++  Y LE+SS G+   +  + DF  + G  V  E+   +   + L G +   S+
Sbjct: 67  ENSNLLKCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSKIKFLNGLLYEKSK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLS 169
               +  + + +K      + IS  +L  
Sbjct: 127 DYLAINIKGKIKKIPFNEVLKISLCTLKD 155


>gi|258647227|ref|ZP_05734696.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
 gi|260852980|gb|EEX72849.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
          Length = 155

 Score = 67.8 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 61/152 (40%), Gaps = 20/152 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--DV 82
           +  +++  ++   +    +++  +  ++++  ++  +G + + DC +LS+ I   L  D 
Sbjct: 7   VKQLVEEWLDGKDYFLTDLTVSPDDRIVVE--MDHVEG-VWIEDCVDLSRYIEERLNRDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+     Y LEV S GI +P      +       V        G+ +KL G +       
Sbjct: 64  ED-----YELEVGSAGIGQPFKVHRQYEIHVDSPVVVLT----GEGKKLRGILTAVESDH 114

Query: 143 FFLEKEKRGEKDMN------ELQIAISFDSLL 168
           F L  +++   +        +  +   F+ + 
Sbjct: 115 FILTIKEKVRPEGAKRPQWVDKDLTFRFEDVK 146


>gi|259507496|ref|ZP_05750396.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|34223119|sp|Q8FPA4|RIMP_COREF RecName: Full=Ribosome maturation factor rimP
 gi|259164881|gb|EEW49435.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 182

 Score = 67.4 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 13/138 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A +++++I PV+         + + +      + I ++ D     L   E +SQ I  + 
Sbjct: 6   AEELTALIAPVVATRHLDVEGLRVTKAGPKSTVAIKLDSDSRP-DLDLLEVVSQEIGELF 64

Query: 81  DVENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL--IG 133
           D             Y LEVS+PG+D P+ +   + R    +V+ +       K+++  IG
Sbjct: 65  DAAEARGELSFGAGYLLEVSTPGVDMPLTQPRHWRRNRTRLVSLD----VDGKKRIARIG 120

Query: 134 KIMGTSETGFFLEKEKRG 151
            +         +E+ K+ 
Sbjct: 121 ALNAEETAVILIERNKKA 138


>gi|227488650|ref|ZP_03918966.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227091544|gb|EEI26856.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 180

 Score = 67.4 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 54/142 (38%), Gaps = 13/142 (9%)

Query: 37  SFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG-----HY 90
               +++  +E   +  + + V+ +     +    E S A+S + D +   +       Y
Sbjct: 21  GLFPLRVKTVEAGPHSTVTVIVDSESDP-DIDAVGEFSTALSQVFDEKEASKELSFGAGY 79

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV--LSSGDKQKLIGKIMGTSETGFFLEKE 148
            LEVS+PGID P+ R   + R  G  V   +     +  +   IG +    E    L   
Sbjct: 80  NLEVSTPGIDEPLTRPYQWARNRGRAVTVTLKGQEPATYR---IGAL-SPEEDRVVLIYS 135

Query: 149 KRGEKDMNELQIAISFDSLLSA 170
           +  + +    +  ++   +  A
Sbjct: 136 EGTKGNKKAKKTIVALHDVKRA 157


>gi|296117672|ref|ZP_06836256.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
           20306]
 gi|295969403|gb|EFG82644.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
           20306]
          Length = 179

 Score = 67.4 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 14/146 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +   + P++ +      QI   +  K   + I ++ +    +    EE+S+ I    
Sbjct: 6   EQKLEDFLTPILAKHDLDVEQIKTTKAGKKSQVVIRIDGEKRP-SSDVLEEMSRTIGDAF 64

Query: 81  DVENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D             Y LEVS+PG+D P+     F R  G  +   +       +  IG +
Sbjct: 65  DAAEEAGELNFGAGYTLEVSTPGVDLPLTAPRHFRRNRGRKIKSSL------GEVRIGAL 118

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIA 161
               E    +    R    +   ++ 
Sbjct: 119 -SEDEQNVIVVTSARDIAKVQVQRLE 143


>gi|156319550|ref|XP_001618133.1| hypothetical protein NEMVEDRAFT_v1g225486 [Nematostella vectensis]
 gi|156197569|gb|EDO26033.1| predicted protein [Nematostella vectensis]
          Length = 271

 Score = 67.0 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 55/112 (49%), Gaps = 7/112 (6%)

Query: 19  MGLAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  ++   ++E      + + + E     + I ++ D+G ++L+DC ++S+ + 
Sbjct: 1   MTFKEKVEKLLDAAILERDHLFLIDLKIDEANK--INIVLDGDNG-VSLQDCVDISRLVE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
             LD E   E  + LEV+S G+  P+     + +  G  +  ++V+ + +++
Sbjct: 58  QDLDRE---ENDFSLEVASAGLSSPLKLVRQYKKNIGRKLKAKVVVEAKEEK 106


>gi|33862047|ref|NP_893608.1| hypothetical protein PMM1491 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|51316771|sp|Q7V002|RIMP_PROMP RecName: Full=Ribosome maturation factor rimP
 gi|33634265|emb|CAE19950.1| DUF150 [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
          Length = 155

 Score = 66.6 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 68/152 (44%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGN-MTLRDCEELSQAISPIL 80
            ++ S++Q V +E + +   + +L  +N + ++I + + + + +TL DC   +     ++
Sbjct: 7   SNLESLLQGVAKEFNLKIHSLDILTNQNPIIVKIIICKTNKDDITLDDCSRFNNPAISVI 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +  N++   Y LE+SS G+   +  + DF  + G  V  E+   +   + L G +   S+
Sbjct: 67  ENSNLLNCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSQIKFLNGLLYEKSK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                        ++      I F+ +L   L
Sbjct: 127 DYL--------AINIKGKIKKIPFNEVLKVSL 150


>gi|189345842|ref|YP_001942371.1| hypothetical protein Clim_0298 [Chlorobium limicola DSM 245]
 gi|226703665|sp|B3EFA9|RIMP_CHLL2 RecName: Full=Ribosome maturation factor rimP
 gi|189339989|gb|ACD89392.1| protein of unknown function DUF150 [Chlorobium limicola DSM 245]
          Length = 176

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 65/170 (38%), Gaps = 19/170 (11%)

Query: 19  MGLAGDISSVIQPVIE------EMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEE 71
           + +   I + +   +E            V + +        ++I ++ D G + +  C  
Sbjct: 2   VSMEEKIKACVLQALESAAGTKGEGVYLVSVRVKGAGKQTKIEILLDSDTG-IRIDQCSF 60

Query: 72  LSQAISPILDVEN----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
            S+ I  +L+ E     +    + L VSSPG+  P++    +LR  G ++          
Sbjct: 61  FSRRIRELLENEGGTPVLDGEDFDLMVSSPGLGEPLLMPRQYLRHTGRLLRVIWKDEQQS 120

Query: 128 KQKLIGKIMGT-----SETGFFLEKEKRGEKDMNELQ--IAISFDSLLSA 170
           ++ + G++          T   L   K G+K    +Q  I +  D ++ A
Sbjct: 121 EKTVTGRLQQVLKTEGEITAVRLVPVKTGKKSAGNVQEPIELMLDCIVRA 170


>gi|227543253|ref|ZP_03973302.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227181062|gb|EEI62034.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 180

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 37  SFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG-----HY 90
               +++  +E   +  + + V+ +     +    E S A+S + D +   +       Y
Sbjct: 21  GLFPLRVKTVEAGPHSTVTVIVDSESDP-DIDAVGEFSTALSQVFDEKEASKELSFGAGY 79

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV--LSSGDKQKLIGKIMGTSETGFFLEKE 148
            LEVS+PGID P+ R   + R  G  V+  +     +  +   IG +    E    L   
Sbjct: 80  NLEVSTPGIDEPLTRPYQWARNRGRAVSVTLKGQEPATYR---IGAL-SPEEDRVVLIYS 135

Query: 149 KRGEKDMNELQIAISFDSLLSA 170
           +  + +    +  ++   +  A
Sbjct: 136 EGTKGNKKAKKTIVALHDVERA 157


>gi|254369912|ref|ZP_04985920.1| predicted protein [Francisella tularensis subsp. tularensis FSC033]
 gi|151568158|gb|EDN33812.1| predicted protein [Francisella tularensis subsp. tularensis FSC033]
          Length = 81

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 7/83 (8%)

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LEVSSPG++R +          G  V    +   G + K  G +         L  E 
Sbjct: 1   YILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEGNNVILNLED 60

Query: 150 RGEKDMNELQIAISFDSLLSARL 172
             E       I+  FD L   R+
Sbjct: 61  GKE-------ISFDFDELKKLRV 76


>gi|123966904|ref|YP_001011985.1| hypothetical protein P9515_16711 [Prochlorococcus marinus str. MIT
           9515]
 gi|166980184|sp|A2BYL7|RIMP_PROM5 RecName: Full=Ribosome maturation factor rimP
 gi|123201270|gb|ABM72878.1| DUF150 [Prochlorococcus marinus str. MIT 9515]
          Length = 155

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 70/149 (46%), Gaps = 2/149 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD--DGNMTLRDCEELSQA 75
           D  L  ++  +++ V +E + +   ++LL  +N ++   + +   + ++T+ DC   +  
Sbjct: 2   DKELKNNLEILLEEVAKEFNLKVYSLNLLTNQNPIIIKIIIKKTNEEDITIEDCSRFNNP 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            S +++  N+++  Y LE+SS G+   +  + DF  + G  V  E+   +   + L G +
Sbjct: 62  ASAVIENSNLLKCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSRIKLLNGLL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISF 164
              S+    +  + + +K      + IS 
Sbjct: 122 YEKSKDYLAINIKGKIKKIPFNEVLKISL 150


>gi|194333209|ref|YP_002015069.1| hypothetical protein Paes_0365 [Prosthecochloris aestuarii DSM 271]
 gi|259586180|sp|B4S4S4|RIMP_PROA2 RecName: Full=Ribosome maturation factor rimP
 gi|194311027|gb|ACF45422.1| protein of unknown function DUF150 [Prosthecochloris aestuarii DSM
           271]
          Length = 179

 Score = 65.9 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 63/144 (43%), Gaps = 14/144 (9%)

Query: 40  SVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY----RLEV 94
            V +++      + +++ V+ + G + +  C  LS+ I  +++ ++ ++  Y     L V
Sbjct: 31  LVDLAVKAAGRSVKIEVLVDSEQG-IVISQCAALSRRIRDMIESDDELQEVYGEVFELMV 89

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS-----ETGFFLEKEK 149
           SSPG+  P+     ++R  G +++      +G    + G+++        E    LE  +
Sbjct: 90  SSPGLGGPIRHVRQYIRHTGRLLSVRYRDDAGSVHDVTGRLIEVDLAEGHEPFLVLEPVR 149

Query: 150 RGEKD---MNELQIAISFDSLLSA 170
            G K    +   ++ +  D +  A
Sbjct: 150 SGRKKNGSLPPSRLKMMLDRIDKA 173


>gi|4455675|emb|CAB36567.1| hypothetical protein MLCB596.11 [Mycobacterium leprae]
          Length = 122

 Score = 65.5 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
             LS ++S +LD  + I   Y LEVSS G+ RP   +  F R  G  V  
Sbjct: 28  ATLSHSVSALLDGLDNIVDRYFLEVSSLGMGRPFTSEKHFRRARGRKVEL 77


>gi|218509056|ref|ZP_03506934.1| hypothetical protein RetlB5_16765 [Rhizobium etli Brasil 5]
          Length = 83

 Score = 65.5 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 119 CEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDEL 178
           CE  +   ++++  GKI+     GF LE+++       E +++I F +L  A+LI+TD+L
Sbjct: 1   CETSIMICNRKRFRGKIVEADADGFTLERDQIAY--GEEPKVSIPFTALSDAKLILTDDL 58

Query: 179 LRASLNNYG 187
           +R +L    
Sbjct: 59  IRDALRADK 67


>gi|323342030|ref|ZP_08082263.1| hypothetical protein HMPREF0357_10443 [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322464455|gb|EFY09648.1| hypothetical protein HMPREF0357_10443 [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 143

 Score = 65.1 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 12/148 (8%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
             I+P  E +    +   L+  + L L I   +D   + L  C +  +A    LD E  I
Sbjct: 6   EKIKPTAEALGLDIIDAELISNELLELSI-ARKDFKPVDLEICAKAGEAFGEALDYE--I 62

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
                L+V S G +R ++ + D+       V  +          + G ++   E    + 
Sbjct: 63  G----LDVGSAGAERVIL-EEDYDNVVDQYVLIKFKNPIQGADYVEGTVISVDENEVVVS 117

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLIV 174
             ++        +IAI   ++   RL V
Sbjct: 118 YRQKTALK----KIAIERLNIKMLRLAV 141


>gi|152965408|ref|YP_001361192.1| hypothetical protein Krad_1440 [Kineococcus radiotolerans SRS30216]
 gi|189038696|sp|A6W7Y9|RIMP_KINRD RecName: Full=Ribosome maturation factor rimP
 gi|151359925|gb|ABS02928.1| protein of unknown function DUF150 [Kineococcus radiotolerans
           SRS30216]
          Length = 208

 Score = 64.7 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
           + G++ L      S A+S  LD   ++    Y LEVSSPG+DRP+     + R  G +V 
Sbjct: 52  EPGDLDLDAVAAASTAVSEALDESGVLGEAPYTLEVSSPGVDRPLTTPRHWSRARGRLVR 111

Query: 119 CEIVLSSGDKQKLIGKIMGTSETGF--FLEKEKRGEKDMNELQIAISFD 165
             +     D   L+ +++   E G    LE +    K      +    D
Sbjct: 112 AVLT----DGTALLVRVVSVDEAGVHGTLEPQMVKGKPPRAKDVGAPRD 156


>gi|325971225|ref|YP_004247416.1| ribosome maturation factor rimP [Spirochaeta sp. Buddy]
 gi|324026463|gb|ADY13222.1| Ribosome maturation factor rimP [Spirochaeta sp. Buddy]
          Length = 166

 Score = 64.7 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 58/148 (39%), Gaps = 13/148 (8%)

Query: 30  QPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQ----AISPILDVEN 84
           +P++  M    V+I+ ++  N + + + +   +  +++  C ++ +     +   L   +
Sbjct: 16  EPLLNAMGIALVEINRVDRGNSVIVTMVIVAKETEVSIDHCAKVYRLAYPRMELQLGERD 75

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           +     +LEVS+PG+ R      +F  + G                + G I    E    
Sbjct: 76  L-----QLEVSTPGLQRTFKDVYEFSLFTGKRARVYDTSKEA---WVSGIITQADEKTVQ 127

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARL 172
           L +    ++      +++ F  +  A+L
Sbjct: 128 LAQVYIEDEKEMIDTMSVEFSVIQKAKL 155


>gi|50365107|ref|YP_053532.1| hypothetical protein Mfl291 [Mesoplasma florum L1]
 gi|81391892|sp|Q6F1H5|RIMP_MESFL RecName: Full=Ribosome maturation factor rimP
 gi|50363663|gb|AAT75648.1| unknown protein [Mesoplasma florum L1]
          Length = 164

 Score = 64.7 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVER---DDGNMTLRDCEELSQA 75
            +  +I  + + +++E + +  +I+   + ++ +LQI VE     +  +        ++ 
Sbjct: 6   SIKDEIQKIAESILKEYNLQIYEINNFFDFESDVLQILVEDITEPNKALDFDSIISSNEK 65

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  L+    +   Y LEV+S GI++P+  K + ++     +  E+        ++ G +
Sbjct: 66  LSDALENFPGLSEPYMLEVASAGIEKPIRSKDELVKAVNSYIHVELNQEKNTSSEIEGIL 125

Query: 136 MGTS--ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +     +  F +    +G+K     ++   ++ +  AR  V
Sbjct: 126 LDFDVNKDTFRITYFLKGQKK----KVDFKYEQVKFARYAV 162


>gi|291513590|emb|CBK62800.1| Uncharacterized protein conserved in bacteria [Alistipes shahii WAL
           8301]
          Length = 155

 Score = 63.9 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 14/132 (10%)

Query: 43  ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           +         +++ ++ D  ++ +  C ELS+A+    D +   E  + L V S GI   
Sbjct: 23  VECTSTPGNEIELTIDSDT-SVGIDACAELSRAVEAQFDRD---EEDFSLTVMSAGIGSE 78

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE------KEKRGEKDMN 156
           +     + +  G      +        K++ K+   ++ G  L        E + +K + 
Sbjct: 79  LKSLRQYRKLAGKSAEVLLTSGV----KILAKLEEVTDEGITLSYEEKQAVEGKKKKQLV 134

Query: 157 ELQIAISFDSLL 168
           ++  +  FD + 
Sbjct: 135 KVTRSYPFDQIK 146


>gi|167751797|ref|ZP_02423924.1| hypothetical protein ALIPUT_00038 [Alistipes putredinis DSM 17216]
 gi|167660038|gb|EDS04168.1| hypothetical protein ALIPUT_00038 [Alistipes putredinis DSM 17216]
          Length = 155

 Score = 63.9 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 16/152 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             I+ +    +       V  +        +++ ++ D  ++ +  C ELS+AI    D 
Sbjct: 5   TKITEIANAKLVGTDLFVVDCTCSPANE--VELLIDSDT-SVGIETCVELSRAIEAEFDR 61

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +      + L V+S GI   +     + +  G  V   +        K++  +    + G
Sbjct: 62  D---TEDFSLTVASAGIGSELKHLRQYRKLIGKPVEVLLKSGV----KILATLDEADQEG 114

Query: 143 FFLE------KEKRGEKDMNELQIAISFDSLL 168
             L        E +  K    +     F  + 
Sbjct: 115 LTLSYEEKQAVEGKKRKQTVRVTRRYPFSEIK 146


>gi|238783517|ref|ZP_04627539.1| hypothetical protein yberc0001_8610 [Yersinia bercovieri ATCC
           43970]
 gi|238797554|ref|ZP_04641051.1| hypothetical protein ymoll0001_5240 [Yersinia mollaretii ATCC
           43969]
 gi|238715572|gb|EEQ07562.1| hypothetical protein yberc0001_8610 [Yersinia bercovieri ATCC
           43970]
 gi|238718551|gb|EEQ10370.1| hypothetical protein ymoll0001_5240 [Yersinia mollaretii ATCC
           43969]
          Length = 66

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 8/71 (11%)

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
           M     + R+ G  V   + ++  +++K  G I         +  + + E          
Sbjct: 1   MFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTVDGKDEV--------F 52

Query: 163 SFDSLLSARLI 173
           +  ++  A L+
Sbjct: 53  ALSNIQKANLV 63


>gi|294675007|ref|YP_003575623.1| hypothetical protein PRU_2369 [Prevotella ruminicola 23]
 gi|294474084|gb|ADE83473.1| conserved hypothetical protein [Prevotella ruminicola 23]
          Length = 155

 Score = 63.2 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 60/156 (38%), Gaps = 16/156 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I ++ +  ++   +  V ++   +  ++  I ++  DG + + DC  LS+ +   L  E 
Sbjct: 7   IQTLTEEWLQGNEYFLVDVNFAADDRIV--IEIDHADG-VWIEDCAALSRFLQERLGEEL 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                    V S G+ +P      ++   G  +         D +K+ G +       F 
Sbjct: 64  GEYELE---VGSAGLGQPFKVAQQYMNHIGDTLEV----LQADGKKVQGTLKAVDAPSFT 116

Query: 145 LEKEKRGEKDMNELQIAIS------FDSLLSARLIV 174
           +  +++ + +  +  + +        D +  A+ ++
Sbjct: 117 ITVQEKQKIEGKKRPVLVDVDKTYQMDEVKYAKYVL 152


>gi|51599051|ref|YP_073239.1| hypothetical protein BG0825 [Borrelia garinii PBi]
 gi|81609733|sp|Q65ZX4|RIMP_BORGA RecName: Full=Ribosome maturation factor rimP
 gi|51573622|gb|AAU07647.1| conserved hypothetical protein [Borrelia garinii PBi]
          Length = 145

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++++    +    +QI +   D ++ +    +L + I  IL+ 
Sbjct: 10  EVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKDFSLGIDLLTDLHKMILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              +E  + LE+S+PGIDR +    +F  + G  +   +                  E G
Sbjct: 70  S--LEYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDNEF--------------EEG 113

Query: 143 FFLEKEKRG-EKDMNELQIAISFDSLLSARLI 173
           F LE + +         ++ +S+  +  ARL+
Sbjct: 114 FILESKSKSFIFKTESKELNVSYSDVKKARLV 145


>gi|172040526|ref|YP_001800241.1| hypothetical protein cur_0847 [Corynebacterium urealyticum DSM
           7109]
 gi|226708097|sp|B1VGB7|RIMP_CORU7 RecName: Full=Ribosome maturation factor rimP
 gi|171851830|emb|CAQ04806.1| conserved hypothetical protein [Corynebacterium urealyticum DSM
           7109]
          Length = 196

 Score = 62.4 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 15/131 (11%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   + ++      +      +++         ++I V+ D+    L   EE SQ I   
Sbjct: 5   LDEKLRALAADEAMKCGLDVEKLTFTRAGAKSSVKIAVDADERP-DLDLLEEASQLIGAA 63

Query: 80  LDVEN-----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            D         +   Y LEV++PG+D P+    +F R  G +         G K    G+
Sbjct: 64  FDAAEEAQQIDLGPSYTLEVTTPGLDFPLREARNFQRNIGRLANL----PGGGK----GR 115

Query: 135 IMGTSETGFFL 145
           I         +
Sbjct: 116 IAAVENDEVAI 126


>gi|78187635|ref|YP_375678.1| hypothetical protein Plut_1781 [Chlorobium luteolum DSM 273]
 gi|78167537|gb|ABB24635.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 191

 Score = 62.4 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 69/174 (39%), Gaps = 18/174 (10%)

Query: 14  RIFGDMGLAGDISSVIQPVIEE------MSFRSVQISLLEEK-NLLLQIFVERDDGNMTL 66
            I     +   I  ++Q ++E+           V +++     +  +++ ++ D G + +
Sbjct: 13  FIAMQGSIDSHIEGIVQNILEDSVGTKGEGVYLVAMTVKGSAVHRKIEVILDADSG-VRI 71

Query: 67  RDCEELSQAISPILDVENIIEG----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
             C   ++ I   L+ +  + G     + L V SPG+  P+V +  + R  G ++     
Sbjct: 72  DQCSFFARRIRERLEEDEALSGTMGEDFDLVVGSPGLGEPLVLRRQYGRHVGRLLRVWYR 131

Query: 123 LSSGDKQKLIGKIMGTS----ETGFFLEKEKRGEKDMNELQ--IAISFDSLLSA 170
            + G + ++ G +   S         L+ +   +K   E    + +  D++  A
Sbjct: 132 DTEGVEHEVAGHLQAVSLTEGGGSITLKPQTAKKKGRQEETEDMTLELDAVSRA 185


>gi|38234061|ref|NP_939828.1| hypothetical protein DIP1480 [Corynebacterium diphtheriae NCTC
           13129]
 gi|51316647|sp|Q6NGM9|RIMP_CORDI RecName: Full=Ribosome maturation factor rimP
 gi|38200323|emb|CAE50008.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
          Length = 184

 Score = 62.0 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 20/166 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++ ++ PV+ + +     I + +  K  L+ + V+ D     L   E +S  IS + D  
Sbjct: 9   LTELVTPVVAQHNMDLEGIRINKAGKKSLVAVSVDSDFRP-DLDQLELVSNQISEVFDAG 67

Query: 83  ----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
               E      Y LEV +PG+D+P+     + R    +VA E       K+ +       
Sbjct: 68  EAAGELSFGAGYTLEVGTPGLDQPLASARRWRRNRHRLVALE----VEGKKSVERIGALN 123

Query: 139 SETGFFLEKEKRGEK---------DMNELQIAISFDSLLSARLIVT 175
            +    +  ++RG+K         +  +  + I F       L +T
Sbjct: 124 DDETAVIVVKRRGKKLVVRSVQLAENTQAVVEIEFAKPAEDELALT 169


>gi|119356206|ref|YP_910850.1| hypothetical protein Cpha266_0367 [Chlorobium phaeobacteroides DSM
           266]
 gi|259585750|sp|A1BDE9|RIMP_CHLPD RecName: Full=Ribosome maturation factor rimP
 gi|119353555|gb|ABL64426.1| protein of unknown function DUF150 [Chlorobium phaeobacteroides DSM
           266]
          Length = 173

 Score = 62.0 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 60/149 (40%), Gaps = 13/149 (8%)

Query: 34  EEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE----G 88
           +      V +S+    K   +++ V+ D G + +  C  LS+ I   L+VE   +     
Sbjct: 20  KGEGVYLVSLSIKGSGKGTSIEVLVDTDTG-IRIDQCAFLSRRIRECLEVEEESDGMSGD 78

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT-----SETGF 143
            + L+V+SPG+ + ++ +  + R  G +         G   ++ G +             
Sbjct: 79  DFNLDVASPGLGKAIILQRQYARHVGRLFRVTFREEDGSMTEISGHLREILFPEEENASL 138

Query: 144 FLEK--EKRGEKDMNELQIAISFDSLLSA 170
            +E   +K+  K ++     +  D ++ A
Sbjct: 139 VIEPLGKKKAGKKVSSENRTLRLDRVIRA 167


>gi|313158655|gb|EFR58044.1| conserved hypothetical protein [Alistipes sp. HGB5]
          Length = 155

 Score = 62.0 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 16/156 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              I    +  ++      V  +        +++ ++ D  ++ +  C ELS+A+    D
Sbjct: 4   TKKIIEAAERKLQGTDMFVVGCTCTPGNE--IELLIDSDT-SVAIEACAELSRAVEAEFD 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            +   E  + L V+S GI   +     + +  G  V   +        K++ K+    + 
Sbjct: 61  RD---EEDFSLTVASAGIGSELKSLRQYRKLIGSTVEVLLNSGI----KMLAKLDAADDE 113

Query: 142 GFFLE------KEKRGEKDMNELQIAISFDSLLSAR 171
           G  +        E +  K +  +    +FD + S +
Sbjct: 114 GITISYEEKQAVEGKKRKQLVTVTRRYAFDEIKSTK 149


>gi|18409217|ref|NP_564954.1| unknown protein [Arabidopsis thaliana]
 gi|13937141|gb|AAK50064.1|AF372924_1 At1g69210/F4N2_11 [Arabidopsis thaliana]
 gi|22137004|gb|AAM91347.1| At1g69210/F4N2_11 [Arabidopsis thaliana]
 gi|332196773|gb|AEE34894.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 305

 Score = 61.6 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 61/175 (34%), Gaps = 23/175 (13%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPI 79
             + S+   V+++        +        + + +++   + G  T+ + EE S+     
Sbjct: 130 ERVLSIAAQVLKQSEKDLELFAFKTSPRGYIYVRLDKLSTEYGCPTMDELEEFSREFKKR 189

Query: 80  LD---VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI-G-- 133
           LD    E +I     LEVSSPG +R +    D  R+    +    V  +  ++ +  G  
Sbjct: 190 LDDAGAEKVIPEDLALEVSSPGAERLLRVPEDLPRFKDMPMTVSYVEETNSRKAVKSGVF 249

Query: 134 --------------KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                         K+    E      K +   +   +L+I + F       L +
Sbjct: 250 LLESIDAESDNCVWKLADVRENRDPESKGRPLSRKQKDLRITLPFADHKKINLYL 304


>gi|68536222|ref|YP_250927.1| hypothetical protein jk1145 [Corynebacterium jeikeium K411]
 gi|91208000|sp|Q4JV48|RIMP_CORJK RecName: Full=Ribosome maturation factor rimP
 gi|68263821|emb|CAI37309.1| conserved hypothetical protein [Corynebacterium jeikeium K411]
          Length = 191

 Score = 61.2 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 22/157 (14%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD---GNMTLRDCEELSQAISP 78
             +   ++ ++ E       I + +      ++I V+  D       L   EELS+ +S 
Sbjct: 9   EQLEDSLRGLVNEFGLLIEGIKITKAGAKSAIRIAVDTADPRAERPDLDQLEELSREVSK 68

Query: 79  ILDVENIIEGH-----YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            LD             Y LE+++PG+D P+V +  ++R  G +V       +G  ++   
Sbjct: 69  HLDDAEAAGEMSFGAGYTLELTTPGVDFPLVEQRHWVRNIGRLVRL-----AGGVER--- 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            I         L    + +  +  ++    F  +  A
Sbjct: 121 -IAQVEGEDVVLITPDKKQPSVRRVR----FADVAGA 152


>gi|119953576|ref|YP_945786.1| hypothetical protein BT0799 [Borrelia turicatae 91E135]
 gi|254806615|sp|A1R0M4|RIMP_BORT9 RecName: Full=Ribosome maturation factor rimP
 gi|119862347|gb|AAX18115.1| hypothetical cytosolic protein [Borrelia turicatae 91E135]
          Length = 143

 Score = 61.2 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 68/151 (45%), Gaps = 17/151 (11%)

Query: 23  GDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ ++I+ V +++    ++I +  +     +QI + + + +  +    +L + I   L+
Sbjct: 8   SEVYNLIKNVTDQLGIEIIEINTFKKRDEGRIQIVLYKGN-DFGVDTLCDLHKMILLSLE 66

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           V  +++ ++ LE+S+PGI+R +    +F  + G  +   +           G I+     
Sbjct: 67  V--VLKYNFSLEISTPGINRKIKSDREFKIFEGRKIKLMLDNDFE-----EGLILKAEAD 119

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           GF  + + +        +I I +  +  A+L
Sbjct: 120 GFIFKTDTK--------EIRILYSDVKKAKL 142


>gi|189499376|ref|YP_001958846.1| hypothetical protein Cphamn1_0400 [Chlorobium phaeobacteroides BS1]
 gi|259585749|sp|B3ELN6|RIMP_CHLPB RecName: Full=Ribosome maturation factor rimP
 gi|189494817|gb|ACE03365.1| protein of unknown function DUF150 [Chlorobium phaeobacteroides
           BS1]
          Length = 180

 Score = 61.2 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 12/133 (9%)

Query: 49  KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE----NIIEGHYRLEVSSPGIDRPMV 104
            +  +++  E D G +++  C  +++ +    +      N++   Y L VSSPGI  P+ 
Sbjct: 43  PSRRVEVLAETDSG-ISVTRCMSIARWLRNAFEENEEIRNLVGEDYGLMVSSPGIGEPIQ 101

Query: 105 RKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS--ETG---FFLEKEK--RGEKDMNE 157
               ++R  GH++      +   + ++ G+++     ET      LE EK  +G K    
Sbjct: 102 HARQYIRHKGHLLRVRYTDAGDAEHEVSGRLVEVEVVETTSPFIVLEPEKVSKGRKRERL 161

Query: 158 LQIAISFDSLLSA 170
             + +  + + SA
Sbjct: 162 EPVRLELNRIKSA 174


>gi|260578922|ref|ZP_05846825.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
           43734]
 gi|258602896|gb|EEW16170.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
           43734]
          Length = 191

 Score = 61.2 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 22/157 (14%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD---GNMTLRDCEELSQAISP 78
             +   ++ ++ E       I + +      ++I V+  D       L   EELS+ +S 
Sbjct: 9   EQLEDSLRGLVNEFGLLIEGIKITKAGAKSAIRIAVDTADPRAERPDLDQLEELSREVSK 68

Query: 79  ILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            LD      E      Y LE+++PG+D P+V +  ++R  G +V       +   ++   
Sbjct: 69  HLDDAEASGEMSFGAGYTLELTTPGVDFPLVEQRHWVRNIGRLVRL-----ADGVER--- 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            I         L    + +  +  ++    F  +  A
Sbjct: 121 -IAQVEGEDVVLITPDKKQPSVRRVR----FADVAGA 152


>gi|298706798|emb|CBJ29721.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 362

 Score = 61.2 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 55/158 (34%), Gaps = 22/158 (13%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--------MTLRDCEELSQAIS 77
             +++  ++        I     +   L++ V R +G+        +      +  + ++
Sbjct: 204 EKIVRDQVQACGLTCYDILWTFHR---LEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVN 260

Query: 78  PILD---VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
             L+    E  + G + L V++PG    +     F  + G  V  +       K++L GK
Sbjct: 261 AALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGK 320

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +     + K  R         + I    +   RL
Sbjct: 321 LLERTFDELMIMKAGRK--------VRIPLALVDEVRL 350


>gi|289810679|ref|ZP_06541308.1| hypothetical protein Salmonellaentericaenterica_42532 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 63

 Score = 60.8 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 8/68 (11%)

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
              + R+ G  VA  + ++  +++K  G I         +  E + E          +  
Sbjct: 1   ADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEV--------FALS 52

Query: 166 SLLSARLI 173
           ++  A L+
Sbjct: 53  NIQKANLV 60


>gi|187918653|ref|YP_001884219.1| hypothetical protein BH0799 [Borrelia hermsii DAH]
 gi|226708085|sp|B2S1E3|RIMP_BORHD RecName: Full=Ribosome maturation factor rimP
 gi|119861501|gb|AAX17296.1| hypothetical cytosolic protein [Borrelia hermsii DAH]
          Length = 143

 Score = 60.5 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 68/151 (45%), Gaps = 17/151 (11%)

Query: 23  GDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ ++I+ V + +    ++I +  +     +QI + + D +  +    +L + I  +L+
Sbjct: 8   SEVYNLIKNVTDRLGIEIIEINTFRKRGEGRVQIVLYKGD-DFGVDTLCDLHKMI--LLN 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +E +++ ++ LE+S+PGI+R +    +F  + G  +   +           G I+     
Sbjct: 65  LEAVLKYNFSLEISTPGINRKIKSDREFKIFEGKKIKLMLDNDFE-----EGFILKAGAD 119

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            F  + + +        ++ + +  +  A+L
Sbjct: 120 SFIFKTDNK--------EVKVLYSDVKKAKL 142


>gi|91208390|sp|Q3B1Z6|RIMP_PELLD RecName: Full=Ribosome maturation factor rimP
          Length = 176

 Score = 60.5 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 68/168 (40%), Gaps = 18/168 (10%)

Query: 20  GLAGDISSVIQPVIEE------MSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEEL 72
            +   I  ++Q ++E+           V +++     +  +++ ++ D G + +  C   
Sbjct: 4   SIDSHIEGIVQNILEDSVGTKGEGVYLVAMTVKGSAVHRKIEVILDADSG-VRIDQCSFF 62

Query: 73  SQAISPILDVENIIEG----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           ++ I   L+ +  + G     + L V SPG+  P+V +  + R  G ++      + G +
Sbjct: 63  ARRIRERLEEDEALSGTMGEDFDLVVGSPGLGEPLVLRRQYGRHVGRLLRVWYRDTEGVE 122

Query: 129 QKLIGKIMGTS----ETGFFLEKEKRGEKDMNELQ--IAISFDSLLSA 170
            ++ G +   S         L+ +   +K   E    + +  D++  A
Sbjct: 123 HEVAGHLQAVSLTEGGGSITLKPQTAKKKGRQEETEDMTLELDAVSRA 170


>gi|219685672|ref|ZP_03540486.1| conserved hypothetical protein [Borrelia garinii Far04]
 gi|219672788|gb|EED29813.1| conserved hypothetical protein [Borrelia garinii Far04]
          Length = 145

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++++    +    +QI +   + ++ +    +L + I  IL+ 
Sbjct: 10  EVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKNFSLGIDLLTDLHKIILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              +E  + LE+S+PGIDR +    +F  + G  +   +                  E G
Sbjct: 70  S--LEYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDNEF--------------EEG 113

Query: 143 FFLEKEKRG-EKDMNELQIAISFDSLLSARLI 173
           F LE + +         ++ + +  +  ARL+
Sbjct: 114 FILESKSKSFIFKTESKELNVFYSDVKKARLV 145


>gi|194335548|ref|YP_002017342.1| protein of unknown function DUF150 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|259586174|sp|B4SCE5|RIMP_PELPB RecName: Full=Ribosome maturation factor rimP
 gi|194308025|gb|ACF42725.1| protein of unknown function DUF150 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 173

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 61/130 (46%), Gaps = 12/130 (9%)

Query: 21  LAGDISSVIQPVIEE------MSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELS 73
           +   I++ +  V+ E           + I +  +     ++I ++ DDG + +  C  +S
Sbjct: 1   MQERINNCVTQVLAESAGTRGEGAYLIDIKVKGKGSGRKIEILMDADDG-IRIHQCAYIS 59

Query: 74  QAISPILDVEN----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + +   ++ ++    ++  ++ L VSSPG+  P++    ++R  G ++      S+GD  
Sbjct: 60  RRVRERIEGDDDLLELVGENFDLMVSSPGLGEPIIIPRQYIRHVGKLLQVTYADSNGDPV 119

Query: 130 KLIGKIMGTS 139
           +L+G +   S
Sbjct: 120 ELVGHLQEVS 129


>gi|219684915|ref|ZP_03539856.1| conserved hypothetical protein [Borrelia garinii PBr]
 gi|219671653|gb|EED28709.1| conserved hypothetical protein [Borrelia garinii PBr]
          Length = 145

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++++    +    +QI +   + ++ +    +L + I  IL+ 
Sbjct: 10  EVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKNFSLGIDLLTDLHKMILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              +E  + LE+S+PGIDR +    +F  + G  +   +                  E G
Sbjct: 70  S--LEYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDNEF--------------EEG 113

Query: 143 FFLEKEKRG-EKDMNELQIAISFDSLLSARLI 173
           F LE + +         ++ + +  +  ARL+
Sbjct: 114 FILESKSKSFIFKTESKELNVFYSDVKKARLV 145


>gi|319951027|ref|ZP_08024891.1| ribosome maturation protein RimP [Dietzia cinnamea P4]
 gi|319435307|gb|EFV90563.1| ribosome maturation protein RimP [Dietzia cinnamea P4]
          Length = 181

 Score = 59.7 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 14/165 (8%)

Query: 33  IEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           + +       I          + I V+ D G ++L D  +LS  + P+ +     +    
Sbjct: 15  VSDRGLDLEDIREDARSSAWRVTIVVDGDAG-VSLDDLADLSTDLDPLAEGWGGPDRPVT 73

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           LEV+S G+D P+ +   + R  G  V    V  +    +   ++    E    +      
Sbjct: 74  LEVTSRGVDAPLEQPRHWRRARGRQVDITYVQGAKGPAR--ARVGDLDEGAGVVRLVSGA 131

Query: 152 EKDMNELQIAISFDSLLSA------RLIVTDELLRASLNNYGSYA 190
            ++     +A+  D +  A      R    DEL    L+  G   
Sbjct: 132 GREKKVEPVAL--DQVAHAVIRVEFRPAPQDEL--DLLSEPGDPG 172


>gi|34540098|ref|NP_904577.1| hypothetical protein PG0253 [Porphyromonas gingivalis W83]
 gi|51316749|sp|Q7MXE6|RIMP_PORGI RecName: Full=Ribosome maturation factor rimP
 gi|34396409|gb|AAQ65476.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 152

 Score = 59.7 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 54/137 (39%), Gaps = 16/137 (11%)

Query: 40  SVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGI 99
            V++++     +L+++  +   G + + +C  LS+ I   +D +  IE  Y LEV S G+
Sbjct: 22  LVEVAIHPGNRILVEL--DSAQG-VCIDECVALSRHIESQVDRD--IED-YELEVGSTGL 75

Query: 100 DRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK------EKRGEK 153
             P+     +       ++  +       ++  G+++  +     LE       E    K
Sbjct: 76  TSPLKVMRQWENCIDSELSVLLT---NGMKE-TGRLITVAPEAIKLEVVRMVKPEGAKRK 131

Query: 154 DMNELQIAISFDSLLSA 170
                ++ I    +  A
Sbjct: 132 KPETQELTIVMADIKQA 148


>gi|15595144|ref|NP_212933.1| hypothetical protein BB0799 [Borrelia burgdorferi B31]
 gi|226320844|ref|ZP_03796396.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
 gi|2688749|gb|AAC67155.1| conserved hypothetical protein [Borrelia burgdorferi B31]
 gi|226233710|gb|EEH32439.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
          Length = 162

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 68/161 (42%), Gaps = 18/161 (11%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           +        ++ ++I+ +   ++   ++I+    + N  +QI +   + ++ +    +L 
Sbjct: 18  LIKYFDKNNEVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIVLYSKNFSLDIDFLTDLH 77

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + I  IL+    ++  + LE+S+PGIDR +    +F  + G  +   +            
Sbjct: 78  KMILLILEAN--LKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDNEF-------- 127

Query: 134 KIMGTSETGFFLEKEKRG-EKDMNELQIAISFDSLLSARLI 173
                 E GF LE + +      +  ++ + +  +  ARL+
Sbjct: 128 ------EEGFILESKPKSFIFKTDSKEVNVFYSDVKKARLV 162


>gi|216263349|ref|ZP_03435344.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
 gi|215980193|gb|EEC21014.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
          Length = 145

 Score = 59.3 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++I+    +    +QI +   + ++ +    +L + I  IL+ 
Sbjct: 10  EVYNLIKNLTERLNVEILEINIFRNKNGGKIQIVLYSKNFSLGIDLMTDLHKMILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              ++  + LE+S+PGIDR +    +F  + G  +   +                  E G
Sbjct: 70  N--LKYSFILELSTPGIDRKIKSDKEFQIFEGKKIKLMLDNEF--------------EEG 113

Query: 143 FFLEKEKRG-EKDMNELQIAISFDSLLSARLI 173
           F LE + +      +  ++ + +  +  ARL+
Sbjct: 114 FILEAKSKSFIFKTDNKELNVFYSDVKKARLV 145


>gi|188994217|ref|YP_001928469.1| hypothetical protein PGN_0353 [Porphyromonas gingivalis ATCC 33277]
 gi|259586179|sp|B2RHM7|RIMP_PORG3 RecName: Full=Ribosome maturation factor rimP
 gi|188593897|dbj|BAG32872.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 152

 Score = 59.3 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 16/137 (11%)

Query: 40  SVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGI 99
            V++++     +L+++  +   G + + +C  LS+ I   +D +      Y LEV S G+
Sbjct: 22  LVEVAIHPGNRILVEL--DSAQG-VCIDECVALSRHIESQVDRD---LEDYELEVGSTGL 75

Query: 100 DRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK------EKRGEK 153
             P+     +       ++  +       ++  G+++  +     LE       E    K
Sbjct: 76  TSPLKVMRQWENCIDSELSVLLT---NGMKE-TGRLITVAPEAIKLEVVRMVKPEGAKRK 131

Query: 154 DMNELQIAISFDSLLSA 170
                ++ I    +  A
Sbjct: 132 KPETQELTIVMADIKQA 148


>gi|224534153|ref|ZP_03674733.1| conserved hypothetical protein [Borrelia spielmanii A14S]
 gi|224514578|gb|EEF84892.1| conserved hypothetical protein [Borrelia spielmanii A14S]
          Length = 145

 Score = 59.3 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 62/151 (41%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++I+    +    +QI +   + ++ +    +L + I  IL+ 
Sbjct: 10  EVYNLIKNLTERLNVEILEINIFRNKNGGKIQIVLYSKNFSLGVDLMTDLHKMILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
               +  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 70  N--FKYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K      +  ++ + +  +  ARL+
Sbjct: 115 ILKSKSKSFIFKTDSKELNVFYSDVKKARLV 145


>gi|224531664|ref|ZP_03672296.1| conserved hypothetical protein [Borrelia valaisiana VS116]
 gi|224511129|gb|EEF81535.1| conserved hypothetical protein [Borrelia valaisiana VS116]
          Length = 145

 Score = 58.9 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 65/151 (43%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E  +   ++I++ + KN   +QI +   + ++ +    +L + I  IL+ 
Sbjct: 10  EVYNLIKNLTERANIEILEINVFKNKNSGKIQIVLYSKNFSLGIDLLTDLHKMILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              ++  + LE+S+PGI+R +    +F  + G  +   +                  E  
Sbjct: 70  N--LKYSFTLELSTPGINRKIKSDKEFQIFEGKKIKLMLDN-------------EFEEGL 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K      +  ++ + +  +  ARL+
Sbjct: 115 ILKSKSKSFIFKTDSKELNVFYSDVKKARLV 145


>gi|216264912|ref|ZP_03436904.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|218249670|ref|YP_002375298.1| hypothetical protein BbuZS7_0829 [Borrelia burgdorferi ZS7]
 gi|224532422|ref|ZP_03673050.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|226321264|ref|ZP_03796792.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
 gi|226708090|sp|B7J0P5|RIMP_BORBZ RecName: Full=Ribosome maturation factor rimP
 gi|215981385|gb|EEC22192.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|218164858|gb|ACK74919.1| conserved hypothetical protein [Borrelia burgdorferi ZS7]
 gi|224512645|gb|EEF83018.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|226233296|gb|EEH32047.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
          Length = 145

 Score = 58.9 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ +   ++   ++I+    + N  +QI +   + ++ +    +L + I  IL+ 
Sbjct: 10  EVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIVLYSKNFSLDIDFLTDLHKIILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              ++  + LE+S+PGIDR +    +F  + G  +   +                  E G
Sbjct: 70  N--LKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDNEF--------------EEG 113

Query: 143 FFLEKEKRG-EKDMNELQIAISFDSLLSARLI 173
           F LE + +      +  ++ + +  +  ARL+
Sbjct: 114 FILESKPKSFIFKTDSKEVNVFYSDVKKARLV 145


>gi|195941990|ref|ZP_03087372.1| hypothetical protein Bbur8_03844 [Borrelia burgdorferi 80a]
 gi|221217609|ref|ZP_03589078.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|223889333|ref|ZP_03623920.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|224533432|ref|ZP_03674025.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225549379|ref|ZP_03770351.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|225550239|ref|ZP_03771198.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|259016310|sp|O51739|RIMP_BORBU RecName: Full=Ribosome maturation factor rimP
 gi|221192555|gb|EEE18773.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|223885254|gb|EEF56357.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|224513394|gb|EEF83752.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225369107|gb|EEG98561.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|225370007|gb|EEG99448.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|312149294|gb|ADQ29365.1| conserved hypothetical protein [Borrelia burgdorferi N40]
          Length = 145

 Score = 58.5 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ +   ++   ++I+    + N  +QI +   + ++ +    +L + I  IL+ 
Sbjct: 10  EVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIVLYSKNFSLDIDFLTDLHKMILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              ++  + LE+S+PGIDR +    +F  + G  +   +                  E G
Sbjct: 70  N--LKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDNEF--------------EEG 113

Query: 143 FFLEKEKRG-EKDMNELQIAISFDSLLSARLI 173
           F LE + +      +  ++ + +  +  ARL+
Sbjct: 114 FILESKPKSFIFKTDSKEVNVFYSDVKKARLV 145


>gi|218194896|gb|EEC77323.1| hypothetical protein OsI_15994 [Oryza sativa Indica Group]
          Length = 327

 Score = 58.5 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 6/109 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVE 83
           ++ + V           +     NL +++ +E+     G+ T+ D E  + A    +D  
Sbjct: 151 ALAEEVSNSFDGDLKIYAFKTAANLTIRVRIEKMSTRYGSPTIDDIEAFTIAYRAKMDDA 210

Query: 84  NI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
                I  +  LEVSSPG++R +    D  R+    +     ++S   +
Sbjct: 211 ESAGRIPQNISLEVSSPGVERVIRIPDDLERFKERAMYVRYTITSDGGE 259


>gi|116310789|emb|CAH67581.1| H0315A08.11 [Oryza sativa Indica Group]
          Length = 326

 Score = 58.5 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 6/109 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVE 83
           ++ + V           +     NL +++ +E+     G+ T+ D E  + A    +D  
Sbjct: 150 ALAEEVSNSFDGDLKIYAFKTAANLTIRVRIEKMSTRYGSPTIDDIEAFTIAYRAKMDDA 209

Query: 84  NI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
                I  +  LEVSSPG++R +    D  R+    +     ++S   +
Sbjct: 210 ESAGRIPQNISLEVSSPGVERVIRIPDDLERFKERAMYVRYTITSDGGE 258


>gi|224062938|ref|XP_002300938.1| predicted protein [Populus trichocarpa]
 gi|222842664|gb|EEE80211.1| predicted protein [Populus trichocarpa]
          Length = 313

 Score = 58.5 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVE 83
            + + V           +     N  +Q+ +ER     G+  + D E  S      LD  
Sbjct: 139 KIAEEVCSTFDRELEIYAFKTLSNSTIQVRIERLTNKSGSPNMEDIEAFSTTYRARLDEA 198

Query: 84  NI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
            +   I  +  LEVSSPG++R +    D  R+    +  + V  +  K
Sbjct: 199 ELAKTITENITLEVSSPGVERVVRIPEDLDRFKDRAMYVKYVNEADAK 246


>gi|111115634|ref|YP_710252.1| hypothetical protein BAPKO_0852 [Borrelia afzelii PKo]
 gi|122956310|sp|Q0SM52|RIMP_BORAP RecName: Full=Ribosome maturation factor rimP
 gi|110890908|gb|ABH02076.1| hypothetical protein BAPKO_0852 [Borrelia afzelii PKo]
          Length = 145

 Score = 58.1 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++I+    +    +QI +   + ++ +    +L + I  IL+ 
Sbjct: 10  EVYNLIKNLTERLNVEILEINIFRNKNGGKIQIVLYSKNFSLGIDLMTDLHKMILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              ++  + LE+S+PGIDR +    +F  + G  +   +                  E G
Sbjct: 70  N--LKYSFILELSTPGIDRRIKSDKEFQIFEGKKIKLMLDNEF--------------EEG 113

Query: 143 FFLEKEKRG-EKDMNELQIAISFDSLLSARLI 173
           F LE + +      +  ++ + +  +  ARL+
Sbjct: 114 FILEAKSKSFIFKTDSKELNVFYSDVKKARLV 145


>gi|110597608|ref|ZP_01385893.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
 gi|110340728|gb|EAT59205.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
          Length = 173

 Score = 57.8 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 62/148 (41%), Gaps = 13/148 (8%)

Query: 35  EMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI----IEGH 89
                 V + +   ++   ++I V+ DD  + +  C  LS+ +  +L+ +      +   
Sbjct: 21  GEGAYLVDLKVKGPQRARKIEILVD-DDSGVRIDQCAWLSRRLRELLESDEELLALVGED 79

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG------- 142
           + + VSSPG+  P++    ++R  G ++          +++L G+++  S +        
Sbjct: 80  FEITVSSPGLGEPLMLHRQYVRHCGKIMEVTYTDEDAVQRELKGRLLRVSLSEESRPHIV 139

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSA 170
              EK ++     N  ++ +  D +  A
Sbjct: 140 IMPEKNRKKGSTPNREEVTLYLDQVNRA 167


>gi|115458524|ref|NP_001052862.1| Os04g0438300 [Oryza sativa Japonica Group]
 gi|38344074|emb|CAE02749.2| OSJNBa0006B20.18 [Oryza sativa Japonica Group]
 gi|113564433|dbj|BAF14776.1| Os04g0438300 [Oryza sativa Japonica Group]
 gi|215694700|dbj|BAG89891.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222628915|gb|EEE61047.1| hypothetical protein OsJ_14901 [Oryza sativa Japonica Group]
          Length = 327

 Score = 57.8 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 6/109 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVE 83
           ++ + V           +     NL +++ +E+     G+ T+ D E  + A    +D  
Sbjct: 151 ALAEEVSNSFDGDLKIYAFKTAANLTIRVRIEKMSTRYGSPTIDDIEAFTIAYRAKIDDA 210

Query: 84  NI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
                I  +  LEVSSPG++R +    D  R+    +     ++S   +
Sbjct: 211 ESAGRIPQNISLEVSSPGVERVIRIPDDLERFKERAMYVRYTITSDGGE 259


>gi|332830403|gb|EGK03031.1| hypothetical protein HMPREF9455_01281 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 155

 Score = 57.4 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 13/106 (12%)

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           C  LS+ I   LD E      + LEV S G+  P      + +  G+ V           
Sbjct: 48  CIALSRDIESRLDRE---AEDFELEVGSAGVTSPFKIPRQYKKNEGNEVEVLTKA----G 100

Query: 129 QKLIGKIMGTSETGFFLEK------EKRGEKDMNELQIAISFDSLL 168
           QKL G +  +   GF +        E   +K   E  ++ ++D + 
Sbjct: 101 QKLSGVLKTSDNNGFVITITKMVKPEGAKKKTALEEDLSFAYDEVK 146


>gi|81428863|ref|YP_395863.1| hypothetical protein LSA1252 [Lactobacillus sakei subsp. sakei 23K]
 gi|78610505|emb|CAI55556.1| Hypotehtical protein [Lactobacillus sakei subsp. sakei 23K]
          Length = 70

 Score = 57.0 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
           M +++DF    G  +   +  +   ++   G +    +    L  + +  +     ++  
Sbjct: 1   MKKEADFQNALGEYIHISLYQAVDGEKIYQGILKALDQETLTLAIKIKTRQK----EVTF 56

Query: 163 SFDSLLSARLIV 174
           +   +  ARL +
Sbjct: 57  NRKEIAKARLAI 68


>gi|225551682|ref|ZP_03772626.1| conserved hypothetical protein [Borrelia sp. SV1]
 gi|225371709|gb|EEH01135.1| conserved hypothetical protein [Borrelia sp. SV1]
          Length = 145

 Score = 57.0 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ +   ++   ++I+    + N  ++I +   + ++ +    +L + I  IL+ 
Sbjct: 10  EVFNLIKDLTGRLNVEILEINIFRNKNNGKIKIVLYSKNFSLDIDFLTDLHKIILLILEA 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
              ++  + LE+S+PGIDR +    +F  + G  +   +                  E G
Sbjct: 70  N--LKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDNEF--------------EEG 113

Query: 143 FFLEKEKRG-EKDMNELQIAISFDSLLSARLI 173
           F LE + +      +  ++ + +  +  ARL+
Sbjct: 114 FILESKPKSFIFKTDSKEVNVFYSDVKKARLV 145


>gi|297842485|ref|XP_002889124.1| hypothetical protein ARALYDRAFT_476875 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334965|gb|EFH65383.1| hypothetical protein ARALYDRAFT_476875 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 318

 Score = 57.0 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 27/170 (15%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISPILDVE 83
           ++ + V E         +     N  +Q+ +ER     G+ T+ D E  S      L   
Sbjct: 148 ALAEKVCESFDGDLGIYAFKTLPNSTIQVRIERLTNKFGSPTMEDIEAYSTIYRAKLAEA 207

Query: 84  NI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG----KIM 136
            +   I  +  LEVSSPG++R +    D  R+    +         +  +  G    +++
Sbjct: 208 GLAKSIPDNISLEVSSPGVERVVRIPQDLDRYKDRPMYVRYT---NEDTETEGDGIFRLI 264

Query: 137 GTS-----------ETGFFLEKEKRGE---KDMNELQIAISFDSLLSARL 172
                         +T    EK  +G    K   E ++  +F+SL   RL
Sbjct: 265 SFDVEAKSCIWGIADTRVNREKAGKGRPLSKKQREWRLETAFESLRLVRL 314


>gi|303283206|ref|XP_003060894.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457245|gb|EEH54544.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 332

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 23/149 (15%)

Query: 46  LEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMV 104
           +E + +   +   +D  G+ TL    E+S+  + +L+ EN  E    LEV+SPG +R + 
Sbjct: 185 VERRRVYASVDAVKDKFGSPTLDQLGEVSRKFNALLEEENFPEDV-ALEVASPGAERALR 243

Query: 105 RKSDFLRWNGHVVACEI-------------------VLSSGDKQKLIGKIMGTSETGFFL 145
              D  R+    +                       V   GD  +   K+    E     
Sbjct: 244 LPDDLPRFRNLTMKVTYAAAAEDDGAEGTRTRVMDVVDVDGDAVEF--KLADVPENRPQA 301

Query: 146 EKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +K +   K   E ++ I    +  A L +
Sbjct: 302 KKGQGMNKKQREWRLKIPIADVAKANLFI 330


>gi|30699240|ref|NP_849898.1| unknown protein [Arabidopsis thaliana]
 gi|62320812|dbj|BAD93751.1| hypothetical protein [Arabidopsis thaliana]
 gi|110742469|dbj|BAE99153.1| hypothetical protein [Arabidopsis thaliana]
 gi|114050645|gb|ABI49472.1| At1g77122 [Arabidopsis thaliana]
 gi|332197817|gb|AEE35938.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 323

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 27/170 (15%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISPILDVE 83
           ++   V E         +     N  +Q+ +ER     G+ T+ D E  S      L   
Sbjct: 153 ALAVKVCESFDGDLGIYAFKTLPNSTIQVRIERLTNKFGSPTMEDIEAFSTIYRAKLAEA 212

Query: 84  NI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG----KIM 136
            +   I  +  LEVSSPG++R +    D  R+    +         +  +  G    +++
Sbjct: 213 ELAKSIPDNISLEVSSPGVERVVRIPQDLDRYKDRPMYVRYT---NEDTETEGDGIFRLV 269

Query: 137 GTSETG---------FFLEKEKRGE-----KDMNELQIAISFDSLLSARL 172
                            + +EK G+     K   E ++  +F+SL   RL
Sbjct: 270 SFDVEAKICIWGIADIRVNREKAGKGRPLSKKQREWRLETAFESLRLVRL 319


>gi|168032332|ref|XP_001768673.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680172|gb|EDQ66611.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 586

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 8/93 (8%)

Query: 28  VIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISPILD-- 81
           + +  + +            +E   ++++ V++     G+ ++ + ++ S   S  LD  
Sbjct: 414 LAEETVAQFDGLEIFAFKASKESG-IIRVRVDKLSDKYGSPSMDEIQKFSSTYSKALDKA 472

Query: 82  -VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN 113
             E  +     LEVSSPG +R +    D  R+ 
Sbjct: 473 GEEKTVPDDLALEVSSPGAERVVRIPQDLERFK 505


>gi|255570398|ref|XP_002526158.1| conserved hypothetical protein [Ricinus communis]
 gi|223534535|gb|EEF36234.1| conserved hypothetical protein [Ricinus communis]
          Length = 306

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 6/103 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD---DGNMTLRDCEELSQAISPIL 80
           ++  + + V +         +     N  +Q+ +ER     G+ T+ D E  S      L
Sbjct: 129 EVLRLAEEVCKSFDGELKLYAFKTLSNSTIQVRIERLTNRSGSPTMEDIEAFSTTYRTWL 188

Query: 81  DVENI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           D   +   I  +  LEVSSPG++R +    +  R+    +  +
Sbjct: 189 DEAELAKTIPTNIALEVSSPGVERIVRIPEELDRFKDRSMYVK 231


>gi|213421301|ref|ZP_03354367.1| hypothetical protein Salmonentericaenterica_27659 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 58

 Score = 55.1 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 8/63 (12%)

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           R+ G  VA  + ++  +++K  G I         +  E + E          +  ++  A
Sbjct: 1   RFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEV--------FALSNIQKA 52

Query: 171 RLI 173
            L+
Sbjct: 53  NLV 55


>gi|203288227|ref|YP_002223242.1| hypothetical protein BRE_810 [Borrelia recurrentis A1]
 gi|259585731|sp|B5RQD7|RIMP_BORRA RecName: Full=Ribosome maturation factor rimP
 gi|201085447|gb|ACH95021.1| uncharacterized conserved protein [Borrelia recurrentis A1]
          Length = 143

 Score = 54.3 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 66/151 (43%), Gaps = 17/151 (11%)

Query: 23  GDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +I  +I+ V   +    ++I +  +     +QI + + D N ++    +L + I  +L 
Sbjct: 8   SEIYDLIKDVTYLLGISIIEINTFRKRDEFKIQIVLYKSD-NFSVDMLCDLHKMI--LLK 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +E +++ +  LE+S+PGI+R +    +F  + G  +   +           G I+     
Sbjct: 65  LEAVLKYNVSLEISTPGINRKIKSDREFKIFEGKKIKLMLNNDFE-----EGFILRAERD 119

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           GF  + E +         + I + ++  A+L
Sbjct: 120 GFIFKTEYKK--------VKILYSNVKKAKL 142


>gi|203284695|ref|YP_002222435.1| hypothetical protein BDU_807 [Borrelia duttonii Ly]
 gi|259585730|sp|B5RMZ3|RIMP_BORDL RecName: Full=Ribosome maturation factor rimP
 gi|201084138|gb|ACH93729.1| uncharacterized conserved protein [Borrelia duttonii Ly]
          Length = 143

 Score = 53.9 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 68/151 (45%), Gaps = 17/151 (11%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILD 81
            +I  +I+ V   +    ++I+    ++   +QI + + D N ++    +L + I  +L 
Sbjct: 8   SEIYDLIKDVTYLLGISIIEINTFRRRDEFKIQIVLYKSD-NFSVDMLCDLHKMI--LLK 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +E +++ +  LE+S+PGI+R +    +F  + G  +   +           G I+     
Sbjct: 65  LEAVLKYNVSLEISTPGINRKIKSDREFKIFEGKKIKLMLNNDFE-----EGFILRAERD 119

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           GF  + E +        ++ I + ++  A+L
Sbjct: 120 GFIFKTEYK--------EVKILYSNVKKAKL 142


>gi|195649031|gb|ACG43983.1| hypothetical protein [Zea mays]
          Length = 319

 Score = 53.9 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 45  LLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVENI---IEGHYRLEVSSPG 98
                NL +++ +E+     G+ T+ D E  + A    LD       I  +  LEVSSPG
Sbjct: 163 FKTAANLTIRVRIEKMSTRYGSPTIDDIEAYTIAYRAKLDEAESAGKIPKNISLEVSSPG 222

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGDK---QKLIGKIM-------------GTSETG 142
           ++R +    +  R+    +      +S +    Q+  G +              G ++  
Sbjct: 223 VERVIRIPEELERFKERAMYVRYTTASDEATTPQEGDGVLTLISYDMDLRECTWGIADVK 282

Query: 143 FFLEKEKRGE---KDMNELQIAISFDSLLSARL 172
              ++  +G    K   E ++   F+SL   RL
Sbjct: 283 INRQQSGKGRPLSKKQREWRLQTPFESLKLVRL 315


>gi|313665235|ref|YP_004047106.1| hypothetical protein MSB_A0351 [Mycoplasma leachii PG50]
 gi|312949483|gb|ADR24079.1| conserved hypothetical protein [Mycoplasma leachii PG50]
          Length = 164

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 56/129 (43%), Gaps = 4/129 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE---RDDGNMTLRDCEELSQA 75
            +   I+ ++   +E ++ +  +I+ L+E +N ++QI VE   + +  +      + +  
Sbjct: 6   SIKFQINELVNKELEVLNLKVYEINNLKEFENDMIQILVEDALQANKPLDFDILIKANDL 65

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +D        Y LE+SS GI++ +  + + ++     V  ++       ++  G +
Sbjct: 66  VSNKIDQIIKTNQKYLLEISSSGIEKQIRSQEELIKALDQWVYVQLNNEIKKVKEFEGYL 125

Query: 136 MGTSETGFF 144
              +     
Sbjct: 126 TKYNNDTDT 134


>gi|42560897|ref|NP_975348.1| hypothetical protein MSC_0353 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|331703355|ref|YP_004400042.1| hypothetical protein MLC_3350 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|51316641|sp|Q6MTP6|RIMP_MYCMS RecName: Full=Ribosome maturation factor rimP
 gi|42492394|emb|CAE76990.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|301320615|gb|ADK69258.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
 gi|328801910|emb|CBW54063.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 164

 Score = 53.1 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 66/159 (41%), Gaps = 6/159 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE---RDDGNMTLRDCEELSQA 75
            L   I+ ++   +E ++ +  QI+ L+E +N ++QI VE   + +  +      + +  
Sbjct: 6   SLKFQINELVNKELEVLNLKVYQINNLKEFENDMIQILVEDSLQANKPLDFDILIKANDL 65

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +D     +  Y LE+SS GI++ +  + + L+     V  ++       ++  G +
Sbjct: 66  VSNKIDQLIKTKDKYLLEISSSGIEKQIRSQEELLKALEQWVYVQLNNEIKKVKEFEGYV 125

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++           +     L +   FD +   R  V
Sbjct: 126 TKYNDQTNTFTFSFFIKGQKKNLDVK--FDDIKFIRYAV 162


>gi|242075876|ref|XP_002447874.1| hypothetical protein SORBIDRAFT_06g017270 [Sorghum bicolor]
 gi|241939057|gb|EES12202.1| hypothetical protein SORBIDRAFT_06g017270 [Sorghum bicolor]
          Length = 327

 Score = 52.8 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 45  LLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVENI---IEGHYRLEVSSPG 98
                NL +++ +E+     G+ T+ D E  + A    LD       I  +  LEVSSPG
Sbjct: 171 FKTAANLTIRVRIEKMSTRYGSPTIDDIEAYTIAYRAKLDDAESTGKIPKNISLEVSSPG 230

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGDK---QKLIGKIM-------------GTSETG 142
           ++R +    +  R+    +      +S +    Q+  G +              G ++  
Sbjct: 231 VERVIRIPEELERFKERAMYVRYTTTSDEAATPQEGDGVLRLISYDMDLRECIWGIADVK 290

Query: 143 FFLEKEKRGE---KDMNELQIAISFDSLLSARL 172
              ++  +G    K   E ++   F+SL   RL
Sbjct: 291 INRQQSGKGRPLSKKQREWRLQTPFESLKLVRL 323


>gi|326495670|dbj|BAJ85931.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 335

 Score = 52.8 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 6/107 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVE 83
           ++ + V           +     NL +++ +E+     G+ T+ D E  + A    LD  
Sbjct: 161 ALAEEVSASFDGDLKIYAFKATANLEIRVRIEKMSTRYGSPTIDDIEAYTIAYRAKLDDA 220

Query: 84  NI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
                I  +  LEVSSPG++R +    D  R+    +    V++S D
Sbjct: 221 ESAGRIPKNVSLEVSSPGVERVIRVPDDLERFKERSMYVRYVITSKD 267


>gi|229496701|ref|ZP_04390415.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229316598|gb|EEN82517.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 157

 Score = 52.4 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 56/134 (41%), Gaps = 14/134 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
             +  +   ++ ++ P  E      V +S+    +++  + ++   G +T+  C  +S+ 
Sbjct: 4   VTEEIVQKKLNEMLDPAEE----FVVSLSISPANDIV--VVLDSLSG-ITIERCSAISKG 56

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I   LD +   +  + +EV S  +  P   +  F +  G  +         D  K  G +
Sbjct: 57  IEAALDRD---KEDFSIEVGSASLSDPFRDERQFAKHQGDPIVV----LFSDGMKRNGIL 109

Query: 136 MGTSETGFFLEKEK 149
           + + + GF L+ E+
Sbjct: 110 LSSDQEGFVLQYEE 123


>gi|83319689|ref|YP_424321.1| hypothetical protein MCAP_0337 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|91208351|sp|Q2SSE2|RIMP_MYCCT RecName: Full=Ribosome maturation factor rimP
 gi|83283575|gb|ABC01507.1| conserved hypothetical protein [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 164

 Score = 52.4 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 56/127 (44%), Gaps = 4/127 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE---RDDGNMTLRDCEELSQA 75
            +   I+ ++   +E ++ +  +I+ L+E +N ++QI VE   + +  +      + +  
Sbjct: 6   SIKFQINELVNKELEVLNLKVYEINNLKEFENDMIQILVEDALQANKPLDFDILIKANDL 65

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +D        Y LE+SS GI++ +  + + ++     V  ++       ++  G +
Sbjct: 66  VSNKIDQIIKTNQKYLLEISSSGIEKQIRSQEELIKALDQWVYVQLNNEIKKVKEFEGYV 125

Query: 136 MGTSETG 142
              +   
Sbjct: 126 TKYNNDT 132


>gi|302830199|ref|XP_002946666.1| hypothetical protein VOLCADRAFT_116086 [Volvox carteri f.
           nagariensis]
 gi|300268412|gb|EFJ52593.1| hypothetical protein VOLCADRAFT_116086 [Volvox carteri f.
           nagariensis]
          Length = 438

 Score = 52.0 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 50/125 (40%), Gaps = 10/125 (8%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD---GNMTLRDCEELS 73
           G++ L      + +P ++ +     +      K   + I +++ D   G+ ++ D E   
Sbjct: 255 GEVVLRAAQEVLAKPPMKGLELYLFRALPATRK---VDIRLDKLDDLYGSPSIDDIERFQ 311

Query: 74  QAISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           + +   L+ E      G    EVSSPG +R +    +  R+    +  E      D +++
Sbjct: 312 RGLLAALEREMGPEAAGEISFEVSSPGAERLVRVPEELPRFAELPLQVEYRTP--DGKEV 369

Query: 132 IGKIM 136
              ++
Sbjct: 370 SAVLL 374


>gi|256384402|gb|ACU78972.1| conserved hypothetical protein [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256385234|gb|ACU79803.1| conserved hypothetical protein [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455490|gb|ADH21725.1| conserved hypothetical protein [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 164

 Score = 52.0 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 66/159 (41%), Gaps = 6/159 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE---RDDGNMTLRDCEELSQA 75
            L   I+ ++   +E ++ +  QI+ L+E +N ++QI VE   + +  +      + +  
Sbjct: 6   SLKFQINELVNKELEVLNLKVYQINNLKEFENDMIQILVEDALQANKPLDFDILIKANDL 65

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +D        Y LE+SS GI++ +  + + L+     V  ++   +   ++  G +
Sbjct: 66  VSNKIDQIIKTNQKYLLEISSSGIEKQIRNQEELLKALEQWVYVQLNNETKKVKEFEGYV 125

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++           +     L +   FD +   R  V
Sbjct: 126 TKYNDQTNTFTFSFFIKGQKKNLDVK--FDDIKFIRYAV 162


>gi|300780962|ref|ZP_07090816.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
 gi|300532669|gb|EFK53730.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
          Length = 196

 Score = 52.0 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 5/90 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++  +I+PV +        +  ++       +     D   TL   EE+S  +S + D
Sbjct: 9   VEELKELIRPVTDARGLDIEAVRTVKAGKKSQVVVALAADEAPTLDQLEEVSGELSELFD 68

Query: 82  VENI-----IEGHYRLEVSSPGIDRPMVRK 106
                        Y LEV++PG+D P+ + 
Sbjct: 69  AAEAAGTVNFGAGYTLEVTTPGVDLPLTQP 98


>gi|225457765|ref|XP_002264003.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|302142766|emb|CBI19969.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 51.2 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 45  LLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVENI---IEGHYRLEVSSPG 98
                N  +Q+ +E+     G+ ++ D E  S      LD   I   +  +  LEVSSPG
Sbjct: 159 FKTLANSTIQVRIEKLSNKSGSPSMTDIEAFSSIYRAKLDEAEIAGSVPENLSLEVSSPG 218

Query: 99  IDRPMVRKSDFLRWNGHVVACE 120
           ++R +    +  R+    +  +
Sbjct: 219 VERVVQIPQELDRFKERPMYVK 240


>gi|297841651|ref|XP_002888707.1| hypothetical protein ARALYDRAFT_315930 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297334548|gb|EFH64966.1| hypothetical protein ARALYDRAFT_315930 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1151

 Score = 50.8 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 59/204 (28%), Gaps = 52/204 (25%)

Query: 23   GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPI 79
              + S+   V+++        +        + + +++   + G  T+   EE S+     
Sbjct: 947  EKVLSIAAEVLKQSEEELELFAFKTSPRGYIYVRLDKLSNEYGCPTMDKLEEFSREFKKR 1006

Query: 80   LD---VENIIEGHYRLEV-----------------------------SSPGIDRPMVRKS 107
            LD    E +I     LEV                             SSPG +R +    
Sbjct: 1007 LDDAGAEKVIPEDLALEVKRVFLHESTTTQGQFVLNLVSVLFFSVKVSSPGAERLLRVPE 1066

Query: 108  DFLRWNGHVVACEIVLSSGDKQKLIG-----------------KIMGTSETGFFLEKEKR 150
            D  R+    +    V  +  ++ +                   K+    E      K + 
Sbjct: 1067 DLPRFKEMPMTVSYVEKTNSRKVVKTAVFLLESIDAESDNCVWKLADVKENRDPESKGRP 1126

Query: 151  GEKDMNELQIAISFDSLLSARLIV 174
              +   +L+I + F       L +
Sbjct: 1127 LSRKQKDLRITLPFTDHKKINLYL 1150


>gi|296125434|ref|YP_003632686.1| hypothetical protein Bmur_0384 [Brachyspira murdochii DSM 12563]
 gi|296017250|gb|ADG70487.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563]
          Length = 188

 Score = 50.4 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 29  IQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           I+ ++E+     + + +     N  +   + +   +++   C E ++ I   +      E
Sbjct: 46  IKDILEKDGIYLLDLKVRAISDNKKVYAVIYKKKESVSHTHCIETTRKIQECIKQNGYDE 105

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI---GKIMGTSETGFF 144
           G Y + VSS G  R       +  + G  +  +      D ++ I    ++    +    
Sbjct: 106 GDYTITVSSAGF-RWKFNDR-YELFEGMPIKIKYR----DGEQFITSYAELKEAEDDYII 159

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARL 172
           +         +NE  I I  + ++ ARL
Sbjct: 160 INVLDED-NIINEKNIKILKNDIIKARL 186


>gi|313678839|ref|YP_004056579.1| hypothetical protein MBOVPG45_0800 [Mycoplasma bovis PG45]
 gi|312950794|gb|ADR25389.1| conserved hypothetical protein [Mycoplasma bovis PG45]
          Length = 148

 Score = 50.4 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 60/141 (42%), Gaps = 10/141 (7%)

Query: 32  VIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           ++ +       + LL+E  LL+   +E    +  L+  EEL++ I+  +D  ++      
Sbjct: 7   LVNKFGNTIADVKLLKEDGLLI---LEVTASSTDLKAIEELTKLINEYIDSLDVELDFDS 63

Query: 92  LEVSSPGIDRPMVRKSD-FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
           L VSSPG    +  ++D      G ++  ++  +        G+++   +    L+   +
Sbjct: 64  LSVSSPGF--KLDYETDELGNHIGEIIDVKLNQNVNKLDSYTGELLEDDDESILLKWNCK 121

Query: 151 GEKDMNELQIAISFDSLLSAR 171
           G+      ++ I   ++  AR
Sbjct: 122 GQFR----KVRIEKSNIKKAR 138


>gi|126654114|ref|ZP_01725932.1| hypothetical protein BB14905_22743 [Bacillus sp. B14905]
 gi|126589394|gb|EAZ83544.1| hypothetical protein BB14905_22743 [Bacillus sp. B14905]
          Length = 44

 Score = 49.7 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 25 ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD 60
          I  + +P+++E++   V I  ++E +N  L+++V+  
Sbjct: 8  IEELAKPIVDELNLELVDIEFVKEGRNWFLRVYVDTP 44


>gi|238809616|dbj|BAH69406.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 210

 Score = 49.7 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 51/140 (36%), Gaps = 21/140 (15%)

Query: 30  QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
             +IEE   + + IS+                    L   EE+S+ ++  +D        
Sbjct: 84  AKIIEEDDLKLLDISVNYH----------------DLNKVEEISKQLNEFIDSNYPSLDI 127

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
             L + SPG++          +  G ++  ++  S   + K  GK++   E    +    
Sbjct: 128 DSLSIHSPGVELTYKTDE-LGKHIGEMLTIKLNKSIEKQDKFNGKLLEVLEGKIQISWNN 186

Query: 150 RGEKDMNELQIAISFDSLLS 169
           +G+      ++ I  ++++ 
Sbjct: 187 KGQFR----KVFIDKNNIVK 202


>gi|308189650|ref|YP_003922581.1| hypothetical protein MFE_00760 [Mycoplasma fermentans JER]
 gi|307624392|gb|ADN68697.1| conserved hypothetical protein [Mycoplasma fermentans JER]
          Length = 203

 Score = 49.7 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 42/105 (40%), Gaps = 5/105 (4%)

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            L   EE+S+ ++  +D          L + SPG++          +  G ++  ++  S
Sbjct: 96  DLNKVEEISKQLNEFIDSNYPSLDIDSLSIHSPGVELTYKTDE-LGKHIGEMLTIKLNKS 154

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
              + K  GK++   E    +    +G+      ++ I  ++++ 
Sbjct: 155 IEKQDKFNGKLLEVLEGKIQISWNNKGQFR----KVFIDKNNIVK 195


>gi|147801247|emb|CAN61512.1| hypothetical protein VITISV_013332 [Vitis vinifera]
          Length = 231

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 45  LLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVENI---IEGHYRLEVSSPG 98
                N  +Q+ +E+     G+ ++ D E  S      LD   I   +  +  LEVSSPG
Sbjct: 75  FKTLANSTIQVRIEKLSNKSGSPSMTDIEAFSSIYRAKLDEAEIAGSVPENLSLEVSSPG 134

Query: 99  IDRPMVRKSDFLRWNGHVVACE 120
           ++R +    +  R+    +  +
Sbjct: 135 VERVVQIPQELDRFKERPMYVK 156


>gi|6730645|gb|AAF27066.1|AC008262_15 F4N2.17 [Arabidopsis thaliana]
          Length = 1120

 Score = 48.9 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 60/184 (32%), Gaps = 32/184 (17%)

Query: 23   GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPI 79
              + S+   V+++        +        + + +++   + G  T+ + EE S+     
Sbjct: 936  ERVLSIAAQVLKQSEKDLELFAFKTSPRGYIYVRLDKLSTEYGCPTMDELEEFSREFKKR 995

Query: 80   LD---VENIIEGHYRLEVS---SP------GIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
            LD    E +I     LEV    SP      G +R +    D  R+    +    V  +  
Sbjct: 996  LDDAGAEKVIPEDLALEVKKSLSPVNQLSLGAERLLRVPEDLPRFKDMPMTVSYVEETNS 1055

Query: 128  KQKLI-G----------------KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            ++ +  G                K+    E      K +   +   +L+I + F      
Sbjct: 1056 RKAVKSGVFLLESIDAESDNCVWKLADVRENRDPESKGRPLSRKQKDLRITLPFADHKKI 1115

Query: 171  RLIV 174
             L +
Sbjct: 1116 NLYL 1119


>gi|300871261|ref|YP_003786134.1| hypothetical protein BP951000_1652 [Brachyspira pilosicoli 95/1000]
 gi|300688962|gb|ADK31633.1| hypothetical protein BP951000_1652 [Brachyspira pilosicoli 95/1000]
          Length = 182

 Score = 48.1 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 55/149 (36%), Gaps = 9/149 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +    + +IE+ +   + + +L  K N  +   + +   +++   C E ++ I  ++   
Sbjct: 40  LFENAKKLIEKHNIYLLDLKVLAVKDNKKVYAVIFKKKESVSHNHCIEATRVIQEVIKNN 99

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
              EG Y + VSS G         ++  +    +  +  +   +       +    +   
Sbjct: 100 GYDEGDYTITVSSAGFRW--KFDDNYELFEDMPIKIKYKVDDDNYITTTAILKEAKDDYI 157

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +      + D + + I I   +++  RL
Sbjct: 158 II------KNDDDNIDIKILKSNIIKTRL 180


>gi|219363185|ref|NP_001136801.1| hypothetical protein LOC100216947 [Zea mays]
 gi|194697162|gb|ACF82665.1| unknown [Zea mays]
          Length = 142

 Score = 47.7 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 22/133 (16%)

Query: 62  GNMTLRDCEELSQAISPILDVENI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
           G+ T+ D E  + A    LD       I  +  LEVSSPG++R +    +  R+    + 
Sbjct: 6   GSPTIDDIEAYTIAYRAKLDEAESAGKIPKNISLEVSSPGVERVIRIPEELERFKERAMY 65

Query: 119 CEIVLSSGDK---QKLIGKIM-------------GTSETGFFLEKEKRGE---KDMNELQ 159
                +S +    Q+  G +              G ++     ++  +G    K   E +
Sbjct: 66  VRYTTASDEATTPQEGDGVLTLISYDMDLRECTWGIADVKINRQQSGKGRPLSKKQREWR 125

Query: 160 IAISFDSLLSARL 172
           +   F+SL   RL
Sbjct: 126 LQTPFESLKLVRL 138


>gi|313886721|ref|ZP_07820430.1| conserved hypothetical protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923823|gb|EFR34623.1| conserved hypothetical protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 165

 Score = 47.4 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 7/96 (7%)

Query: 43  ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           + +       +++ V+   G + +  C E+S+AI+ + D +   E  Y LEVSSP +  P
Sbjct: 22  VEITSSPGDQIRVVVD-AMGGLPISRCVEISRAITQLHDRDE--EEDYALEVSSPSLSDP 78

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
                 + R     V            K  GK++  
Sbjct: 79  WQVYEQYTRHLEAPVQ----AVDASGMKWHGKLIEV 110


>gi|228470369|ref|ZP_04055272.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
 gi|228307951|gb|EEK16834.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
          Length = 165

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 7/96 (7%)

Query: 43  ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           + +       +++ V+   G + +  C E+S+AI+ + D +   E  Y LEVSSP +  P
Sbjct: 22  VEVTSSPGDQIRVVVD-AMGGLPISRCVEISRAITQLHDRDE--EEDYALEVSSPSLSDP 78

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
                 + R     V            K  GK++  
Sbjct: 79  WQVYEQYTRHLEAPVQ----AVDASGMKWHGKLIEV 110


>gi|319776807|ref|YP_004136458.1| hypothetical protein MfeM64YM_0071 [Mycoplasma fermentans M64]
 gi|318037882|gb|ADV34081.1| Conserved Hypothetical Protein [Mycoplasma fermentans M64]
          Length = 144

 Score = 47.0 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 42/105 (40%), Gaps = 5/105 (4%)

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            L   EE+S+ ++  +D          L + SPG++          +  G ++  ++  S
Sbjct: 37  DLNKVEEISKQLNEFIDSNYPSLDIDSLSIHSPGVELTYKTDE-LGKHIGEMLTIKLNKS 95

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
              + K  GK++   E    +    +G+      ++ I  ++++ 
Sbjct: 96  IEKQDKFNGKLLEVLEGKIQISWNNKGQFR----KVFIDKNNIVK 136


>gi|332300248|ref|YP_004442169.1| Ribosome maturation factor rimP [Porphyromonas asaccharolytica DSM
           20707]
 gi|332177311|gb|AEE13001.1| Ribosome maturation factor rimP [Porphyromonas asaccharolytica DSM
           20707]
          Length = 165

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 7/96 (7%)

Query: 43  ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           + +       +++ V+   G + +  C E+S+AI+ + D +   E  Y LEVSSP +  P
Sbjct: 22  VEITSSPGDQIRVVVD-VMGGLPISRCVEISRAITQLHDRDE--EEDYALEVSSPSLSDP 78

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
                 + R     V            K  GK++  
Sbjct: 79  WQVYEQYTRHLEAPVQ----AVDASGMKWHGKLIEV 110


>gi|255078408|ref|XP_002502784.1| predicted protein [Micromonas sp. RCC299]
 gi|226518050|gb|ACO64042.1| predicted protein [Micromonas sp. RCC299]
          Length = 298

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 24/144 (16%)

Query: 54  QIFVERDD-----GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           +I++  D      G+ TL     +S+  + +L+ +        LEV+SPG +R +    +
Sbjct: 154 RIYISIDAVNDKFGSPTLDQLGAVSRTYNTVLEEKGF-PDDVALEVASPGAERQLRLPLE 212

Query: 109 FLRWNGHVVACEIVLSSGD------KQKLI--------G----KIMGTSETGFFLEKEKR 150
             R+    +       + +      + K++        G    K+    E     +K + 
Sbjct: 213 LERFRDLTMKVTYAARAEEDGAEGTRTKVLDVEDIDEDGSPTFKLADVEENRPQAKKGQG 272

Query: 151 GEKDMNELQIAISFDSLLSARLIV 174
             K   + ++ +    +  A L V
Sbjct: 273 MNKKQRDWRLKLDVGDISKANLYV 296


>gi|147774154|emb|CAN72408.1| hypothetical protein VITISV_038204 [Vitis vinifera]
          Length = 1721

 Score = 45.4 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 6/110 (5%)

Query: 23   GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISPI 79
              + S+ + V+ +        S        + + +++     G  ++ + E  +      
Sbjct: 1432 ERVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPSMEEIERYNLEYKKK 1491

Query: 80   LDVENI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            LD       I  +  +EVSSPG +R +    D  R+    +    V    
Sbjct: 1492 LDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYVEDVE 1541


>gi|145220366|ref|YP_001131075.1| hypothetical protein Cvib_1563 [Prosthecochloris vibrioformis DSM
           265]
 gi|259586181|sp|A4SGG4|RIMP_PROVI RecName: Full=Ribosome maturation factor rimP
 gi|145206530|gb|ABP37573.1| protein of unknown function DUF150 [Chlorobium phaeovibrioides DSM
           265]
          Length = 172

 Score = 45.1 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 11/126 (8%)

Query: 55  IFVERDDGNMTLRDCEELSQAISPILDV----ENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           + V+ D G + +  C  LS+ +   L+       I+  ++ L V SPG+  P++    + 
Sbjct: 42  VVVDADSG-VRIDQCAFLSRRLRERLEEDEEMIGILGDNFDLVVGSPGLGEPIILDRQYG 100

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMGTS----ETGFFL--EKEKRGEKDMNELQIAISF 164
           R  G ++        G + +L G ++  S         L    EK+  K      I +  
Sbjct: 101 RHVGRLLRVSYSDLEGVEHELTGHLLEVSLAEGAGSIMLKPRVEKKKGKGEELENITLEL 160

Query: 165 DSLLSA 170
            ++L A
Sbjct: 161 GAVLRA 166


>gi|297738103|emb|CBI27304.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score = 44.3 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 6/110 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISPI 79
             + S+ + V+ +        S        + + +++     G  ++ + E  +      
Sbjct: 134 ERVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPSMEEIERYNLEYKKK 193

Query: 80  LDVENI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           LD       I  +  +EVSSPG +R +    D  R+    +    V    
Sbjct: 194 LDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYVEDVE 243


>gi|219124159|ref|XP_002182378.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406339|gb|EEC46279.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 402

 Score = 43.9 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 18/120 (15%)

Query: 63  NMTLR----DCEELSQAISPILDV------ENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
            + L     D   LS   + ILDV      E  I   + L ++SPG    +  +  F  +
Sbjct: 269 PIDLDTLQLDKAGLSTIANAILDVLGDAEEELQILSRHELILTSPGPVDVLETQRQFDAY 328

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               V  E        + L GK++  +     + K+ R         + I  + +   RL
Sbjct: 329 RDKDVMVETQDPFNSNRTLKGKLVDRNAMDLIINKKGR--------MVTIPLNFVKCVRL 380


>gi|293364040|ref|ZP_06610776.1| hypothetical protein MALL_0467 [Mycoplasma alligatoris A21JP2]
 gi|292552530|gb|EFF41304.1| hypothetical protein MALL_0467 [Mycoplasma alligatoris A21JP2]
          Length = 140

 Score = 43.9 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 5/115 (4%)

Query: 44  SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPM 103
            +   K+  L+I ++ +D    L   E+ S+ I   L+  N+++    LEV S G D  +
Sbjct: 19  EIQNNKDKTLEITLDCND----LLTVEKYSRQIYEYLETNNLLDDSTNLEVFSKGSDIEI 74

Query: 104 VRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNEL 158
                        V   +     +   + GKI+  S     L    +G+    E+
Sbjct: 75  KLDE-VNNHLNKKVLVGLKNPIQNLNPIPGKILSVSNDHIVLHWNNKGQFRKVEI 128


>gi|242047464|ref|XP_002461478.1| hypothetical protein SORBIDRAFT_02g003280 [Sorghum bicolor]
 gi|241924855|gb|EER97999.1| hypothetical protein SORBIDRAFT_02g003280 [Sorghum bicolor]
          Length = 321

 Score = 43.5 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 62  GNMTLRDCEELSQAISPILDVE---NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
           G   + + E  ++     LD       I     LEVSSPG +R +    D  R+    + 
Sbjct: 181 GCPDIEEIENFNRLYKQKLDEIIERGEISLDLALEVSSPGAERLLKVPEDLDRFKDMAMR 240

Query: 119 CEIVLSSGD 127
            + +    +
Sbjct: 241 VQYLAEGDN 249


>gi|226508874|ref|NP_001144098.1| hypothetical protein LOC100276934 [Zea mays]
 gi|195636892|gb|ACG37914.1| hypothetical protein [Zea mays]
          Length = 164

 Score = 43.5 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 45  LLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISPILDVE---NIIEGHYRLEVSSPG 98
                   + + +++     G   + + E+ ++     LD       I     LEVSSPG
Sbjct: 4   FKVSPKGYVYVRLDKLTDVYGCPDIEEIEKFNRLYKQKLDEIVERGEISLDLALEVSSPG 63

Query: 99  IDRPMVRKSDFLRWNGHVVACE 120
            +R +    D  R+    +  +
Sbjct: 64  AERLLKVPEDLDRFKDMAMRVQ 85


>gi|256371438|ref|YP_003109262.1| hypothetical protein Afer_0635 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256008022|gb|ACU53589.1| hypothetical protein Afer_0635 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 159

 Score = 42.7 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 14/72 (19%)

Query: 55  IFVERDDGNM-TLRDCEELSQAI-----SPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           +FVE DD +  +L + E++S+ +     S + DV         +EVSSPG++R + R   
Sbjct: 34  VFVEHDDASAPSLDELEQVSRDVVTVVRSELGDVA--------VEVSSPGLERRLRRIEQ 85

Query: 109 FLRWNGHVVACE 120
                G  VA  
Sbjct: 86  ARAVLGRSVAIR 97


>gi|219127219|ref|XP_002183837.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404560|gb|EEC44506.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 248

 Score = 42.7 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 51/116 (43%), Gaps = 11/116 (9%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV 116
             G +   D  +L++AI+   D + +   I   + +EV++PG    +     F  + G  
Sbjct: 134 PPGAV---DVTQLTRAINAAFDADEVGLAIAEAHEVEVTTPGASDELSGIM-FQSYRGFD 189

Query: 117 VACEIVLSSGDKQK-LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           V  + +  +  KQK + G++   ++    +  + R +   N+  I++    L  A+
Sbjct: 190 VIVQHMDKNTKKQKIIEGRLHERNDEFTVINIKGRMKNLKNQDIISV---KLPKAK 242


>gi|225423440|ref|XP_002273771.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 223

 Score = 42.7 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 6/110 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISPI 79
             + S+ + V+ +        S        + + +++     G  ++ + E  +      
Sbjct: 47  ERVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPSMEEIERYNLEYKKK 106

Query: 80  LDVENI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           LD       I  +  +EVSSPG +R +    D  R+    +    V    
Sbjct: 107 LDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYVEDVE 156


>gi|326515564|dbj|BAK07028.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 294

 Score = 42.0 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 6/89 (6%)

Query: 45  LLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISPILDVE---NIIEGHYRLEVSSPG 98
                   + + +++     G   + + E  ++     LD       I     LE+SSPG
Sbjct: 142 FKVSPKGYVYVRLDKLTSRYGCPGIEEIENFNRLYKQKLDEIIERGEIPLDLALEISSPG 201

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
            +R +    D  R+    +  + +     
Sbjct: 202 AERLLKVPGDLDRFKDMAMRVQYLAEGDG 230


>gi|255026352|ref|ZP_05298338.1| hypothetical protein LmonocytFSL_08425 [Listeria monocytogenes
          FSL J2-003]
          Length = 41

 Score = 42.0 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 21 LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFV 57
          +   + +++ P+ +E+    V I+  +E  N  L+IF+
Sbjct: 4  VLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFI 41


>gi|218190735|gb|EEC73162.1| hypothetical protein OsI_07201 [Oryza sativa Indica Group]
          Length = 829

 Score = 41.6 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           EVSSPG++R +    D  R+    +     ++S   +
Sbjct: 725 EVSSPGVERVIRIPDDLERFKERAMYVRYTITSDGGE 761


>gi|153812999|ref|ZP_01965667.1| hypothetical protein RUMOBE_03406 [Ruminococcus obeum ATCC 29174]
 gi|149830946|gb|EDM86036.1| hypothetical protein RUMOBE_03406 [Ruminococcus obeum ATCC 29174]
          Length = 56

 Score = 41.6 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR----GEKDMNELQIAISF 164
            G +V          +++  G +    E+   ++++ +     +KD+  +++AI F
Sbjct: 1   MGKLVEIRTYRPIEKQKEFCGILNAYDESSVTIDEDGQLRTFDKKDIALIRLAIEF 56


>gi|145352954|ref|XP_001420798.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581033|gb|ABO99091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 189

 Score = 41.2 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 63/178 (35%), Gaps = 22/178 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD---GNMTLRDCEEL 72
           +G+M L   +   +        +      +   +  +L   V++ +   G+ TL +   +
Sbjct: 13  YGEMALEA-LRDALASDAFAGEYDIFSFKVNASRRRVL-ASVDKLNDKYGSPTLDELTTI 70

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            +A + ILD     E     E++SPG  R +    +  R+   V+      +  + +   
Sbjct: 71  VRAHNAILDERGFPEDVAV-ELASPGAMRSLRVPRELERFRDLVMDVTYKEAIENPESTS 129

Query: 133 G-----KIMGTSETGFFLEKEKRGE-----------KDMNELQIAISFDSLLSARLIV 174
                 ++   S+T    +                 K   E ++ +  D+++ A L +
Sbjct: 130 NVTKTMEVTDISDTEVEWKLADVPANRPAKKGQGMNKKSREWRLRMPLDAVVRANLFI 187


>gi|115470641|ref|NP_001058919.1| Os07g0155200 [Oryza sativa Japonica Group]
 gi|50509569|dbj|BAD31346.1| unknown protein [Oryza sativa Japonica Group]
 gi|113610455|dbj|BAF20833.1| Os07g0155200 [Oryza sativa Japonica Group]
 gi|215686454|dbj|BAG87671.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737697|dbj|BAG96827.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218199109|gb|EEC81536.1| hypothetical protein OsI_24944 [Oryza sativa Indica Group]
 gi|222636456|gb|EEE66588.1| hypothetical protein OsJ_23139 [Oryza sativa Japonica Group]
          Length = 301

 Score = 40.8 bits (95), Expect = 0.089,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 6/89 (6%)

Query: 45  LLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISPILDV---ENIIEGHYRLEVSSPG 98
                   + + +++     G   + + E  ++     LD    +  I     +EVSSPG
Sbjct: 144 FKVSPKGYVYVRLDKLTNRYGCPGIEEIESFNKLYKQKLDELIEQGEIPLDLAIEVSSPG 203

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
            +R +    D  R+    +  + ++   D
Sbjct: 204 AERLLKVPKDLDRFKDMAMRVQYLVEGDD 232


>gi|47458984|ref|YP_015846.1| hypothetical protein MMOB1490 [Mycoplasma mobile 163K]
 gi|51316612|sp|Q6KIE1|RIMP_MYCMO RecName: Full=Ribosome maturation factor rimP
 gi|47458312|gb|AAT27635.1| conserved hypothetical protein [Mycoplasma mobile 163K]
          Length = 168

 Score = 40.8 bits (95), Expect = 0.100,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 40  SVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV-ENIIEGHYRLEVSSP 97
             +I+  +EK+   LQI +  ++    L    E S+ IS ILD  E  +   Y L++SS 
Sbjct: 43  IYEITWTKEKDDSFLQITL-NEN---NLEKITEYSKEISNILDNYEKELPSKYFLDISSR 98

Query: 98  GIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE 152
           GI+  + +  +   +    +   +     + +K+ G +         L+   +G+
Sbjct: 99  GINLSIQK-ENLDNYLEKYIEISL---VNETKKIKGILWEIKNETIILKVNFKGQ 149


>gi|291320688|ref|YP_003515953.1| hypothetical protein MAGa7990 [Mycoplasma agalactiae]
 gi|290753024|emb|CBH41000.1| Conserved hypothetical protein [Mycoplasma agalactiae]
          Length = 148

 Score = 40.4 bits (94), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 59/144 (40%), Gaps = 20/144 (13%)

Query: 32  VIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           ++E+   +   + ++ E  L +L++     D    L+D EEL++ ++  +D  N+     
Sbjct: 7   LVEKFGNKINDVKIVNEDGLLILEVIASSRD----LKDIEELTKIVNDYIDSLNVEFDFD 62

Query: 91  RLEVSSPGIDRPMVRKSDFL-----RWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
            L +SSPG       K D+         G +V  ++  +        G+I+  +     L
Sbjct: 63  SLSISSPGF------KMDYETDELGNHIGEIVDVKLNKNVNKLDFYTGEILENNPESILL 116

Query: 146 EKEKRGEKDMNELQIAISFDSLLS 169
           +   +G+      ++ I   ++  
Sbjct: 117 KWNCKGQFR----KVEIEKANIKK 136


>gi|148377962|ref|YP_001256838.1| hypothetical protein MAG_7000 [Mycoplasma agalactiae PG2]
 gi|148292008|emb|CAL59400.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2]
          Length = 136

 Score = 40.0 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 56/139 (40%), Gaps = 10/139 (7%)

Query: 32  VIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           ++E+   +   + ++ E  L +L++     D    L+D EEL++ ++  +D  N+     
Sbjct: 7   LLEKFGNKINDVKIVNEDGLLILEVIASSRD----LKDIEELTKIVNDYIDSLNVEFDFD 62

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            L +SSPG               G +V  ++  +        G+I+  +     L+   +
Sbjct: 63  SLSISSPGFTMDYETDE-LGNHIGEIVDVKLNKNVNKLDFYTGEILENNPETILLKWNCK 121

Query: 151 GEKDMNELQIAISFDSLLS 169
           G+      ++ I   ++  
Sbjct: 122 GQFR----KVEIEKANIKK 136


>gi|218188575|gb|EEC71002.1| hypothetical protein OsI_02674 [Oryza sativa Indica Group]
          Length = 106

 Score = 39.7 bits (92), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
            Y L VSSPG +R +    D  R+    +  + ++   D
Sbjct: 10  EYNLLVSSPGAERLLEVPEDLDRFKDMAIRVQYLVEGDD 48


>gi|224112098|ref|XP_002316081.1| predicted protein [Populus trichocarpa]
 gi|222865121|gb|EEF02252.1| predicted protein [Populus trichocarpa]
          Length = 229

 Score = 39.3 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 6/99 (6%)

Query: 27  SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVE 83
           S+ + V+          +        + + +++     G  ++ + E   Q     L+  
Sbjct: 60  SIAREVLLSFGDDIELFAFKTTPRGYVYVRLDKLSQPYGCPSIEELESYCQEYRKRLEEV 119

Query: 84  NI---IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
                I  +  +EVS+PG +R +    D  R+    +  
Sbjct: 120 GALGEIPNNLAVEVSTPGAERILKVPEDLSRFKDMPMRV 158


>gi|304373278|ref|YP_003856487.1| hypothetical protein MHR_0492 [Mycoplasma hyorhinis HUB-1]
 gi|304309469|gb|ADM21949.1| hypothetical protein MHR_0492 [Mycoplasma hyorhinis HUB-1]
          Length = 195

 Score = 38.9 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 13/101 (12%)

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR---WNGHVVACEI 121
            L+  EEL++ IS  +D  +     + L+V S G D  +    DF +        +   +
Sbjct: 89  DLKQIEELTRKISNFIDNFSSDNNQFYLDVLSQGTDTKL----DFAKLENHINEHIQVWL 144

Query: 122 VLSSGDKQKLI-GKIMGTSETGFFLEKEKRGEKDMNELQIA 161
                +K + + G ++   E    LE   +G K      + 
Sbjct: 145 -----NKDEFVLGYLLDKQENIITLEINVKGRKKKQNFNLE 180


>gi|294155313|ref|YP_003559697.1| hypothetical protein MCRO_0013 [Mycoplasma crocodyli MP145]
 gi|291600511|gb|ADE20007.1| conserved hypothetical protein [Mycoplasma crocodyli MP145]
          Length = 141

 Score = 38.5 bits (89), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 58/129 (44%), Gaps = 9/129 (6%)

Query: 44  SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPM 103
            L  +++  L+I ++  D    L+  E+ ++ I   L+ E+++     L++ S G D  +
Sbjct: 20  ELKNDQDFTLEIVLDTRD----LKTVEKYTREIYDFLENESLLGEDTSLDILSKGSD-II 74

Query: 104 VRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS 163
           V   +  ++ G  +   +     +  ++ GK++        ++  ++G       ++ ++
Sbjct: 75  VSIDEIEKFIGKKLVFSLKKEVMNTLEIPGKLLSVDGNNITIQFNQKGLLR----KVELN 130

Query: 164 FDSLLSARL 172
            +++   ++
Sbjct: 131 KENIKEVKI 139


>gi|213022853|ref|ZP_03337300.1| hypothetical protein Salmonelentericaenterica_09628 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 41

 Score = 37.7 bits (87), Expect = 0.77,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 15/46 (32%), Gaps = 8/46 (17%)

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++K  G I         +  E + E          +  ++  A L+
Sbjct: 1   RRKWQGIIKAVDGEMITVTVEGKDEV--------FALSNIQKANLV 38


>gi|121611482|ref|YP_999289.1| polypeptide-transport-associated domain-containing protein
           [Verminephrobacter eiseniae EF01-2]
 gi|121556122|gb|ABM60271.1| Polypeptide-transport-associated domain protein, FtsQ-type
           [Verminephrobacter eiseniae EF01-2]
          Length = 294

 Score = 37.7 bits (87), Expect = 0.85,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 13  PRIFGDMGLAGDI---SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           PR+ G  G +  +     ++QPV E +  R   + L        +  ++ +
Sbjct: 149 PRLQGPSGSSAQVLQMHGLLQPVFESLGLRLQGLELTGRGGW--RATLDNE 197


>gi|303240919|ref|ZP_07327430.1| PKD domain containing protein [Acetivibrio cellulolyticus CD2]
 gi|302591505|gb|EFL61242.1| PKD domain containing protein [Acetivibrio cellulolyticus CD2]
          Length = 4122

 Score = 37.0 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 5/44 (11%)

Query: 41   VQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
              +  L E +  ++  +   DG      CE  SQ IS ILD E+
Sbjct: 1665 WDVEYLPEGDYTIRYTLTDRDGYT----CEAFSQIIS-ILDAED 1703


>gi|301091565|ref|XP_002895965.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262096029|gb|EEY54081.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1277

 Score = 37.0 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 34  EEMSFRSVQISLLEEKNLLLQIFVERD 60
           E + F  + +  +E K  LL++ V+ D
Sbjct: 647 ENLGFVLIDLEYVEHKEDLLRVRVDND 673


>gi|159474558|ref|XP_001695392.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158275875|gb|EDP01650.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 253

 Score = 36.6 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +A+   L VE    G    EVSSPG +R +    +  R+    +  E     G
Sbjct: 141 RALDRELGVEA--AGEISFEVSSPGAERLVRVPDELRRFETLPLKVEYRTPEG 191


>gi|330723849|gb|AEC46219.1| hypothetical protein SRH_03395 [Mycoplasma hyorhinis MCLD]
          Length = 142

 Score = 36.6 bits (84), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 7/98 (7%)

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            L+  EEL++ IS  +D  +     + L+V S G D  +             +   +   
Sbjct: 36  DLKQIEELTRKISNFIDNFSSDNNQFYLDVLSQGTDTKLDFAK-LENHINEHIQVWL--- 91

Query: 125 SGDKQKLI-GKIMGTSETGFFLEKEKRGEKDMNELQIA 161
             +K + + G ++   E    LE   +G K      + 
Sbjct: 92  --NKDEFVLGYLLDKQENIITLEINVKGRKKKQNFNLE 127


>gi|268611648|ref|ZP_06145375.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ruminococcus
           flavefaciens FD-1]
          Length = 456

 Score = 36.6 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 13/70 (18%)

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE 152
           E+SS            + R+ G  +     L+ G  +K  G + G S     +E E    
Sbjct: 386 EISS----------EHYKRFIGRTMRV---LADGKAKKREGWLTGKSSEFIIVEFEGDSS 432

Query: 153 KDMNELQIAI 162
                + + I
Sbjct: 433 LIGQFVDVEI 442


>gi|126291875|ref|XP_001381794.1| PREDICTED: similar to Chromosome 20 open reading frame 114
           [Monodelphis domestica]
          Length = 491

 Score = 36.2 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           +I+G       ++       + + L+I I FD +    L +TD+L+ 
Sbjct: 87  QIIGLQVNTVNIKNLDLKFTESDRLRIKIPFDMVAGLNLAITDKLIE 133


>gi|20521302|dbj|BAB91816.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|20804622|dbj|BAB92312.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 165

 Score = 36.2 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           VSSPG +R +    D  R+    +  + ++   D
Sbjct: 74  VSSPGAERLLEVPEDLDRFKDMAIRVQYLVEGDD 107


>gi|119509513|ref|ZP_01628661.1| Transposase, IS605 OrfB [Nodularia spumigena CCY9414]
 gi|119510380|ref|ZP_01629515.1| Transposase, IS605 OrfB [Nodularia spumigena CCY9414]
 gi|119465017|gb|EAW45919.1| Transposase, IS605 OrfB [Nodularia spumigena CCY9414]
 gi|119465919|gb|EAW46808.1| Transposase, IS605 OrfB [Nodularia spumigena CCY9414]
          Length = 422

 Score = 36.2 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 18/70 (25%)

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNEL 158
           + R +   + F     HV    +       +  IG + G          +  G K     
Sbjct: 55  LHRLLKSNAHFQALYSHVAQQTLTTVFESFRSFIGLLKGVKGGTVEQRPKLPGYKKNALK 114

Query: 159 QIAISFDSLL 168
            +      + 
Sbjct: 115 LVTFPRADVK 124


>gi|317056657|ref|YP_004105124.1| RNA modification enzyme, MiaB family [Ruminococcus albus 7]
 gi|315448926|gb|ADU22490.1| RNA modification enzyme, MiaB family [Ruminococcus albus 7]
          Length = 465

 Score = 35.8 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 101 RPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQI 160
           R +  +  F R+ G  V     L+ G+ +   G + G ++    +E     +     +++
Sbjct: 393 REITCEW-FGRFVGQTVEV---LAEGEGRTAEGWLTGKNDENIIVEFPADKKYIGEFVKV 448

Query: 161 AI 162
            I
Sbjct: 449 RI 450


>gi|205373422|ref|ZP_03226226.1| hypothetical protein Bcoam_09035 [Bacillus coahuilensis m4-4]
          Length = 58

 Score = 35.8 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 4/30 (13%), Positives = 15/30 (50%)

Query: 21 LAGDISSVIQPVIEEMSFRSVQISLLEEKN 50
          +   +  +  P+++E+    V +  ++E +
Sbjct: 4  ITDLVEQLAPPILDELKLELVDVEYVKEGS 33


>gi|332027366|gb|EGI67449.1| Bardet-Biedl syndrome 4 protein-like protein [Acromyrmex
           echinatior]
          Length = 398

 Score = 35.8 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 28/82 (34%), Gaps = 22/82 (26%)

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSL 167
           D+  ++G     ++      K+                      ++     +I +   ++
Sbjct: 136 DWEIYHGREAYVKLNQLQEGKKYF--------------------KRSTELTKIELP--NI 173

Query: 168 LSARLIVTDELLRASLNNYGSY 189
             ARL + D+++  + N Y + 
Sbjct: 174 DLARLYLLDDMIPEARNAYTAA 195


>gi|297579039|ref|ZP_06940967.1| autotransporter adhesin [Vibrio cholerae RC385]
 gi|297536633|gb|EFH75466.1| autotransporter adhesin [Vibrio cholerae RC385]
          Length = 4405

 Score = 35.4 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 20/49 (40%), Gaps = 4/49 (8%)

Query: 128  KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLS-ARLIVT 175
             + + GK++  ++    L+      K   ++ + +    +   A L+ T
Sbjct: 3190 GKNITGKLVDFNDDVITLDV---TSKKGRKVLVEVPVSDISQAANLVQT 3235


>gi|114661966|ref|XP_001149221.1| PREDICTED: glycerophosphodiester phosphodiesterase
           domain-containing protein 3 [Pan troglodytes]
          Length = 318

 Score = 35.0 bits (80), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 80  LDVENIIEGHYRLEVSSP------GIDRPMVRKSD-FLRWNGHVVACEIVLSSGD-KQKL 131
           LD E++     +LEV SP      G DR MVR  D F R+    ++ EI   + +  +++
Sbjct: 103 LDFEDLPLYKEKLEVYSPPGHFAHGSDRRMVRLEDLFQRFPRTPMSVEIKGKNEELIREI 162

Query: 132 IGKIMGTSETGFFL 145
            G +         +
Sbjct: 163 AGLVRRYDRNEITI 176


>gi|81428864|ref|YP_395864.1| hypothetical protein LSA1253 [Lactobacillus sakei subsp. sakei
          23K]
 gi|78610506|emb|CAI55557.1| Hypothetical protein LCA_1253 [Lactobacillus sakei subsp. sakei
          23K]
          Length = 53

 Score = 35.0 bits (80), Expect = 4.7,   Method: Composition-based stats.
 Identities = 4/28 (14%), Positives = 15/28 (53%)

Query: 21 LAGDISSVIQPVIEEMSFRSVQISLLEE 48
          +   +  ++ P++++  F  V +  ++E
Sbjct: 4  VVETVHDLLVPILDQHHFELVDVEFVKE 31


>gi|325680283|ref|ZP_08159843.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus albus 8]
 gi|324107992|gb|EGC02248.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus albus 8]
          Length = 465

 Score = 35.0 bits (80), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 101 RPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQI 160
           R +  +  F R+ G  V     L  G+ +   G + G ++    +E +   +     +++
Sbjct: 393 REITSEW-FGRFVGRTVEV---LVEGEGRTGEGWLTGKNDENIIVEVKADKKYIGEFVRV 448

Query: 161 AI 162
            I
Sbjct: 449 RI 450


>gi|222082040|ref|YP_002541405.1| dipeptide ABC transporter [Agrobacterium radiobacter K84]
 gi|221726719|gb|ACM29808.1| dipeptide ABC transporter [Agrobacterium radiobacter K84]
          Length = 546

 Score = 35.0 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR-- 150
           E++SPG  R ++ K D     G        L++  K  +IG +M   +    L    +  
Sbjct: 259 EIASPGTRRALLEKGDVDVSVGLPPKDYAELAAAGKVNVIGTLMQNEQFNVDLNVTMKPF 318

Query: 151 -GEKDMNELQIAISFDSLLS 169
             ++    +  A+ +DS++ 
Sbjct: 319 DDKRVRQAIAYALPYDSIMK 338


>gi|156063154|ref|XP_001597499.1| hypothetical protein SS1G_01693 [Sclerotinia sclerotiorum 1980]
 gi|154697029|gb|EDN96767.1| hypothetical protein SS1G_01693 [Sclerotinia sclerotiorum 1980
          UF-70]
          Length = 719

 Score = 34.7 bits (79), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 19 MGLAGDISSVIQPVI---EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
          M     +   + P+I     +      + L E+++  L    ++D       D  E+S  
Sbjct: 1  MSGETQLEMSVDPIIPDEASIDDELSDVELEEDRSSSLSEIEDKDAEQ-EHEDDAEVSDE 59

Query: 76 ISPILDVENIIEGHYRLEVS 95
          +S   + ++      RLEVS
Sbjct: 60 LSNPSEDDDSEAETERLEVS 79


>gi|39940794|ref|XP_359934.1| hypothetical protein MGG_04843 [Magnaporthe oryzae 70-15]
 gi|145010933|gb|EDJ95589.1| hypothetical protein MGG_04843 [Magnaporthe oryzae 70-15]
          Length = 725

 Score = 34.7 bits (79), Expect = 6.1,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 15/96 (15%)

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK-QKLIGKIMGTSETGFFLEKEKRGE 152
           V SPGI+ P+    D        V       S +K ++  G I G S++   L  +    
Sbjct: 399 VESPGIE-PIFLYHD------EKVKKIPGAPSEEKIKEFRGLIDGLSKSLLELTDKYCDP 451

Query: 153 KDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
                 Q  I F  ++  R       +R SL    +
Sbjct: 452 AAGPLHQYTIEFQDIIMQR-------IRESLEPGDA 480


>gi|158291291|ref|XP_312817.3| AGAP003131-PA [Anopheles gambiae str. PEST]
 gi|157017704|gb|EAA08427.3| AGAP003131-PA [Anopheles gambiae str. PEST]
          Length = 506

 Score = 34.7 bits (79), Expect = 7.6,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           +W G  V+       G      G I   + +   + K  R    + +  + ++  ++  A
Sbjct: 4   KWVGKSVSIHCRNDIG---IFQGIIKRVTPSVVVITKAVRNGIPLKKNNVEVTLSAVDIA 60

Query: 171 RLIVTDELL 179
           +L    +L+
Sbjct: 61  KL----DLI 65


>gi|327271822|ref|XP_003220686.1| PREDICTED: solute carrier family 13 member 3-like [Anolis
           carolinensis]
          Length = 655

 Score = 34.3 bits (78), Expect = 8.3,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR--WNGHVVACEIVLSSGDKQKLI 132
            +   +D +++IE    +EVSS      + ++ ++    W G +++     S G    L 
Sbjct: 196 QLLANVDEKDLIEEKVTIEVSS-----DVRKEEEYKTNVWKGFLISIPYSASIGGTATLT 250

Query: 133 GK 134
           G 
Sbjct: 251 GT 252


>gi|326383590|ref|ZP_08205276.1| ATP-dependent DNA ligase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197674|gb|EGD54862.1| ATP-dependent DNA ligase [Gordonia neofelifaecis NRRL B-59395]
          Length = 649

 Score = 34.3 bits (78), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGN-MTLRDCEELSQAISPI 79
           A D+  + Q    E+     +I L  E + L  +I ++ D G  +TL DC +++  I  +
Sbjct: 100 AADLVWLAQVAALELHVPQWRIDLSNEHDRLTDRIVLDLDPGPEVTLDDCAKVALDIRDM 159

Query: 80  LD 81
           LD
Sbjct: 160 LD 161


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.175    0.537 

Lambda     K      H
   0.267   0.0535    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,303,126,888
Number of Sequences: 14124377
Number of extensions: 231689303
Number of successful extensions: 488212
Number of sequences better than 10.0: 1944
Number of HSP's better than 10.0 without gapping: 3222
Number of HSP's successfully gapped in prelim test: 412
Number of HSP's that attempted gapping in prelim test: 480351
Number of HSP's gapped (non-prelim): 3696
length of query: 192
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 61
effective length of database: 2,992,500,243
effective search space: 182542514823
effective search space used: 182542514823
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 78 (34.3 bits)