BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780789|ref|YP_003065202.1| hypothetical protein
CLIBASIA_03400 [Candidatus Liberibacter asiaticus str. psy62]
         (192 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|209883665|ref|YP_002287522.1| hypothetical protein OCAR_4512 [Oligotropha carboxidovorans OM5]
 gi|226706198|sp|B6JCS7|RIMP_OLICO RecName: Full=Ribosome maturation factor rimP
 gi|209871861|gb|ACI91657.1| hypothetical protein OCAR_4512 [Oligotropha carboxidovorans OM5]
          Length = 260

 Score =  187 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 61/187 (32%), Positives = 106/187 (56%), Gaps = 1/187 (0%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM 64
               S  EPR+  + G+A  ++++ +PV+E + +R V+I +  E    +QI  ER DG M
Sbjct: 9   ETATSTAEPRLVVEPGVAARVAAIAEPVLEGLGYRLVRIKISGEAGCTVQIMAERPDGTM 68

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            + DCE +S+A+SP++DV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+   
Sbjct: 69  LIDDCEAVSKALSPVMDVADPIQRAYRLEISSPGIDRPLVRQSDFERYTGHLVKIEMAAP 128

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEK-RGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
              +++  G + G  +    + ++  +  +        +    + SA L++TD+L+  S+
Sbjct: 129 HEGRKRFRGTLQGIEDNLVRITRDDAKSHEGAQPADARLPLADIASAHLVLTDQLIAESM 188

Query: 184 NNYGSYA 190
                  
Sbjct: 189 RRGRDAE 195


>gi|170750128|ref|YP_001756388.1| hypothetical protein Mrad2831_3730 [Methylobacterium radiotolerans
           JCM 2831]
 gi|259585788|sp|B1LX00|RIMP_METRJ RecName: Full=Ribosome maturation factor rimP
 gi|170656650|gb|ACB25705.1| protein of unknown function DUF150 [Methylobacterium radiotolerans
           JCM 2831]
          Length = 257

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 66/187 (35%), Positives = 100/187 (53%)

Query: 3   STHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG 62
           S+       E R+  + G+A  ++  I+  +  + FR V++ +       +QI  ER DG
Sbjct: 2   SSEIEADLSEKRLVREAGVAARVAQAIEGPLAGLGFRLVRVRMSNVNGCTVQIMAERPDG 61

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
             T+ DCE +S+AISPILDV++ + G Y LEVSSPGIDRP+VR SDF RW G+    E+ 
Sbjct: 62  TFTIDDCEAVSRAISPILDVDDPVGGAYNLEVSSPGIDRPLVRVSDFARWAGYEAKVELS 121

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
                +++  G +     TG  +  +    K+    +I +    L  A L++TDEL+R S
Sbjct: 122 PPLDGRKRFRGILGAPDPTGTTVPIDLPDVKEGLPSRIDLPLKDLAEAHLVLTDELIRES 181

Query: 183 LNNYGSY 189
           L   G  
Sbjct: 182 LRRGGPP 188


>gi|220924483|ref|YP_002499785.1| hypothetical protein Mnod_4615 [Methylobacterium nodulans ORS 2060]
 gi|219949090|gb|ACL59482.1| protein of unknown function DUF150 [Methylobacterium nodulans ORS
           2060]
          Length = 238

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 59/181 (32%), Positives = 96/181 (53%), Gaps = 2/181 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
              E R+  + G+A  ++ +++P +E + FR V++ +  +    +QI  ER DG MT+ D
Sbjct: 46  DAAEKRLITETGVAARVAQIVEPSLEGLGFRLVRVRVTGQNGCTVQIMAERPDGTMTVED 105

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+ ISP+LDV++ I   Y LE+SSPGIDRP+VR  DF RW GH    E+ +    +
Sbjct: 106 CESVSRTISPLLDVDDPIGRAYHLEISSPGIDRPLVRVGDFARWAGHEAKVELTVPLEGR 165

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  G I         +  +    K+       +    +  A L++TD L+R SL    +
Sbjct: 166 KRFRGIIRAPEGESVRI--DLPDAKEGTPASYDLRLRDIGEAHLVLTDALIRESLRRGSA 223

Query: 189 Y 189
            
Sbjct: 224 P 224


>gi|91974716|ref|YP_567375.1| hypothetical protein RPD_0234 [Rhodopseudomonas palustris BisB5]
 gi|123749481|sp|Q13EL5|RIMP_RHOPS RecName: Full=Ribosome maturation factor rimP
 gi|91681172|gb|ABE37474.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           BisB5]
          Length = 262

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 65/183 (35%), Positives = 107/183 (58%), Gaps = 2/183 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
            +  EPR+  + G+A   ++V +PV++ M +R V+I +  E    +QI  ER DG M + 
Sbjct: 12  DTLAEPRLVVEPGVAARFAAVAEPVLQAMGYRLVRIKVSGEAGCTVQIMAERPDGTMLID 71

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR SDF R++GH+V  E+ +    
Sbjct: 72  DCEAVSRALSPVLDVTDPIDRAYRLEISSPGIDRPLVRSSDFARYSGHLVKIEMAVPHQG 131

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G + G       +++E  G     +  + +    +  ARL++TDEL+  S+    
Sbjct: 132 RKRYRGLLDGVEGDAIRIQRE--GVTKDEDPLVLLPMHDIGDARLVLTDELVAESMRRGK 189

Query: 188 SYA 190
              
Sbjct: 190 QAE 192


>gi|158421641|ref|YP_001522933.1| hypothetical protein AZC_0017 [Azorhizobium caulinodans ORS 571]
 gi|158328530|dbj|BAF86015.1| uncharacterized protein [Azorhizobium caulinodans ORS 571]
          Length = 329

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 66/190 (34%), Positives = 109/190 (57%), Gaps = 2/190 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T       EPR+  + G+A  I++++ PV+ +++ R V++ +        QI  ER 
Sbjct: 39  MNETVEALDPNEPRLITESGVAARIAAIVTPVLADLNLRLVRVKVTARDGGTCQIMAERP 98

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE  S+AISP+LDVE+ I G YRLE+SSPGIDRP+VR +DF RW GH V  E
Sbjct: 99  DGSMTIDDCEAASRAISPVLDVEDPITGAYRLEISSPGIDRPLVRLTDFDRWAGHEVKVE 158

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           + +    +++  G ++GT      +++         E ++++    +  A+L++TD L+ 
Sbjct: 159 MAVPVDGRKRFRGILIGTRAELAVVKRTD--APKGEEPEVSLPVADIGEAKLVLTDALIT 216

Query: 181 ASLNNYGSYA 190
            +L    +  
Sbjct: 217 EALRRAKAAE 226


>gi|170740832|ref|YP_001769487.1| hypothetical protein M446_2614 [Methylobacterium sp. 4-46]
 gi|259585789|sp|B0UL53|RIMP_METS4 RecName: Full=Ribosome maturation factor rimP
 gi|168195106|gb|ACA17053.1| protein of unknown function DUF150 [Methylobacterium sp. 4-46]
          Length = 201

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/183 (33%), Positives = 99/183 (54%), Gaps = 2/183 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
           H   E R+  + G+A  ++ +++P +E + FR V++ +  +    +QI  ER DG MT+ 
Sbjct: 7   HHATEKRLITETGVAARVAQIVEPSLEGLGFRLVRVRVTGQNGCTVQIMAERPDGTMTVE 66

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE +S+ ISP+LDV++ I   Y LE+SSPGIDRP+VR  DF RW GH    E+ +    
Sbjct: 67  DCEAVSRTISPLLDVDDPIGRAYHLEISSPGIDRPLVRAGDFARWAGHEAKVELAVPLEG 126

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G I         +  +    K+       +    +  A L++TD+L+R SL    
Sbjct: 127 RKRFRGLIRAPEGATVRI--DLPDAKEGTPASYELRLADIGEAHLVLTDDLIRESLRRGS 184

Query: 188 SYA 190
           + A
Sbjct: 185 APA 187


>gi|163852119|ref|YP_001640162.1| hypothetical protein Mext_2700 [Methylobacterium extorquens PA1]
 gi|218530877|ref|YP_002421693.1| hypothetical protein Mchl_2926 [Methylobacterium chloromethanicum
           CM4]
 gi|259585785|sp|B7KQK1|RIMP_METC4 RecName: Full=Ribosome maturation factor rimP
 gi|259585786|sp|A9W685|RIMP_METEP RecName: Full=Ribosome maturation factor rimP
 gi|163663724|gb|ABY31091.1| protein of unknown function DUF150 [Methylobacterium extorquens
           PA1]
 gi|218523180|gb|ACK83765.1| protein of unknown function DUF150 [Methylobacterium
           chloromethanicum CM4]
          Length = 251

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/184 (34%), Positives = 100/184 (54%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGRTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ +   Y LEVSSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECEAVSRAISPILDLEDPVGDAYYLEVSSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
            +++  G I   S  G  +  +    K     +I +    L  A L++TDEL+R SL   
Sbjct: 121 GRKRFRGIIGVPSADGTTVPIDLPDVKPGLPSRIDVPLRDLGEAHLVLTDELIRESLRRG 180

Query: 187 GSYA 190
            +  
Sbjct: 181 SAPP 184


>gi|254561863|ref|YP_003068958.1| hypothetical protein METDI3462 [Methylobacterium extorquens DM4]
 gi|254269141|emb|CAX25105.1| conserved hypothetical protein, UPF0090 protein [Methylobacterium
           extorquens DM4]
          Length = 251

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/184 (34%), Positives = 100/184 (54%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGRTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ +   Y LEVSSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECEAVSRAISPILDLEDPVGDAYYLEVSSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
            +++  G I   S  G  +  +    K     +I +    L  A L++TDEL+R SL   
Sbjct: 121 GRKRFRGIIGVPSADGTTVPIDLPDVKPGLPSRIDVPLRDLGEAHLVLTDELIRESLRRG 180

Query: 187 GSYA 190
            +  
Sbjct: 181 SAPP 184


>gi|182678036|ref|YP_001832182.1| hypothetical protein Bind_1050 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|259585728|sp|B2IIK0|RIMP_BEII9 RecName: Full=Ribosome maturation factor rimP
 gi|182633919|gb|ACB94693.1| protein of unknown function DUF150 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 314

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 60/185 (32%), Positives = 101/185 (54%), Gaps = 6/185 (3%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
           +EPR+  + G+A  ++ +  PV+ ++  R V++ +  +    +QI  ER DG M +  CE
Sbjct: 26  HEPRLLQESGIAARVAVLAAPVLADLGLRLVRVKISGQNGTTVQIMAERPDGTMDVEACE 85

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDVE+ ++  Y LE+SSPGIDRP+VR SDF R  G  V  E+      +++
Sbjct: 86  SVSEALSPVLDVEDPVKQAYHLEISSPGIDRPLVRLSDFERALGQEVRVELKTGLAGRKR 145

Query: 131 LIGKIMGTS------ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
             G I           +   L   +   K   E ++ +  D L  ARL++T++L+R +L 
Sbjct: 146 FRGTIGPIEASSPIGGSKGALRLTRTDAKPEEETEVLLPLDDLHEARLVLTEDLIRQALR 205

Query: 185 NYGSY 189
              + 
Sbjct: 206 AAKAA 210


>gi|259585810|sp|B8IEB0|RIMP_METNO RecName: Full=Ribosome maturation factor rimP
          Length = 203

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 59/181 (32%), Positives = 96/181 (53%), Gaps = 2/181 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
              E R+  + G+A  ++ +++P +E + FR V++ +  +    +QI  ER DG MT+ D
Sbjct: 11  DAAEKRLITETGVAARVAQIVEPSLEGLGFRLVRVRVTGQNGCTVQIMAERPDGTMTVED 70

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+ ISP+LDV++ I   Y LE+SSPGIDRP+VR  DF RW GH    E+ +    +
Sbjct: 71  CESVSRTISPLLDVDDPIGRAYHLEISSPGIDRPLVRVGDFARWAGHEAKVELTVPLEGR 130

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  G I         +  +    K+       +    +  A L++TD L+R SL    +
Sbjct: 131 KRFRGIIRAPEGESVRI--DLPDAKEGTPASYDLRLRDIGEAHLVLTDALIRESLRRGSA 188

Query: 189 Y 189
            
Sbjct: 189 P 189


>gi|154244253|ref|YP_001415211.1| hypothetical protein Xaut_0296 [Xanthobacter autotrophicus Py2]
 gi|259645219|sp|A7IC11|RIMP_XANP2 RecName: Full=Ribosome maturation factor rimP
 gi|154158338|gb|ABS65554.1| protein of unknown function DUF150 [Xanthobacter autotrophicus Py2]
          Length = 286

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 2/184 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           L    EPR+  + G+A  ++++   V+  + +R V++ +       LQI  ER DG M++
Sbjct: 8   LDDPNEPRLITETGVAARVAAIASGVLGALGYRLVRVKVTNRDGGTLQIMAERPDGTMSI 67

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DCE  S+A+SP+LDVE+ I   YRLE+SSPGIDRP+VR+SDF+RW GH V  E+     
Sbjct: 68  DDCEAASRALSPVLDVEDPISSAYRLEMSSPGIDRPLVRQSDFVRWAGHEVKVEMARPVD 127

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
            +++  G ++G  +    + +         E  + +    +  A+L++TD L+R +L   
Sbjct: 128 GRKRFRGILIGAEDGIAVVRRLD--APATEEPTVRLPVADIHDAKLMLTDALIREALRAA 185

Query: 187 GSYA 190
            +  
Sbjct: 186 KAAG 189


>gi|240139448|ref|YP_002963923.1| hypothetical protein MexAM1_META1p2893 [Methylobacterium extorquens
           AM1]
 gi|240009420|gb|ACS40646.1| conserved hypothetical protein, UPF0090 protein [Methylobacterium
           extorquens AM1]
          Length = 251

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 64/184 (34%), Positives = 100/184 (54%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGRTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ +   Y LEVSSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECEAVSRAISPILDLEDPVGDAYYLEVSSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
            +++  G I   S  G  +  +    K     +I +    L  A L++TDEL+R SL   
Sbjct: 121 GRKRFRGIIGVPSADGTTVPIDLPDVKPGLLSRIDVPLRDLGEAHLVLTDELIRESLRRG 180

Query: 187 GSYA 190
            +  
Sbjct: 181 SAPP 184


>gi|39933516|ref|NP_945792.1| hypothetical protein RPA0439 [Rhodopseudomonas palustris CGA009]
 gi|51316646|sp|Q6NCN2|RIMP_RHOPA RecName: Full=Ribosome maturation factor rimP
 gi|39647362|emb|CAE25883.1| DUF150 [Rhodopseudomonas palustris CGA009]
          Length = 259

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 2/183 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
               EPR+  + G+A    +V +PV+  M +R V+I +  +    +QI  ER DG M + 
Sbjct: 12  DDLAEPRLVIEPGVAARFCAVAEPVLMAMGYRLVRIKVSGDAGCTVQIMAERPDGTMLID 71

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ +    
Sbjct: 72  DCEAVSRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFARYAGHLVKIEMAVPHQG 131

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G + G       +++E   +    +  + +    +  ARL++TDEL+  S+    
Sbjct: 132 RKRYRGLLDGVEGDAVRVQREGATKD--EDPLVLLPMHDIGDARLVLTDELIAESMRRGK 189

Query: 188 SYA 190
              
Sbjct: 190 QAE 192


>gi|188582067|ref|YP_001925512.1| hypothetical protein Mpop_2822 [Methylobacterium populi BJ001]
 gi|259585787|sp|B1ZDR1|RIMP_METPB RecName: Full=Ribosome maturation factor rimP
 gi|179345565|gb|ACB80977.1| protein of unknown function DUF150 [Methylobacterium populi BJ001]
          Length = 255

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/184 (33%), Positives = 101/184 (54%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           +    E R+  + G+A  ++ +++  IE + FR V++ +       +QI  ER DG M +
Sbjct: 1   MAEPTEKRLVSETGVAARVAQIVEGPIEGLGFRLVRVKISNTNGCTVQIMAERPDGTMGV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            +CE +S+AISPILD+E+ + G Y LE+SSPGIDRP+VR SDF RW G+    E+ +   
Sbjct: 61  DECETVSRAISPILDLEDPVGGAYYLEISSPGIDRPLVRVSDFERWAGYEAKVELAVPMD 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
            +++  G +   S  G  +  +    K     +I +    L  A L++TD+L+R SL   
Sbjct: 121 GRKRFRGILGVPSADGATVPIDLPDVKPGLPSRIDLPLRDLGEAHLVLTDDLIRESLRRG 180

Query: 187 GSYA 190
            +  
Sbjct: 181 SAPP 184


>gi|192288874|ref|YP_001989479.1| hypothetical protein Rpal_0443 [Rhodopseudomonas palustris TIE-1]
 gi|226706186|sp|B3QAB7|RIMP_RHOPT RecName: Full=Ribosome maturation factor rimP
 gi|192282623|gb|ACE99003.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           TIE-1]
          Length = 259

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 2/183 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
               EPR+  + G+A    +V +PV+  M +R V+I +  +    +QI  ER DG M + 
Sbjct: 12  DDLAEPRLVIEPGVAARFCAVAEPVLMAMGYRLVRIKVSGDAGCTVQIMAERPDGTMLID 71

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DCE  S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ +    
Sbjct: 72  DCEAASRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFARYAGHLVKIEMAVPHQG 131

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G + G       +++E   +    +  + +    +  ARL++TDEL+  S+    
Sbjct: 132 RKRYRGLLDGVEGDAVRVQREGATKD--EDPLVLLPMHDIGDARLVLTDELIAESMRRGK 189

Query: 188 SYA 190
              
Sbjct: 190 QAE 192


>gi|259585702|sp|A8IG16|RIMP_AZOC5 RecName: Full=Ribosome maturation factor rimP
          Length = 291

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/190 (34%), Positives = 109/190 (57%), Gaps = 2/190 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T       EPR+  + G+A  I++++ PV+ +++ R V++ +        QI  ER 
Sbjct: 1   MNETVEALDPNEPRLITESGVAARIAAIVTPVLADLNLRLVRVKVTARDGGTCQIMAERP 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE  S+AISP+LDVE+ I G YRLE+SSPGIDRP+VR +DF RW GH V  E
Sbjct: 61  DGSMTIDDCEAASRAISPVLDVEDPITGAYRLEISSPGIDRPLVRLTDFDRWAGHEVKVE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           + +    +++  G ++GT      +++         E ++++    +  A+L++TD L+ 
Sbjct: 121 MAVPVDGRKRFRGILIGTRAELAVVKRTD--APKGEEPEVSLPVADIGEAKLVLTDALIT 178

Query: 181 ASLNNYGSYA 190
            +L    +  
Sbjct: 179 EALRRAKAAE 188


>gi|118590497|ref|ZP_01547899.1| hypothetical protein SIAM614_02941 [Stappia aggregata IAM 12614]
 gi|118436960|gb|EAV43599.1| hypothetical protein SIAM614_02941 [Stappia aggregata IAM 12614]
          Length = 197

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/181 (36%), Positives = 109/181 (60%), Gaps = 2/181 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S +EPRI  + GL   ++++++PVIE++ +R V+  +  +    LQI  ER DG MT+ D
Sbjct: 2   SAHEPRIVTEQGLDARVAAIVEPVIEDLGYRLVRTKISAQNGCTLQIMAERPDGTMTVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP LDVE+ I   Y LEVSSPGIDRP+VR  DF RW GH +  E+ +    +
Sbjct: 62  CETVSRAVSPALDVEDPINRAYHLEVSSPGIDRPLVRAGDFNRWAGHELKVEMAVMLDGR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  G ++G       +       ++  E  +A+  +++  A+L++TD+L+ A+L    +
Sbjct: 122 KRFRGTLLGAENGMASIRLPD--VREGEEDTVALPLENIGEAKLVLTDDLITAALQAEKA 179

Query: 189 Y 189
            
Sbjct: 180 A 180


>gi|259417818|ref|ZP_05741737.1| hypothetical protein SCH4B_3234 [Silicibacter sp. TrichCH4B]
 gi|259346724|gb|EEW58538.1| hypothetical protein SCH4B_3234 [Silicibacter sp. TrichCH4B]
          Length = 244

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 5/192 (2%)

Query: 2   ESTHFLHSK-YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
            +  F+        +     +   ++ +I PVIE++ +  V+I L+  K   LQI  +R 
Sbjct: 32  RARFFVFGGLMTNDLIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKATTLQIMADRP 91

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG + + DC  +S A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E
Sbjct: 92  DGGIEVDDCAAISNAVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLE 151

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  +++  G++ G  +    +  E+ GE     + I + FD L  A+L++TD+L++
Sbjct: 152 TADLIDGRRRFKGELAGIEDDEVLINIEEHGET----VTIGLKFDWLSDAKLVLTDDLIK 207

Query: 181 ASLNNYGSYAGL 192
             L    +   L
Sbjct: 208 EMLRQRKAAGVL 219


>gi|222084329|ref|YP_002542858.1| hypothetical protein Arad_0177 [Agrobacterium radiobacter K84]
 gi|221721777|gb|ACM24933.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 246

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 79/183 (43%), Positives = 122/183 (66%), Gaps = 2/183 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             +  EPR+  + GL   I+++I+PVI  M +R V++ L+ +  L LQ+  ER+DG+M +
Sbjct: 52  ADNINEPRLIVETGLDQRIAAIIEPVIVGMDYRLVRVRLMNQNGLTLQVMAERNDGSMNV 111

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           + CEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RWNGH+V CE  +   
Sbjct: 112 QGCEEISTAISPVLDVEDPVDKAYHLEVSSPGIDRPMVRKSDFVRWNGHIVKCETSILVD 171

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           ++++  GKI   ++ GF +E+++       E ++ I F +L  A+LI+TD+L+R +L   
Sbjct: 172 NRKRFRGKITDVNDDGFTIERDQVAY--GEEPKVTIPFSTLAEAKLILTDDLIRDALRAD 229

Query: 187 GSY 189
              
Sbjct: 230 KQA 232


>gi|299133376|ref|ZP_07026571.1| protein of unknown function DUF150 [Afipia sp. 1NLS2]
 gi|298593513|gb|EFI53713.1| protein of unknown function DUF150 [Afipia sp. 1NLS2]
          Length = 264

 Score =  177 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 106/180 (58%), Gaps = 1/180 (0%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           E R+  + G+A  ++++ +PV+E + ++ V+I +  E    +QI  ER DG M + DCE 
Sbjct: 21  ERRLVVEPGVAARVAAIAEPVLEGLGYQLVRIKISGEAGCTVQIMAERPDGTMLIDDCEA 80

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP++DV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ +    +++ 
Sbjct: 81  ISKALSPVMDVADPIQRAYRLEISSPGIDRPLVRQSDFERYTGHLVKIEMSVPHDGRKRF 140

Query: 132 IGKIMGTSETGFFLEKEK-RGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
            G + G       + ++  +  K   E  + +    + SA L++T+EL+  S+       
Sbjct: 141 RGTLEGIENGLVRITRDDVKEHKGAQEADVQLPLADIASANLVLTNELIAESMRRGRDAE 200


>gi|298293855|ref|YP_003695794.1| hypothetical protein Snov_3905 [Starkeya novella DSM 506]
 gi|296930366|gb|ADH91175.1| protein of unknown function DUF150 [Starkeya novella DSM 506]
          Length = 270

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 99/178 (55%), Gaps = 2/178 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G A  ++ ++ PV+E + FR V++ +       LQI  ER DG+  + +CE
Sbjct: 25  DEPRLVTESGPAARVAGIVGPVLEGLGFRLVRVRISGGSPPTLQIMAERPDGSFGIDECE 84

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
             S+AISP+LDVE+ I G Y LE+SSPGIDRP+ R SDF RW GH V  E+ +    +++
Sbjct: 85  AASRAISPVLDVEDPISGAYNLEMSSPGIDRPLARLSDFERWAGHDVKVEMAVPVDGRKR 144

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
             G ++G       +          +   +A+    +  ARL++TD L+R +L    +
Sbjct: 145 FRGILVGAQREEALVRLPDAPADKPD--TVALPISDIGEARLVMTDALIREALRRDKA 200


>gi|27375897|ref|NP_767426.1| hypothetical protein bll0786 [Bradyrhizobium japonicum USDA 110]
 gi|34222841|sp|Q89WA6|RIMP_BRAJA RecName: Full=Ribosome maturation factor rimP
 gi|27349035|dbj|BAC46051.1| bll0786 [Bradyrhizobium japonicum USDA 110]
          Length = 251

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 111/180 (61%), Gaps = 2/180 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  +S+V  PV++ M +R V+I +  E    +QI  ER DG+M + DCE
Sbjct: 15  AEPRLVVEPGVAARVSAVAGPVLQGMGYRLVRIRISGEAGCTVQIMAERPDGSMQIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ ++   +++
Sbjct: 75  AISRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFERYAGHLVKVEMAVAHEGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
             G I         L+++    K   E  + ++ + +  ARL++TDEL+  S+    + A
Sbjct: 135 FRGMIGAVEGDRVHLQRDD--VKAGEERNVLLTMEDISEARLVLTDELIAESMRRGKAAA 192


>gi|86747723|ref|YP_484219.1| hypothetical protein RPB_0597 [Rhodopseudomonas palustris HaA2]
 gi|123408929|sp|Q2J2K2|RIMP_RHOP2 RecName: Full=Ribosome maturation factor rimP
 gi|86570751|gb|ABD05308.1| Protein of unknown function DUF150 [Rhodopseudomonas palustris
           HaA2]
          Length = 259

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A    +V +PV+  M +R V+I +  E    +QI  ER DG M + DCE
Sbjct: 15  DEPRLVVEPGVAARFGAVAEPVLLAMGYRLVRIKVSAEAGCTVQIMAERPDGTMLIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDV + IE  YRLE+SSPGIDRP+VR+SDF R++GH+V  E+ +    +++
Sbjct: 75  AVSKALSPVLDVTDPIEKAYRLEISSPGIDRPLVRRSDFARYSGHLVKIEMAVPHQGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
             G + G       +++E        +  + +    +  ARL++TDEL+  S+       
Sbjct: 135 YRGLLDGVEGDAIRIQREG---VKDEDPLVLLPMHDIGDARLVLTDELIAESMRRGKQAE 191


>gi|49475030|ref|YP_033071.1| hypothetical protein BH02180 [Bartonella henselae str. Houston-1]
 gi|51316602|sp|Q6G4W4|RIMP_BARHE RecName: Full=Ribosome maturation factor rimP
 gi|49237835|emb|CAF27030.1| hypothetical protein BH02180 [Bartonella henselae str. Houston-1]
          Length = 216

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/188 (40%), Positives = 115/188 (61%), Gaps = 2/188 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T  +    EPR+F + G+   I++ + P+++ + FR V++ LL    L LQI VER 
Sbjct: 9   MSKTERISDIDEPRLFEENGVEAHIAAFVMPLLKPLGFRLVRVKLLGLNGLTLQIMVERP 68

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE +S+ +SP+LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 69  DGSMTVEDCETVSRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHIAKIE 128

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    ++K  G +   ++ GF L  +K        + I+I FD ++ A L++TDEL+R
Sbjct: 129 TKIILEGRRKFRGTLTNITQDGFTLNTDKAAY--GESMYISIPFDDIIDAHLVLTDELIR 186

Query: 181 ASLNNYGS 188
            +L     
Sbjct: 187 DALKKNKD 194


>gi|163733004|ref|ZP_02140448.1| hypothetical protein RLO149_10100 [Roseobacter litoralis Och 149]
 gi|161393539|gb|EDQ17864.1| hypothetical protein RLO149_10100 [Roseobacter litoralis Och 149]
          Length = 231

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K+ +LQI  ++ DG + + DC E+SQ
Sbjct: 40  LIAKAAIDRRMAEIITPVIEDMGFELVRVRLMSGKSTILQIMADKPDGGIEVDDCAEISQ 99

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 100 AVSAVLDVEDPILDEYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETGEMIDGRRRFKGA 159

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E        E  I + FD L  A+L++TD+L++  L    +    
Sbjct: 160 LAGVENDEVLINVE--------EGTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGAF 209


>gi|49473873|ref|YP_031915.1| hypothetical protein BQ02060 [Bartonella quintana str. Toulouse]
 gi|51316597|sp|Q6G0N9|RIMP_BARQU RecName: Full=Ribosome maturation factor rimP
 gi|49239376|emb|CAF25709.1| hypothetical protein BQ02060 [Bartonella quintana str. Toulouse]
          Length = 216

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 74/188 (39%), Positives = 118/188 (62%), Gaps = 2/188 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T  ++   EPR+F + G+   +++++ P+++ + FR V++ LL +  L LQI VER 
Sbjct: 9   MRKTEKMNDIDEPRLFEETGIEAFVAALVIPLLKPLDFRLVRVKLLGQNGLTLQIMVERA 68

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE +S+ +S +LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 69  DGSMTIEDCETVSRTVSHLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHIAKIE 128

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             ++   ++K  G +   ++ G  L  +K        + IAI FD+++ A L++TDEL+R
Sbjct: 129 TKITIDGRKKFRGILANITQEGLTLNTDKAAY--GEAMYIAIPFDNIIDAHLVLTDELIR 186

Query: 181 ASLNNYGS 188
            +L     
Sbjct: 187 NALKKNKD 194


>gi|15963989|ref|NP_384342.1| hypothetical protein SMc02911 [Sinorhizobium meliloti 1021]
 gi|307306401|ref|ZP_07586145.1| protein of unknown function DUF150 [Sinorhizobium meliloti BL225C]
 gi|307319288|ref|ZP_07598717.1| protein of unknown function DUF150 [Sinorhizobium meliloti AK83]
 gi|34222989|sp|Q92SW6|RIMP_RHIME RecName: Full=Ribosome maturation factor rimP
 gi|15073165|emb|CAC41673.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306895124|gb|EFN25881.1| protein of unknown function DUF150 [Sinorhizobium meliloti AK83]
 gi|306902243|gb|EFN32840.1| protein of unknown function DUF150 [Sinorhizobium meliloti BL225C]
          Length = 205

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 84/181 (46%), Positives = 120/181 (66%), Gaps = 2/181 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T    +  EPR+  + GL   ++ +I+PV+ +M FR V++ +  +  L LQ+  ER+
Sbjct: 1   MSDTTTAENTNEPRLITETGLDRRVADIIEPVLVDMGFRLVRVRMSGQNGLTLQVMTERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCEE+S+AISP+LDVE+ I+  Y LEVSSPGIDRPMVR+SDF+RW GH+V CE
Sbjct: 61  DGTMTVEDCEEVSKAISPVLDVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +++  GKI+   E GF LE+++       E  +AI F +L  ARLI+TDEL+R
Sbjct: 121 TSVMVDGRKRFRGKIVSVDEDGFRLERDQPAY--GEEAAVAIPFTALSEARLILTDELIR 178

Query: 181 A 181
            
Sbjct: 179 D 179


>gi|327192407|gb|EGE59367.1| hypothetical protein RHECNPAF_224004 [Rhizobium etli CNPAF512]
          Length = 201

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 80/187 (42%), Positives = 124/187 (66%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M       ++ EPR+  + GL   ++ +I+PV+  M FR +++ +L +  + +Q+  ER+
Sbjct: 1   MSDMTNADNELEPRLITETGLDQRLADIIEPVLVGMGFRLIRVRMLNQNGMTMQVMAERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT++DCEE+S AISP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE
Sbjct: 61  DGTMTVQDCEEVSMAISPVLDVEDPIDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +  G++++  GKI+     GF LE+++       E +++I F +L  A+LI+TD+L+R
Sbjct: 121 TSIMIGNRKRFRGKIVEADADGFTLERDQIAY--GEEPKVSIPFTALSDAKLILTDDLIR 178

Query: 181 ASLNNYG 187
            +L    
Sbjct: 179 DALRADK 185


>gi|328545920|ref|YP_004306029.1| ribosome maturation factor rimP [polymorphum gilvum SL003B-26A1]
 gi|326415660|gb|ADZ72723.1| Ribosome maturation factor rimP [Polymorphum gilvum SL003B-26A1]
          Length = 205

 Score =  174 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 65/178 (36%), Positives = 108/178 (60%), Gaps = 2/178 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
           +E RI  + GL   ++++++PVIE++ +R V++ +       LQI  ER DG MT+ DCE
Sbjct: 4   HEARIVIEQGLEARVAAIVEPVIEDLGYRLVRVKISAANGCTLQIMAERPDGTMTVEDCE 63

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           E+S+A+SP LDV++ I   Y LE+SSPGIDRP+VR  DF RW+GHV   E+ +    +++
Sbjct: 64  EVSRAVSPALDVDDPINRAYHLEISSPGIDRPLVRVGDFDRWSGHVAKVEMSVMQDGRKR 123

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
             G ++G  +    L      +   +  ++ +    +  ARL++TD+L+RA+L    +
Sbjct: 124 FRGILLGAGDGTVRLRLTDTPKDVAD--EVRLPLAEIAEARLVLTDDLIRAALQAEKA 179


>gi|92115661|ref|YP_575390.1| hypothetical protein Nham_0028 [Nitrobacter hamburgensis X14]
 gi|122418985|sp|Q1QS67|RIMP_NITHX RecName: Full=Ribosome maturation factor rimP
 gi|91798555|gb|ABE60930.1| protein of unknown function DUF150 [Nitrobacter hamburgensis X14]
          Length = 263

 Score =  174 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 113/180 (62%), Gaps = 2/180 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  +SSV+ PV++ M +R V+I +  E    +QI  ER DG+M + DCE
Sbjct: 15  DEPRLVVEPGVAARVSSVVAPVLQGMGYRLVRIKVSGEYGCTVQIMAERPDGSMQIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R  GH+V  E+ ++   +++
Sbjct: 75  AISKALSPVLDVADPIDKAYRLEISSPGIDRPLVRRSDFERHAGHLVKVEMAVAHQGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
             G + G  +    L ++    ++++E ++ +  + +  ARL++TDEL+  S+       
Sbjct: 135 FRGILQGVKDNAIRLHRDD--VQNVDESEVLLVMEDIADARLVLTDELIAESMRRGKIAE 192


>gi|254502830|ref|ZP_05114981.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
 gi|222438901|gb|EEE45580.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
          Length = 198

 Score =  174 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 66/181 (36%), Positives = 105/181 (58%), Gaps = 2/181 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S  EPRI  + GL   ++++I+PVIE++ +R V+  +       LQI  ER DG MT+ D
Sbjct: 2   SDQEPRIVTEQGLDARVAAIIEPVIEDLGYRLVRTRISAANGCTLQIMAERPDGTMTVDD 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP LDVE+ I   Y LEVSSPGIDRP+VR  DF RW GH +  E+ +    +
Sbjct: 62  CETISRAVSPALDVEDPINRAYHLEVSSPGIDRPLVRAGDFDRWAGHEMKVEMDVMQDGR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  G ++G       +      E + +   + +  + +  A+L++TD+L+ A+L    +
Sbjct: 122 KRFRGTLLGVEGVSAKMRLPDAPEGEAD--TVLLPMEDIGEAKLVLTDDLITAALQAEKA 179

Query: 189 Y 189
            
Sbjct: 180 A 180


>gi|85714178|ref|ZP_01045167.1| hypothetical protein NB311A_08478 [Nitrobacter sp. Nb-311A]
 gi|85699304|gb|EAQ37172.1| hypothetical protein NB311A_08478 [Nitrobacter sp. Nb-311A]
          Length = 259

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 108/180 (60%), Gaps = 2/180 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  ++++  PV++ M +R V+I +  E    LQI  ER DG+M + DCE
Sbjct: 15  DEPRLVLEPGVAARVATIAAPVLQGMGYRLVRIKVSGEAGCTLQIMAERPDGSMQIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ +SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+   E+ ++   +++
Sbjct: 75  TISKMLSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFERYAGHLAKVEMAVAHQGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
             G + G  +    L ++    +  N+  + +  + +  ARL++TDEL+  S+       
Sbjct: 135 FRGILRGVEDNAVRLHRDD--VQQDNDADVLLIMEDIADARLVLTDELIAESMRRGKIAE 192


>gi|316931576|ref|YP_004106558.1| hypothetical protein Rpdx1_0181 [Rhodopseudomonas palustris DX-1]
 gi|315599290|gb|ADU41825.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           DX-1]
          Length = 259

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 106/180 (58%), Gaps = 2/180 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A    +V +PV+  M +R V+I +  E    +QI  ER DG M + DCE
Sbjct: 15  AEPRLVIEPGVAARFCAVAEPVLLAMGYRLVRIKVSGEAGCTVQIMAERPDGTMLIDDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+V  E+ ++   +++
Sbjct: 75  AVSRALSPVLDVADPIDRAYRLEISSPGIDRPLVRRSDFARYAGHLVKVEMAVAHQGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
             G + G       +++++       +  + ++   +  ARL++TDEL+  S+       
Sbjct: 135 FRGLLDGVEGDAVRIQRDE--APKGEDPLVLLAMHDIGDARLVLTDELVAESMRRGKQAE 192


>gi|163757747|ref|ZP_02164836.1| hypothetical protein HPDFL43_20092 [Hoeflea phototrophica DFL-43]
 gi|162285249|gb|EDQ35531.1| hypothetical protein HPDFL43_20092 [Hoeflea phototrophica DFL-43]
          Length = 205

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/181 (42%), Positives = 114/181 (62%), Gaps = 2/181 (1%)

Query: 4   THFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN 63
           T    S YEPR+  + G+   I+ +++PV+  +  R V++ L  +  L LQI  ER DG 
Sbjct: 2   TDNAASAYEPRLVTETGVDARIAEIVEPVLASIDMRLVRVRLSGQNGLTLQIMAERTDGT 61

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           MT+ DCE  S+A+SP+LDVE+ +E  Y LE+SSPGIDRP+VRKSDF RW GH+  C+  +
Sbjct: 62  MTVEDCEAASRALSPVLDVEDPVEKAYHLEISSPGIDRPLVRKSDFERWQGHLARCDASV 121

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +++  G I   S+TGF +E+++       E +  I F +L  A+L++TDEL+R SL
Sbjct: 122 LINGRKRFRGFIRDVSDTGFIVERDQPVY--GEENRAEIPFSALAEAKLVLTDELIRESL 179

Query: 184 N 184
            
Sbjct: 180 R 180


>gi|239833210|ref|ZP_04681539.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239825477|gb|EEQ97045.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 240

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 105/179 (58%), Gaps = 2/179 (1%)

Query: 10  KYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDC 69
             + RI  + G+   ++ +++PV+  + FR V++ L       LQI  ER DG MT+ DC
Sbjct: 32  GADERIIRETGIDAKVAGIVEPVLNTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDC 91

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++
Sbjct: 92  ELVSRTVAPVLDVEDPINGKYHLEISSPGIDRPLVRKSDFADWAGHIAKVETSIVHEGRK 151

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           K  G+I+        +E ++      +E  + I FD +  ARL++TD+L+R +L    +
Sbjct: 152 KFRGRIVLGDAESVVIESDQISY--GSEPVVRIPFDLISDARLVLTDDLIRDALRKDKA 208


>gi|190889788|ref|YP_001976330.1| hypothetical protein RHECIAT_CH0000156 [Rhizobium etli CIAT 652]
 gi|259586183|sp|B3PXE6|RIMP_RHIE6 RecName: Full=Ribosome maturation factor rimP
 gi|190695067|gb|ACE89152.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 198

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 79/181 (43%), Positives = 123/181 (67%), Gaps = 2/181 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             ++ EPR+  + GL   ++ +I+PV+  M FR +++ +L +  + +Q+  ER+DG MT+
Sbjct: 4   ADNELEPRLITETGLDQRLADIIEPVLVGMGFRLIRVRMLNQNGMTMQVMAERNDGTMTV 63

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DCEE+S AISP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +  G
Sbjct: 64  QDCEEVSMAISPVLDVEDPIDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSIMIG 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           ++++  GKI+     GF LE+++       E +++I F +L  A+LI+TD+L+R +L   
Sbjct: 124 NRKRFRGKIVEADADGFTLERDQIAY--GEEPKVSIPFTALSDAKLILTDDLIRDALRAD 181

Query: 187 G 187
            
Sbjct: 182 K 182


>gi|254510275|ref|ZP_05122342.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
 gi|221533986|gb|EEE36974.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
          Length = 232

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 4/188 (2%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM 64
             + +     +     +   ++ +I PVIE++ +  V+I L+  K   +QI  ++ DG +
Sbjct: 31  DRVENLMTNNLIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTMQIMADKPDGGI 90

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            + DC E+S A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E    
Sbjct: 91  EVDDCAEISNAVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFETFEGYEAKIETAEL 150

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
              +++  G++ G       +   +  E       I + FD L  A+L++TD+L++  L 
Sbjct: 151 IDGRRRFKGELAGIEGDEVLINIPEGDETI----TIGLQFDWLSDAKLVLTDDLIKEMLR 206

Query: 185 NYGSYAGL 192
                  L
Sbjct: 207 QRKDAGAL 214


>gi|56694992|ref|YP_165338.1| hypothetical protein SPO0064 [Ruegeria pomeroyi DSS-3]
 gi|81350793|sp|Q5LWL1|RIMP_SILPO RecName: Full=Ribosome maturation factor rimP
 gi|56676729|gb|AAV93395.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 208

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVI ++ +  V+I L+  K+  LQI  ++ DG + + DC  +S 
Sbjct: 5   LIAKAAIDRRLAEIVSPVIADLGYELVRIRLMSGKSTTLQIMADKPDGGIEVDDCAAISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETTEMIDGRRRFRGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  ++ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGIEGNEVLINLDQNGET----VTIGLEFDWLSDAKLVLTDDLIKEMLRQRKAAGVL 178


>gi|325291534|ref|YP_004277398.1| hypothetical protein AGROH133_02929 [Agrobacterium sp. H13-3]
 gi|325059387|gb|ADY63078.1| hypothetical protein AGROH133_02929 [Agrobacterium sp. H13-3]
          Length = 198

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 74/178 (41%), Positives = 114/178 (64%), Gaps = 2/178 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             + +EPR+  + G+   I+ +I+PV+  M +  V++ L  +  + LQ+  ER+DG MT+
Sbjct: 2   ADTVHEPRLITETGIDQRIAEIIEPVLTGMGYLLVRVRLSNQNGMTLQVMAEREDGTMTV 61

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
             CE +S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF RW GH+V  E  +   
Sbjct: 62  EGCEAVSMAISPVLDVEDPVDKAYHLEVSSPGIDRPMVRKSDFTRWQGHLVKAETSILVE 121

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           ++++  GKI+     GF LE+++      +E  + I F +L  A+LI+TD+L+R +L 
Sbjct: 122 NRKRFRGKIVEVDADGFKLERDQIAY--GDEPTVTIPFSALSDAKLILTDDLIRDALR 177


>gi|254780789|ref|YP_003065202.1| hypothetical protein CLIBASIA_03400 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040466|gb|ACT57262.1| hypothetical protein CLIBASIA_03400 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 192

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 192/192 (100%), Positives = 192/192 (100%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD
Sbjct: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE
Sbjct: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR
Sbjct: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180

Query: 181 ASLNNYGSYAGL 192
           ASLNNYGSYAGL
Sbjct: 181 ASLNNYGSYAGL 192


>gi|114705361|ref|ZP_01438269.1| hypothetical protein FP2506_10491 [Fulvimarina pelagi HTCC2506]
 gi|114540146|gb|EAU43266.1| hypothetical protein FP2506_10491 [Fulvimarina pelagi HTCC2506]
          Length = 202

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 106/180 (58%), Gaps = 2/180 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           ++ E RI  + GL   I+S+++P IE+  +R V++ +       +QI  ER DG M +  
Sbjct: 2   TEKETRIVTEDGLEAKIASIVEPAIEQTGYRLVRVRVSGMNGKTVQIMAERPDGTMDVEG 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S+AISP+L+ E+ ++G Y LE+SSPGIDRP+VR SDF  W G ++  E      D+
Sbjct: 62  CEEVSRAISPVLETEDPVDGAYHLELSSPGIDRPLVRVSDFETWAGFLMKLETSRLVADR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
           ++  GKI+        +E+++          + I  D++  ARL++TD+L+ ASL    +
Sbjct: 122 KRYRGKIVKVENGTITIERDQPAY--GEPASVEIPLDAVADARLVLTDDLIEASLKADKA 179


>gi|150398624|ref|YP_001329091.1| hypothetical protein Smed_3438 [Sinorhizobium medicae WSM419]
 gi|166990840|sp|A6UF26|RIMP_SINMW RecName: Full=Ribosome maturation factor rimP
 gi|150030139|gb|ABR62256.1| protein of unknown function DUF150 [Sinorhizobium medicae WSM419]
          Length = 205

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 81/181 (44%), Positives = 119/181 (65%), Gaps = 2/181 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M  T    +  EPR+  + GL   ++ +I+PV+ ++ FR V++ +  +  L LQ+  ER+
Sbjct: 1   MSDTTTAENANEPRLITETGLDRRVADIIEPVLVDLGFRLVRVRMSGQNGLTLQVMTERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCEE+S+AISP+LDVE+ I+  Y LEVSSPGIDRPMVR+SDF+RW GH++ CE
Sbjct: 61  DGTMTVEDCEEVSKAISPVLDVEDPIDKAYHLEVSSPGIDRPMVRRSDFIRWQGHLLKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +++  GKI+   E GF LE+++       E  + I F +L  ARLI+TDEL+R
Sbjct: 121 TSVLVEGRKRFRGKIVSVDEDGFRLERDQPAY--GEEAGVTIPFTALSEARLILTDELIR 178

Query: 181 A 181
            
Sbjct: 179 D 179


>gi|86355779|ref|YP_467671.1| hypothetical protein RHE_CH00119 [Rhizobium etli CFN 42]
 gi|123513435|sp|Q2KDZ2|RIMP_RHIEC RecName: Full=Ribosome maturation factor rimP
 gi|86279881|gb|ABC88944.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 198

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 79/181 (43%), Positives = 121/181 (66%), Gaps = 2/181 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             ++ EPR+  + GL   ++ +I+PV+  M FR +++ +L +    +Q+  ER+DG MT+
Sbjct: 4   ADNELEPRLITETGLDQRLADIIEPVLVGMGFRLIRVRMLNQNGATMQVMAERNDGTMTV 63

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DCEE+S AISP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE  +  G
Sbjct: 64  QDCEEVSMAISPVLDVEDPIDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSIMIG 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           ++++  GKI+     GF LE+++       E ++ I F +L  A+LI+TD+L+R +L   
Sbjct: 124 NRKRFRGKIVEADADGFTLERDQVAY--GEEQKVIIPFTALSDAKLILTDDLIRDALRAD 181

Query: 187 G 187
            
Sbjct: 182 K 182


>gi|259586221|sp|Q21C34|RIMP_RHOPB RecName: Full=Ribosome maturation factor rimP
          Length = 262

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 106/180 (58%), Gaps = 2/180 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + GL   +++V  PV++ M +R V+I +  E    +QI  ER DG M + DCE
Sbjct: 15  AEPRLVVEPGLGARVAAVAGPVLQGMGYRLVRIKVSGELGCTVQIMAERPDGTMLVEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S A+SP+LD+ + +E  YRLE+SSPGIDRP+VR+SDF R+ G++V  E+ ++ G +++
Sbjct: 75  AISHALSPVLDIADPVERAYRLEISSPGIDRPLVRRSDFERYEGYLVKIEMAVAVGGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
             G +         L +E  G +D  +    +  + + SA L++TDEL+  S+       
Sbjct: 135 FRGLLGPLQGDAVLLARE--GARDGEDPNSLLPLEDIASANLVLTDELIAESMRRGKIAE 192


>gi|15887444|ref|NP_353125.1| hypothetical protein Atu0090 [Agrobacterium tumefaciens str. C58]
 gi|34222929|sp|Q8UJ48|RIMP_AGRT5 RecName: Full=Ribosome maturation factor rimP
 gi|15154957|gb|AAK85910.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 198

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 113/178 (63%), Gaps = 2/178 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             +  EPR+  + G+   I+ +I+PV+  M +  V++ L  +  + LQ+  ER+DG M +
Sbjct: 2   ADTAQEPRLITETGIDQRIAEIIEPVLTGMGYLLVRVRLSNQNGMTLQVMAEREDGTMNV 61

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           +DCE +S AISP+LDVE+ +E  Y LEVSSPGIDRPMVRK+DF RW GH+V  E  +   
Sbjct: 62  QDCEAISMAISPVLDVEDPVEKAYHLEVSSPGIDRPMVRKTDFTRWQGHLVKVETSILVE 121

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           ++++  GKI+      F LE+++       E  + + F++L  A+LI+TD+L+R +L 
Sbjct: 122 NRKRFRGKIVEVDADSFKLERDQIAY--GEEPTVVVPFNALSDAKLILTDDLIRDALR 177


>gi|90422001|ref|YP_530371.1| hypothetical protein RPC_0477 [Rhodopseudomonas palustris BisB18]
 gi|90104015|gb|ABD86052.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           BisB18]
          Length = 272

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 106/180 (58%), Gaps = 2/180 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + GL   +++V  PV++ M +R V+I +  E    +QI  ER DG M + DCE
Sbjct: 25  AEPRLVVEPGLGARVAAVAGPVLQGMGYRLVRIKVSGELGCTVQIMAERPDGTMLVEDCE 84

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S A+SP+LD+ + +E  YRLE+SSPGIDRP+VR+SDF R+ G++V  E+ ++ G +++
Sbjct: 85  AISHALSPVLDIADPVERAYRLEISSPGIDRPLVRRSDFERYEGYLVKIEMAVAVGGRKR 144

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
             G +         L +E  G +D  +    +  + + SA L++TDEL+  S+       
Sbjct: 145 FRGLLGPLQGDAVLLARE--GARDGEDPNSLLPLEDIASANLVLTDELIAESMRRGKIAE 202


>gi|254718199|ref|ZP_05180010.1| hypothetical protein Bru83_01396 [Brucella sp. 83/13]
 gi|265983157|ref|ZP_06095892.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306837713|ref|ZP_07470582.1| Protein of unknown function DUF150 [Brucella sp. NF 2653]
 gi|306843579|ref|ZP_07476180.1| Protein of unknown function DUF150 [Brucella sp. BO1]
 gi|264661749|gb|EEZ32010.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306276270|gb|EFM57970.1| Protein of unknown function DUF150 [Brucella sp. BO1]
 gi|306407271|gb|EFM63481.1| Protein of unknown function DUF150 [Brucella sp. NF 2653]
          Length = 219

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+L+R 
Sbjct: 128 SIVHEGRKKFRGRIVVGDADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|241207072|ref|YP_002978168.1| hypothetical protein Rleg_4390 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860962|gb|ACS58629.1| protein of unknown function DUF150 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 201

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 77/187 (41%), Positives = 122/187 (65%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M       ++ EPR+  + GL   ++ +I+PV+ ++ FR +++ ++ +    +Q+  ERD
Sbjct: 1   MSDLTNADNEREPRLITETGLDQRLADIIEPVLVDLGFRLIRVRMMNQNGATMQVMAERD 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT++DCEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE
Sbjct: 61  DGTMTVQDCEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +   ++++  GKI+     GF LE+++       E ++ I F +L  A+LI+TD+L+R
Sbjct: 121 TSILIDNRKRFRGKIVEAGTDGFTLERDQIAY--GEEQKVTIPFTALSDAKLILTDDLIR 178

Query: 181 ASLNNYG 187
            +L    
Sbjct: 179 DALRADK 185


>gi|116249894|ref|YP_765732.1| hypothetical protein RL0128 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|166977860|sp|Q1MN36|RIMP_RHIL3 RecName: Full=Ribosome maturation factor rimP
 gi|115254542|emb|CAK05616.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 201

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 76/187 (40%), Positives = 122/187 (65%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M       ++ EPR+  + GL   ++ +I+PV+ ++ FR +++ ++ +    +Q+  ER+
Sbjct: 1   MSDLTNADNEREPRLITETGLDQRLADIIEPVLVDLGFRLIRVRMMNQNGATMQVMAERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT++DCEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE
Sbjct: 61  DGTMTVQDCEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +   ++++  GKI+     GF LE+++       E ++ I F +L  A+LI+TD+L+R
Sbjct: 121 TSILIDNRKRFRGKIVEAGTDGFTLERDQIAY--GEEQKVTIPFTALSDAKLILTDDLIR 178

Query: 181 ASLNNYG 187
            +L    
Sbjct: 179 DALRADK 185


>gi|254465218|ref|ZP_05078629.1| hypothetical protein RBY4I_1824 [Rhodobacterales bacterium Y4I]
 gi|206686126|gb|EDZ46608.1| hypothetical protein RBY4I_1824 [Rhodobacterales bacterium Y4I]
          Length = 196

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ +  V+I L+  K+  LQI  ++ +G + + DC E+S 
Sbjct: 5   LIAKAAIDRRLAEIVTPVIEDLGYELVRIRLMSGKSTTLQIMADKPNGGIEVDDCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E   + G +++  G+
Sbjct: 65  AVSAALDVEDPIIDAYALEVSSPGIDRPLTRMKDFEMFEGYEAKLETAETVGGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT      +  E +G+     + + + FD L  A+L++TD+L++  L        L
Sbjct: 125 LAGTEGDEVLINIEDQGQT----VTVGLKFDWLSDAKLVLTDDLIKEMLRQRKEAGTL 178


>gi|259585712|sp|B9JGT7|RIMP_AGRRK RecName: Full=Ribosome maturation factor rimP
          Length = 198

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 79/183 (43%), Positives = 122/183 (66%), Gaps = 2/183 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
             +  EPR+  + GL   I+++I+PVI  M +R V++ L+ +  L LQ+  ER+DG+M +
Sbjct: 4   ADNINEPRLIVETGLDQRIAAIIEPVIVGMDYRLVRVRLMNQNGLTLQVMAERNDGSMNV 63

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
           + CEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RWNGH+V CE  +   
Sbjct: 64  QGCEEISTAISPVLDVEDPVDKAYHLEVSSPGIDRPMVRKSDFVRWNGHIVKCETSILVD 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           ++++  GKI   ++ GF +E+++       E ++ I F +L  A+LI+TD+L+R +L   
Sbjct: 124 NRKRFRGKITDVNDDGFTIERDQVAY--GEEPKVTIPFSTLAEAKLILTDDLIRDALRAD 181

Query: 187 GSY 189
              
Sbjct: 182 KQA 184


>gi|119385318|ref|YP_916374.1| hypothetical protein Pden_2591 [Paracoccus denitrificans PD1222]
 gi|259586172|sp|A1B584|RIMP_PARDP RecName: Full=Ribosome maturation factor rimP
 gi|119375085|gb|ABL70678.1| protein of unknown function DUF150 [Paracoccus denitrificans
           PD1222]
          Length = 206

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/176 (32%), Positives = 90/176 (51%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V+I L   K   LQI  +R +G + + DC ++S 
Sbjct: 4   LIAKTAIDRRLAEIISPVIEDLGFELVRIRLQGGKTATLQIMADRPEGGINVDDCADIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S ILDVE+ +E  Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 64  AVSAILDVEDPLEDAYHLEVSSPGIDRPLTRLKDFETFEGYEARLETNQPIDGRKRFKGV 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G  +     E     E+      I ++FD L  A+L++TDEL+   L       
Sbjct: 124 LAGVEKGEGGDEVLLNIEEGGETQTIGLNFDWLSDAKLVLTDELIAEMLRQKKDAG 179


>gi|153008086|ref|YP_001369301.1| hypothetical protein Oant_0750 [Ochrobactrum anthropi ATCC 49188]
 gi|167016790|sp|A6WWW8|RIMP_OCHA4 RecName: Full=Ribosome maturation factor rimP
 gi|151559974|gb|ABS13472.1| protein of unknown function DUF150 [Ochrobactrum anthropi ATCC
           49188]
          Length = 224

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
                L +  + RI  + G+   ++S+I+PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NEAETLAAGADERIIRETGIDAKVASIIEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFADWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      +E  + I FD +  ARL++TD+L+R 
Sbjct: 128 SVVHEGRKKFRGRIVLGDAESVVIESDQISY--GSEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|148251678|ref|YP_001236263.1| hypothetical protein BBta_0054 [Bradyrhizobium sp. BTAi1]
 gi|166919104|sp|A5E863|RIMP_BRASB RecName: Full=Ribosome maturation factor rimP
 gi|146403851|gb|ABQ32357.1| hypothetical protein BBta_0054 [Bradyrhizobium sp. BTAi1]
          Length = 253

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/179 (34%), Positives = 109/179 (60%), Gaps = 2/179 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  +++V +PV++ M +R V+I +  E    +Q+  ER DG M + DCE 
Sbjct: 16  EPRLVVEPGVAARVAAVAEPVLQGMGYRLVRIRISGEAGCTVQVMAERPDGTMQIEDCEA 75

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LD+ + I+  YRLE+SSPGIDRP+VR++DF R  GH+V  E+ ++  ++++ 
Sbjct: 76  VSRALSPVLDIADPIDRAYRLEISSPGIDRPLVRRTDFERHIGHLVKIEMAVAHQNRKRF 135

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
            G I G    G  + ++   +    +  + +    +  A+L++TDEL+  S+    +  
Sbjct: 136 RGIITGLDGDGVCITRDDVAKD--QDPSVVLPMTDIGDAKLVLTDELIAESMRRGKAAE 192


>gi|17988251|ref|NP_540885.1| hypothetical protein BMEI1968 [Brucella melitensis bv. 1 str. 16M]
 gi|23503010|ref|NP_699137.1| hypothetical protein BR2162 [Brucella suis 1330]
 gi|148560565|ref|YP_001259956.1| hypothetical protein BOV_2074 [Brucella ovis ATCC 25840]
 gi|161620070|ref|YP_001593957.1| hypothetical protein BCAN_A2204 [Brucella canis ATCC 23365]
 gi|163844175|ref|YP_001628580.1| hypothetical protein BSUIS_A1999 [Brucella suis ATCC 23445]
 gi|225853587|ref|YP_002733820.1| hypothetical protein BMEA_A2222 [Brucella melitensis ATCC 23457]
 gi|254690293|ref|ZP_05153547.1| hypothetical protein Babob68_08992 [Brucella abortus bv. 6 str.
           870]
 gi|254694781|ref|ZP_05156609.1| hypothetical protein Babob3T_08988 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254700791|ref|ZP_05162619.1| hypothetical protein Bsuib55_08022 [Brucella suis bv. 5 str. 513]
 gi|254705160|ref|ZP_05166988.1| hypothetical protein Bsuib36_14811 [Brucella suis bv. 3 str. 686]
 gi|254709136|ref|ZP_05170947.1| hypothetical protein BpinB_02482 [Brucella pinnipedialis B2/94]
 gi|254713439|ref|ZP_05175250.1| hypothetical protein BcetM6_08809 [Brucella ceti M644/93/1]
 gi|254716205|ref|ZP_05178016.1| hypothetical protein BcetM_07186 [Brucella ceti M13/05/1]
 gi|256030661|ref|ZP_05444275.1| hypothetical protein BpinM2_08407 [Brucella pinnipedialis
           M292/94/1]
 gi|256045765|ref|ZP_05448643.1| hypothetical protein Bmelb1R_14765 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112484|ref|ZP_05453405.1| hypothetical protein Bmelb3E_07358 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256158663|ref|ZP_05456546.1| hypothetical protein BcetM4_07321 [Brucella ceti M490/95/1]
 gi|256254067|ref|ZP_05459603.1| hypothetical protein BcetB_07163 [Brucella ceti B1/94]
 gi|256258546|ref|ZP_05464082.1| hypothetical protein Babob9C_14597 [Brucella abortus bv. 9 str.
           C68]
 gi|256262929|ref|ZP_05465461.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|256370557|ref|YP_003108068.1| hypothetical protein BMI_I2183 [Brucella microti CCM 4915]
 gi|260563061|ref|ZP_05833547.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260567371|ref|ZP_05837841.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260755833|ref|ZP_05868181.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260884858|ref|ZP_05896472.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261215108|ref|ZP_05929389.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261217979|ref|ZP_05932260.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261221208|ref|ZP_05935489.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261316636|ref|ZP_05955833.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261321171|ref|ZP_05960368.1| hypothetical protein BAIG_01745 [Brucella ceti M644/93/1]
 gi|261751300|ref|ZP_05995009.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261755865|ref|ZP_05999574.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|265987708|ref|ZP_06100265.1| hypothetical protein BALG_00285 [Brucella pinnipedialis M292/94/1]
 gi|265992182|ref|ZP_06104739.1| hypothetical protein BAMG_02674 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993920|ref|ZP_06106477.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265997169|ref|ZP_06109726.1| hypothetical protein BAPG_00290 [Brucella ceti M490/95/1]
 gi|294851386|ref|ZP_06792059.1| hypothetical protein BAZG_00287 [Brucella sp. NVSL 07-0026]
 gi|297247385|ref|ZP_06931103.1| hypothetical protein BAYG_00286 [Brucella abortus bv. 5 str. B3196]
 gi|54040492|sp|P67213|RIMP_BRUSU RecName: Full=Ribosome maturation factor rimP
 gi|54042664|sp|P67212|RIMP_BRUME RecName: Full=Ribosome maturation factor rimP
 gi|166980272|sp|A5VTA9|RIMP_BRUO2 RecName: Full=Ribosome maturation factor rimP
 gi|189039426|sp|B0CK08|RIMP_BRUSI RecName: Full=Ribosome maturation factor rimP
 gi|189039778|sp|A9M9Z1|RIMP_BRUC2 RecName: Full=Ribosome maturation factor rimP
 gi|254801690|sp|C0RG44|RIMP_BRUMB RecName: Full=Ribosome maturation factor rimP
 gi|17984019|gb|AAL53149.1| protein associated with nus operon [Brucella melitensis bv. 1 str.
           16M]
 gi|23349050|gb|AAN31052.1| conserved hypothetical protein [Brucella suis 1330]
 gi|148371822|gb|ABQ61801.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
 gi|161336881|gb|ABX63186.1| hypothetical protein BCAN_A2204 [Brucella canis ATCC 23365]
 gi|163674898|gb|ABY39009.1| Hypothetical protein BSUIS_A1999 [Brucella suis ATCC 23445]
 gi|225641952|gb|ACO01866.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|256000720|gb|ACU49119.1| hypothetical protein BMI_I2183 [Brucella microti CCM 4915]
 gi|260153077|gb|EEW88169.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260156889|gb|EEW91969.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260675941|gb|EEX62762.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260874386|gb|EEX81455.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260916715|gb|EEX83576.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260919792|gb|EEX86445.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260923068|gb|EEX89636.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261293861|gb|EEX97357.1| hypothetical protein BAIG_01745 [Brucella ceti M644/93/1]
 gi|261295859|gb|EEX99355.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261741053|gb|EEY28979.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261745618|gb|EEY33544.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262551637|gb|EEZ07627.1| hypothetical protein BAPG_00290 [Brucella ceti M490/95/1]
 gi|262764901|gb|EEZ10822.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003248|gb|EEZ15541.1| hypothetical protein BAMG_02674 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263092803|gb|EEZ16978.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264659905|gb|EEZ30166.1| hypothetical protein BALG_00285 [Brucella pinnipedialis M292/94/1]
 gi|294819975|gb|EFG36974.1| hypothetical protein BAZG_00287 [Brucella sp. NVSL 07-0026]
 gi|297174554|gb|EFH33901.1| hypothetical protein BAYG_00286 [Brucella abortus bv. 5 str. B3196]
 gi|326410160|gb|ADZ67225.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326539878|gb|ADZ88093.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 219

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+L+R 
Sbjct: 128 SIVHEGRKKFRGRIVVGEADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|62290999|ref|YP_222792.1| hypothetical protein BruAb1_2135 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700908|ref|YP_415482.1| hypothetical protein BAB1_2162 [Brucella melitensis biovar Abortus
           2308]
 gi|189025211|ref|YP_001935979.1| hypothetical protein BAbS19_I20230 [Brucella abortus S19]
 gi|237816501|ref|ZP_04595494.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|254696409|ref|ZP_05158237.1| hypothetical protein Babob28_01503 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731322|ref|ZP_05189900.1| hypothetical protein Babob42_09020 [Brucella abortus bv. 4 str.
           292]
 gi|260546262|ref|ZP_05822002.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260759056|ref|ZP_05871404.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260760781|ref|ZP_05873124.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|75496020|sp|Q57AA3|RIMP_BRUAB RecName: Full=Ribosome maturation factor rimP
 gi|91208402|sp|Q2YQS0|RIMP_BRUA2 RecName: Full=Ribosome maturation factor rimP
 gi|259585733|sp|B2S9F3|RIMP_BRUA1 RecName: Full=Ribosome maturation factor rimP
 gi|62197131|gb|AAX75431.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82617009|emb|CAJ12118.1| Domain of unknown function DUF150 [Brucella melitensis biovar
           Abortus 2308]
 gi|189020783|gb|ACD73505.1| Domain of unknown function DUF150 [Brucella abortus S19]
 gi|237788568|gb|EEP62783.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260096369|gb|EEW80245.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260669374|gb|EEX56314.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260671213|gb|EEX58034.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 219

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+L+R 
Sbjct: 128 SIVHEGRKKFRGRIVVGEADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|260431716|ref|ZP_05785687.1| hypothetical protein SL1157_0822 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415544|gb|EEX08803.1| hypothetical protein SL1157_0822 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 196

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ +  V+I L+  K   LQI  ++ DG + + DC E+S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKQTTLQIMADKPDGGIEVDDCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKLETTELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +      E     + I + FD L  A+L++TD+L++  L        L
Sbjct: 125 LAGVEGDEVLINIPNGDET----VTIGLQFDWLSDAKLVLTDDLIKEMLRQRKDAGAL 178


>gi|110677787|ref|YP_680794.1| hypothetical protein RD1_0389 [Roseobacter denitrificans OCh 114]
 gi|123065971|sp|Q16D35|RIMP_ROSDO RecName: Full=Ribosome maturation factor rimP
 gi|109453903|gb|ABG30108.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 196

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K+ +LQI  +R DG + + DC E+SQ
Sbjct: 5   LIAKAAIDRRMAEIITPVIEDMGFELVRVRLMSGKSTILQIMADRPDGGIEVDDCAEISQ 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  AVSAVLDVEDPILDEYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETGDMVDGRRRFKGA 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E        E  I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGVEDDEVLINIE--------EGTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGAL 174


>gi|99082749|ref|YP_614903.1| hypothetical protein TM1040_2909 [Ruegeria sp. TM1040]
 gi|122397499|sp|Q1GCH5|RIMP_SILST RecName: Full=Ribosome maturation factor rimP
 gi|99039029|gb|ABF65641.1| protein of unknown function DUF150 [Ruegeria sp. TM1040]
          Length = 203

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ +  V+I L+  K   LQI  +R DG + + DC  +S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTLQIMADRPDGGIEVDDCAAISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETADLIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGIEDDEVLINIEEHGET----VTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGVL 178


>gi|149912924|ref|ZP_01901458.1| hypothetical protein RAZWK3B_03010 [Roseobacter sp. AzwK-3b]
 gi|149813330|gb|EDM73156.1| hypothetical protein RAZWK3B_03010 [Roseobacter sp. AzwK-3b]
          Length = 190

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K  LLQI  ER +G + + DC ++S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDMGFELVRVRLMGGKTHLLQIMAERPEGGIEVDDCAKISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  AVSAVLDVEDPVTDPYTLEVSSPGIDRPLTRLKDFADFEGYEAKIETSELIDGRKRFKGV 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E        E  + + FD L  A+L++TDEL++  L    +   L
Sbjct: 125 LAGVEDDEVLINIE--------EGTVGLKFDWLSDAKLVLTDELIKEMLKARKAAGTL 174


>gi|256060122|ref|ZP_05450304.1| hypothetical protein Bneo5_07156 [Brucella neotomae 5K33]
 gi|261324099|ref|ZP_05963296.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261300079|gb|EEY03576.1| conserved hypothetical protein [Brucella neotomae 5K33]
          Length = 219

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHITKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+L+R 
Sbjct: 128 SIVHEGRKKFRGRIVVGEADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|254475663|ref|ZP_05089049.1| hypothetical protein RR11_1501 [Ruegeria sp. R11]
 gi|214029906|gb|EEB70741.1| hypothetical protein RR11_1501 [Ruegeria sp. R11]
          Length = 196

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V+I L+  K   LQI  ++ DG + + DC E+S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGFELVRIRLMSGKTTTLQIMADKPDGGIEVDDCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDAYALEVSSPGIDRPLTRLKDFDMFEGYEAKIETTELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  E    +  E+ GE     + I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGVEEDEVLINIEEHGET----VTIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGTL 178


>gi|222147146|ref|YP_002548103.1| hypothetical protein Avi_0164 [Agrobacterium vitis S4]
 gi|259585691|sp|B9JYK3|RIMP_AGRVS RecName: Full=Ribosome maturation factor rimP
 gi|221734136|gb|ACM35099.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 204

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 80/184 (43%), Positives = 116/184 (63%), Gaps = 2/184 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M          EPR+  + GL   I+ +I+PVI E+ F  V++ +L +  + LQI  ER 
Sbjct: 1   MSEHVPADEAPEPRLITETGLDRRIADIIEPVIVELGFELVRVRILNQNGMTLQIMAERK 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCEELS AISP+LDVE+ ++  Y LEVSSPGIDRPMVR SDF RW G+++ CE
Sbjct: 61  DGTMTVEDCEELSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRASDFTRWQGNLLKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +   ++++  GKI   +  GF LE+++       E ++ I F +L  A+LI+TD+L+R
Sbjct: 121 TSILIDNRKRFRGKIADVTPDGFILERDQVAY--GEEPRLTIPFTALAEAKLILTDDLVR 178

Query: 181 ASLN 184
            +L 
Sbjct: 179 DALR 182


>gi|110636251|ref|YP_676459.1| hypothetical protein Meso_3927 [Mesorhizobium sp. BNC1]
 gi|123352956|sp|Q11BD1|RIMP_MESSB RecName: Full=Ribosome maturation factor rimP
 gi|110287235|gb|ABG65294.1| protein of unknown function DUF150 [Chelativorans sp. BNC1]
          Length = 220

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 66/177 (37%), Positives = 109/177 (61%), Gaps = 2/177 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            + RI  + G A  +++++ PV++ + +R V++ L  +  L LQI  ER DG MT+ DCE
Sbjct: 2   QDDRIIRETGAAARVAAIVMPVLDALGYRLVRVRLSAQDGLTLQIMAERPDGTMTVDDCE 61

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           E+S+A+SP LDVE+ I+  Y+LE+SSPGIDRP+VR SDF    GH+   E  +    +++
Sbjct: 62  EVSRAVSPALDVEDPIDSAYQLEISSPGIDRPLVRLSDFQAALGHLAKVETSVMVDGRKR 121

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
             G+I+G +     +E++K  E +    +  I  D++  A+L++TD L+R +L    
Sbjct: 122 FRGQIVGCTGETLTIERDKVAEGEAPLAE--IPLDAISDAKLVLTDALIREALKKDK 176


>gi|227824068|ref|YP_002828041.1| hypothetical protein NGR_c35650 [Sinorhizobium fredii NGR234]
 gi|254765072|sp|C3MC63|RIMP_RHISN RecName: Full=Ribosome maturation factor rimP
 gi|227343070|gb|ACP27288.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 205

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 82/181 (45%), Positives = 118/181 (65%), Gaps = 2/181 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M          EPR+  + GL   I+ +I+PV+ +M FR V++ +  +  L LQI  ER+
Sbjct: 1   MSDPTTAEIANEPRLITETGLDRRIADIIEPVLVQMGFRLVRVRMSGQNGLTLQIMTERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCE++S+A+SP+LDVE+ I+  Y LEVSSPGIDRPMVRKSDF+RW GH++ CE
Sbjct: 61  DGTMTVEDCEDVSKAVSPVLDVEDPIDKAYHLEVSSPGIDRPMVRKSDFVRWQGHLMKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +++  GKI+   E GF LE+++       E  +AI F +L  ARLI+TD+L+R
Sbjct: 121 TSIMVDGRKRFRGKIVSVDEEGFRLERDQPAY--GEEAVVAIPFTALSDARLILTDDLIR 178

Query: 181 A 181
            
Sbjct: 179 D 179


>gi|217978444|ref|YP_002362591.1| protein of unknown function DUF150 [Methylocella silvestris BL2]
 gi|259585790|sp|B8EIB0|RIMP_METSB RecName: Full=Ribosome maturation factor rimP
 gi|217503820|gb|ACK51229.1| protein of unknown function DUF150 [Methylocella silvestris BL2]
          Length = 279

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 63/171 (36%), Positives = 101/171 (59%), Gaps = 2/171 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  I+ +  PV+ ++ +R V++ L  +  + +QI  ER DG MT+ DCE
Sbjct: 16  AEPRLVAETGVAARIAHIATPVLADLGYRLVRVKLSAQDGMTVQIMAERPDGAMTVNDCE 75

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S A+SP LDVE++++  YRLE+SSPGIDRP+VR SDF R        E+ L    +++
Sbjct: 76  AVSAALSPALDVEDVVKQAYRLEISSPGIDRPLVRVSDFRRALDQEARIELRLGLDGRKR 135

Query: 131 LIGKIMGTSETG--FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
             G I G +  G    +  E+   K    ++  +  D L  A+L++T+EL+
Sbjct: 136 FRGLIKGVTGAGAAAVVTLERVDAKPGEAVEAVLPLDDLAEAKLVLTEELI 186


>gi|296448219|ref|ZP_06890115.1| protein of unknown function DUF150 [Methylosinus trichosporium
           OB3b]
 gi|296254259|gb|EFH01390.1| protein of unknown function DUF150 [Methylosinus trichosporium
           OB3b]
          Length = 251

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+ G+ G+A  I+ + +PV+ ++ +R V+  +L +  ++LQI  ER DG MT+ DCE
Sbjct: 15  DEPRLCGETGVAARIAHIAEPVLAQLGYRLVRARILSQNGVILQIMAERPDGTMTIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQ 129
             SQA+SP LDVE+ I   YRLE+SSPGIDRP+VR SDF R  G     E+ L     ++
Sbjct: 75  AASQALSPELDVEDAIADAYRLELSSPGIDRPLVRVSDFRRAIGQEAKIELTLPLASGRK 134

Query: 130 KLIGKIMGTSET--GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +  G I+             E++      E  + +    L  A+L++T+ L+R SL    
Sbjct: 135 RFRGDIIAVEGEGREAVATLERKDAPPDEEKTVRLPLRDLDEAKLMLTEALIRESLRAGK 194

Query: 188 SYA 190
           + A
Sbjct: 195 ADA 197


>gi|323136837|ref|ZP_08071918.1| protein of unknown function DUF150 [Methylocystis sp. ATCC 49242]
 gi|322398154|gb|EFY00675.1| protein of unknown function DUF150 [Methylocystis sp. ATCC 49242]
          Length = 255

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  ++ + +PV+ ++ FR V++ LL++    LQI  ER DG MT+ DCE
Sbjct: 14  DEPRLVSETGVAARVAHLAEPVLAQLGFRLVRVRLLQQNGQTLQIMAERPDGTMTIDDCE 73

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQ 129
             SQA+SP LDV ++I   YRLE+SSPG+DRP+VR SDF R  GH    E+       ++
Sbjct: 74  AASQALSPELDVADVIANEYRLEISSPGVDRPLVRVSDFARAVGHEARIELTHPVESGRK 133

Query: 130 KLIGKIMGTSETG--FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +  G I      G    L  E+   +   E  + +    L   +L++T+ L+R SL    
Sbjct: 134 RFRGVIQAVEGEGRNAKLTLERLDARSDEEKTVVLPLADLDEGKLMLTEALIRESLRAGK 193


>gi|225626527|ref|ZP_03784566.1| Protein of unknown function DUF150 [Brucella ceti str. Cudo]
 gi|260169565|ref|ZP_05756376.1| hypothetical protein BruF5_14639 [Brucella sp. F5/99]
 gi|261759093|ref|ZP_06002802.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|225618184|gb|EEH15227.1| Protein of unknown function DUF150 [Brucella ceti str. Cudo]
 gi|261739077|gb|EEY27073.1| conserved hypothetical protein [Brucella sp. F5/99]
          Length = 219

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 2/187 (1%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
             T    +  + RI  + G+   ++ +++PVI  + FR V++ L       LQI  ER D
Sbjct: 8   NETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPD 67

Query: 62  GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           G MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E 
Sbjct: 68  GTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVET 127

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            +    ++K  G+I+        +E ++      NE  + I FD +  ARL++TD+ +R 
Sbjct: 128 SIVHEGRKKFRGRIVVGEADSVTIESDQISY--GNEPVVRIPFDLISDARLVLTDDFIRD 185

Query: 182 SLNNYGS 188
           +L    +
Sbjct: 186 ALRKDKA 192


>gi|86136806|ref|ZP_01055384.1| hypothetical protein MED193_14067 [Roseobacter sp. MED193]
 gi|85826130|gb|EAQ46327.1| hypothetical protein MED193_14067 [Roseobacter sp. MED193]
          Length = 196

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ +  V+I L+  K   LQI  ++ +G + + DC  +S 
Sbjct: 5   LIAKAAIDRRLAEILIPVIEDLGYELVRIRLMSGKTTTLQIMADKPEGGIEVDDCAVVSS 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E     G +++  G+
Sbjct: 65  AVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDMFEGYEAKLETDELVGGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT E    +  E +G+     + I + FD L  A+L++TD+L+   L    +   L
Sbjct: 125 LAGTEEDEVLINIEDQGKT----VTIGLKFDWLSDAKLVLTDDLITEMLRQRKAAGTL 178


>gi|221640657|ref|YP_002526919.1| hypothetical protein RSKD131_2558 [Rhodobacter sphaeroides KD131]
 gi|254765045|sp|B9KPN3|RIMP_RHOSK RecName: Full=Ribosome maturation factor rimP
 gi|221161438|gb|ACM02418.1| Hypothetical Protein RSKD131_2558 [Rhodobacter sphaeroides KD131]
          Length = 204

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAALDVEDPIEENYTLEVSSPGIDRPLTRLKDFDVWTGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +  E         + I + FD L  A+LI+T+EL+   L    +  
Sbjct: 124 LAGTEGDEVLITIED---GRDGYVTIGLKFDWLADAKLILTEELIAEMLRQKKASG 176


>gi|159046100|ref|YP_001534894.1| hypothetical protein Dshi_3560 [Dinoroseobacter shibae DFL 12]
 gi|189040162|sp|A8LQ53|RIMP_DINSH RecName: Full=Ribosome maturation factor rimP
 gi|157913860|gb|ABV95293.1| protein of unknown function DUF150 [Dinoroseobacter shibae DFL 12]
          Length = 196

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     L   I++++ PVIE++ +  V++ ++  K+  LQI  E+ +G + + DC  +S 
Sbjct: 4   LIAKTTLDQRIAALVTPVIEDLGYELVRLRVMSGKSPTLQIMAEKPEGGIEVDDCARIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G 
Sbjct: 64  EVSATLDVEDPIEDNYTLEVSSPGIDRPLTRLKDFDTWVGYEAKIETTELIEGRRRFKGA 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +E E        E  I + F+ L  A+L++TD+L+R  L       
Sbjct: 124 LAGTEGDEVLIEIE--------EGTIGLKFEWLSDAKLVLTDDLIRDVLKGRKDAG 171


>gi|77464743|ref|YP_354247.1| hypothetical protein RSP_1162 [Rhodobacter sphaeroides 2.4.1]
 gi|91208409|sp|Q3IYN8|RIMP_RHOS4 RecName: Full=Ribosome maturation factor rimP
 gi|77389161|gb|ABA80346.1| hypothetical protein RSP_1162 [Rhodobacter sphaeroides 2.4.1]
          Length = 204

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 3/176 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAALDVEDPIEENYTLEVSSPGIDRPLTRLKDFEVWTGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +  E       + + I + FD L  A+LI+T+EL+   L    +  
Sbjct: 124 LAGTEGDEVLITIED---GRDSYVTIGLKFDWLADAKLILTEELIAEMLRQKKASG 176


>gi|146278787|ref|YP_001168946.1| hypothetical protein Rsph17025_2754 [Rhodobacter sphaeroides ATCC
           17025]
 gi|166988606|sp|A4WW77|RIMP_RHOS5 RecName: Full=Ribosome maturation factor rimP
 gi|145557028|gb|ABP71641.1| protein of unknown function DUF150 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 204

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 3/176 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C ++S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECADIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAVLDVEDPIEDNYTLEVSSPGIDRPLTRLKDFDAWAGYEARIETAELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +  E   E  +    I + FD L  A+LI+TDEL+   L    +  
Sbjct: 124 LAGTEGDEVLITIEDGKEGFV---TIGLKFDWLSDAKLILTDELIAEMLRQKKASG 176


>gi|209551641|ref|YP_002283558.1| hypothetical protein Rleg2_4070 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226706118|sp|B5ZW32|RIMP_RHILW RecName: Full=Ribosome maturation factor rimP
 gi|209537397|gb|ACI57332.1| protein of unknown function DUF150 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 201

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/187 (41%), Positives = 122/187 (65%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M       ++ EPR+  + GL   ++ +I+PV+  + FR +++ +L +  + +Q+  ER+
Sbjct: 1   MSDMTNAGNELEPRLITETGLDQRLADIIEPVLIGIGFRLIRVRMLNQNGVTMQVMAERN 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT++DCEE+S AISP+LDVE+ ++  Y LEVSSPGIDRPMVRKSDF+RW GH+V CE
Sbjct: 61  DGTMTVQDCEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +   ++++  GKI+     GF LE+++       E ++ I F +L  A+LI+TD+L+R
Sbjct: 121 TSILIDNRKRFRGKIVEAGVDGFTLERDQVAY--GEEQKVTIPFTALSDAKLILTDDLIR 178

Query: 181 ASLNNYG 187
            +L    
Sbjct: 179 DALRADK 185


>gi|126463583|ref|YP_001044697.1| hypothetical protein Rsph17029_2823 [Rhodobacter sphaeroides ATCC
           17029]
 gi|166988525|sp|A3PNK9|RIMP_RHOS1 RecName: Full=Ribosome maturation factor rimP
 gi|126105247|gb|ABN77925.1| protein of unknown function DUF150 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 204

 Score =  166 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 3/176 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAALDVEDPIEENYTLEVSSPGIDRPLTRLKDFDVWTGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +  E       + + I + FD L  A+LI+T+EL+   L    +  
Sbjct: 124 LAGTEGDEVLITIED---GRDSYVTIGLKFDWLADAKLILTEELIAEMLRQKKASG 176


>gi|240849884|ref|YP_002971272.1| hypothetical protein Bgr_02280 [Bartonella grahamii as4aup]
 gi|240267007|gb|ACS50595.1| hypothetical protein Bgr_02280 [Bartonella grahamii as4aup]
          Length = 216

 Score =  166 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 117/187 (62%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M     + +  EPR+F + G+   +++++ P+++ + FR V++ LL +  L LQI VER 
Sbjct: 9   MNEAEKISNLDEPRLFEEDGIEAQVAALVIPLLKPLGFRLVRVKLLGQNGLTLQIMVERA 68

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG+MT+ DCE +S+ +SP+LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 69  DGSMTVEDCETVSRTVSPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGHLAKIE 128

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             ++   ++K  G +   ++ GF L  +K    +       ISF  +++A L++TDEL+R
Sbjct: 129 TKITIDGRRKFRGTLTNITQDGFILNTDKAAYGEAMYTP--ISFCDIINAHLVLTDELIR 186

Query: 181 ASLNNYG 187
            +L    
Sbjct: 187 DALKKNK 193


>gi|332559636|ref|ZP_08413958.1| ribosome maturation protein RimP [Rhodobacter sphaeroides WS8N]
 gi|332277348|gb|EGJ22663.1| ribosome maturation protein RimP [Rhodobacter sphaeroides WS8N]
          Length = 204

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 3/176 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE M F  V++ L+  K   LQI  +R DG + + +C E+S 
Sbjct: 4   LVAKTAIDRRLADIVTPVIEGMGFELVRLRLMSGKTRTLQIMADRPDGGIVVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ IE +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAALDVEDPIEENYTLEVSSPGIDRPLTRLKDFDVWTGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +  E       + + I + FD L  A+LI+T+EL+   L    +  
Sbjct: 124 LAGTEGDEVLITIED---GRDSYVTIGLKFDWLSDAKLILTEELIAEMLRQKKASG 176


>gi|163737948|ref|ZP_02145364.1| hypothetical protein RGBS107_06039 [Phaeobacter gallaeciensis
           BS107]
 gi|161388564|gb|EDQ12917.1| hypothetical protein RGBS107_06039 [Phaeobacter gallaeciensis
           BS107]
          Length = 196

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V+I L+  K   LQI  ++ DG + +  C E+S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGFELVRIRLMSGKTTTLQIMADKPDGGIEVDGCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDSYALEVSSPGIDRPLTRLKDFEMFEGYEAKIETSELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E+ GE       I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGVEGDEVLINIEEHGETI----TIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGTL 178


>gi|294675769|ref|YP_003576384.1| hypothetical protein RCAP_rcc00212 [Rhodobacter capsulatus SB 1003]
 gi|294474589|gb|ADE83977.1| protein of unknown function DUF150 [Rhodobacter capsulatus SB 1003]
          Length = 199

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +    G+   ++ +I P IE + F  V+I +   ++ LLQI  +R +G + + DC  +S 
Sbjct: 4   LIAKTGIDRRLADIIGPTIEGLGFELVRIRMQGGRHPLLQIMADRPEGGIDVDDCGAIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ IE  Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G 
Sbjct: 64  AVSAVLDVEDPIEEKYTLEVSSPGIDRPLTRLKDFDVWEGYEARIETEEQIDGRKRFKGI 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT +    +E E +G     ++ I + FD L  A+LI+TDEL+   L    +  
Sbjct: 124 LRGTEDDEVLIEIENQG----EQVTIGLKFDWLSDAKLILTDELIAEMLRQRKAAG 175


>gi|163867514|ref|YP_001608713.1| hypothetical protein Btr_0242 [Bartonella tribocorum CIP 105476]
 gi|259585727|sp|A9IMU4|RIMP_BART1 RecName: Full=Ribosome maturation factor rimP
 gi|161017160|emb|CAK00718.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 208

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/188 (38%), Positives = 117/188 (62%), Gaps = 2/188 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M     + +  EPR+F + G+   +++++ P+++ + FR V++ LL +  L LQI VER 
Sbjct: 1   MNEAEKISNLDEPRLFEEDGIEARVAALVIPLLKPLGFRLVRVKLLGQNGLTLQIMVERA 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG++T+ DCE +S+ +SP+LDVEN+IE  Y LE+SSPGIDRP+VRKSDF  W GH+   E
Sbjct: 61  DGSLTVEDCETVSRTVSPLLDVENVIERKYHLEISSPGIDRPLVRKSDFFHWQGHLAKIE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             ++   ++K  G +   ++ GF L  +K    +      +ISF  ++ A L++TDEL+R
Sbjct: 121 TKITIDGRRKFRGTLTNITQDGFILNADKAAYGEAMYT--SISFCDIIGAHLVLTDELIR 178

Query: 181 ASLNNYGS 188
            +L     
Sbjct: 179 DALKKNKD 186


>gi|163742657|ref|ZP_02150043.1| hypothetical protein RG210_07209 [Phaeobacter gallaeciensis 2.10]
 gi|161384242|gb|EDQ08625.1| hypothetical protein RG210_07209 [Phaeobacter gallaeciensis 2.10]
          Length = 196

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V+I L+  K   LQI  ++ DG + +  C E+S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGFELVRIRLMSGKTTTLQIMADKPDGGIEVDGCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AVSATLDVEDPILDSYALEVSSPGIDRPLTRLKDFEMFEGYEAKIETSELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E+ GE       I + FD L  A+L++TD+L++  L    +   L
Sbjct: 125 LAGVEDDEVLINIEEHGETI----TIGLKFDWLSDAKLVLTDDLIKEMLRQRKAAGTL 178


>gi|149202948|ref|ZP_01879919.1| hypothetical protein RTM1035_19436 [Roseovarius sp. TM1035]
 gi|149143494|gb|EDM31530.1| hypothetical protein RTM1035_19436 [Roseovarius sp. TM1035]
          Length = 191

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ +  V++ L+  +   LQI  ++ +G + + DC  +S 
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDLGYELVRVRLMGGQYHTLQIMADKPEGGIEVDDCAAIST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  AVSAVLDVEDPLVEAYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETTELIDGRRRFKGV 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G   +   +  E        E  I + FD L  A+L++TDEL++  L    +  
Sbjct: 125 LAGVEGSEVLINVE--------EGTIGLEFDWLSDAKLVLTDELIKEMLRQRKAAG 172


>gi|154254056|ref|YP_001414880.1| hypothetical protein Plav_3625 [Parvibaculum lavamentivorans DS-1]
 gi|259586173|sp|A7HZ90|RIMP_PARL1 RecName: Full=Ribosome maturation factor rimP
 gi|154158006|gb|ABS65223.1| protein of unknown function DUF150 [Parvibaculum lavamentivorans
           DS-1]
          Length = 207

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 2/177 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           +  +    G+A  +   ++   E   F  V++    +    LQI  ER DG+MT+ DC E
Sbjct: 21  DTHLIAPPGVARRVFEQLRAPAEGAGFEIVRVRFGVQDGQTLQIMAERPDGSMTVEDCAE 80

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           LS+ +S +LDVE+ I G Y LE+SS GIDRP+ R  DF RW+G  V   +      +++ 
Sbjct: 81  LSRMLSALLDVEDPIPGEYHLEISSAGIDRPLTRPKDFERWSGFEVKVGLSEPLSGRKRF 140

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
            G + G  +    +E +  G        + + F  L  A+L+++D+L+R SL   G 
Sbjct: 141 RGILQGVEDDEVLVECDIEGF--SEPQVLGLPFRQLSEAKLVMSDDLIRESLKRQGP 195


>gi|85705697|ref|ZP_01036794.1| hypothetical protein ROS217_10367 [Roseovarius sp. 217]
 gi|85669687|gb|EAQ24551.1| hypothetical protein ROS217_10367 [Roseovarius sp. 217]
          Length = 191

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ +  V++ L+  +   LQI  ++ DG + + DC  +S 
Sbjct: 5   LIAKAAIDRRMAEIITPVIEDLGYELVRVRLMGGQYHTLQIMADKPDGGIEVDDCAVIST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  AVSAVLDVEDPLVEAYTLEVSSPGIDRPLTRLKDFEAFEGYEAKIETTELIDGRRRFKGV 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G   T   +  E        E  I + FD L  A+L++TDEL++  L    +  
Sbjct: 125 LAGVEGTEVLINVE--------EGTIGLEFDWLSDAKLVLTDELIKEMLRQRKAAG 172


>gi|90420534|ref|ZP_01228441.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335262|gb|EAS49015.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 232

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/171 (38%), Positives = 105/171 (61%), Gaps = 2/171 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           +    RI  + GL G ++ +++P IE++ +R V++       + LQI  ER DG MT+ D
Sbjct: 32  TTATDRIVKEQGLEGRVAEIVEPAIEQIGYRLVRVRTSGLNGMTLQIMAERPDGTMTVED 91

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP+LDV++ I+  Y LEVSSPGIDRP+VRK DF  W G ++  E      ++
Sbjct: 92  CEAVSRAVSPVLDVDDPIDKAYHLEVSSPGIDRPLVRKGDFETWAGFLMKLETNRLINER 151

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           ++  GKI+   +    +E+++  E       + I FD++  ARLI+TD+L+
Sbjct: 152 KRYRGKIVAVGDEAITVERDQPAE--GEPGAVEIPFDAIGEARLILTDDLI 200


>gi|114762089|ref|ZP_01441557.1| hypothetical protein 1100011001331_R2601_14160 [Pelagibaca
           bermudensis HTCC2601]
 gi|114545113|gb|EAU48116.1| hypothetical protein R2601_14160 [Roseovarius sp. HTCC2601]
          Length = 195

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ F  V++ L+  K   LQI  ER +G + + +C ++S 
Sbjct: 4   LIAKSAIDRRLAEIVTPVIEDLGFELVRLRLMSGKTATLQIMAERPEGGIEVDECADIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 64  AVSAVLDVEDPIIDAYALEVSSPGIDRPLTRLKDFDTYEGYEAKIETQEMIDGRKRWRGV 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G   +      E  G     E  I + FD L  A+LI+TD+L+R  L    +  
Sbjct: 124 LAGIEGSEVLFNIEGEG---GEEQTIGLQFDWLSDAKLILTDDLIRDMLRARKAQE 176


>gi|89052532|ref|YP_507983.1| hypothetical protein Jann_0041 [Jannaschia sp. CCS1]
 gi|122499897|sp|Q28WF4|RIMP_JANSC RecName: Full=Ribosome maturation factor rimP
 gi|88862081|gb|ABD52958.1| protein of unknown function DUF150 [Jannaschia sp. CCS1]
          Length = 194

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ P IE + F  V+I ++  K   LQI  ER DG + + +C ++S 
Sbjct: 4   LIAKTSMDRRMAEIVTPSIEALGFEVVRIRVMGGKTNTLQIMAERPDGGIDVDECAQISN 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS +LDVE+ +E  Y LEVSSPGIDRP+ R  DF  + G+    E     G +++  G 
Sbjct: 64  AISVLLDVEDPLEDAYALEVSSPGIDRPLTRLKDFETFEGYEAKLETTEMIGGQRRFKGV 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G  +    +  E+        + + ++FD L  A+L++TDEL++  L       
Sbjct: 124 LAGVEDDEVLVNLEQ----GSETVTVGLNFDWLSDAKLVLTDELIKEMLKQRKDAG 175


>gi|319408014|emb|CBI81668.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 211

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 72/187 (38%), Positives = 116/187 (62%), Gaps = 2/187 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           +  T  +++  EPR+F + G+ G +++++ P+++ +S+R +++       L LQI  ER 
Sbjct: 4   INETETINNIDEPRLFKEDGIEGRVAALVSPLLKPLSYRLIRVKFSGLNGLTLQIMAERT 63

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCE +S+ +SP LDV+NIIE  Y LE+SSPGIDRP+VRKSDF +W GHV   E
Sbjct: 64  DGTMTIEDCEIISRTVSPFLDVQNIIERKYHLEISSPGIDRPLVRKSDFFKWQGHVAKIE 123

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
             +    +QK  G +   ++  F L  +K    ++ +  + I F  + +ARL++TDEL+R
Sbjct: 124 TGVVINGRQKFRGTLTNITQNSFTLNTDKASHGEIAD--VLIPFADVTNARLVLTDELIR 181

Query: 181 ASLNNYG 187
            +L    
Sbjct: 182 DALKKDK 188


>gi|161170253|gb|ABX59223.1| uncharacterized protein conserved in bacteria [uncultured marine
           bacterium EB000_55B11]
 gi|297183782|gb|ADI19905.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
          Length = 222

 Score =  164 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMT 65
           F + +    +     +   ++S++QPVIE++ +  V+I L+  K   LQI  ++ +G + 
Sbjct: 34  FFYVRKMSDLIAKSAIDKRMASIVQPVIEDLGYELVRIRLMSGKATTLQIMADKPNGGID 93

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           + DC ++S  IS ILDVE+ IE  Y LEVSSPG+DRP+ R  DF  WNG  +  E     
Sbjct: 94  VNDCSKISTEISAILDVEDPIEAEYALEVSSPGMDRPLTRLKDFQTWNGFEIKVETSELI 153

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
             +++  G   G  +    +E  +          I + F+ L  A+L++TDEL+ AS   
Sbjct: 154 DGQRRFKGLSRGIEDNDVLIEIPQ--------GTIGLDFEWLSDAKLVLTDELVAASQKG 205

Query: 186 Y 186
            
Sbjct: 206 R 206


>gi|329113269|ref|ZP_08242052.1| Ribosome maturation factor RimP [Acetobacter pomorum DM001]
 gi|326697410|gb|EGE49068.1| Ribosome maturation factor RimP [Acetobacter pomorum DM001]
          Length = 201

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELS 73
           +    GL   ++++I P +E+M +  V++++L  +   +QI  +R DG+ + + DCE +S
Sbjct: 14  LSTHSGLEARVAALIAPAVEDMGYEIVRVAVLGRERPTVQIMADRKDGSLINVEDCERIS 73

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            A+  +LDVE+ I G + LEVSS GIDRP+ R  D+ R+ GH    E++L    +++  G
Sbjct: 74  HAVGAVLDVEDPIPGAWTLEVSSAGIDRPLTRAKDWNRFAGHQAKAEVLLPVNGRRRFSG 133

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            ++G+  T   +  +          ++A+  + L  ARL++TD L+ AS        G
Sbjct: 134 VVLGSDGTVARMRLDD-------GTEVALPLEELRRARLVLTDALIEASARMVQPAPG 184


>gi|260429224|ref|ZP_05783201.1| hypothetical protein CSE45_3569 [Citreicella sp. SE45]
 gi|260419847|gb|EEX13100.1| hypothetical protein CSE45_3569 [Citreicella sp. SE45]
          Length = 198

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE+M F  V+I L+  K   LQI  ER +G + + +C ++S 
Sbjct: 4   LIAKSAIDRRLAEIVAPVIEDMGFELVRIRLMGGKTATLQIMAERPEGGIEIDECGDIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEV SPGIDRP+ R  DF  + G+    +       +++  G 
Sbjct: 64  AVSAVLDVEDPILDSYVLEVGSPGIDRPLTRLKDFETFEGYDAKIQTDELIDGRKRWQGV 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G       L  E+ GE       I + FD L  A+LI+TDEL+R  L    +  
Sbjct: 124 LAGVEGGEVLLNIEENGET----QTIGLQFDWLSDAKLILTDELMREMLRARKARG 175


>gi|126724628|ref|ZP_01740471.1| hypothetical protein RB2150_12371 [Rhodobacterales bacterium
           HTCC2150]
 gi|126705792|gb|EBA04882.1| hypothetical protein RB2150_12371 [Rhodobacterales bacterium
           HTCC2150]
          Length = 228

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   +++++ PVIE++    V++ L+  K  +LQI VE+ +G + + DC ++S 
Sbjct: 42  LIAKAAIDQRMANIVTPVIEDLGCELVRVRLMTGKENILQIMVEKPEGGIEVDDCAKVST 101

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  W+G+    E       +++  G+
Sbjct: 102 AVSATLDVEDPILDAYNLEVSSPGIDRPLTRLKDFDMWDGYEAKIETSELIDGRRRFKGQ 161

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT +    +  E        E  I + F+ L  A+L++TDEL+R  L +     
Sbjct: 162 LAGTQDDEVLITIE--------EGTIGLKFEWLSDAKLVLTDELIRDVLRSRKDAG 209


>gi|126738453|ref|ZP_01754158.1| hypothetical protein RSK20926_08312 [Roseobacter sp. SK209-2-6]
 gi|126720252|gb|EBA16958.1| hypothetical protein RSK20926_08312 [Roseobacter sp. SK209-2-6]
          Length = 197

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 4/178 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ F  V+I L+  K   LQI  ++ +G + + DC E+S 
Sbjct: 5   LIAKAAIDRRLAEILIPVIEDLGFELVRIRLMSGKTTTLQIMADKPEGGIEVDDCAEISN 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E     G +++  G+
Sbjct: 65  AVSATLDVEDPILDAYSLEVSSPGIDRPLTRMKDFDMFEGYEAKLETEELVGGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + GT E    +  E +GE     + I + FD L  A+L++TDEL++  L    +   L
Sbjct: 125 LAGTEEDEVLINIEDQGET----VTIGLKFDWLTDAKLVLTDELIKEMLRQRKAAGTL 178


>gi|121601902|ref|YP_989500.1| hypothetical protein BARBAKC583_1251 [Bartonella bacilliformis
           KC583]
 gi|259585726|sp|A1UU47|RIMP_BARBK RecName: Full=Ribosome maturation factor rimP
 gi|120614079|gb|ABM44680.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
          Length = 209

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 4/187 (2%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           + +T  +    EPR+F + G+   + +++ P+++ + +R V++ LL    L LQI  ER 
Sbjct: 4   INATEIMDDIDEPRLFEEDGVEALVVALVAPLLKPLGYRLVRVKLLGLNGLTLQIMAERA 63

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           DG MT+ DCE +S+ ISP+LDV+N+IE  Y LE+SSPGIDRP+VRKSDF  W G+    E
Sbjct: 64  DGTMTIEDCEIISKTISPLLDVQNVIERKYHLEISSPGIDRPLVRKSDFFHWQGYTAKIE 123

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  ++K  G +   ++ GF L  +        E  + +SF ++ +A L++TD+L+R
Sbjct: 124 TRTIVNGRRKFRGALENVTQDGFILNID----AAPEEETVYVSFSNITNAHLVLTDKLIR 179

Query: 181 ASLNNYG 187
            +L    
Sbjct: 180 DALKKDK 186


>gi|84500728|ref|ZP_00998977.1| hypothetical protein OB2597_12236 [Oceanicola batsensis HTCC2597]
 gi|84391681|gb|EAQ04013.1| hypothetical protein OB2597_12236 [Oceanicola batsensis HTCC2597]
          Length = 189

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE+M F  V++ L+  +   LQI  ER  G + + +C E+S 
Sbjct: 3   LIAKTAIDRRLAEIVTPVIEDMGFELVRLRLMGGQTKTLQIMAERPGGGIEVDECAEISN 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LDVE+ +   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 63  AVSATLDVEDPVSDAYTLEVSSPGIDRPLTRLKDFDTFQGYEAKIETTELIDGRKRFKGV 122

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E        E  + + FD L  A+L++TDEL++  L        L
Sbjct: 123 LAGVEGGEILINIE--------EGTVGLHFDWLADAKLVLTDELIKEMLKARKDAGQL 172


>gi|163745073|ref|ZP_02152433.1| hypothetical protein OIHEL45_05780 [Oceanibulbus indolifex HEL-45]
 gi|161381891|gb|EDQ06300.1| hypothetical protein OIHEL45_05780 [Oceanibulbus indolifex HEL-45]
          Length = 192

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K+ +LQ+  +R DG + + +C ++SQ
Sbjct: 5   LIAKAAIDRRLAEIITPVIEDMGFELVRVRLMSGKSTILQVMADRPDGGIEVDECAKISQ 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AI  +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AIGAVLDVEDPILDEYALEVSSPGIDRPLTRLKDFDAFEGYEAKIETTELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E        E  I + FD L  A+L++TD+L++  L    +   +
Sbjct: 125 LAGVEGGEVLINVE--------EGTIGLQFDWLSDAKLLLTDDLIKEMLRQRKASGAI 174


>gi|258543557|ref|YP_003188990.1| hypothetical protein APA01_25050 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634635|dbj|BAI00611.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256637691|dbj|BAI03660.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256640745|dbj|BAI06707.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256643800|dbj|BAI09755.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256646855|dbj|BAI12803.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256649908|dbj|BAI15849.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256652898|dbj|BAI18832.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655952|dbj|BAI21879.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 201

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 100/178 (56%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELS 73
           +    GL   ++++I P +E+M +  V++++L  +   +QI  +R DG+ + + DCE +S
Sbjct: 14  LSTHSGLEARVAALIAPAVEDMGYEIVRVAVLGRERPTVQIMADRKDGSLINVEDCERIS 73

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            A+  +LDVE+ I G + LEVSS GIDRP+ R  D+ R+ GH V  E++L    +++  G
Sbjct: 74  HAVGAVLDVEDPIPGAWTLEVSSAGIDRPLTRAKDWNRFAGHQVKAEVLLPVNGRRRFSG 133

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            ++G+  T   +  +          ++A+  + L  ARL++TD L+ AS     S  G
Sbjct: 134 TVLGSDGTVARMRLDD-------GTEVALPLEELRRARLVLTDALIEASARMVQSAPG 184


>gi|254471146|ref|ZP_05084549.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
 gi|211960288|gb|EEA95485.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
          Length = 196

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 67/171 (39%), Positives = 99/171 (57%), Gaps = 2/171 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
            + +PRI  + GL   ++ +++PVI ++ +R V+I +       LQI  ER DG M + D
Sbjct: 2   DETDPRIVKEKGLEARVAEIVEPVIVDLGYRLVRIRVNGNNGCTLQIMAERPDGTMAVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S A+SP LDV++ I G Y LE+SSPGIDRP+VR  DF RW GHVV  E+ +    +
Sbjct: 62  CEEISHAVSPALDVDDPISGAYHLEISSPGIDRPLVRAGDFERWVGHVVKIEMSVPQAGR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           ++  G I+G  E    +      E         +  D + SA L++TDEL+
Sbjct: 122 KRYRGHIIGVEEGNAVIRMTDVQEGQDEAA--HLPLDEIGSAVLVLTDELI 170


>gi|319405102|emb|CBI78706.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 207

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 2/190 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M +   +    EPR+F + G+A  +S++I P+++ + F  +   LL    L LQI VER 
Sbjct: 18  MNAIERMDDINEPRLFEEDGVAARVSALIIPLLKPLGFHLICTKLLSLNGLTLQIMVERT 77

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G MT++DCE +S+ ++P+LD+ENIIE  Y LEVSSPGIDRP+VRKSDF  W GH+   E
Sbjct: 78  NGTMTIKDCEIVSRTVAPLLDIENIIERKYHLEVSSPGIDRPLVRKSDFFHWQGHLAKIE 137

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  +QK  GK+   +++GF L  EK    D  E  I I F ++ +ARLI+TDEL+R
Sbjct: 138 TSTIIDGRQKFRGKLTDITQSGFTLNIEKTA--DREEANIFIPFSNITNARLILTDELIR 195

Query: 181 ASLNNYGSYA 190
            +L      A
Sbjct: 196 DTLKKNKDCA 205


>gi|307942743|ref|ZP_07658088.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
 gi|307773539|gb|EFO32755.1| conserved hypothetical protein [Roseibium sp. TrichSKD4]
          Length = 200

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/171 (36%), Positives = 107/171 (62%), Gaps = 2/171 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S++E RI  + GL   ++++++PVIE++ FR V+  +       LQI  ER DG MT+ D
Sbjct: 2   SEHEARIVTEQGLDARVAAIVEPVIEDLGFRLVRSKISAANGCTLQIMAERPDGTMTVED 61

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+A+SP LDV++ I   Y LEVSSPGIDRP+VR+SDF+RW+GH V  E+ +    +
Sbjct: 62  CETVSRAVSPALDVDDPISRAYHLEVSSPGIDRPLVRESDFVRWSGHEVKIEMSVLQEGR 121

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
           ++  G ++G       ++       +++   +++    +  A+L++TD+L+
Sbjct: 122 KRFRGTLLGAENGETQIKLPDTKSGEVDA--VSLPIGDIGEAKLVLTDDLI 170


>gi|254462851|ref|ZP_05076267.1| hypothetical protein RB2083_3442 [Rhodobacterales bacterium
           HTCC2083]
 gi|206679440|gb|EDZ43927.1| hypothetical protein RB2083_3442 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 193

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE++ F  V++ L+  K   LQI  ER  G + +  C E+S 
Sbjct: 5   LIAKAAIDQRLAGIITPVIEDLGFELVRVRLMSGKTTTLQIMAERPTGGIEVDQCAEIST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AI   LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  AIGATLDVEDPIIDEYTLEVSSPGIDRPLTRLKDFATFEGYEAKIETTELIDGRRRFKGQ 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G       +  E        E  + ++FD L  A+L++TDEL+   L    +  
Sbjct: 125 LAGVEGNDVLINIE--------EGTVGLNFDWLSDAKLVLTDELITEMLRQRKAAG 172


>gi|319898340|ref|YP_004158433.1| hypothetical protein BARCL_0162 [Bartonella clarridgeiae 73]
 gi|319402304|emb|CBI75843.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 207

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 75/177 (42%), Positives = 114/177 (64%), Gaps = 2/177 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
              EPR+F + G+A  ++++I P+++ + FR V+I LL    L LQI  ER +G MT+ D
Sbjct: 29  DIDEPRLFEEDGIAARVAALIAPLLKPLGFRLVRIKLLGLNGLTLQIMAERANGTMTIED 88

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CE +S+ ++P+LD+ENIIE  Y LE+SSPGIDRP+VRKSDF  W GH+   E   +   +
Sbjct: 89  CETVSRTVAPLLDIENIIERKYHLEISSPGIDRPLVRKSDFFHWQGHLAKIETSTAINGR 148

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           QK  GK++  ++ GF L  +K  + +       ISF ++ +A L++TDEL+R +L  
Sbjct: 149 QKFRGKLINVAQNGFTLNIDKTADGEEMHE--FISFSNITNAHLVLTDELIRDTLKK 203


>gi|319406548|emb|CBI80190.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 225

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 83/190 (43%), Positives = 119/190 (62%), Gaps = 2/190 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M     +    EPR+F + G+A  +S++I P+++ + FR V+  LL    L LQI VER 
Sbjct: 18  MNEIERMDDIDEPRLFEEDGVAARVSALIIPLLKPLGFRLVRTKLLGLNGLTLQIMVERT 77

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G MT+ DCE +S+A++P+LDVENIIE  Y LEVSSPGIDRP+VRKSDF+ W GH+   E
Sbjct: 78  NGTMTIEDCEIVSRAVAPLLDVENIIERKYHLEVSSPGIDRPLVRKSDFIHWQGHLAKIE 137

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  +QKL GK+   ++ GF L  EK   +   ++ + ISF ++ +A LI+TDEL+R
Sbjct: 138 TSTIIDGRQKLRGKLKDITQNGFTLNIEKTAHR--EKVNVFISFSNITNAHLILTDELIR 195

Query: 181 ASLNNYGSYA 190
            +L       
Sbjct: 196 DTLKKNKDLD 205


>gi|304392763|ref|ZP_07374703.1| conserved hypothetical protein [Ahrensia sp. R2A130]
 gi|303295393|gb|EFL89753.1| conserved hypothetical protein [Ahrensia sp. R2A130]
          Length = 213

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 63/181 (34%), Positives = 107/181 (59%), Gaps = 2/181 (1%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
           + + + R+  + GL   ++SVI PVIE++ +R V++ +++   L +QIF ER DG M++ 
Sbjct: 20  NDRADARLVKEEGLDAKVASVIAPVIEDLGYRLVRVRMVDHNGLTMQIFAERPDGTMSVG 79

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           +CE +S+A+SP+LDVE+ +   Y LEV SPGIDRP+VR+SDF  W GH    E       
Sbjct: 80  ECEIISKALSPVLDVEDPVTQAYNLEVGSPGIDRPLVRRSDFETWTGHTAKIETAYLVDG 139

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  GK++        L ++     +  +  +     ++ SA L++TD+L+R +L    
Sbjct: 140 RKRFRGKLVAVDGEIVKLRRDNAASGEDKDADV--PLHAIASASLVLTDDLIREALKRDK 197

Query: 188 S 188
           S
Sbjct: 198 S 198


>gi|254707322|ref|ZP_05169150.1| hypothetical protein BpinM_10195 [Brucella pinnipedialis
           M163/99/10]
 gi|261314804|ref|ZP_05954001.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261303830|gb|EEY07327.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
          Length = 192

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 2/166 (1%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
               ++++PVI  + FR V++ L       LQI  ER DG MT+ DCE +S+ ++P+LDV
Sbjct: 2   RKWQALLEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVSRTVAPVLDV 61

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G Y LE+SSPGIDRP+VRKSDF  W GH+   E  +    ++K  G+I+      
Sbjct: 62  EDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVETSIVHEGRKKFRGRIVVGEADS 121

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
             +E ++      NE  + I FD +  ARL++TD+L+R +L    +
Sbjct: 122 VTIESDQISY--GNEPVVRIPFDLISDARLVLTDDLIRDALRKDKA 165


>gi|330991198|ref|ZP_08315150.1| Ribosome maturation factor rimP [Gluconacetobacter sp. SXCC-1]
 gi|329761691|gb|EGG78183.1| Ribosome maturation factor rimP [Gluconacetobacter sp. SXCC-1]
          Length = 227

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 11/190 (5%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD 61
            +  F      P +    GL   I++++ P + +M F  V++++L  ++  +QI  +R D
Sbjct: 6   RAAFFALDADLPFL---TGLDARIAAMVAPALADMGFDLVRVAVLGRESPTVQIMADRAD 62

Query: 62  GN-MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           G  + + DCE++S A+  ILDVE+ + G + LEVSS GIDRP+ R  D+ R+ GH+   E
Sbjct: 63  GTLIAIEDCEQISHAVGAILDVEDPLPGAWTLEVSSAGIDRPLTRAKDWERFAGHLARAE 122

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           + +    +++  G ++G  +    +  +          ++A+ F  +  ARL++TDEL+ 
Sbjct: 123 MNMPIEGRKRFAGIVLGARDGHGLMRLDD-------GTEVALPFAEMRKARLVLTDELIE 175

Query: 181 ASLNNYGSYA 190
           AS       A
Sbjct: 176 ASARMMRPAA 185


>gi|83950735|ref|ZP_00959468.1| hypothetical protein ISM_06535 [Roseovarius nubinhibens ISM]
 gi|83838634|gb|EAP77930.1| hypothetical protein ISM_06535 [Roseovarius nubinhibens ISM]
          Length = 190

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ PVIE++ F  V++ L+  K   LQI  ER +G + + +C  +S 
Sbjct: 5   LIAKAAIDRRLAEIVTPVIEDLGFELVRLRLMGGKTDTLQIMAERPEGGIEVDECARIST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 65  EVSAVLDVEDPIIEAYTLEVSSPGIDRPLTRLKDFETFEGYEAKIETSELIDGRKRFKGV 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G       +  E        E  I + FD L  A+L++TDEL++  L        L
Sbjct: 125 LAGVEGEEVLINVE--------EGTIGLQFDWLADAKLVLTDELIKEMLRQRKDAGVL 174


>gi|84684620|ref|ZP_01012521.1| hypothetical protein 1099457000260_RB2654_13384 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667599|gb|EAQ14068.1| hypothetical protein RB2654_13384 [Rhodobacterales bacterium
           HTCC2654]
          Length = 194

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +++PVIE+M +  V++ L       LQI  ++ +G + + D   ++ 
Sbjct: 4   LVARTAIDRRLADIVRPVIEDMGYELVRLRLQGGNTQTLQIMADKPEGGIEVDDLSAINT 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+   LDVE+ IEG Y LEVSSPGIDRP+ R  DF  W+G +   E       +++  G 
Sbjct: 64  ALGATLDVEDPIEGEYNLEVSSPGIDRPLTRYKDFDTWDGWIAKVETSELIEGRKRFKGT 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT +    +E E +G      + I ++FD L  A+L++TDEL+   L       
Sbjct: 124 LQGTEDGEILIEIEDKG----EPVTIGLTFDLLADAKLVLTDELIAEMLKQRKDAG 175


>gi|75674220|ref|YP_316641.1| hypothetical protein Nwi_0021 [Nitrobacter winogradskyi Nb-255]
 gi|91207993|sp|Q3SWQ2|RIMP_NITWN RecName: Full=Ribosome maturation factor rimP
 gi|74419090|gb|ABA03289.1| Protein of unknown function DUF150 [Nitrobacter winogradskyi
           Nb-255]
          Length = 260

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            EPR+  + G+A  ++++  PV++ M +R V+I +  E    +QI  ER DG++ + DCE
Sbjct: 15  DEPRLVVEPGVAARVAAIAAPVLQGMGYRLVRIKVSGEAGCTVQIMAERPDGSIQIEDCE 74

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+A+SP+LDV + I+  YRLE+SSPGIDRP+VR+SDF R+ GH+   E+ ++   +++
Sbjct: 75  AISKALSPVLDVADPIDKAYRLEISSPGIDRPLVRRSDFERYAGHLAKIEMAVAHQGRKR 134

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
             G + G  +    L ++     + +E ++ +  + +  ARL++TDEL+  S+       
Sbjct: 135 FRGVLQGVEDNAVRLHRDD-IRNNDDESEVMLVMEDIADARLVLTDELIAESMRRGKIAE 193


>gi|300024994|ref|YP_003757605.1| hypothetical protein Hden_3493 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526815|gb|ADJ25284.1| protein of unknown function DUF150 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 213

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/183 (33%), Positives = 107/183 (58%), Gaps = 6/183 (3%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK---NLLLQIFVERDDGNMT 65
                R   + G+A +++++++PV+E++ FR V++ +       + ++Q+  ER DG++T
Sbjct: 15  GPDTRRFLRETGVAAEVAAIVEPVLEDLGFRLVRVKVQGGGATADKIVQLMAERPDGSIT 74

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           + DCE +S+ +SP+LDV + + G YRLEVSSPGIDRP+VR SDF  W+GH    E+  + 
Sbjct: 75  VDDCETISKQVSPVLDVADPVSGAYRLEVSSPGIDRPLVRPSDFEDWSGHEAKIELTEAV 134

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           G ++K  G + G  +    +E +     +     + +    +  ARL++TDEL+R +L  
Sbjct: 135 GGRRKFKGMLEGFEDGEVRIEAD---TGEHGIQHLGLPVHLISDARLVLTDELIREALAR 191

Query: 186 YGS 188
              
Sbjct: 192 AKK 194


>gi|126728007|ref|ZP_01743823.1| hypothetical protein SSE37_18492 [Sagittula stellata E-37]
 gi|126710972|gb|EBA10022.1| hypothetical protein SSE37_18492 [Sagittula stellata E-37]
          Length = 189

 Score =  159 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +    G+   ++ ++ PVIE+M F  V++ L      LLQI  ER +G + + +C E+S 
Sbjct: 4   MIAKTGMDLRLAEIVAPVIEDMGFELVRLRLQSGNTPLLQIMAERPEGGIEVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G 
Sbjct: 64  AVSAVLDVEDPIVEAYTLEVSSPGIDRPLTRLKDFDTYEGYEARLETTDLIEGRKRFRGI 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G   +   +  +        E  I + FD L  A+L++TDEL+R  L    + A
Sbjct: 124 LAGVEGSEVLINVD--------EGTIGLQFDWLADAKLVMTDELVREMLKARKTAA 171


>gi|209544213|ref|YP_002276442.1| hypothetical protein Gdia_2067 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|259585817|sp|A9HF10|RIMP_GLUDA RecName: Full=Ribosome maturation factor rimP
 gi|209531890|gb|ACI51827.1| protein of unknown function DUF150 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 207

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 8/174 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
            GL   +++++ PV+ +M F  V++++L  ++  +QI  +R DG  + + DCE++S A+ 
Sbjct: 9   TGLDAKVAAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVG 68

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G ++G
Sbjct: 69  AVLDVEDPLPGAWTLEVSSAGIDRPLTRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLG 128

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
             +    L  E          ++A+    +  ARL++TDEL+ AS +   +  G
Sbjct: 129 AEDGFGRLRLED-------GTEVALPLSDMRRARLVLTDELIAASAHMMRAPGG 175


>gi|83942069|ref|ZP_00954531.1| hypothetical protein EE36_07533 [Sulfitobacter sp. EE-36]
 gi|83953119|ref|ZP_00961841.1| hypothetical protein NAS141_12461 [Sulfitobacter sp. NAS-14.1]
 gi|83842087|gb|EAP81255.1| hypothetical protein NAS141_12461 [Sulfitobacter sp. NAS-14.1]
 gi|83847889|gb|EAP85764.1| hypothetical protein EE36_07533 [Sulfitobacter sp. EE-36]
          Length = 192

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 8/178 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ +I PVIE+M F  V++ L+  K+  LQ+  +R DG + + +   +SQ
Sbjct: 5   LIAKAAIDRRMAEIITPVIEDMGFELVRVRLMSGKSTTLQVMADRPDGGIEVDELALISQ 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +IS ++DVE+ I   Y LEVSSPGIDRP+ R  DF  + G+    E       +++  G+
Sbjct: 65  SISAVMDVEDPILDEYTLEVSSPGIDRPLTRLKDFEMFEGYEAKIETGELIDGRRRFKGE 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAGL 192
           + G  +    +  E        E  I + FD L  A+L++TD+L++  L    +   +
Sbjct: 125 LAGVEDDEVLINVE--------EGTIGLKFDWLTDAKLVLTDDLIKEMLRQRKASGAI 174


>gi|260576185|ref|ZP_05844178.1| protein of unknown function DUF150 [Rhodobacter sp. SW2]
 gi|259021665|gb|EEW24968.1| protein of unknown function DUF150 [Rhodobacter sp. SW2]
          Length = 199

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++ P IE + F  V+I L+  K   LQI  ER DG + + +C  +S 
Sbjct: 4   LIAKTAIDRRLAEIVTPAIEGLGFELVRIRLMGGKVRTLQIMAERPDGGIVVDECAAIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S ILDVE+ +E +Y LEVSSPGIDRP+ R  DF  W G+    E       +++  G+
Sbjct: 64  AVSAILDVEDPVEENYILEVSSPGIDRPLTRLKDFDTWQGYEARIETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G       +E E        E  I + FD L  A+L++TDEL+   L    +  
Sbjct: 124 LRGIQGDEVLIEIE--------EGIIGLQFDWLSDAKLVLTDELIAEMLRQRKASG 171


>gi|312115895|ref|YP_004013491.1| hypothetical protein Rvan_3197 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221024|gb|ADP72392.1| protein of unknown function DUF150 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 221

 Score =  157 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 99/177 (55%), Gaps = 2/177 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           R   + G A D++++I+PV+E+M FR V++++ +     +QI  ++ DG + + DC ++S
Sbjct: 21  RFTREFGAAADLAALIEPVLEDMGFRLVRVTMSKRDGATIQIMADKADGAINVDDCAQIS 80

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ISP+LD  + I+  Y LEVSSPGIDR +VR SDF  W G     E+      +++  G
Sbjct: 81  RRISPLLDAHDPIKDRYYLEVSSPGIDRILVRPSDFEDWAGFETKVELKELIDGRKRFRG 140

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
            + G       L+ +    +      I +  D +  A+L++TDEL+RASL    +  
Sbjct: 141 ILEGYENGEMLLQVQLD--EKGEPQTIGLPVDLIHDAKLVLTDELIRASLAKAKAAG 195


>gi|260461983|ref|ZP_05810228.1| protein of unknown function DUF150 [Mesorhizobium opportunistum
           WSM2075]
 gi|259032230|gb|EEW33496.1| protein of unknown function DUF150 [Mesorhizobium opportunistum
           WSM2075]
          Length = 215

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 2/179 (1%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           + S+ + RI  + G+   I+ +IQPV+  + FR V++ L  +  L LQI  ER+DG MT+
Sbjct: 4   MTSEGDDRIIRESGIDARIALIIQPVLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTMTV 63

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DCEE+S+A+SP LDV++ IE  Y LEVSSPGIDRP+VRKSDF+ W GH+V  E  +   
Sbjct: 64  EDCEEVSRAVSPALDVDDPIEKAYHLEVSSPGIDRPLVRKSDFVTWTGHLVKMETSVVVA 123

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           D+++  GKI    E    +E++K       E  + + +D++   RLI+TD+L+R +L+ 
Sbjct: 124 DRKRFKGKIAEAGENDVLIERDKAAY--GEEPTVRVPYDAISETRLILTDDLIRDALSK 180


>gi|146337224|ref|YP_001202272.1| hypothetical protein BRADO0050 [Bradyrhizobium sp. ORS278]
 gi|259585732|sp|A4YJE6|RIMP_BRASO RecName: Full=Ribosome maturation factor rimP
 gi|146190030|emb|CAL74022.1| conserved hypothetical protein; putative YhbC-like protein
           [Bradyrhizobium sp. ORS278]
          Length = 233

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/174 (33%), Positives = 104/174 (59%), Gaps = 2/174 (1%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
            + G+A  +++V  PV++ M +R V+I +  E    +Q+  ER DG M + DCE +S+A+
Sbjct: 1   MEPGVAARVAAVADPVLQGMGYRLVRIRISGESGCTVQVMAERPDGTMQIEDCEAVSRAL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           SP+LD+ + I+  YRLE+SSPGIDRP+VR+SDF R  GH+V  E+ ++  ++++  G I 
Sbjct: 61  SPVLDIADPIDRAYRLEISSPGIDRPLVRRSDFERHVGHLVKIEMAVAYQNRKRFRGIIK 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           G    G  + ++   +    +  + +    +  A++++TDEL+  S+    +  
Sbjct: 121 GVEGDGVRITRDDVAKDA--DPDVVLPMADIGDAKMVLTDELIAESMRRGKAAE 172


>gi|254450327|ref|ZP_05063764.1| hypothetical protein OA238_928 [Octadecabacter antarcticus 238]
 gi|198264733|gb|EDY89003.1| hypothetical protein OA238_928 [Octadecabacter antarcticus 238]
          Length = 209

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +I P +E++ F  V++ L+  K  +LQI  +R DG + + DC E+S 
Sbjct: 16  LIARAAMDRRITEIITPTVEDLGFEVVRVRLMTGKESILQIMAQRPDGTIEVDDCGEIST 75

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I+  + LEVSSPGIDRP+ R  DF++W+G+    E       +++  G 
Sbjct: 76  AVSALLDVEDPIKDVFTLEVSSPGIDRPLTRFKDFVQWDGNEAKIETEELIDGRRRFKGM 135

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G       +E E +G      + I + F+ L  A+L++T++L+R  L       
Sbjct: 136 LRGVEGDEVLIEIEDKG----EPVTIGLKFEWLTDAKLVLTEDLIRGVLRGRKDAG 187


>gi|319403632|emb|CBI77217.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 225

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 81/190 (42%), Positives = 118/190 (62%), Gaps = 2/190 (1%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M     +    EPR+F + G+A  +S++I P+++ + FR V+  LL    L LQI VER 
Sbjct: 18  MNEIERMGDIDEPRLFEEDGVAARVSALIIPLLKPLGFRLVRTKLLGLNGLTLQIMVERT 77

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G MT+ DCE +S+A++P+LD+EN+IE  Y LE+SSPGIDR +VRKSDF+ W GH+   E
Sbjct: 78  NGTMTIEDCEIVSRAVAPLLDIENVIERKYHLEISSPGIDRLLVRKSDFVHWQGHLAKIE 137

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                  +QKL GK+   ++ GF L  EK   +   E+ I ISF ++ +A LI+TDEL+R
Sbjct: 138 TNTVIDGRQKLRGKLKDITQNGFTLNIEKTAHR--EEINIFISFSNITNAHLILTDELIR 195

Query: 181 ASLNNYGSYA 190
            +L       
Sbjct: 196 DTLKKNKDLD 205


>gi|255264773|ref|ZP_05344115.1| hypothetical protein TR2A62_2551 [Thalassiobium sp. R2A62]
 gi|255107108|gb|EET49782.1| hypothetical protein TR2A62_2551 [Thalassiobium sp. R2A62]
          Length = 190

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +IQP++E M +  V+I L+  K   LQI  ++ DG + + DC E+S 
Sbjct: 4   LVAKAAIDRRIAEIIQPMMESMGYELVRIRLMSGKATTLQIMAQKPDGTIEVDDCAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF +W G+    E       +++  G+
Sbjct: 64  AVSALLDVEDPILDAYELEVSSPGIDRPLTRVKDFAQWEGYEAKIETDELIDGRRRFKGQ 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +E E        E  I + F+ L  A+L++TD+L+R  L       
Sbjct: 124 LAGTEGDEILIEIE--------EGTIGLKFEWLSDAKLVLTDDLIRDVLRGRKDAG 171


>gi|296114400|ref|ZP_06833054.1| hypothetical protein GXY_01428 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979161|gb|EFG85885.1| hypothetical protein GXY_01428 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 210

 Score =  155 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 52/181 (28%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-GNMTLRDC 69
            +  +    GL   I+ +I P + +M F  V+++++  ++  +QI  +R D   +T+ DC
Sbjct: 1   MDADLPSLTGLDARIADMIGPALVDMGFELVRVAVMGRESPTVQIMADRADGSQITINDC 60

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E++S A+  ILDVE+ + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    ++
Sbjct: 61  EQISHAVGAILDVEDPLSGEWTLEVSSAGIDRPLTRPKDWDRYAGHLAKAEMNMPVDGRK 120

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
           +  G ++G  +    +  +          ++A+ F+ +  ARL++TD L+ AS       
Sbjct: 121 RFSGIVLGARDGHGLMRLDD-------GAEVALPFEEMRKARLVLTDALIEASARMAHPG 173

Query: 190 A 190
            
Sbjct: 174 E 174


>gi|13474626|ref|NP_106195.1| hypothetical protein mlr5550 [Mesorhizobium loti MAFF303099]
 gi|34223133|sp|Q98BJ1|RIMP_RHILO RecName: Full=Ribosome maturation factor rimP
 gi|14025380|dbj|BAB51981.1| mlr5550 [Mesorhizobium loti MAFF303099]
          Length = 215

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 75/177 (42%), Positives = 114/177 (64%), Gaps = 2/177 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S+ + RI  + G+   I+ ++QPV+  + FR V++ L  +  L LQI  ER+DG MT+ D
Sbjct: 6   SEGDDRIIRESGIDARIALIVQPVLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTMTVED 65

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S+A+SP LDV++ IE  Y LEVSSPGIDRP+VRKSDF+ W GH+V  E  +   D+
Sbjct: 66  CEEVSRAVSPALDVDDPIEKAYHLEVSSPGIDRPLVRKSDFVTWTGHLVKMETSVIVADR 125

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           ++  GKI    E    +E++K       E  + + +D++   RLI+TD+L+R +L+ 
Sbjct: 126 KRFKGKIAEAGENDVLIERDKAAY--GEEPTVRVPYDAIAETRLILTDDLIRDALSK 180


>gi|114769757|ref|ZP_01447367.1| hypothetical protein OM2255_09321 [alpha proteobacterium HTCC2255]
 gi|114549462|gb|EAU52344.1| hypothetical protein OM2255_09321 [alpha proteobacterium HTCC2255]
          Length = 183

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 8/172 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++S++QPVIE++ +  V+I L+  K   LQI  ++ +G + + DC ++S 
Sbjct: 4   LIAKSAIDKRMASIVQPVIEDLGYELVRIRLMSGKATTLQIMADKPNGGIDVNDCSKIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS ILDVE+ IE  Y LEVSSPG+DRP+ R  DF  WNG  +  E       +++  G 
Sbjct: 64  EISAILDVEDPIEAEYALEVSSPGMDRPLTRLKDFQTWNGFEIKVETSELIDGQRRFKGL 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
             G  +    +E  +          I + F+ L  A+L++TDEL+ AS    
Sbjct: 124 SRGIEDNDVLIEIPQ--------GTIGLDFEWLSDAKLVLTDELVAASQKGR 167


>gi|84514879|ref|ZP_01002242.1| hypothetical protein SKA53_11683 [Loktanella vestfoldensis SKA53]
 gi|84511038|gb|EAQ07492.1| hypothetical protein SKA53_11683 [Loktanella vestfoldensis SKA53]
          Length = 191

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +I PVIE+M F  V++ L+  K   LQI V+R DG + +  C ++S 
Sbjct: 4   LIAKAAVDRRIAEIITPVIEDMGFEVVRVRLMTGKESTLQIMVQRPDGTIEVDQCAQIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS +LDVE+ I   Y LEVSSPGIDRP+ R  DF +W G     E       +++  G+
Sbjct: 64  AISAVLDVEDPIVDVYTLEVSSPGIDRPLTRLKDFDQWKGFEAKIETEELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G       ++ +        E  I + F  L  A+L++TD+L+R  L       
Sbjct: 124 LAGIDGDEVLIDID--------EGTIGLKFAWLSDAKLVLTDDLIRDVLRGRKDAG 171


>gi|319779772|ref|YP_004139248.1| hypothetical protein Mesci_0023 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317165660|gb|ADV09198.1| protein of unknown function DUF150 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 214

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 75/177 (42%), Positives = 113/177 (63%), Gaps = 2/177 (1%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
           S+ + RI  + G+   I+ ++QPV+  + FR V++ L  +  L LQI  ER+DG MT+ D
Sbjct: 6   SEGDDRIIRESGIDARIALIVQPVLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTMTVED 65

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           CEE+S+A+SP LDV++ IE  Y LEVSSPGIDRP+VRKSDF  W GH+V  E  +   D+
Sbjct: 66  CEEVSRAVSPALDVDDPIEKAYHLEVSSPGIDRPLVRKSDFTTWTGHLVKMETSIVVADR 125

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
           ++  GKI    E    +E++K       E  + + +D++   RLI+TD+L+R +L+ 
Sbjct: 126 KRFKGKIAEAGEDDVLIERDKAAY--GEEPTVRVPYDAIADVRLILTDDLIRDALSK 180


>gi|115522228|ref|YP_779139.1| hypothetical protein RPE_0199 [Rhodopseudomonas palustris BisA53]
 gi|122298064|sp|Q07V75|RIMP_RHOP5 RecName: Full=Ribosome maturation factor rimP
 gi|115516175|gb|ABJ04159.1| protein of unknown function DUF150 [Rhodopseudomonas palustris
           BisA53]
          Length = 272

 Score =  154 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 109/179 (60%), Gaps = 2/179 (1%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           EPR+  + G+A  +++V  PV+  M +R V+I +  E    +QI  ER DG M + DCE 
Sbjct: 28  EPRLVVEPGVAARVAAVAGPVLHGMGYRLVRIKVSGELGCTVQIMAERPDGTMLIEDCEA 87

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+SP+LDV + I+  YRLEVSSPGIDRP+VR+SDF R+ G++V  ++ +    +++ 
Sbjct: 88  ISKALSPVLDVADPIDKAYRLEVSSPGIDRPLVRRSDFERYAGYLVKIDMAVPHQGRKRF 147

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
            G + G       L++E  G +  ++  + ++ + +  ARL++TDEL+  S+       
Sbjct: 148 RGILGGIEGDAVHLQRE--GVRGDDDPAVLLTIEDISDARLVLTDELIAESMRRGKIAE 204


>gi|315122011|ref|YP_004062500.1| hypothetical protein CKC_01305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495413|gb|ADR52012.1| hypothetical protein CKC_01305 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 186

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 134/186 (72%), Positives = 159/186 (85%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           MESTH   SKYEPRIFGD+GL  D+S++IQPVIEEM FR VQ+SLLEE+NL+LQI VERD
Sbjct: 1   MESTHVFCSKYEPRIFGDVGLGQDVSNIIQPVIEEMGFRIVQVSLLEERNLILQILVERD 60

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           +G MTL DCEE+S+AISPILDVENIIE HY+LE+SSPGI+RPMVRKSDF RWNGH+VACE
Sbjct: 61  NGTMTLCDCEEVSKAISPILDVENIIEEHYQLEISSPGINRPMVRKSDFERWNGHIVACE 120

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           +  SSGDK+KL+GKI+G S+  FFLEK++   KD    QIA+SFDSLLSA+L++TDELL 
Sbjct: 121 VASSSGDKKKLVGKIVGKSDLDFFLEKKEEDLKDAGVSQIAVSFDSLLSAKLVITDELLC 180

Query: 181 ASLNNY 186
           ASLN  
Sbjct: 181 ASLNRK 186


>gi|58040012|ref|YP_191976.1| hypothetical protein GOX1579 [Gluconobacter oxydans 621H]
 gi|81351770|sp|Q5FQM6|RIMP_GLUOX RecName: Full=Ribosome maturation factor rimP
 gi|58002426|gb|AAW61320.1| Hypothetical protein associated with nus operon [Gluconobacter
           oxydans 621H]
          Length = 203

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 89/165 (53%), Gaps = 8/165 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
            GL   I+  I P + ++ +  V++S+L      +QI  +R +G+ +++ DCE++S A  
Sbjct: 16  TGLEARIAERIAPTLADLGYELVRLSVLGRDTPTIQIMADRANGSLISVEDCEQISHAAG 75

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDV++ I G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G +MG
Sbjct: 76  AILDVDDPIPGAWMLEVSSAGIDRPLTRAKDWERFAGHLAKAELDVPLNGRRRFSGTVMG 135

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
             +    +  +          +  +    +  ARL++TD L+ AS
Sbjct: 136 ARDGNAIIRLDD-------GTEAVLPLVDIRKARLVLTDALIEAS 173


>gi|304320432|ref|YP_003854075.1| hypothetical protein PB2503_04292 [Parvularcula bermudensis
           HTCC2503]
 gi|303299334|gb|ADM08933.1| hypothetical protein PB2503_04292 [Parvularcula bermudensis
           HTCC2503]
          Length = 174

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 6/165 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             ++ ++ P+IE   +  +++ L   K   LQI  ER DG MT  DC  LS+A+S +L+ 
Sbjct: 6   AALTDLLLPIIETEGYELIRLRLTGAKQQTLQIMAERPDGTMTAEDCARLSRAVSAVLEE 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I G Y LEVSSPGIDRP+ R  D+ RW G V   E+      +++  G + G     
Sbjct: 66  ADPISGEYVLEVSSPGIDRPLTRLKDYARWEGFVAKIELSQPVEGQKRYRGTLAGVENDD 125

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
             ++ +        E    I F  +   +L++TDEL+  SL    
Sbjct: 126 VCIDLDG------EEETALIPFSIIAGGKLVMTDELIAESLRRAK 164


>gi|126734453|ref|ZP_01750200.1| hypothetical protein RCCS2_09839 [Roseobacter sp. CCS2]
 gi|126717319|gb|EBA14183.1| hypothetical protein RCCS2_09839 [Roseobacter sp. CCS2]
          Length = 192

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 8/176 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +I PV+E+M F  V++ L+  K  +LQ+ V+R DG + + +C ++S 
Sbjct: 5   LIAKAAIDRRIAEIITPVVEDMGFEVVRVRLMTGKESILQVMVQRPDGQIEVDECGQVST 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S ILDVE+ I   Y LEVSSPGIDRP+ R  DF +W G     E       +++  G 
Sbjct: 65  ALSAILDVEDPILDVYTLEVSSPGIDRPLTRMKDFDQWEGFEAKIETDELIDGRRRFKGP 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + GT      +           E  I + F+ L  A+L++TDEL+R  L       
Sbjct: 125 LAGTEGDEVLITI--------AEGTIGLKFEWLSDAKLVLTDELIRDVLRGRKDAG 172


>gi|162147157|ref|YP_001601618.1| hypothetical protein GDI_1362 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785734|emb|CAP55305.1| conserved protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 193

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 52/168 (30%), Positives = 97/168 (57%), Gaps = 8/168 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPILDVE 83
           +++++ PV+ +M F  V++++L  ++  +QI  +R DG  + + DCE++S A+  +LDVE
Sbjct: 1   MAAIVAPVLADMGFELVRVAILGRESPTVQIMADRADGTLIAIEDCEQISHAVGAVLDVE 60

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + + G + LEVSS GIDRP+ R  D+ R+ GH+   E+ +    +++  G ++G  +   
Sbjct: 61  DPLPGAWTLEVSSAGIDRPLTRAKDWTRFAGHLAKAEVNIPIDGRKRFSGILLGAEDGFG 120

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            L  E          ++A+    +  ARL++TDEL+ AS +   +  G
Sbjct: 121 RLRLED-------GTEVALPLSDMRRARLVLTDELIAASAHMMRAPGG 161


>gi|310817129|ref|YP_003965093.1| Ribosome maturation factor rimP [Ketogulonicigenium vulgare Y25]
 gi|308755864|gb|ADO43793.1| Ribosome maturation factor rimP [Ketogulonicigenium vulgare Y25]
          Length = 218

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 15/187 (8%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   ++ ++QPVIE+M F  V+I ++  K   LQI  ++ DG + + DC  +S 
Sbjct: 4   LIARAAIDRRVAEIVQPVIEDMGFELVRIRVMTGKETTLQIMAQKPDGTIEVDDCAAIST 63

Query: 75  -----------AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
                      A+S +LDVE+ I  +Y LEVSSPGIDRP+ R  DF  W+G+    E   
Sbjct: 64  AVSAGLDPPPPAVSAVLDVEDPIVENYTLEVSSPGIDRPLTRLKDFDLWDGYTAKIETEE 123

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +++  G++ GT      +E +         + I + F+ L  A+L++TDEL+R  L
Sbjct: 124 LIDGRRRFKGELRGTEGDEILIELDDAA----EPVTIGLKFEWLSDAKLVLTDELIRDVL 179

Query: 184 NNYGSYA 190
                  
Sbjct: 180 RGRKDAG 186


>gi|114571579|ref|YP_758259.1| hypothetical protein Mmar10_3040 [Maricaulis maris MCS10]
 gi|122314890|sp|Q0AK72|RIMP_MARMM RecName: Full=Ribosome maturation factor rimP
 gi|114342041|gb|ABI67321.1| protein of unknown function DUF150 [Maricaulis maris MCS10]
          Length = 178

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 7/178 (3%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-GNMTLRDCEELS 73
           +         I ++ +PV  E++   V++ ++  K   LQI  +R +   + + DC   S
Sbjct: 1   MKTKSPQDDRILALAEPVAAELALEVVRVRIMSGKRPRLQIMADRTNGTGIEVEDCARFS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+S + +VE+ + G Y LEVSSPGIDRP+     F RW G+ V  E+   +  +++  G
Sbjct: 61  RALSEVFEVEDPVAGEYDLEVSSPGIDRPLTTLPHFERWEGNEVKIELDRLAEGRKRFRG 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            + G  +    L+ +        +    I FD ++ A+L++TD L+ A L   G  A 
Sbjct: 121 ILAGVEDGHVGLDMDG------EDDTTMIPFDWIVEAKLVLTDALIEADLKARGRGAA 172


>gi|300718579|ref|YP_003743382.1| hypothetical protein [Erwinia billingiae Eb661]
 gi|299064415|emb|CAX61535.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 195

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                L   ++ +I   +E + +  V I  +  +   L+I+++  +  + + DC ++S  
Sbjct: 44  VALSTLEQKLTELITAPVEALGYELVGIEFVRGRTSTLRIYIDS-ENGINVDDCADVSHQ 102

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S + DVE+ I   Y LEVSSPG++RP+   + + ++ G  V+  + ++  +++K  G I
Sbjct: 103 VSAVFDVEDPITVAYNLEVSSPGLERPLFTAAHYAQFIGEEVSLVLRMAVQNRRKWQGII 162

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E   E          +  ++  A L+ 
Sbjct: 163 KSVEGEMITVAVEGNDEV--------FALSNIQKANLVP 193


>gi|83595107|ref|YP_428859.1| hypothetical protein Rru_A3778 [Rhodospirillum rubrum ATCC 11170]
 gi|91208354|sp|Q2RMS3|RIMP_RHORT RecName: Full=Ribosome maturation factor rimP
 gi|83578021|gb|ABC24572.1| Protein of unknown function DUF150 [Rhodospirillum rubrum ATCC
           11170]
          Length = 225

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 3/176 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAI 76
           D  + G +  ++ P ++ M +  V+++LL  +N  LQ+  ER DG  MT+ DCE +S+A+
Sbjct: 35  DARMMGHLEKLLAPTLDAMGYEVVRVTLLGSQNPTLQVMAERLDGVAMTVSDCETISRAL 94

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             +LDVE+ I G Y LE+SSPGIDRP+ R  D+ R+ GH    E        +++ G ++
Sbjct: 95  GALLDVEDPIAGRYSLEISSPGIDRPLTRPKDYARFAGHEARIETDRLIEGHRRMKGLLL 154

Query: 137 GTSET-GFFLE-KEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           G  E     L   E +  +D    ++ I F +++ A+L++TD L+  +L +  + A
Sbjct: 155 GIDEDRTVRLRLIEGKAAEDGTLPEVEIPFGAIVKAKLLLTDALIAKALKDAEALA 210


>gi|83945004|ref|ZP_00957370.1| hypothetical protein OA2633_10254 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851786|gb|EAP89641.1| hypothetical protein OA2633_10254 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 178

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 6/170 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              I  + +P+ E +    V++ ++  K   +QI  ER DG M + DC  LS+A+S + D
Sbjct: 8   DKRILEIAEPLAETLGLEIVRVRVMGGKKTTVQIMAERHDGTMVVEDCARLSRALSEVFD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + + G Y LEVSSPGIDRP+   S F RW G     E+     ++++  G + G  + 
Sbjct: 68  EADPVSGEYDLEVSSPGIDRPLTALSHFERWEGFEAKIELDRLVENRKRFRGMLAGIEDD 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
              ++          +    I F+ +  A+L++TD L+ ASL   G   G
Sbjct: 128 NVLMDLAG------EDDTAVIPFEWIADAKLVMTDALVEASLKARGPIEG 171


>gi|288959697|ref|YP_003450038.1| hypothetical protein AZL_028560 [Azospirillum sp. B510]
 gi|288912005|dbj|BAI73494.1| hypothetical protein AZL_028560 [Azospirillum sp. B510]
          Length = 166

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 9/172 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M   G I  +I P +E M +  V++ +   +  +LQI  ER DG  MT+ DC ++S+++S
Sbjct: 1   MDATGRIEQIITPSVEAMGYEVVRVQISGGQRAVLQIMAERADGAPMTVEDCADISRSVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ R  DF R+ G     E  ++   +++  G + G
Sbjct: 61  ALLDVEDPIREAYTLEVSSPGIDRPLTRLKDFERFAGFEARLESRMAIDGRKRFKGMLKG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
             +    ++ E+            + FD++L A+L++TD+L+RAS       
Sbjct: 121 VEDGLVCIDTEQGAA--------RLEFDNILRAKLVLTDDLIRASQEQQDGP 164


>gi|188532502|ref|YP_001906299.1| YhbC-like protein [Erwinia tasmaniensis Et1/99]
 gi|188027544|emb|CAO95391.1| YhbC-like protein [Erwinia tasmaniensis Et1/99]
          Length = 192

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S ++
Sbjct: 46  LEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVM 104

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 105 DVEDPITVAYNLEVSSPGLDRPMFTAEHYARFTGEEVSLVLRMAVQNRRKWQGIIKSVEG 164

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E   E          +  ++  A L+ 
Sbjct: 165 EMITVAVEGNDEV--------FALSNIQKANLVP 190


>gi|254439640|ref|ZP_05053134.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
 gi|198255086|gb|EDY79400.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
          Length = 188

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/170 (32%), Positives = 95/170 (55%), Gaps = 4/170 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   I+ +I P IE++ F  V++ L+  K  +LQI  ++ DG + + DC E+S A+S +L
Sbjct: 1   MDRRITEIITPTIEDLGFEVVRVRLMTGKESILQIMAQKPDGTIEVDDCGEISTAVSALL 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I+  + LEVSSPGIDRP+ R  DF++W+G+    E       +++  G + G   
Sbjct: 61  DVEDPIKDVFTLEVSSPGIDRPLTRLKDFVQWDGNEAKIETEELIDGRRRFKGMLRGVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
               +E E+ G      + I + F+ L  A+L++T++L+R  L       
Sbjct: 121 DEVLIEIEENG----EPVTIGLKFEWLTDAKLVLTEDLIRGVLRGRKDAG 166


>gi|89067478|ref|ZP_01154991.1| hypothetical protein OG2516_11576 [Oceanicola granulosus HTCC2516]
 gi|89047047|gb|EAR53101.1| hypothetical protein OG2516_11576 [Oceanicola granulosus HTCC2516]
          Length = 197

 Score =  148 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     +   I+ +I PVI +M F +V++ L      +LQI  ++ DG + + +C E+S 
Sbjct: 4   LIAKTAMDRRITEIIDPVITDMGFETVRVRLQGGNTPVLQIMAQKPDGTIEVDECAEIST 63

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDVE+ I   Y LEVSSPGIDRP+ R  DF RW G+V   E       +++  G+
Sbjct: 64  AVSAVLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDRWQGYVAKLETTELIDGRRRFKGE 123

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
           + G       +E E+ G      + I + FD L  A+L++TDEL+R  L       
Sbjct: 124 LGGVEGGEVLIEIEENG----EPVTIGLQFDWLSDAKLVLTDELIREVLKTRKDAG 175


>gi|83313173|ref|YP_423437.1| hypothetical protein amb4074 [Magnetospirillum magneticum AMB-1]
 gi|123540593|sp|Q2VZU7|RIMP_MAGSA RecName: Full=Ribosome maturation factor rimP
 gi|82948014|dbj|BAE52878.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
           magneticum AMB-1]
          Length = 166

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 6/169 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M L   + ++I P ++ M +  V++ L  ++ L LQI  +R DG  M + DC ++S+++S
Sbjct: 1   MDLQSRLEALIAPSLDAMGYELVRVQLQGKQRLTLQIMADRKDGVMMAVDDCADISRSVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ R  DF+ W G     E       +++  GK++G
Sbjct: 61  ALLDVEDPISAAYTLEVSSPGIDRPLTRAKDFVAWAGFEAKMESCQPIDGRKRFRGKLLG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
             E G  +             +IAI    +  A+L++TDEL+ A+L + 
Sbjct: 121 LDEAGVNVRLVIEAA-----GEIAIPLADVRGAKLVLTDELIAATLKDQ 164


>gi|317046739|ref|YP_004114387.1| hypothetical protein Pat9b_0506 [Pantoea sp. At-9b]
 gi|316948356|gb|ADU67831.1| protein of unknown function DUF150 [Pantoea sp. At-9b]
          Length = 202

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ ++  + + DC ++S  +S ++
Sbjct: 56  LEQKLTELISAPVEALGYELVGIEFIRGRTSTLRIYIDSEE-GINVDDCADVSHQVSAVM 114

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 115 DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFAGEEVGLVLRMAVQNRRKWQGIIKSVEG 174

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 175 EMITVTVEGKDEV--------FALSNIQKANLVP 200


>gi|148259242|ref|YP_001233369.1| hypothetical protein Acry_0222 [Acidiphilium cryptum JF-5]
 gi|259585658|sp|A5FV18|RIMP_ACICJ RecName: Full=Ribosome maturation factor rimP
 gi|146400923|gb|ABQ29450.1| protein of unknown function DUF150 [Acidiphilium cryptum JF-5]
          Length = 201

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 96/167 (57%), Gaps = 9/167 (5%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAI 76
             GL G I+ +I P +E + +  V+++++ ++   +QI  +R D   ++L DCE +S  +
Sbjct: 35  HTGLEGRIAELIAPGLESIGYELVRVAIMGKQTPTVQIMADRADQTPLSLDDCERISHLV 94

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKI 135
           S +LDV++ I   + LEVSS GIDRP+ R  D+ R+ GH+   ++ + +   +++L G +
Sbjct: 95  SAVLDVDDPISSAWTLEVSSAGIDRPLTRVKDWNRYAGHLARIDLDVPTASGRKRLTGTV 154

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +G  E    ++ +       +   + +    +  A+L++T+EL++A+
Sbjct: 155 LGADEAQARVKLD-------SGETVDLPHAHIRRAKLVLTEELIKAT 194


>gi|23016101|ref|ZP_00055861.1| COG0779: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 165

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 94/169 (55%), Gaps = 7/169 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAIS 77
           M L   + ++I P ++ M +  V++ L  ++ L LQI  +R DG  M + DC ++S+++S
Sbjct: 1   MDLQSRLEALIAPSLDAMGYELVRVQLQGKQRLTLQIMADRKDGVMMAVDDCADISRSVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ R  DF  W G     E       +++  GK++G
Sbjct: 61  ALLDVEDPISAAYTLEVSSPGIDRPLTRAKDFAAWAGFEAKMESCQPIDGRKRFRGKLLG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
             ETG  +         +   +++I    +  A+L++TDEL+ A++ + 
Sbjct: 121 LDETGAHVRL------AVETGEVSIPLADVRGAKLVLTDELIAATVKDQ 163


>gi|144897847|emb|CAM74711.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 171

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 9/173 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-GNMTLRDCEELSQAIS 77
           M L   + ++  P +E M +  V++      +  LQ+  ER D  NMT+ DC ++S+++S
Sbjct: 1   MDLQQRLEALFAPTLEAMGYEMVRVMFQGRSHPTLQVMAERKDGRNMTVDDCADISRSLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I+  Y LEVSSPGIDRP+ R  DF+ W G  V  E ++    +++  GK++G
Sbjct: 61  ALLDVEDPIQSAYALEVSSPGIDRPLTRAKDFITWAGFEVKLEALVGVDGRKRFRGKLLG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
                  L  +          ++++    L SA+L++TDEL+ A   +    A
Sbjct: 121 LEGEAVRLFADG--------AEVSVPLTDLKSAKLVLTDELIAAVTRDEDPQA 165


>gi|78485465|ref|YP_391390.1| hypothetical protein Tcr_1121 [Thiomicrospira crunogena XCL-2]
 gi|91207998|sp|Q31GK7|RIMP_THICR RecName: Full=Ribosome maturation factor rimP
 gi|78363751|gb|ABB41716.1| conserved hypothetical protein with DUF150 domain [Thiomicrospira
           crunogena XCL-2]
          Length = 151

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 9/157 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I ++++P IE M F+      L   K+  L+I++++D+  +T+ DC ++S+ +S
Sbjct: 1   MTLEDKIENLLRPTIETMGFQFWGCEYLPAGKHSTLRIYIDKDEVGVTVDDCGKVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            I+DVE+ I   Y LEVSSPG+DRP+     +  + G  V          +++  G +  
Sbjct: 61  AIMDVEDPISNAYMLEVSSPGMDRPLFHPEQYKAYEGQEVQVRTSSPVMGRKRFKGVMSQ 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            SE+   +E +             I F  +  A ++ 
Sbjct: 121 VSESDIAVEVDGEL--------YEIPFSLIDKANVVP 149


>gi|114329059|ref|YP_746216.1| hypothetical protein GbCGDNIH1_2395 [Granulibacter bethesdensis
           CGDNIH1]
 gi|122325995|sp|Q0BPF9|RIMP_GRABC RecName: Full=Ribosome maturation factor rimP
 gi|114317233|gb|ABI63293.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1]
          Length = 178

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 9/177 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQ 74
                L   I+ +I P + +M F  V++++L  +   +QI  +R DG+ + + DCE +S 
Sbjct: 3   VAQTPLEQRIAGLIAPGLADMGFELVRVAVLGREQPTVQIMADRADGSLIGIDDCEAISH 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQKLIG 133
           A   +LDVE++I+  + LEVSS GIDRP+ R  D++R+ GH+   E+ +   G +++  G
Sbjct: 63  AAGALLDVEDVIQSTWNLEVSSAGIDRPLTRVKDWVRFAGHLAKVEMSIPGPGGRRRFSG 122

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
            ++G  ET   L  +          ++++  D L  A+L++TD L+ A+  + G   
Sbjct: 123 TVLGADETAARLRLDD-------GEEVSLPMDGLKKAKLVLTDALIDATAQDAGVAD 172


>gi|27362892|gb|AAN86998.1| YhbC-like protein [Pectobacterium carotovorum subsp. carotovorum]
          Length = 191

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 45  LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSED-GITVDDCADVSHQVSAVL 103

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I     
Sbjct: 104 DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVIKAVDG 163

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 164 EMITITVEGKDEV--------FALSNIQKANLVP 189


>gi|253686984|ref|YP_003016174.1| hypothetical protein PC1_0583 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753562|gb|ACT11638.1| protein of unknown function DUF150 [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 191

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 45  LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSED-GITVDDCADVSHQVSAVL 103

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I     
Sbjct: 104 DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVIKAVDG 163

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 164 EMITITVEGKDEV--------FALSNIQKANLVP 189


>gi|254038336|ref|ZP_04872394.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|293449506|ref|ZP_06663927.1| hypothetical protein ECCG_02538 [Escherichia coli B088]
 gi|226839960|gb|EEH71981.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|291322596|gb|EFE62025.1| hypothetical protein ECCG_02538 [Escherichia coli B088]
          Length = 163

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 17  LEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 75

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 76  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDG 135

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 136 EMITVTVEGKDEV--------FALSNIQKANLVP 161


>gi|114321099|ref|YP_742782.1| hypothetical protein Mlg_1950 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227493|gb|ABI57292.1| protein of unknown function DUF150 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 176

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 9/154 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + ++I P++  M +  V I         LL+I+++  D  +TL DCE  S+ IS +L
Sbjct: 29  EDTLYALIDPLLTGMGYELVGIEYGGPAGKRLLRIYIDSPD-GITLDDCETCSRQISAVL 87

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I G Y LE+SSPG+DRP+ + SD+ R+ G  +   +      +++  G + G  +
Sbjct: 88  DVEDPIPGEYTLEISSPGLDRPIFKASDYDRFAGEQIKIRLSAPWEGRRRFKGVLAGLGD 147

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  +        +    ++ I  D +  ARLI+
Sbjct: 148 EGVRV-------VEAQGDEVQIPLDLIEKARLIL 174


>gi|110833188|ref|YP_692047.1| hypothetical protein ABO_0327 [Alcanivorax borkumensis SK2]
 gi|110646299|emb|CAL15775.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 181

 Score =  143 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 12/168 (7%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM 64
           HFL    E  +         ++ ++ PV+E++ F    +  ++ +  +L++F++  D  +
Sbjct: 21  HFLFVPAERFMSKRT---EQLTELLAPVVEDLGFVLWGVEYIQGRGAVLRVFIDHAD-GI 76

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           ++ DC  +S  +S +LDVE+ I G + LEVSSPG+DRPM   + ++ + G  V  +++  
Sbjct: 77  SVDDCAAVSHEVSGVLDVEDPIPGEFNLEVSSPGMDRPMFDITQYVDYIGEDVQLKLLAP 136

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              K+K+   I+        +E +           + + +  +  ARL
Sbjct: 137 VSGKRKMTAAIVAVDGDTLVVELDGE--------TLRVPYSQVDRARL 176


>gi|237730090|ref|ZP_04560571.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908696|gb|EEH94614.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 163

 Score =  143 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S ++
Sbjct: 17  LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVM 75

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     ++R+ G  V   + ++  +++K  G I     
Sbjct: 76  DVEDPITVAYNLEVSSPGLDRPLFTAEHYVRFLGEEVTLVLRMAVQNRRKWQGVIKAVDG 135

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 136 EMITVTVEGKDEV--------FALSNIQKANLVP 161


>gi|291616008|ref|YP_003518750.1| YhbC [Pantoea ananatis LMG 20103]
 gi|291151038|gb|ADD75622.1| YhbC [Pantoea ananatis LMG 20103]
 gi|327396259|dbj|BAK13681.1| hypothetical UPF0090 protein YhbC [Pantoea ananatis AJ13355]
          Length = 154

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S ++
Sbjct: 8   LEQKLTELVSAPVEALGYELVGIEFVRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVM 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I     
Sbjct: 67  DVEDPITVPYHLEVSSPGLDRPLFTAEHYARFTGDEVSLVLRMAVQNRRKWQGIIKSVEG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E   E          +  ++  A L+ 
Sbjct: 127 EMITVNVEGNDEV--------FALSNIQKANLVP 152


>gi|251791037|ref|YP_003005758.1| hypothetical protein Dd1591_3467 [Dickeya zeae Ech1591]
 gi|247539658|gb|ACT08279.1| protein of unknown function DUF150 [Dickeya zeae Ech1591]
          Length = 154

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 8   LEQKLTEMISAPVEALGYELVGIEFIRGRQSTLRIYIDSED-GITVDDCADVSHQVSAVL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+   + +  + G  V+  + ++  +++K  G I     
Sbjct: 67  DVEDPISVAYNLEVSSPGLDRPLFTAAHYAHFVGEEVSLVLRMAVQNRRKWQGIIKSVEG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 127 EMITVTVDGKEEV--------FALSNIQKANLVP 152


>gi|293393155|ref|ZP_06637470.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291424301|gb|EFE97515.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 187

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++  +  + + DC ++S  +S +L
Sbjct: 41  LEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDS-ENGINVDDCADVSHQVSAVL 99

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ +   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 100 DVEDPVTVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGIIKSVEG 159

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 160 EMITVTVDGKDEV--------FALSNIQKANLVP 185


>gi|156935696|ref|YP_001439612.1| hypothetical protein ESA_03563 [Cronobacter sakazakii ATCC BAA-894]
 gi|259585769|sp|A7MQE3|RIMP_ENTS8 RecName: Full=Ribosome maturation factor rimP
 gi|156533950|gb|ABU78776.1| hypothetical protein ESA_03563 [Cronobacter sakazakii ATCC BAA-894]
          Length = 160

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 14  LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GITVDDCADVSHQVSSVL 72

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 73  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARYTGEEVTLVLRMAVQNRRKWQGIIKAVDG 132

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 133 EMITVAVDGKDEV--------FALSNIQRANLVP 158


>gi|271499172|ref|YP_003332197.1| hypothetical protein Dd586_0598 [Dickeya dadantii Ech586]
 gi|270342727|gb|ACZ75492.1| protein of unknown function DUF150 [Dickeya dadantii Ech586]
          Length = 152

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +D  +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTEMISAPVEALGYELVGIEFIRGRQSTLRIYIDSED-GITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+   + +  + G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPISVAYNLEVSSPGLDRPLFTAAHYAHFVGEEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E + E          +  ++  A L+ 
Sbjct: 120 KSVEGEMITVTVEGKDEV--------FALSNIQKANLVP 150


>gi|163796765|ref|ZP_02190723.1| hypothetical protein BAL199_13523 [alpha proteobacterium BAL199]
 gi|159178019|gb|EDP62566.1| hypothetical protein BAL199_13523 [alpha proteobacterium BAL199]
          Length = 179

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 7/170 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPIL 80
           A  I S+I P IE M +  V++ +   +   LQI  ER D   M + DC E+S++IS IL
Sbjct: 11  ARRIESIIGPSIEAMGYALVRVMITGGRRPTLQIMAERADGSGMNVDDCAEISRSISAIL 70

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I G Y LEVSSPGIDRP+ R  DF R+ G     ++      +++  G+++G  +
Sbjct: 71  DVEDPITGEYTLEVSSPGIDRPLTRLDDFRRFAGFEARIDMAELIEGRKRFGGRLIGVDD 130

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
               L +   G ++      A+ F+ +  A+L++TDEL+ AS       A
Sbjct: 131 ADRVLLETAPGVRE------ALPFEGIARAKLVLTDELVAASAPAGREGA 174


>gi|326402395|ref|YP_004282476.1| hypothetical protein ACMV_02470 [Acidiphilium multivorum AIU301]
 gi|325049256|dbj|BAJ79594.1| hypothetical protein ACMV_02470 [Acidiphilium multivorum AIU301]
          Length = 174

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 96/167 (57%), Gaps = 9/167 (5%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAI 76
             GL G I+ +I P +E + +  V+++++ ++   +QI  +R D   ++L DCE +S  +
Sbjct: 8   HTGLEGRIAELIAPGLESIGYELVRVAIMGKQTPTVQIMADRADQTPLSLDDCERISHLV 67

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKI 135
           S +LDV++ I   + LEVSS GIDRP+ R  D+ R+ GH+   ++ + +   +++L G +
Sbjct: 68  SAVLDVDDPISSAWTLEVSSAGIDRPLTRVKDWNRYAGHLARIDLDVPTASGRKRLTGTV 127

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           +G  E    ++ +       +   + +    +  A+L++T+EL++A+
Sbjct: 128 LGADEAQARVKLD-------SGETVDLPHAHIRRAKLVLTEELIKAT 167


>gi|91212592|ref|YP_542578.1| hypothetical protein UTI89_C3601 [Escherichia coli UTI89]
 gi|170680823|ref|YP_001745444.1| hypothetical protein EcSMS35_3466 [Escherichia coli SMS-3-5]
 gi|187775784|ref|ZP_02798170.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188024835|ref|ZP_02774257.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189010333|ref|ZP_02806320.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189401946|ref|ZP_02779158.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189403296|ref|ZP_02794595.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189404085|ref|ZP_02787144.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189404788|ref|ZP_02811062.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189405548|ref|ZP_02822778.2| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|191168030|ref|ZP_03029830.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|193062091|ref|ZP_03043187.1| conserved hypothetical protein [Escherichia coli E22]
 gi|193067407|ref|ZP_03048375.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194430231|ref|ZP_03062729.1| conserved hypothetical protein [Escherichia coli B171]
 gi|194438776|ref|ZP_03070862.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|208808473|ref|ZP_03250810.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812353|ref|ZP_03253682.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820794|ref|ZP_03261114.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400717|ref|YP_002272641.1| hypothetical protein ECH74115_4491 [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327331|ref|ZP_03443414.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|237706077|ref|ZP_04536558.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|293406781|ref|ZP_06650707.1| hypothetical protein ECGG_02091 [Escherichia coli FVEC1412]
 gi|298382522|ref|ZP_06992119.1| hypothetical protein ECFG_02283 [Escherichia coli FVEC1302]
 gi|331643870|ref|ZP_08345001.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331648971|ref|ZP_08350059.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331654776|ref|ZP_08355776.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331674708|ref|ZP_08375467.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|331679251|ref|ZP_08379923.1| putative cytoplasmic protein [Escherichia coli H591]
 gi|332279999|ref|ZP_08392412.1| conserved hypothetical protein [Shigella sp. D9]
 gi|26110182|gb|AAN82368.1|AE016767_128 Hypothetical protein yhbC [Escherichia coli CFT073]
 gi|91074166|gb|ABE09047.1| conserved hypothetical protein [Escherichia coli UTI89]
 gi|170518541|gb|ACB16719.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
 gi|187770840|gb|EDU34684.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016402|gb|EDU54524.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001090|gb|EDU70076.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358736|gb|EDU77155.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361416|gb|EDU79835.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189367607|gb|EDU86023.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374130|gb|EDU92546.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189379725|gb|EDU98141.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|190901899|gb|EDV61648.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|192932311|gb|EDV84909.1| conserved hypothetical protein [Escherichia coli E22]
 gi|192959364|gb|EDV89799.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194411732|gb|EDX28056.1| conserved hypothetical protein [Escherichia coli B171]
 gi|194422248|gb|EDX38249.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|208728274|gb|EDZ77875.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733630|gb|EDZ82317.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740917|gb|EDZ88599.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209162117|gb|ACI39550.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217319698|gb|EEC28123.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|226899117|gb|EEH85376.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|291426787|gb|EFE99819.1| hypothetical protein ECGG_02091 [Escherichia coli FVEC1412]
 gi|298277662|gb|EFI19178.1| hypothetical protein ECFG_02283 [Escherichia coli FVEC1302]
 gi|323376934|gb|ADX49202.1| protein of unknown function DUF150 [Escherichia coli KO11]
 gi|331037341|gb|EGI09565.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331042718|gb|EGI14860.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331048158|gb|EGI20235.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331068147|gb|EGI39543.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|331073316|gb|EGI44639.1| putative cytoplasmic protein [Escherichia coli H591]
 gi|332102351|gb|EGJ05697.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 154

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 8   LEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 67  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 127 EMITVTVEGKDEV--------FALSNIQKANLVP 152


>gi|283788202|ref|YP_003368067.1| hypothetical protein ROD_46621 [Citrobacter rodentium ICC168]
 gi|282951656|emb|CBG91356.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
          Length = 154

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S ++
Sbjct: 8   LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVM 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I     
Sbjct: 67  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFLGEEVSLVLRMAVQNRRKWQGVIKAVDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 127 EMITVAVEGKDEV--------FALSNIQKANLVP 152


>gi|191172206|ref|ZP_03033749.1| conserved hypothetical protein [Escherichia coli F11]
 gi|194433780|ref|ZP_03066055.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|227887893|ref|ZP_04005698.1| UPF0090 protein yhbC [Escherichia coli 83972]
 gi|238902274|ref|YP_002928070.1| hypothetical protein BWG_2874 [Escherichia coli BW2952]
 gi|291284546|ref|YP_003501364.1| hypothetical protein G2583_3895 [Escherichia coli O55:H7 str.
           CB9615]
 gi|331659459|ref|ZP_08360401.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331664784|ref|ZP_08365689.1| putative cytoplasmic protein [Escherichia coli TA143]
 gi|331669999|ref|ZP_08370844.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331684819|ref|ZP_08385411.1| putative cytoplasmic protein [Escherichia coli H299]
 gi|67476527|sp|P0A8A9|RIMP_ECOL6 RecName: Full=Ribosome maturation factor rimP
 gi|67476528|sp|P0A8B0|RIMP_ECO57 RecName: Full=Ribosome maturation factor rimP
 gi|67476531|sp|P0A8B1|RIMP_SHIFL RecName: Full=Ribosome maturation factor rimP
 gi|91208385|sp|Q32BG3|RIMP_SHIDS RecName: Full=Ribosome maturation factor rimP
 gi|91208386|sp|Q3YX71|RIMP_SHISS RecName: Full=Ribosome maturation factor rimP
 gi|166979883|sp|A1AG75|RIMP_ECOK1 RecName: Full=Ribosome maturation factor rimP
 gi|259585759|sp|C4ZSR1|RIMP_ECOBW RecName: Full=Ribosome maturation factor rimP
 gi|259585820|sp|B6I1P5|RIMP_ECOSE RecName: Full=Ribosome maturation factor rimP
 gi|259585821|sp|B1LFS2|RIMP_ECOSM RecName: Full=Ribosome maturation factor rimP
 gi|259585822|sp|Q1R6G7|RIMP_ECOUT RecName: Full=Ribosome maturation factor rimP
 gi|259585823|sp|B5YS60|RIMP_ECO5E RecName: Full=Ribosome maturation factor rimP
 gi|259585825|sp|B1IQV1|RIMP_ECOLC RecName: Full=Ribosome maturation factor rimP
 gi|259585826|sp|B7UJ65|RIMP_ECO27 RecName: Full=Ribosome maturation factor rimP
 gi|12517781|gb|AAG58306.1|AE005545_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|606110|gb|AAA57973.1| gtg start; differences from database entry [Escherichia coli str.
           K-12 substr. MG1655]
 gi|13363524|dbj|BAB37474.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|30042769|gb|AAP18492.1| hypothetical protein S3428 [Shigella flexneri 2a str. 2457T]
 gi|56383831|gb|AAN44678.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|73857184|gb|AAZ89891.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81242632|gb|ABB63342.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|115514590|gb|ABJ02665.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|190907516|gb|EDV67112.1| conserved hypothetical protein [Escherichia coli F11]
 gi|194418043|gb|EDX34137.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|209758318|gb|ACI77471.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758320|gb|ACI77472.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758322|gb|ACI77473.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758324|gb|ACI77474.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|209758326|gb|ACI77475.1| hypothetical protein ECs4051 [Escherichia coli]
 gi|222034889|emb|CAP77632.1| UPF0090 protein yhbC [Escherichia coli LF82]
 gi|227835289|gb|EEJ45755.1| UPF0090 protein yhbC [Escherichia coli 83972]
 gi|238860383|gb|ACR62381.1| conserved protein [Escherichia coli BW2952]
 gi|281602554|gb|ADA75538.1| hypothetical protein SFxv_3524 [Shigella flexneri 2002017]
 gi|290764419|gb|ADD58380.1| hypothetical protein G2583_3895 [Escherichia coli O55:H7 str.
           CB9615]
 gi|323936134|gb|EGB32428.1| yhbC protein [Escherichia coli E1520]
 gi|323941728|gb|EGB37907.1| yhbC [Escherichia coli E482]
 gi|323946974|gb|EGB42990.1| yhbC protein [Escherichia coli H120]
 gi|323951310|gb|EGB47185.1| yhbC [Escherichia coli H252]
 gi|323957681|gb|EGB53395.1| yhbC [Escherichia coli H263]
 gi|323961058|gb|EGB56673.1| yhbC [Escherichia coli H489]
 gi|323966352|gb|EGB61786.1| yhbC [Escherichia coli M863]
 gi|323970265|gb|EGB65536.1| yhbC [Escherichia coli TA007]
 gi|323979111|gb|EGB74189.1| yhbC [Escherichia coli TW10509]
 gi|324115224|gb|EGC09188.1| yhbC [Escherichia fergusonii B253]
 gi|324119537|gb|EGC13419.1| yhbC [Escherichia coli E1167]
 gi|325498753|gb|EGC96612.1| hypothetical protein ECD227_2850 [Escherichia fergusonii ECD227]
 gi|331054041|gb|EGI26070.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331058032|gb|EGI30014.1| putative cytoplasmic protein [Escherichia coli TA143]
 gi|331062912|gb|EGI34826.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331078434|gb|EGI49640.1| putative cytoplasmic protein [Escherichia coli H299]
          Length = 152

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLVP 150


>gi|91208384|sp|Q31W49|RIMP_SHIBS RecName: Full=Ribosome maturation factor rimP
 gi|81247001|gb|ABB67709.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 152

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V I  +      L+I+++ +D  + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSED-GINVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVI 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLVP 150


>gi|192362188|ref|YP_001980957.1| BCR family protein [Cellvibrio japonicus Ueda107]
 gi|190688353|gb|ACE86031.1| Uncharacterized BCR, YhbC family [Cellvibrio japonicus Ueda107]
          Length = 196

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 11/162 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ +I PV+E +      +  L +     L+IF++     ++L DCE +S+ IS +L
Sbjct: 37  QERLTDLIVPVVESLGCELWGLEYLTQGRYTTLRIFIDGP-QGVSLDDCERVSRQISAVL 95

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I+G Y LEVSSPG+DRP+  ++ + R+ G  V   + ++   +++  G I    E
Sbjct: 96  DVEDPIDGEYTLEVSSPGLDRPLYTEAQYARYVGETVNLRLRIAVEGRRRFKGVISAIEE 155

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT-DELLRA 181
               L+ +           + +  +++    L+   D++LR 
Sbjct: 156 GALLLQFDN--------QTVRLPIETIDKGNLVPRYDDILRE 189


>gi|296533458|ref|ZP_06896040.1| protein of hypothetical function DUF150 [Roseomonas cervicalis ATCC
           49957]
 gi|296266213|gb|EFH12256.1| protein of hypothetical function DUF150 [Roseomonas cervicalis ATCC
           49957]
          Length = 195

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 8/164 (4%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCE 70
           E  +  + GL   I++ IQP +  M +  V++ +  ++   +Q+  +R DG  + + DCE
Sbjct: 4   EDDLPQNEGLEARIAAAIQPTLTAMGYEIVRVQIHGKQTPTVQVMADRADGALIGVADCE 63

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S A+  +LDV++   G + LEVSSPGIDRP+ R  D+LR+ GH+   E+ +    +++
Sbjct: 64  AISHAVGAVLDVDDPFSGEWNLEVSSPGIDRPLTRTKDWLRFTGHLAIAEMSIPFEGRRR 123

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             G I+G  E    L  E          + A+    +  A+L++
Sbjct: 124 FRGTILGADEASVRLRLE-------EGTEYALPRHDIRRAKLVL 160


>gi|209966174|ref|YP_002299089.1| hypothetical protein RC1_2909 [Rhodospirillum centenum SW]
 gi|259586184|sp|B6IVF3|RIMP_RHOCS RecName: Full=Ribosome maturation factor rimP
 gi|209959640|gb|ACJ00277.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 252

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 20/181 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
           M     I  +I+P +E M +  V++ L   +   LQI  ER DG  MT+ DC ++S+A+S
Sbjct: 1   MEAVERIGRIIEPSVEAMGYELVRVQLSGGQRPTLQIMAERSDGAAMTVEDCADISRAVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ + G Y LEVSSPGIDRP+ R  DF R+ G     E       +++  G + G
Sbjct: 61  ALLDVEDPLPGAYTLEVSSPGIDRPLTRLKDFERFAGFEARLETKAPVDGRKRFRGFLAG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQ-------------------IAISFDSLLSARLIVTDEL 178
             +    L      +                          + I F  +L A+L +TDEL
Sbjct: 121 IEDDAVRLALPVEKKARKGAKAAPTRDAADAGEAGDAEATLVVIPFGLVLKAKLELTDEL 180

Query: 179 L 179
           L
Sbjct: 181 L 181


>gi|205354192|ref|YP_002227993.1| hypothetical protein SG3179 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|259586192|sp|B5REN8|RIMP_SALG2 RecName: Full=Ribosome maturation factor rimP
 gi|205273973|emb|CAR38978.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326629313|gb|EGE35656.1| Ribosome maturation factor rimP [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 154

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 8   LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I     
Sbjct: 67  DVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 127 EMITVTVEGKDEV--------FALSNIQKANLVP 152


>gi|117618499|ref|YP_857796.1| 15 kDa protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117559906|gb|ABK36854.1| 15 kDa protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 175

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 79/163 (48%), Gaps = 10/163 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEEL 72
           R      L   ++ +++  +  + F    I  +   K+  L+++++  +  +++ +C E+
Sbjct: 20  RRVTLATLEQRLTDLLEAPVVALGFELWGIEFIRAGKHSTLRVYIDG-EHGVSVENCAEV 78

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S  +  I+DVE+ I   Y LEVSSPG+DRP+ + + F ++ G   A  + +++ +++K  
Sbjct: 79  SHQVGAIMDVEDPITEEYYLEVSSPGLDRPLFKVAQFEKYVGQEAAVTLRMATNNRRKFK 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           G I         L  + + E         ++F ++  A ++  
Sbjct: 139 GVIKAVQGDMITLTVDGKDEV--------LAFTNIQKANIVPN 173


>gi|54295604|ref|YP_128019.1| hypothetical protein lpl2691 [Legionella pneumophila str. Lens]
 gi|53755436|emb|CAH16932.1| hypothetical protein lpl2691 [Legionella pneumophila str. Lens]
          Length = 152

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 10/159 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELS 73
           +F    +  D+  +++P+I+ M +         + K+ LL+I++++ D  + + DC+E+S
Sbjct: 1   MFIHTMINDDLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPD-GIGIDDCQEVS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +S +LDVE+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G
Sbjct: 60  KQVSAMLDVEDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            I+  S     L+     +         I   +++ A L
Sbjct: 120 IIVSASGDTIVLDINNEHQ--------EILLSNIVKANL 150


>gi|258404631|ref|YP_003197373.1| hypothetical protein Dret_0498 [Desulfohalobium retbaense DSM 5692]
 gi|257796858|gb|ACV67795.1| protein of unknown function DUF150 [Desulfohalobium retbaense DSM
           5692]
          Length = 157

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 9/160 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
               L   +S +I+P+          + +   +  +L+++V+  +  +++  C  LS+ I
Sbjct: 1   MHEKLYERLSELIKPLAASCGLDVWGMEIPASRGGVLRVYVDSPN-GVSIDQCATLSRHI 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LDVE+ + G Y LEVSSPG++RP    S    + G  VA ++      ++K  G ++
Sbjct: 60  SVTLDVEDPLPGPYTLEVSSPGLERPFFTVSQLPPYIGQPVALKLQAPMQGRKKWRGVLI 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
                   L+ +         ++   +++ +  ARL+  +
Sbjct: 120 EAEGDHLTLDVDG--------VEHVFAWEDVEKARLVFQE 151


>gi|89109935|ref|AP_003715.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|110643411|ref|YP_671141.1| hypothetical protein ECP_3258 [Escherichia coli 536]
 gi|110807039|ref|YP_690559.1| hypothetical protein SFV_3200 [Shigella flexneri 5 str. 8401]
 gi|157159426|ref|YP_001464647.1| hypothetical protein EcE24377A_3655 [Escherichia coli E24377A]
 gi|157162655|ref|YP_001459973.1| hypothetical protein EcHS_A3362 [Escherichia coli HS]
 gi|161367518|ref|NP_289746.2| hypothetical protein Z4531 [Escherichia coli O157:H7 EDL933]
 gi|161485816|ref|NP_708971.3| hypothetical protein SF3211 [Shigella flexneri 2a str. 301]
 gi|161486109|ref|NP_755794.2| hypothetical protein c3927 [Escherichia coli CFT073]
 gi|161486428|ref|NP_838681.2| hypothetical protein S3428 [Shigella flexneri 2a str. 2457T]
 gi|161950037|ref|YP_404833.2| hypothetical protein SDY_3349 [Shigella dysenteriae Sd197]
 gi|161986442|ref|YP_312126.2| hypothetical protein SSON_3316 [Shigella sonnei Ss046]
 gi|162139721|ref|NP_312078.3| hypothetical protein ECs4051 [Escherichia coli O157:H7 str. Sakai]
 gi|170082707|ref|YP_001732027.1| hypothetical protein ECDH10B_3344 [Escherichia coli str. K-12
           substr. DH10B]
 gi|187733192|ref|YP_001881913.1| hypothetical protein SbBS512_E3601 [Shigella boydii CDC 3083-94]
 gi|188492035|ref|ZP_02999305.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|195938390|ref|ZP_03083772.1| hypothetical protein EscherichcoliO157_18476 [Escherichia coli
           O157:H7 str. EC4024]
 gi|218550455|ref|YP_002384246.1| hypothetical protein EFER_3149 [Escherichia fergusonii ATCC 35469]
 gi|218555742|ref|YP_002388655.1| hypothetical protein ECIAI1_3320 [Escherichia coli IAI1]
 gi|218560242|ref|YP_002393155.1| hypothetical protein ECS88_3554 [Escherichia coli S88]
 gi|218691462|ref|YP_002399674.1| hypothetical protein ECED1_3830 [Escherichia coli ED1a]
 gi|218696877|ref|YP_002404544.1| hypothetical protein EC55989_3590 [Escherichia coli 55989]
 gi|218701941|ref|YP_002409570.1| hypothetical protein ECIAI39_3667 [Escherichia coli IAI39]
 gi|218706792|ref|YP_002414311.1| hypothetical protein ECUMN_3652 [Escherichia coli UMN026]
 gi|226524751|ref|NP_417639.6| ribosome maturation factor for 30S subunits [Escherichia coli str.
           K-12 substr. MG1655]
 gi|229597230|ref|YP_001723532.2| hypothetical protein EcolC_0528 [Escherichia coli ATCC 8739]
 gi|229775958|ref|YP_858789.2| hypothetical protein APECO1_3260 [Escherichia coli APEC O1]
 gi|254163114|ref|YP_003046222.1| hypothetical protein ECB_03037 [Escherichia coli B str. REL606]
 gi|254795121|ref|YP_003079958.1| hypothetical protein ECSP_4145 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018910|ref|ZP_05432775.1| hypothetical protein ShiD9_08333 [Shigella sp. D9]
 gi|256024254|ref|ZP_05438119.1| hypothetical protein E4_12823 [Escherichia sp. 4_1_40B]
 gi|307313123|ref|ZP_07592749.1| protein of unknown function DUF150 [Escherichia coli W]
 gi|312968491|ref|ZP_07782700.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|123342478|sp|Q0T0B1|RIMP_SHIF8 RecName: Full=Ribosome maturation factor rimP
 gi|123343572|sp|Q0TCT9|RIMP_ECOL5 RecName: Full=Ribosome maturation factor rimP
 gi|259585755|sp|A7ZS68|RIMP_ECO24 RecName: Full=Ribosome maturation factor rimP
 gi|259585756|sp|B7NKN9|RIMP_ECO7I RecName: Full=Ribosome maturation factor rimP
 gi|259585757|sp|B7N0V5|RIMP_ECO81 RecName: Full=Ribosome maturation factor rimP
 gi|259585758|sp|B7M078|RIMP_ECO8A RecName: Full=Ribosome maturation factor rimP
 gi|259585760|sp|B1XGY2|RIMP_ECODH RecName: Full=Ribosome maturation factor rimP
 gi|259585761|sp|A8A4Y6|RIMP_ECOHS RecName: Full=Ribosome maturation factor rimP
 gi|259585764|sp|B7MB91|RIMP_ECO45 RecName: Full=Ribosome maturation factor rimP
 gi|259585765|sp|B7LHN5|RIMP_ECO55 RecName: Full=Ribosome maturation factor rimP
 gi|259585766|sp|B7NDF6|RIMP_ECOLU RecName: Full=Ribosome maturation factor rimP
 gi|259585770|sp|B7LR39|RIMP_ESCF3 RecName: Full=Ribosome maturation factor rimP
 gi|259586197|sp|B2U205|RIMP_SHIB3 RecName: Full=Ribosome maturation factor rimP
 gi|269849638|sp|P0A8A8|RIMP_ECOLI RecName: Full=Ribosome maturation factor rimP
 gi|85675966|dbj|BAE77216.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|110345003|gb|ABG71240.1| putative cytoplasmic protein [Escherichia coli 536]
 gi|110616587|gb|ABF05254.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|157068335|gb|ABV07590.1| conserved hypothetical protein [Escherichia coli HS]
 gi|157081456|gb|ABV21164.1| conserved hypothetical protein [Escherichia coli E24377A]
 gi|169890542|gb|ACB04249.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187430184|gb|ACD09458.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
 gi|188487234|gb|EDU62337.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|218353609|emb|CAU99801.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218357996|emb|CAQ90642.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
 gi|218362510|emb|CAR00134.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|218367011|emb|CAR04782.1| conserved hypothetical protein [Escherichia coli S88]
 gi|218371927|emb|CAR19783.1| conserved hypothetical protein [Escherichia coli IAI39]
 gi|218429026|emb|CAR09973.2| conserved hypothetical protein [Escherichia coli ED1a]
 gi|218433889|emb|CAR14806.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|226510978|gb|AAC76204.4| ribosome maturation factor for 30S subunits [Escherichia coli str.
           K-12 substr. MG1655]
 gi|242378715|emb|CAQ33505.1| ribosome maturation protein [Escherichia coli BL21(DE3)]
 gi|253975015|gb|ACT40686.1| hypothetical protein ECB_03037 [Escherichia coli B str. REL606]
 gi|253979171|gb|ACT44841.1| hypothetical protein ECD_03037 [Escherichia coli BL21(DE3)]
 gi|254594521|gb|ACT73882.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|294489705|gb|ADE88461.1| conserved hypothetical protein [Escherichia coli IHE3034]
 gi|306907034|gb|EFN37542.1| protein of unknown function DUF150 [Escherichia coli W]
 gi|307555266|gb|ADN48041.1| putative cytoplasmic protein [Escherichia coli ABU 83972]
 gi|309703598|emb|CBJ02938.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
 gi|312286709|gb|EFR14620.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|313648588|gb|EFS13030.1| hypothetical protein SF2457T_3054 [Shigella flexneri 2a str. 2457T]
 gi|315137758|dbj|BAJ44917.1| conserved protein [Escherichia coli DH1]
 gi|315617253|gb|EFU97862.1| conserved hypothetical protein [Escherichia coli 3431]
 gi|320181446|gb|EFW56364.1| hypothetical protein SGB_01316 [Shigella boydii ATCC 9905]
 gi|320194656|gb|EFW69286.1| hypothetical protein EcoM_03098 [Escherichia coli WV_060327]
 gi|323165128|gb|EFZ50918.1| hypothetical protein SS53G_4591 [Shigella sonnei 53G]
 gi|323189207|gb|EFZ74491.1| hypothetical protein ECRN5871_2808 [Escherichia coli RN587/1]
 gi|327255186|gb|EGE66786.1| hypothetical protein ECSTEC7V_5219 [Escherichia coli STEC_7v]
 gi|332086098|gb|EGI91260.1| hypothetical protein SB521682_3815 [Shigella boydii 5216-82]
 gi|332752330|gb|EGJ82720.1| hypothetical protein SF434370_3403 [Shigella flexneri 4343-70]
 gi|332752857|gb|EGJ83242.1| hypothetical protein SFK671_3816 [Shigella flexneri K-671]
 gi|333014971|gb|EGK34315.1| hypothetical protein SFK227_3827 [Shigella flexneri K-227]
          Length = 150

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|161984849|ref|YP_409537.2| hypothetical protein SBO_3212 [Shigella boydii Sb227]
          Length = 150

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +      L+I+++ +D  + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSED-GINVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|92115191|ref|YP_575119.1| hypothetical protein Csal_3076 [Chromohalobacter salexigens DSM
           3043]
 gi|122419134|sp|Q1QSY8|RIMP_CHRSD RecName: Full=Ribosome maturation factor rimP
 gi|91798281|gb|ABE60420.1| protein of unknown function DUF150 [Chromohalobacter salexigens DSM
           3043]
          Length = 153

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 10/157 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + ++I+PV+  M F    +    + K+  L I++E  D  +T+ DC  +S+ +S +L
Sbjct: 5   DAALKALIEPVVTAMGFELWGVDYLSQGKHSRLVIYIESAD-GVTVDDCAAVSRQVSGVL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I G YRLEVSSPG+DRP+     F  + G  V  ++      ++K  G++ G   
Sbjct: 64  DVEDPISGEYRLEVSSPGMDRPLFTLEQFASFKGSHVKVKLSTPFEGRRKFQGQLAGVEG 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
               L  +          +     +S+  AR++   +
Sbjct: 124 DEILLHLDG--------QEYCFPIESIEQARVVPQFD 152


>gi|194445687|ref|YP_002042545.1| hypothetical protein SNSL254_A3546 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|195873562|ref|ZP_02697406.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197248900|ref|YP_002148214.1| hypothetical protein SeAg_B3477 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264321|ref|ZP_03164395.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197301026|ref|ZP_02663047.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204928262|ref|ZP_03219462.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205357196|ref|ZP_02345817.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205357561|ref|ZP_02571247.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205359197|ref|ZP_02668054.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205360600|ref|ZP_02684674.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|259586187|sp|B5F6U0|RIMP_SALA4 RecName: Full=Ribosome maturation factor rimP
 gi|259586193|sp|B4TJ08|RIMP_SALHS RecName: Full=Ribosome maturation factor rimP
 gi|259586194|sp|B4T700|RIMP_SALNS RecName: Full=Ribosome maturation factor rimP
 gi|62129432|gb|AAX67135.1| Hypothetical protein yhbC [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194404350|gb|ACF64572.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194409325|gb|ACF69544.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|195633168|gb|EDX51582.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197212603|gb|ACH50000.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242576|gb|EDY25196.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197289178|gb|EDY28547.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204322584|gb|EDZ07781.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323251|gb|EDZ11090.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205331278|gb|EDZ18042.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205337765|gb|EDZ24529.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205348549|gb|EDZ35180.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 154

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 8   LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I     
Sbjct: 67  DVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 127 EMITVTVEGKDEV--------FALSNIQKANLVP 152


>gi|15599940|ref|NP_253434.1| hypothetical protein PA4746 [Pseudomonas aeruginosa PAO1]
 gi|107103845|ref|ZP_01367763.1| hypothetical protein PaerPA_01004916 [Pseudomonas aeruginosa PACS2]
 gi|116052893|ref|YP_793210.1| hypothetical protein PA14_62780 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152986446|ref|YP_001350788.1| hypothetical protein PSPA7_5464 [Pseudomonas aeruginosa PA7]
 gi|218893841|ref|YP_002442710.1| hypothetical protein PLES_51311 [Pseudomonas aeruginosa LESB58]
 gi|254238518|ref|ZP_04931841.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254244352|ref|ZP_04937674.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296391573|ref|ZP_06881048.1| hypothetical protein PaerPAb_25623 [Pseudomonas aeruginosa PAb1]
 gi|313109727|ref|ZP_07795667.1| hypothetical protein PA39016_002040024 [Pseudomonas aeruginosa
           39016]
 gi|34223065|sp|Q9HV53|RIMP_PSEAE RecName: Full=Ribosome maturation factor rimP
 gi|122257096|sp|Q02FS6|RIMP_PSEAB RecName: Full=Ribosome maturation factor rimP
 gi|167013034|sp|A6VCK3|RIMP_PSEA7 RecName: Full=Ribosome maturation factor rimP
 gi|226707668|sp|B7V1F8|RIMP_PSEA8 RecName: Full=Ribosome maturation factor rimP
 gi|9951008|gb|AAG08132.1|AE004888_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115588114|gb|ABJ14129.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170449|gb|EAZ55960.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126197730|gb|EAZ61793.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|150961604|gb|ABR83629.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
 gi|218774069|emb|CAW29885.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
 gi|310882169|gb|EFQ40763.1| hypothetical protein PA39016_002040024 [Pseudomonas aeruginosa
           39016]
          Length = 152

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + +    +    + ++ +L+++++R +  + + DCE +S+ +S ILD
Sbjct: 6   EQLQALLAPVVEALGYECWGVEFISQGRHSVLRVYIDRPE-GILIDDCEAVSRQVSGILD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I G Y LEVSSPG+DRP+     F +  G  V   +      ++   G + G  E 
Sbjct: 65  VEDPISGEYTLEVSSPGMDRPLFTLEQFAKHAGEQVKIRLRSPYEGRRNYQGILRGVEEQ 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
              +  +          +  +  DS+  A +I   +
Sbjct: 125 DVVVLVDD--------HEYLLPIDSIDKANIIPRFD 152


>gi|259585827|sp|A8AQ61|RIMP_CITK8 RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYARFLGEEVTLVLRMAVQNRRKWQGVI 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLVP 150


>gi|259585819|sp|B2VGS4|RIMP_ERWT9 RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  
Sbjct: 1   MGLSTLEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSED-GINVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYARFTGEEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E   E          +  ++  A L+ 
Sbjct: 120 KSVEGEMITVAVEGNDEV--------FALSNIQKANLVP 150


>gi|308189111|ref|YP_003933242.1| UPF0090 protein yhbC [Pantoea vagans C9-1]
 gi|308059621|gb|ADO11793.1| UPF0090 protein yhbC [Pantoea vagans C9-1]
          Length = 150

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + +  V I  +  +  +L+I+++ +D  + + DC ++S  +S ++
Sbjct: 4   LEQKLTELVSAPVEALGYELVGIEFVRSRTSILRIYIDSED-GINVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPITVPYNLEVSSPGLDRPLFTAEHYTRFMGEEVSLVLRMAVQNRRKWQGTIKSVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E   E          +  ++  A L+ 
Sbjct: 123 EMITVHVEGSDEV--------FALSNIQKANLVP 148


>gi|54040273|sp|P67219|RIMP_SALTI RecName: Full=Ribosome maturation factor rimP
 gi|54042668|sp|P67218|RIMP_SALTY RecName: Full=Ribosome maturation factor rimP
 gi|91208382|sp|Q57JH7|RIMP_SALCH RecName: Full=Ribosome maturation factor rimP
 gi|91208383|sp|Q5PLA8|RIMP_SALPA RecName: Full=Ribosome maturation factor rimP
 gi|259586212|sp|A9N734|RIMP_SALPB RecName: Full=Ribosome maturation factor rimP
 gi|259586213|sp|C0PZ56|RIMP_SALPC RecName: Full=Ribosome maturation factor rimP
 gi|259586214|sp|B5BGJ7|RIMP_SALPK RecName: Full=Ribosome maturation factor rimP
 gi|259586216|sp|B5QZW0|RIMP_SALEP RecName: Full=Ribosome maturation factor rimP
 gi|259586218|sp|A9MP34|RIMP_SALAR RecName: Full=Ribosome maturation factor rimP
 gi|323131648|gb|ADX19078.1| Ribosome maturation factor rimP [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 152

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLVP 150


>gi|54298758|ref|YP_125127.1| hypothetical protein lpp2822 [Legionella pneumophila str. Paris]
 gi|53752543|emb|CAH13975.1| hypothetical protein lpp2822 [Legionella pneumophila str. Paris]
          Length = 152

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 10/159 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELS 73
           +F    +  D+  +++P+I+ M +         + K+ LL+I++++ D  + + DC+E+S
Sbjct: 1   MFIHTMINDDLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPD-GIGIDDCQEVS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +S +LDVE+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G
Sbjct: 60  KQVSAMLDVEDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            I+  SE    L+     +         I   +++ A L
Sbjct: 120 IIVSASEDTIVLDINNEHQ--------EILLSNIVKANL 150


>gi|170765477|ref|ZP_02900288.1| conserved hypothetical protein [Escherichia albertii TW07627]
 gi|170124623|gb|EDS93554.1| conserved hypothetical protein [Escherichia albertii TW07627]
          Length = 150

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G      + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEATLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|146283632|ref|YP_001173785.1| hypothetical protein PST_3312 [Pseudomonas stutzeri A1501]
 gi|145571837|gb|ABP80943.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 182

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 11/174 (6%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGN 63
           HF   ++         L   + +++ PV+E + ++   I    + ++ LL+++++  +  
Sbjct: 19  HFSFVQHARGTSMSSKLEQ-LQALLAPVVEALGYQCWGIEFISQGRHSLLRVYIDHAN-G 76

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + + DCE++S+ +S +LDVE+ I   Y LEVSSPG+DRP+     ++   G  V  ++  
Sbjct: 77  ILIDDCEKVSRQLSGVLDVEDPISVDYTLEVSSPGMDRPLFTIEQYVAHVGDQVKIKLRS 136

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
               ++   G + G  E    +  +          +  +  D +  A +I   +
Sbjct: 137 PFEGRRNFQGLLRGVEEQDVVVLVDD--------HEYLLPIDMIDKANIIPRFD 182


>gi|262393380|ref|YP_003285234.1| hypothetical protein VEA_002607 [Vibrio sp. Ex25]
 gi|262336974|gb|ACY50769.1| UPF0090 domain-containing protein [Vibrio sp. Ex25]
          Length = 151

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 79/157 (50%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E   +  V +  +    +  L+I+++  +  + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEASGYELVGLEFIRAGAHSTLRIYIDH-ENGINVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 VDGETVTITVDGQQE--------EFALSNISKANLIP 149


>gi|307129383|ref|YP_003881399.1| hypothetical protein Dda3937_02343 [Dickeya dadantii 3937]
 gi|306526912|gb|ADM96842.1| conserved protein [Dickeya dadantii 3937]
          Length = 150

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMISAPVEALGYELVGIEFIRGRQSTLRIYIDSED-GITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPISVAYNLEVSSPGLERPLFTAAHYERFAGEEVSLVLRMAVQNRRKWQGIIKSVEG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|238760243|ref|ZP_04621388.1| hypothetical protein yaldo0001_39490 [Yersinia aldovae ATCC 35236]
 gi|238701566|gb|EEP94138.1| hypothetical protein yaldo0001_39490 [Yersinia aldovae ATCC 35236]
          Length = 152

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ DD  +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDD-GITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGENVTLVLRMAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  + + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVDGKDEV--------FALSNIQKANLVP 150


>gi|167401220|ref|ZP_02306720.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|259645220|sp|A7FMS4|RIMP_YERP3 RecName: Full=Ribosome maturation factor rimP
 gi|21957404|gb|AAM84274.1|AE013671_1 hypothetical protein y0686 [Yersinia pestis KIM 10]
 gi|45435296|gb|AAS60855.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|152961108|gb|ABS48569.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           31758]
 gi|167049245|gb|EDR60653.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
          Length = 154

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ DD  +T+  C ++S  +S +L
Sbjct: 8   LEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDD-GITVDACADVSHQVSAVL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I     
Sbjct: 67  DVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 127 EMITVTVDGKDEV--------FALSNIQKANLVP 152


>gi|229593531|ref|YP_001456060.2| hypothetical protein CKO_04571 [Citrobacter koseri ATCC BAA-895]
          Length = 150

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYARFLGEEVTLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|161353583|ref|NP_462201.2| hypothetical protein STM3288 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161486781|ref|NP_806884.2| hypothetical protein t3206 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|161501916|ref|NP_457670.2| hypothetical protein STY3469 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|161936211|ref|YP_152295.2| hypothetical protein SPA3156 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|162139540|ref|YP_218216.2| hypothetical protein SC3229 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194470097|ref|ZP_03076081.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194735644|ref|YP_002116238.1| hypothetical protein SeSA_A3478 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|198245424|ref|YP_002217261.1| hypothetical protein SeD_A3645 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387280|ref|ZP_03213892.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205358508|ref|ZP_02656955.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205359739|ref|ZP_02831643.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|213052983|ref|ZP_03345861.1| hypothetical protein Salmoneentericaenterica_08732 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213425431|ref|ZP_03358181.1| hypothetical protein SentesTyphi_07043 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213581726|ref|ZP_03363552.1| hypothetical protein SentesTyph_11179 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213621933|ref|ZP_03374716.1| hypothetical protein SentesTyp_32176 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213645860|ref|ZP_03375913.1| hypothetical protein SentesTy_00020 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|228879515|ref|YP_001573258.2| hypothetical protein SARI_04336 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|229307088|ref|YP_001590259.2| hypothetical protein SPAB_04100 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|229597265|ref|YP_002047317.2| hypothetical protein SeHA_C3583 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|259586191|sp|B5FI15|RIMP_SALDC RecName: Full=Ribosome maturation factor rimP
 gi|259586195|sp|B4TWE0|RIMP_SALSV RecName: Full=Ribosome maturation factor rimP
 gi|194456461|gb|EDX45300.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711146|gb|ACF90367.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197939940|gb|ACH77273.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604378|gb|EDZ02923.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205333894|gb|EDZ20658.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205343499|gb|EDZ30263.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|267995485|gb|ACY90370.1| hypothetical protein STM14_3971 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|320087735|emb|CBY97499.1| UPF0090 protein yhbC [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|322716286|gb|EFZ07857.1| transcription elongation factor NusA [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|326625039|gb|EGE31384.1| phage shock protein A [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 150

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I     
Sbjct: 63  DVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|153997275|ref|ZP_02022375.1| hypothetical protein YPE_3717 [Yersinia pestis CA88-4125]
 gi|229839150|ref|ZP_04459309.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229896639|ref|ZP_04511806.1| conserved protein [Yersinia pestis Pestoides A]
 gi|229899714|ref|ZP_04514855.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229903876|ref|ZP_04518989.1| conserved protein [Yersinia pestis Nepal516]
 gi|238787592|ref|ZP_04631390.1| hypothetical protein yfred0001_21120 [Yersinia frederiksenii ATCC
           33641]
 gi|238793020|ref|ZP_04636649.1| hypothetical protein yinte0001_33150 [Yersinia intermedia ATCC
           29909]
 gi|34223130|sp|Q8ZBC0|RIMP_YERPE RecName: Full=Ribosome maturation factor rimP
 gi|81640534|sp|Q66F62|RIMP_YERPS RecName: Full=Ribosome maturation factor rimP
 gi|51588112|emb|CAH19718.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|115349123|emb|CAL22086.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149288912|gb|EDM38992.1| hypothetical protein YPE_3717 [Yersinia pestis CA88-4125]
 gi|229679646|gb|EEO75749.1| conserved protein [Yersinia pestis Nepal516]
 gi|229687206|gb|EEO79281.1| conserved protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229695516|gb|EEO85563.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700417|gb|EEO88449.1| conserved protein [Yersinia pestis Pestoides A]
 gi|238724379|gb|EEQ16021.1| hypothetical protein yfred0001_21120 [Yersinia frederiksenii ATCC
           33641]
 gi|238727620|gb|EEQ19145.1| hypothetical protein yinte0001_33150 [Yersinia intermedia ATCC
           29909]
 gi|320013701|gb|ADV97272.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 152

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ DD  +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDD-GITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  + + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVDGKDEV--------FALSNIQKANLVP 150


>gi|259907040|ref|YP_002647396.1| YhbC-like protein [Erwinia pyrifoliae Ep1/96]
 gi|292900767|ref|YP_003540136.1| hypothetical protein EAM_3073 [Erwinia amylovora ATCC 49946]
 gi|224962662|emb|CAX54117.1| YhbC-like protein [Erwinia pyrifoliae Ep1/96]
 gi|291200615|emb|CBJ47747.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|310766252|gb|ADP11202.1| YhbC-like protein [Erwinia sp. Ejp617]
          Length = 152

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  
Sbjct: 1   MGLSTLEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSED-GINVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYDRFTGEEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E   E          +  ++  A L+ 
Sbjct: 120 KSVEGEMITVAVEGNDEV--------FALSNIQKANLVP 150


>gi|311277857|ref|YP_003940088.1| hypothetical protein Entcl_0527 [Enterobacter cloacae SCF1]
 gi|308747052|gb|ADO46804.1| protein of unknown function DUF150 [Enterobacter cloacae SCF1]
          Length = 150

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S ++
Sbjct: 4   LEQKLTEMLTAPVEALGFELVGIEFVRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|329295929|ref|ZP_08253265.1| hypothetical protein Pstas_03447 [Plautia stali symbiont]
          Length = 150

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ ++  + + DC ++S  +S ++
Sbjct: 4   LEQKLTELISAPVEALGYELVGIEFIRGRTSTLRIYIDSEE-GINVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG DRP+     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGFDRPLFTAEHYARFAGEEVSLVLRMAVQNRRKWQGIIKSVEG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E   E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGNDEV--------FALSNIQKANLVP 148


>gi|260893512|ref|YP_003239609.1| protein of unknown function DUF150 [Ammonifex degensii KC4]
 gi|260865653|gb|ACX52759.1| protein of unknown function DUF150 [Ammonifex degensii KC4]
          Length = 161

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 10/161 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +     +   +S + +P+ E +    V +   +     +L++F+++    +TL DCE LS
Sbjct: 1   MATGEKVVEVVSRLAEPLAERLGLELVDVEYKKEGGRWVLRVFIDKP-SGVTLDDCEALS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+   LDVE+ I   Y LEVSSPG++RP+ + + F R+ G  V    +     +++  G
Sbjct: 60  EALGEALDVEDPIPHSYSLEVSSPGVERPLKKPAHFQRFVGREVRVSTLAPVEGQRRFTG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++   E G  LE + +        ++ + +  +  A L+ 
Sbjct: 120 VLLAADEEGIRLETDGK--------ELDLPYRLIAKANLVF 152


>gi|212709947|ref|ZP_03318075.1| hypothetical protein PROVALCAL_00997 [Providencia alcalifaciens DSM
           30120]
 gi|212687459|gb|EEB46987.1| hypothetical protein PROVALCAL_00997 [Providencia alcalifaciens DSM
           30120]
          Length = 183

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V +  +  +   L+IF++ ++  +T+ DC ++S  +S +L
Sbjct: 37  LEQKLTEMVSAPVEALGFEFVGLEFVRGRTSTLRIFIDSEE-GITVDDCADVSHQVSAVL 95

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LE+SSPG++RP+   + + R+ G  VA  + ++  ++++  G I     
Sbjct: 96  DVEDPISVIYNLEISSPGMERPLFTIAHYERFMGEEVALSLRIAMQNRRRWQGIIKAVDG 155

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 156 EMITVTVDGKDEV--------FALGNIQKANLVP 181


>gi|259585768|sp|A4WEY5|RIMP_ENT38 RecName: Full=Ribosome maturation factor rimP
 gi|145320118|gb|ABP62265.1| protein of unknown function DUF150 [Enterobacter sp. 638]
          Length = 160

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I+  +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 14  LEQKLTEMIKAPVEALGYELVGIEFIRSRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 72

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+ RPM     +  + G  VA  + ++  +++K  G I     
Sbjct: 73  DVEDPITVAYNLEVSSPGLHRPMFTAEHYTHYIGEEVAVVLRMAVQNRRKWQGVIKAVDG 132

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 133 EMITVTVEGKDEV--------FALSNIQKANLVP 158


>gi|290511547|ref|ZP_06550916.1| hypothetical protein HMPREF0485_03317 [Klebsiella sp. 1_1_55]
 gi|289776540|gb|EFD84539.1| hypothetical protein HMPREF0485_03317 [Klebsiella sp. 1_1_55]
          Length = 154

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S ++
Sbjct: 8   LEQKLTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVM 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I     
Sbjct: 67  DVEDPITVAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGIIKAVDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 127 EMITVTVEGKDEV--------FALSNIQKANLVP 152


>gi|28899232|ref|NP_798837.1| hypothetical protein VP2458 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838301|ref|ZP_01990968.1| protein YhbC [Vibrio parahaemolyticus AQ3810]
 gi|260362205|ref|ZP_05775189.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|260879073|ref|ZP_05891428.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|260897744|ref|ZP_05906240.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|260900800|ref|ZP_05909195.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|34223108|sp|Q87M00|RIMP_VIBPA RecName: Full=Ribosome maturation factor rimP
 gi|28807456|dbj|BAC60721.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748290|gb|EDM59149.1| protein YhbC [Vibrio parahaemolyticus AQ3810]
 gi|308088965|gb|EFO38660.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|308089555|gb|EFO39250.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|308108208|gb|EFO45748.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|308111471|gb|EFO49011.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|328474232|gb|EGF45037.1| ribosome maturation protein RimP [Vibrio parahaemolyticus 10329]
          Length = 151

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E   +  V +  +    +  L+I+++  +  + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEASGYELVGLEFIRAGAHSTLRIYIDH-ENGINVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  E + E          +  ++  A LI 
Sbjct: 121 VDGETVTVTVEGQQE--------EFALSNISKANLIP 149


>gi|288933402|ref|YP_003437461.1| hypothetical protein Kvar_0519 [Klebsiella variicola At-22]
 gi|288888131|gb|ADC56449.1| protein of unknown function DUF150 [Klebsiella variicola At-22]
          Length = 152

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S ++DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I
Sbjct: 60  VSAVMDVEDPITVAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVEGKDEV--------FALSNIQKANLVP 150


>gi|108806046|ref|YP_649962.1| hypothetical protein YPA_0048 [Yersinia pestis Antiqua]
 gi|108813402|ref|YP_649169.1| hypothetical protein YPN_3242 [Yersinia pestis Nepal516]
 gi|145600794|ref|YP_001164870.1| hypothetical protein YPDSF_3547 [Yersinia pestis Pestoides F]
 gi|161484876|ref|NP_668023.2| hypothetical protein y0686 [Yersinia pestis KIM 10]
 gi|161511440|ref|NP_991978.2| hypothetical protein YP_0585 [Yersinia pestis biovar Microtus str.
           91001]
 gi|161760591|ref|YP_069021.2| hypothetical protein YPTB0478 [Yersinia pseudotuberculosis IP
           32953]
 gi|162419022|ref|YP_001608284.1| hypothetical protein YpAngola_A3991 [Yersinia pestis Angola]
 gi|166010175|ref|ZP_02231073.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|167420580|ref|ZP_02312333.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423588|ref|ZP_02315341.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170025947|ref|YP_001722452.1| hypothetical protein YPK_3732 [Yersinia pseudotuberculosis YPIII]
 gi|186893839|ref|YP_001870951.1| hypothetical protein YPTS_0508 [Yersinia pseudotuberculosis PB1/+]
 gi|218930512|ref|YP_002348387.1| hypothetical protein YPO3498 [Yersinia pestis CO92]
 gi|229294897|ref|YP_001402552.2| hypothetical protein YpsIP31758_3598 [Yersinia pseudotuberculosis
           IP 31758]
 gi|270489134|ref|ZP_06206208.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294505369|ref|YP_003569431.1| hypothetical protein YPZ3_3260 [Yersinia pestis Z176003]
 gi|122383879|sp|Q1CC05|RIMP_YERPA RecName: Full=Ribosome maturation factor rimP
 gi|122384216|sp|Q1CEL1|RIMP_YERPN RecName: Full=Ribosome maturation factor rimP
 gi|259511439|sp|A4TRI5|RIMP_YERPP RecName: Full=Ribosome maturation factor rimP
 gi|259511440|sp|B1JLY2|RIMP_YERPY RecName: Full=Ribosome maturation factor rimP
 gi|259645221|sp|B2K2Q3|RIMP_YERPB RecName: Full=Ribosome maturation factor rimP
 gi|259645222|sp|A9R5A1|RIMP_YERPG RecName: Full=Ribosome maturation factor rimP
 gi|108777050|gb|ABG19569.1| hypothetical protein YPN_3242 [Yersinia pestis Nepal516]
 gi|108777959|gb|ABG12017.1| hypothetical protein YPA_0048 [Yersinia pestis Antiqua]
 gi|145212490|gb|ABP41897.1| hypothetical protein YPDSF_3547 [Yersinia pestis Pestoides F]
 gi|162351837|gb|ABX85785.1| conserved hypothetical protein [Yersinia pestis Angola]
 gi|165991082|gb|EDR43383.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166961386|gb|EDR57407.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167057758|gb|EDR67504.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169752481|gb|ACA69999.1| protein of unknown function DUF150 [Yersinia pseudotuberculosis
           YPIII]
 gi|186696865|gb|ACC87494.1| protein of unknown function DUF150 [Yersinia pseudotuberculosis
           PB1/+]
 gi|262363435|gb|ACY60156.1| hypothetical protein YPD4_3252 [Yersinia pestis D106004]
 gi|262367190|gb|ACY63747.1| hypothetical protein YPD8_3075 [Yersinia pestis D182038]
 gi|270337638|gb|EFA48415.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294355828|gb|ADE66169.1| hypothetical protein YPZ3_3260 [Yersinia pestis Z176003]
          Length = 150

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ DD  +T+  C ++S  +S +L
Sbjct: 4   LEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDD-GITVDACADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 123 EMITVTVDGKDEV--------FALSNIQKANLVP 148


>gi|259586205|sp|Q2NW25|RIMP_SODGM RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                L   ++ +I   +E + F  V I  +  +   L+I++   D  +T+ DC ++S  
Sbjct: 1   MALSTLEQKLTEMITAPVEALGFELVGIEFIRGRQSTLRIYI-NSDEGITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRP+   + + ++ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPISVAYSLEVSSPGLDRPLFTAAHYRQFIGSDVSVVLRIAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  + + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVDGKDEV--------FALQNIQKANLVP 150


>gi|292486835|ref|YP_003529705.1| hypothetical protein EAMY_0347 [Erwinia amylovora CFBP1430]
 gi|283476836|emb|CAY72674.1| UPF0090 protein yhbC [Erwinia pyrifoliae DSM 12163]
 gi|291552252|emb|CBA19289.1| UPF0090 protein yhbC [Erwinia amylovora CFBP1430]
 gi|312170903|emb|CBX79162.1| UPF0090 protein yhbC [Erwinia amylovora ATCC BAA-2158]
          Length = 150

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S ++
Sbjct: 4   LEQKLTELISAPVEALGYELVGIEFVRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYDRFTGEEVSLVLRMAVQNRRKWQGIIKSVEG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E   E          +  ++  A L+ 
Sbjct: 123 EMITVAVEGNDEV--------FALSNIQKANLVP 148


>gi|90409005|ref|ZP_01217135.1| hypothetical protein PCNPT3_10746 [Psychromonas sp. CNPT3]
 gi|90309890|gb|EAS38045.1| hypothetical protein PCNPT3_10746 [Psychromonas sp. CNPT3]
          Length = 152

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +  P +E++ +  V I      K+ +L+++++  +  + + DC  +S+ IS 
Sbjct: 3   SLEQRLTDMFTPSVEDLGYELVGIEYTRAGKHSILRVYID-QEAGILVDDCAAVSRQISA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ++DVE+ I   Y LEVSSPG++RP+   + +  + G  V  ++ +   ++++  G I   
Sbjct: 62  LMDVEDPITNEYTLEVSSPGLERPLFSATHYQAFVGSKVKIQLRMPIQNRRRWKGMIESV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +  +   E          +  ++  A ++ 
Sbjct: 122 EGEIISVNVDGTLE--------RFALSNIQKANIVP 149


>gi|269103409|ref|ZP_06156106.1| UPF0090 domain-containing protein [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163307|gb|EEZ41803.1| UPF0090 domain-containing protein [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 151

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++P +  + +  V +  +    +  L+IF+++ +  + + DC E+S+ +S
Sbjct: 2   TALETQLTEMLEPSVAALGYELVGLEFIRAGEHSTLRIFIDK-ENGINVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSLVLKMAMGNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  L  +   E          +  ++  A L+ 
Sbjct: 121 VDGELVTLNVDGNEEC--------FALSNISKANLVP 149


>gi|282600045|ref|ZP_05972807.2| hypothetical protein PROVRUST_06459 [Providencia rustigianii DSM
           4541]
 gi|282566854|gb|EFB72389.1| hypothetical protein PROVRUST_06459 [Providencia rustigianii DSM
           4541]
          Length = 185

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V +  +  +   L+IF++ ++  +T+ DC ++S  +S +L
Sbjct: 39  LEQKLTEMVSAPVEALGFEFVGLEFVRGRTSTLRIFIDSEE-GITVDDCADVSHQVSAVL 97

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + + R+ G  VA  + ++  ++++  G I     
Sbjct: 98  DVEDPISVIYNLEVSSPGMERPLFTIAHYERFMGEEVALTLRIAMQNRRRWQGIIKAVDG 157

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 158 EMITVTVDGKDEV--------FALGNIQKANLVP 183


>gi|238750124|ref|ZP_04611627.1| hypothetical protein yrohd0001_7050 [Yersinia rohdei ATCC 43380]
 gi|238761766|ref|ZP_04622740.1| hypothetical protein ykris0001_12910 [Yersinia kristensenii ATCC
           33638]
 gi|332160077|ref|YP_004296654.1| hypothetical protein YE105_C0453 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|167012934|sp|A1JIW7|RIMP_YERE8 RecName: Full=Ribosome maturation factor rimP
 gi|122087772|emb|CAL10558.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238699880|gb|EEP92623.1| hypothetical protein ykris0001_12910 [Yersinia kristensenii ATCC
           33638]
 gi|238711668|gb|EEQ03883.1| hypothetical protein yrohd0001_7050 [Yersinia rohdei ATCC 43380]
 gi|325664307|gb|ADZ40951.1| hypothetical protein YE105_C0453 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 152

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ DD  +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDD-GITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG++RPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLERPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  + + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVDGKDEV--------FALSNIQKANLVP 150


>gi|227357077|ref|ZP_03841447.1| YhbC family protein [Proteus mirabilis ATCC 29906]
 gi|227162769|gb|EEI47732.1| YhbC family protein [Proteus mirabilis ATCC 29906]
          Length = 170

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 80/154 (51%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +++++   +E + F  V +  +  +   L+I+++ ++  +T+ DC ++S  +S +L
Sbjct: 24  LEQKLTAMVSAPVEALGFEFVGLEFIRGRVSTLRIYIDSEE-GITVDDCADVSHQVSAVL 82

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I+  Y LE+SSPG++RP+   + + ++ G  VA  + ++  +++K  G I   + 
Sbjct: 83  DVEDPIQTFYNLEISSPGLERPLFTTTHYEQFIGEEVAVVLRIAMQNRRKWQGIIKSVAG 142

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 143 EMITVTVDGKDEV--------FALSNIQKANLVP 168


>gi|260596200|ref|YP_003208771.1| ribosome maturation protein RimP [Cronobacter turicensis z3032]
 gi|260215377|emb|CBA27399.1| UPF0090 protein yhbC [Cronobacter turicensis z3032]
          Length = 150

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ +   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPVTVAYNLEVSSPGLDRPLFTAEHYARYTGEEVTLVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 123 EMITVAVDGKDEV--------FALSNIQRANLVP 148


>gi|259585707|sp|Q0A795|RIMP_ALHEH RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 9/154 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + ++I P++  M +  V I         LL+I+++  D  +TL DCE  S+ IS +L
Sbjct: 5   EDTLYALIDPLLTGMGYELVGIEYGGPAGKRLLRIYIDSPD-GITLDDCETCSRQISAVL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I G Y LE+SSPG+DRP+ + SD+ R+ G  +   +      +++  G + G  +
Sbjct: 64  DVEDPIPGEYTLEISSPGLDRPIFKASDYDRFAGEQIKIRLSAPWEGRRRFKGVLAGLGD 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  +        +    ++ I  D +  ARLI+
Sbjct: 124 EGVRV-------VEAQGDEVQIPLDLIEKARLIL 150


>gi|254787151|ref|YP_003074580.1| hypothetical protein TERTU_3219 [Teredinibacter turnerae T7901]
 gi|259645124|sp|C5BPW1|RIMP_TERTT RecName: Full=Ribosome maturation factor rimP
 gi|237686402|gb|ACR13666.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
          Length = 152

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            +  +I PV+E +      +    + +  +L+IF+++    + + DCE++S+ +S +LDV
Sbjct: 7   QLEELIAPVVESLECELWGLEYSVQGRRSMLRIFIDKQPDGVLVEDCEKVSRQVSSVLDV 66

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G Y LEVSSPG+DRP+ + + F  + GH VA  + ++   ++K  G + G  +  
Sbjct: 67  EDPISGEYTLEVSSPGMDRPLFKLAHFELYVGHRVALRLRVAFEGRRKFQGLLKGIEDGE 126

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             LE          E +  + F+ +  A ++ 
Sbjct: 127 IVLEV--------GEEEYLLPFELIDKANVVP 150


>gi|323162864|gb|EFZ48699.1| hypothetical protein ECE128010_0824 [Escherichia coli E128010]
          Length = 150

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKCQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|269966858|ref|ZP_06180931.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269828525|gb|EEZ82786.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 151

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ ++   +    +  V +  +    +  L+I+++  +  + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLDAPVAASGYELVGLEFIRAGAHSTLRIYIDH-ENGINVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 VDGETVTITVDGQQE--------EFALSNISKANLIP 149


>gi|206577891|ref|YP_002236419.1| hypothetical protein KPK_0544 [Klebsiella pneumoniae 342]
 gi|229269511|ref|YP_001337240.2| hypothetical protein KPN_03578 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259585803|sp|B5XSX2|RIMP_KLEP3 RecName: Full=Ribosome maturation factor rimP
 gi|259585806|sp|A6TEI9|RIMP_KLEP7 RecName: Full=Ribosome maturation factor rimP
 gi|206566949|gb|ACI08725.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
          Length = 150

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S ++
Sbjct: 4   LEQKLTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVM 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|238896677|ref|YP_002921422.1| hypothetical protein KP1_4889 [Klebsiella pneumoniae NTUH-K2044]
 gi|238549004|dbj|BAH65355.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 154

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S ++
Sbjct: 8   LEQKLTEMLTAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVM 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSS G+DRPM     + R+ G  VA  + ++  +++K  G I     
Sbjct: 67  DVEDPITVAYNLEVSSLGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGIIKAVDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 127 EMITVTVEGKDEV--------FALSNIQKANLVP 152


>gi|94501386|ref|ZP_01307906.1| hypothetical protein RED65_04750 [Oceanobacter sp. RED65]
 gi|94426499|gb|EAT11487.1| hypothetical protein RED65_04750 [Oceanobacter sp. RED65]
          Length = 175

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 11/157 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  ++QPV+E M +    +  + + K+ LL+IF++  +  + + DC  +S+ +S ++
Sbjct: 24  DQQLVELLQPVVEAMGYEFWGLEYIAKGKDSLLRIFIDG-ENGVNVDDCAAVSRQVSGVM 82

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+     F R+ G  V  ++  +   ++K  GK++G  +
Sbjct: 83  DVEDPITSEYNLEVSSPGLDRPLFTLEHFERYVGEFVDIKLRYAFEGRRKFKGKLVGIED 142

Query: 141 -TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
                +  +          +  +  DS+  A LI  D
Sbjct: 143 GEDIVVHVDN--------HEYLLPIDSIDKANLIYRD 171


>gi|229576801|ref|YP_001004802.2| hypothetical protein YE0432 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318607363|emb|CBY28861.1| clustered with transcription termination protein NusA [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|330862030|emb|CBX72197.1| UPF0090 protein YE0432 [Yersinia enterocolitica W22703]
          Length = 150

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + +  V I  +  +   L+I+++ DD  +T+  C ++S  +S +L
Sbjct: 4   LEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDD-GITVDACADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RPM     + R+ G  V   + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLERPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 123 EMITVTVDGKDEV--------FALSNIQKANLVP 148


>gi|162382799|ref|YP_454055.2| hypothetical protein SG0375 [Sodalis glossinidius str. 'morsitans']
          Length = 150

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V I  +  +   L+I++   D  +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMITAPVEALGFELVGIEFIRGRQSTLRIYI-NSDEGITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+   + + ++ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEDPISVAYSLEVSSPGLDRPLFTAAHYRQFIGSDVSVVLRIAVQNRRKWQGIIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 123 EMITVTVDGKDEV--------FALQNIQKANLVP 148


>gi|317493624|ref|ZP_07952045.1| yhbC protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918567|gb|EFV39905.1| yhbC protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 152

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + F  V I  +   +  L+I+++ D+  + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMISAPVEALGFELVGIEFIRSHHSTLRIYIDSDE-GINVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     ++R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTADHYVRFMGEEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  + + E          +  ++  A L+ 
Sbjct: 120 KAVEGEMITVTVDGKDEV--------FALSNIQKANLVP 150


>gi|238755154|ref|ZP_04616500.1| hypothetical protein yruck0001_25670 [Yersinia ruckeri ATCC 29473]
 gi|238706601|gb|EEP98972.1| hypothetical protein yruck0001_25670 [Yersinia ruckeri ATCC 29473]
          Length = 152

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ +I   +E + +  V I  +  +   L+I+++ +D  +T+  C ++S  
Sbjct: 1   MGLSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSED-GITVDACADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPITVAYNLEVSSPGLDRPMFTAEHYARYLGETVILVLRMAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  + + E          +  ++  A L+ 
Sbjct: 120 KAVDGEMITVTVDGKDEV--------FALSNIQKANLVP 150


>gi|197335158|ref|YP_002155239.1| protein VV1_1694 [Vibrio fischeri MJ11]
 gi|226707621|sp|B5FA77|RIMP_VIBFM RecName: Full=Ribosome maturation factor rimP
 gi|197316648|gb|ACH66095.1| protein VV1_1694 [Vibrio fischeri MJ11]
          Length = 151

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +  + +  V +  +    +  L++F++  +  + + DC E S+ IS
Sbjct: 2   TGLERQLTEMLEAPVGALGYELVGLEFVRAGEHSTLRVFIDH-ENGIFVEDCAEASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + +   +++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +     +  +   E          +  ++  A L+ 
Sbjct: 121 VNGEIVTVTVDGNNE--------EFALSNISKANLVP 149


>gi|91208407|sp|Q5WT34|RIMP_LEGPL RecName: Full=Ribosome maturation factor rimP
          Length = 147

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  D+  +++P+I+ M +         + K+ LL+I++++ D  + + DC+E+S+ +S +
Sbjct: 2   INDDLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPD-GIGIDDCQEVSKQVSAM 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  S
Sbjct: 61  LDVEDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSAS 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                L+     +         I   +++ A L
Sbjct: 121 GDTIVLDINNEHQ--------EILLSNIVKANL 145


>gi|119944577|ref|YP_942257.1| hypothetical protein Ping_0815 [Psychromonas ingrahamii 37]
 gi|167016814|sp|A1ST43|RIMP_PSYIN RecName: Full=Ribosome maturation factor rimP
 gi|119863181|gb|ABM02658.1| hypothetical protein DUF150 [Psychromonas ingrahamii 37]
          Length = 153

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 80/156 (51%), Gaps = 10/156 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ ++ P +E++ +  V +  +   K+  L++++++D+  + + DC  +S+ +S 
Sbjct: 3   SLEERLTEMLAPSVEDLGYELVGVEYIRAGKHSTLRVYIDQDE-GILVDDCAAVSRQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           I+DVE+ I   Y LEVSSPG++RP+ +   +  + G  V  ++ +   ++++  G I+  
Sbjct: 62  IMDVEDPITNEYSLEVSSPGMNRPLFKAEHYQIFAGEEVKIQLRMPIQNRRRWKGVIVSA 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    L  E R E          S  ++  A ++ 
Sbjct: 122 EDEIICLNIEGREE--------RFSLSNIQKANIVP 149


>gi|254419012|ref|ZP_05032736.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
 gi|196185189|gb|EDX80165.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
          Length = 199

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERD-DGNMTLRDCEEL 72
           +         +  +I P+ E +    V++ L    K   LQI  ER  D ++++  C +L
Sbjct: 1   MRARTAQDRQLLELIDPIAESLGLEVVRVRLMTGSKRQRLQIMAERPSDHDISVEQCAKL 60

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+A+S + D  + I G Y LEVSSPGIDRP+ R  DF  + G     E       +++  
Sbjct: 61  SRAVSEVFDAADPIAGEYMLEVSSPGIDRPLTRPLDFDLFEGEEARLETDRMIEGRKRFK 120

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR--ASLNNYGSYA 190
           G + G  +    ++ +        +    I FD L  A+L++TD L++  A++       
Sbjct: 121 GVLAGYEDGNVLIDLDG------EDETALIPFDWLSDAKLVLTDALMKRGAAIRAARGEP 174


>gi|138894779|ref|YP_001125232.1| hypothetical protein GTNG_1113 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134266292|gb|ABO66487.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 170

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 6/163 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEE 71
            R      +   +  ++ P++ EM    V I  ++  KN  L++F++ DD  + +  C  
Sbjct: 10  RRKTMSKKVTETVEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDD-GVDIEQCGV 68

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD  + I  +Y LEVSSPG +RP+  + DF++  G  V  +       +++ 
Sbjct: 69  VSEKLSEKLDEVDPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYEPIAGEKQF 128

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G++     T   L  + RG     +  +AI ++ + SARL V
Sbjct: 129 EGELTAFDGTTVTLSVKDRG----RQKTVAIPYEKVASARLAV 167


>gi|148361088|ref|YP_001252295.1| hypothetical protein LPC_3059 [Legionella pneumophila str. Corby]
 gi|148282861|gb|ABQ56949.1| conserved hypothetical protein; DUF150 [Legionella pneumophila str.
           Corby]
          Length = 140

 Score =  137 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 10/146 (6%)

Query: 28  VIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P+I+ M +         + K+ LL+I++++ D  + + DC+E+S+ +S +LDVE+ I
Sbjct: 2   LLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPD-GIGIDDCQEVSKQVSAMLDVEDPI 60

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
            GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  SE    L+
Sbjct: 61  PGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVLD 120

Query: 147 KEKRGEKDMNELQIAISFDSLLSARL 172
                +         I   +++ A L
Sbjct: 121 INNEHQ--------EILLSNIVKANL 138


>gi|227112573|ref|ZP_03826229.1| hypothetical protein PcarbP_06402 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227327825|ref|ZP_03831849.1| hypothetical protein PcarcW_11031 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 150

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSED-GITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITITVEGKDEV--------FALSNIQKANLVP 148


>gi|161501882|ref|YP_048824.2| hypothetical protein ECA0710 [Pectobacterium atrosepticum SCRI1043]
          Length = 150

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSED-GITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  VA  + ++  +++K +G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVAVVLRMAVQNRRKWLGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITITVEGKDEV--------FALSNIQKANLVP 148


>gi|262274885|ref|ZP_06052696.1| UPF0090 domain-containing protein [Grimontia hollisae CIP 101886]
 gi|262221448|gb|EEY72762.1| UPF0090 domain-containing protein [Grimontia hollisae CIP 101886]
          Length = 151

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 83/157 (52%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   + ++++  ++ + +  V +  +   ++  L+I+++  +  +T+ DC E+S+ +S
Sbjct: 2   TGLEKQLLALLEAPVKALDYELVGLEFVRAGQHSTLRIYIDH-ENGITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ +   + R+ GH V   + ++  +++K  G+I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAEHYQRFVGHEVTIVLKMAMQNRRKWKGEILS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  ++ +   E        A +  ++  A L+ 
Sbjct: 121 VEGETVTIKVDGNEE--------AFALSNIAKANLVP 149


>gi|59711091|ref|YP_203867.1| hypothetical protein VF_0484 [Vibrio fischeri ES114]
 gi|75354545|sp|Q5E7L7|RIMP_VIBF1 RecName: Full=Ribosome maturation factor rimP
 gi|59479192|gb|AAW84979.1| YhbC-like protein [Vibrio fischeri ES114]
          Length = 151

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +  + +  V +  +    +  L++F++  +  + + DC E S+ IS
Sbjct: 2   TGLERQLTEMLEAPVGALGYELVGLEFVRAGEHSTLRVFIDH-ENGIFVEDCAEASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + +   +++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +     +  +   E          +  ++  A L+ 
Sbjct: 121 INGEIVTVTVDGNNE--------EFALSNISKANLVP 149


>gi|307546729|ref|YP_003899208.1| hypothetical protein HELO_4139 [Halomonas elongata DSM 2581]
 gi|307218753|emb|CBV44023.1| K09748 hypothetical protein [Halomonas elongata DSM 2581]
          Length = 153

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++++I+PV+  M F    I    + K+  L IF++  +  + + DC ++S+ +S +LDVE
Sbjct: 8   LNALIEPVVTAMGFELWGIDYLSQGKHSRLVIFIDH-EQGVGVDDCADVSRQVSAVLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G YRLEVSSPG+DRP+     F R+ GH VA ++      ++K  G + G      
Sbjct: 67  DPIAGEYRLEVSSPGMDRPLFTLEQFERYAGHTVAVKLRAPFDGRRKFQGLLAGIEGDEV 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            L+ +          +     +S+  AR++   +
Sbjct: 127 LLQLDGE--------EYCFPIESIDQARIVPRFD 152


>gi|27365055|ref|NP_760583.1| ribosome maturation protein RimP [Vibrio vulnificus CMCP6]
 gi|37680894|ref|NP_935503.1| hypothetical protein VV2710 [Vibrio vulnificus YJ016]
 gi|320155439|ref|YP_004187818.1| clustered with transcription termination protein NusA [Vibrio
           vulnificus MO6-24/O]
 gi|34223112|sp|Q8DBW2|RIMP_VIBVU RecName: Full=Ribosome maturation factor rimP
 gi|51316954|sp|Q7MI07|RIMP_VIBVY RecName: Full=Ribosome maturation factor rimP
 gi|27361201|gb|AAO10110.1| clustered with transcription termination protein NusA [Vibrio
           vulnificus CMCP6]
 gi|37199643|dbj|BAC95474.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
 gi|319930751|gb|ADV85615.1| clustered with transcription termination protein NusA [Vibrio
           vulnificus MO6-24/O]
          Length = 151

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+I+++  +  +T+ DC E+S  +S
Sbjct: 2   TGLERQLTEMLESAVVASGYELVGLEFIRAGEHSTLRIYIDH-ENGITVEDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG+DRP+ + + + ++ G  V   + ++  +++K  G+I  
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLDRPLFKPAHYEQFIGQEVNVVLKMAVANRRKWKGEIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  L  + + E          +  ++  A LI 
Sbjct: 121 VDGEAITLTVDGQQE--------EFALSNISKANLIP 149


>gi|188026374|ref|ZP_02961857.2| hypothetical protein PROSTU_03929 [Providencia stuartii ATCC 25827]
 gi|188020155|gb|EDU58195.1| hypothetical protein PROSTU_03929 [Providencia stuartii ATCC 25827]
          Length = 171

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V +  +  +   L++F++ ++  +T+ DC ++S  +S +L
Sbjct: 25  LEQKLTEMISAPVEALGFEFVGLEFVRARTSTLRVFIDSEE-GITVDDCADVSHQVSAVL 83

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LE+SSPG++RP+   + + R+ G  VA  + ++  ++++  G I     
Sbjct: 84  DVEDPISVVYNLEISSPGLERPLFTVAHYERFVGEEVALTLRIAMQNRRRWQGIIKAVEG 143

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 144 EMITVTVDGKDEV--------FALGNIQKANLVP 169


>gi|259585829|sp|B3PI94|RIMP_CELJU RecName: Full=Ribosome maturation factor rimP
          Length = 164

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 11/162 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ +I PV+E +      +  L +     L+IF++     ++L DCE +S+ IS +L
Sbjct: 5   QERLTDLIVPVVESLGCELWGLEYLTQGRYTTLRIFIDGP-QGVSLDDCERVSRQISAVL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I+G Y LEVSSPG+DRP+  ++ + R+ G  V   + ++   +++  G I    E
Sbjct: 64  DVEDPIDGEYTLEVSSPGLDRPLYTEAQYARYVGETVNLRLRIAVEGRRRFKGVISAIEE 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT-DELLRA 181
               L+ +           + +  +++    L+   D++LR 
Sbjct: 124 GALLLQFDN--------QTVRLPIETIDKGNLVPRYDDILRE 157


>gi|52842973|ref|YP_096772.1| hypothetical protein lpg2774 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|81376651|sp|Q5ZRV2|RIMP_LEGPH RecName: Full=Ribosome maturation factor rimP
 gi|91208410|sp|Q5X1C1|RIMP_LEGPA RecName: Full=Ribosome maturation factor rimP
 gi|259585808|sp|A5IHU9|RIMP_LEGPC RecName: Full=Ribosome maturation factor rimP
 gi|52630084|gb|AAU28825.1| hypothetical protein lpg2774 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 147

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 81/153 (52%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  D+  +++P+I+ M +         + K+ LL+I++++ D  + + DC+E+S+ +S +
Sbjct: 2   INDDLIVLLEPIIKNMGYELWGCEYLSQGKHSLLRIYIDKPD-GIGIDDCQEVSKQVSAM 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I GHY LE+SSPGI RP+     + R+ G+ +  +       K+KL G I+  S
Sbjct: 61  LDVEDPIPGHYSLEISSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSAS 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    L+     +         I   +++ A L
Sbjct: 121 EDTIVLDINNEHQ--------EILLSNIVKANL 145


>gi|330447379|ref|ZP_08311028.1| ribosome maturation protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491570|dbj|GAA05525.1| ribosome maturation protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 151

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 80/157 (50%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++P +  + +  V +  +    +  L++F++  +  + + DC E+S+ IS
Sbjct: 2   TALETQLTEMLEPSVLALGYELVGLEFIRAGEHSTLRVFIDH-ENGINVDDCAEVSRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH  +  + ++ G+++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFVGHEASIVLKMAMGNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  L  +   E        + +  ++  A L+ 
Sbjct: 121 VDGELITLNVDGNEE--------SFALSNISKANLVP 149


>gi|332290218|ref|YP_004421070.1| hypothetical protein UMN179_02160 [Gallibacterium anatis UMN179]
 gi|330433114|gb|AEC18173.1| hypothetical protein UMN179_02160 [Gallibacterium anatis UMN179]
          Length = 153

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++QP +E+M F  + I          +++++++ +  +T+ DC ++S+ +  I
Sbjct: 4   LEQKLQDLLQPTVEDMGFELLGIECTRAGRYSTVRLYIDK-ENGVTIDDCSDVSREVGAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  V   + ++   ++K  G ++   
Sbjct: 63  LDVEDPISDKYNLEVSSPGLDRPLFTLAHYQRFVGEEVVIHLRIAMSGRRKWQGDLIKVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  E          +   +F ++  A ++ 
Sbjct: 123 GDMITLNVEG--------QEQVFAFSNIQKANIVP 149


>gi|229577503|ref|YP_001178316.2| hypothetical protein Ent638_3607 [Enterobacter sp. 638]
          Length = 150

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I+  +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMIKAPVEALGYELVGIEFIRSRTSTLRIYIDSED-GINVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+ RPM     +  + G  VA  + ++  +++K  G I     
Sbjct: 63  DVEDPITVAYNLEVSSPGLHRPMFTAEHYTHYIGEEVAVVLRMAVQNRRKWQGVIKAVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|91208369|sp|Q6D9A7|RIMP_ERWCT RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 6   LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSED-GITVDDCADVSHQVSAVL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  VA  + ++  +++K +G I     
Sbjct: 65  DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVAVVLRMAVQNRRKWLGVIKAVDG 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 125 EMITITVEGKDEV--------FALSNIQKANLVP 150


>gi|290454910|emb|CBJ57168.1| YhbC-like protein [Pectobacterium carotovorum]
          Length = 152

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +  + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +L
Sbjct: 6   LEQKLTEMISAPVAALGYELVGIEFIRSRQSTLRIYIDSED-GITVDDCADVSHQVSAVL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++RP+   + +L + G  V   + ++  +++K +G I     
Sbjct: 65  DVEDPITVAYNLEVSSPGLERPLFTAAHYLHFVGEEVTVVLRMAVQNRRKWLGVIKAVDG 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 125 EMITITVEGKDEV--------FALSNIQKANLVP 150


>gi|270265057|ref|ZP_06193320.1| putative cytoplasmic protein [Serratia odorifera 4Rx13]
 gi|270040991|gb|EFA14092.1| putative cytoplasmic protein [Serratia odorifera 4Rx13]
          Length = 150

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++  +  + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDS-ENGINVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEEPITVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGIIKSVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVTVEGKDEV--------FALSNIQKANLVP 148


>gi|90581551|ref|ZP_01237344.1| hypothetical protein VAS14_07344 [Vibrio angustum S14]
 gi|90437313|gb|EAS62511.1| hypothetical protein VAS14_07344 [Vibrio angustum S14]
          Length = 151

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 80/157 (50%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++P +  + +  V +  +    +  L++F++  +  + + DC E+S+ IS
Sbjct: 2   TALETQLTEMLEPSVLALGYELVGLEFIRAGEHSTLRVFIDH-ENGINVDDCAEVSRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH     + ++ G+++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEANIVLKMAMGNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  L+ +   E        + +  ++  A L+ 
Sbjct: 121 VEGELITLKVDGNEE--------SFALSNISKANLVP 149


>gi|163802302|ref|ZP_02196196.1| hypothetical protein 1103602000417_AND4_14441 [Vibrio sp. AND4]
 gi|159173831|gb|EDP58645.1| hypothetical protein AND4_14441 [Vibrio sp. AND4]
          Length = 151

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E + +  V +  +    +  L+I+++  +  + +  C E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEALGYELVGLEFIRAGAHSTLRIYIDH-ENGINVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKATHYEQFIGHEVSIVLKMAVANRRKWNGIIHN 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  E + E          +  ++  A LI 
Sbjct: 121 VDGETIAVTCEGQQE--------EFALSNISKANLIP 149


>gi|167644003|ref|YP_001681666.1| hypothetical protein Caul_0030 [Caulobacter sp. K31]
 gi|259585739|sp|B0T164|RIMP_CAUSK RecName: Full=Ribosome maturation factor rimP
 gi|167346433|gb|ABZ69168.1| protein of unknown function DUF150 [Caulobacter sp. K31]
          Length = 199

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 6/168 (3%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++ PV E + +  V++ L+       LQI  ER DG+M + DC +LS+AIS ILD  
Sbjct: 11  LVELLDPVAESVGYEIVRLRLMGGAEQRRLQIMAERPDGDMNVEDCAKLSRAISEILDAA 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G Y LEVSSPG+DRP+ R  DF  + G  V  E+   +  +++  G++ G  +   
Sbjct: 71  DPISGEYTLEVSSPGVDRPLTRLKDFETYAGLEVRIELDRVAEGRKRFKGELAGVEDGQV 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
            L  E       ++  +   F+ ++ A+L++TD+L++       +  G
Sbjct: 131 GLNLEGE-----DDTTVYFPFEWIVDAKLVLTDQLMKRGAEQRAARVG 173


>gi|197287228|ref|YP_002153100.1| hypothetical protein PMI3416 [Proteus mirabilis HI4320]
 gi|226703818|sp|B4F2B7|RIMP_PROMH RecName: Full=Ribosome maturation factor rimP
 gi|194684715|emb|CAR46695.1| conserved hypothetical protein [Proteus mirabilis HI4320]
          Length = 152

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 81/159 (50%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   +++++   +E + F  V +  +  +   L+I+++ ++  +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMVSAPVEALGFEFVGLEFIRGRVSTLRIYIDSEE-GITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I+  Y LE+SSPG++RP+   + + ++ G  VA  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPIQTFYNLEISSPGLERPLFTTTHYEQFIGEEVAVVLRIAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +     +  + + E          +  ++  A L+ 
Sbjct: 120 KSVAGEMITVTVDGKDEV--------FALSNIQKANLVP 150


>gi|75760861|ref|ZP_00740875.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491645|gb|EAO54847.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 174

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 15  RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGA 73

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 74  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 133

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 134 EGKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 173


>gi|291327116|ref|ZP_06127048.2| hypothetical protein PROVRETT_09231 [Providencia rettgeri DSM 1131]
 gi|291311612|gb|EFE52065.1| hypothetical protein PROVRETT_09231 [Providencia rettgeri DSM 1131]
          Length = 171

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   +E + F  V +  +  +   L++F++ ++  +T+ DC ++S  +S +L
Sbjct: 25  LEQKLTEMISAPVEALGFEFVGLEFVRGRTSTLRVFIDSEE-GITVDDCADVSHQVSAVL 83

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LE+SSPG++RP+   + + R+ G  VA  + ++  +++K  G I     
Sbjct: 84  DVEDPISVIYNLEISSPGLERPLFTIAHYERFMGEEVALTLRIAMQNRRKWQGIIKAIDG 143

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 144 EMITVTVDGKDEV--------FALGNIQKANLVP 169


>gi|259586207|sp|A8G905|RIMP_SERP5 RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++ ++   +E + F  V I  +  +   L+I+++  +  + + DC ++S  
Sbjct: 1   MGLSTLEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDS-ENGINVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I
Sbjct: 60  VSAVLDVEEPITVAYNLEVSSPGLDRPMFTAEHYTRFLGDEVSLVLRMAVQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  E + E          +  ++  A L+ 
Sbjct: 120 KSVDGEMITVAVEGKDEV--------FALSNIQKANLVP 150


>gi|254496139|ref|ZP_05109037.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254354626|gb|EET13263.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 147

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++  ++ P I +M +         + K+ LL+I++++ D  + + DC+++S  +S +
Sbjct: 2   IQDELEQLLAPTINDMGYELWGCEYLSQGKHSLLRIYIDKAD-GIGIEDCQDVSHQVSAL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I G+Y LEVSSPGI RP+     + R+ G  V  +      +K+KL+G I+  S
Sbjct: 61  LDVEDPIPGNYSLEVSSPGIPRPLFYSWQYQRYIGQSVQIKTFKPVNNKRKLLGTIVSAS 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    L                + F +++ A L
Sbjct: 121 ENSVVLNINGEDH--------ELLFSNIVKAYL 145


>gi|148556721|ref|YP_001264303.1| hypothetical protein Swit_3820 [Sphingomonas wittichii RW1]
 gi|259586199|sp|A5VCZ9|RIMP_SPHWW RecName: Full=Ribosome maturation factor rimP
 gi|148501911|gb|ABQ70165.1| protein of unknown function DUF150 [Sphingomonas wittichii RW1]
          Length = 186

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 9/166 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAI 76
           M     ++ +I+P  + +    V+++    K+   LQ+  ER D   + + DCE LS+ I
Sbjct: 1   MADIAALTKLIEPEAKALGLDLVRVAFFGGKSDPTLQVMAERPDTRQLDIADCEALSRRI 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S   D  + IE  YRLEVSSPGIDRP+ R  D+  W+G     ++      +++  G+I+
Sbjct: 61  SDKFDELDPIEDAYRLEVSSPGIDRPLTRVKDWADWSGFDARVKLAAPLDGRKQFDGRIV 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
            +      L   K G       ++ +    + SA+LI+TD L++A+
Sbjct: 121 ASDGDSVTLGVNKLG-------EVTVPLAQIASAKLILTDALIKAT 159


>gi|259585711|sp|A0KNE5|RIMP_AERHH RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +  + F    I  +   K+  L+++++  +  +++ +C E+S  +  I
Sbjct: 4   LEQRLTDLLEAPVVALGFELWGIEFIRAGKHSTLRVYIDG-EHGVSVENCAEVSHQVGAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+ + + F ++ G   A  + +++ +++K  G I    
Sbjct: 63  MDVEDPITEEYYLEVSSPGLDRPLFKVAQFEKYVGQEAAVTLRMATNNRRKFKGVIKAVQ 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                L  + + E         ++F ++  A ++  
Sbjct: 123 GDMITLTVDGKDEV--------LAFTNIQKANIVPN 150


>gi|156975665|ref|YP_001446572.1| hypothetical protein VIBHAR_03398 [Vibrio harveyi ATCC BAA-1116]
 gi|166990836|sp|A7MUV0|RIMP_VIBHB RecName: Full=Ribosome maturation factor rimP
 gi|156527259|gb|ABU72345.1| hypothetical protein VIBHAR_03398 [Vibrio harveyi ATCC BAA-1116]
          Length = 151

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E   +  V +  +    +  L+I+++  +  + +  C E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEATGYELVGLEFIRAGAHSTLRIYIDH-ENGINVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  E + E          +  ++  A LI 
Sbjct: 121 VDGETIAVTCEGQQE--------EFALSNISKANLIP 149


>gi|254490571|ref|ZP_05103757.1| conserved hypothetical protein [Methylophaga thiooxidans DMS010]
 gi|224464315|gb|EEF80578.1| conserved hypothetical protein [Methylophaga thiooxydans DMS010]
          Length = 148

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   +  +I+  IE + +  V +  ++     +L+I+++  +  + + DCE++S  IS
Sbjct: 1   MAITDQVEQLIEAPIESLGYELVGVEYIQGGPDAILRIYID-AEQGIGIEDCEKVSHQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE  I   Y LEVSSPG DRP+ +  DF R+ G  V   + L    ++   G + G
Sbjct: 60  GVLDVEEPIRSAYMLEVSSPGFDRPLFKARDFERFAGAEVKISMKLPVQGRRNFTGVLQG 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            S+    +E +            A+    L  ARL+
Sbjct: 120 FSDGEVLIEVDGEI--------YALPLAKLAKARLV 147


>gi|209694188|ref|YP_002262116.1| hypothetical protein VSAL_I0596 [Aliivibrio salmonicida LFI1238]
 gi|226707769|sp|B6ENE0|RIMP_ALISL RecName: Full=Ribosome maturation factor rimP
 gi|208008139|emb|CAQ78281.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 151

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +  + +  V +  +    +  L++F++  +  + + DC E S+ IS
Sbjct: 2   TGLERQLTEMLEAPVGALGYELVGLEFIRAGEHSTLRVFIDH-ENGIFVEDCAEASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + +   +++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILD 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +     +  +   E          +  ++  A L+ 
Sbjct: 121 INGEIVTVTVDGNNE--------EFALSNISKANLVP 149


>gi|153876665|ref|ZP_02003868.1| Protein of unknown function DUF150 [Beggiatoa sp. PS]
 gi|152066871|gb|EDN66132.1| Protein of unknown function DUF150 [Beggiatoa sp. PS]
          Length = 144

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 11/154 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +  ++ P+I  + +  V +  L   + LL+++++     + L DCE +S  +S +L
Sbjct: 2   LDNQLQQLLAPIIIGLGYELVGVERLS--STLLRVYIDHP-KGINLSDCERVSYQVSGVL 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DV+N I+G Y LEVSSPG DRP+     F R+ GH V   +      ++   G +    +
Sbjct: 59  DVQNPIKGRYTLEVSSPGWDRPLFTLEHFKRFVGHKVKVSLRQPKEGQRHFTGLLQAIED 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  +        E +  + ++ +  A L+ 
Sbjct: 119 RNVIVVAD--------ETEYCLPYEKIDKAHLVP 144


>gi|259585706|sp|Q0VSS3|RIMP_ALCBS RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              ++ ++ PV+E++ F    +  ++ +  +L++F++  D  +++ DC  +S  +S +LD
Sbjct: 5   TEQLTELLAPVVEDLGFVLWGVEYIQGRGAVLRVFIDHAD-GISVDDCAAVSHEVSGVLD 63

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I G + LEVSSPG+DRPM   + ++ + G  V  +++     K+K+   I+     
Sbjct: 64  VEDPIPGEFNLEVSSPGMDRPMFDITQYVDYIGEDVQLKLLAPVSGKRKMTAAIVAVDGD 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +E +           + + +  +  ARL
Sbjct: 124 TLVVELDGE--------TLRVPYSQVDRARL 146


>gi|254507524|ref|ZP_05119658.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
 gi|219549594|gb|EED26585.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
          Length = 151

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++  +  + + DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDH-ENGINVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  +   E          +  ++  A LI 
Sbjct: 121 VDGETISVTVDGNEE--------EFALSNISKANLIP 149


>gi|260775411|ref|ZP_05884308.1| UPF0090 domain-containing protein [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608592|gb|EEX34757.1| UPF0090 domain-containing protein [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 151

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 79/157 (50%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++  +  +++ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDH-ENGISVDDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIHA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  +   E          +  ++  A LI 
Sbjct: 121 IEGETVTVTVDGNAE--------EFALSNISKANLIP 149


>gi|311695960|gb|ADP98833.1| protein belonging to uncharacterized protein family UPF0090 [marine
           bacterium HP15]
          Length = 153

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 9/156 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++QPV+E + +    I    +  + LL++F++  +  + + DCE++S+ IS ++D
Sbjct: 6   KQLEDILQPVVEGLGYEFWGIEFRSQGHHSLLRVFIDDAENGIGVDDCEKVSRQISGVMD 65

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I+  Y LEVSSPG+DRP+ R   +  + GH V   + ++   ++K  G I G    
Sbjct: 66  VEDPIQTEYTLEVSSPGMDRPLFRLEQYEAFVGHQVQIRLRMAFEGRRKFQGLIKGVEG- 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                        +++ +  + FDS+  A ++   E
Sbjct: 125 -------DDVVVVVDDHEYLLPFDSIEKAHIVPVFE 153


>gi|253991504|ref|YP_003042860.1| hypothetical protein PAU_04031 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638382|emb|CAR67004.1| Conserved Hypothetical Protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782954|emb|CAQ86119.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 152

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++++I   +E + F  V +  +  +   L+I+++  +  +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDS-ENGITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LE+SSPG++RP+     + R+ G  V+  + L+  +++K +G I
Sbjct: 60  VSAVLDVEDPISVLYNLEISSPGLERPLFTAEHYQRFIGEEVSLVLRLAMQNRRKWLGVI 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  + + E          +  ++  A L+ 
Sbjct: 120 KTVDGEMITVTVDGKDEV--------FALSNIQKANLVP 150


>gi|118479037|ref|YP_896188.1| hypothetical protein BALH_3445 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118418262|gb|ABK86681.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 174

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 15  RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGA 73

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 74  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 133

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 134 EGKMLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 173


>gi|56419794|ref|YP_147112.1| hypothetical protein GK1259 [Geobacillus kaustophilus HTA426]
 gi|81347603|sp|Q5L0J2|RIMP_GEOKA RecName: Full=Ribosome maturation factor rimP
 gi|56379636|dbj|BAD75544.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 157

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ P+++EM    V I  ++  KN  L++F++ DD  + +  C  +S+ 
Sbjct: 1   MSKKVTETVEQLVTPILDEMGLELVDIEYVKEGKNWFLRVFIDSDD-GVDIEQCGAVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++
Sbjct: 60  LSEKLDEVDPIPHNYFLEVSSPGAERPLKKAKDFAKAIGKNVYIKTYEPIEGEKQFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                T   L  + RG     +  +AI ++ + SARL V
Sbjct: 120 TAFDGTTVTLLVKDRG----RQKTVAIPYEKVASARLAV 154


>gi|229593539|ref|YP_001476723.2| hypothetical protein Spro_0487 [Serratia proteamaculans 568]
          Length = 150

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++  +  + + DC ++S  +S +L
Sbjct: 4   LEQKLTEMLSAPVEALGFELVGIEFIRARQSTLRIYIDS-ENGINVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 63  DVEEPITVAYNLEVSSPGLDRPMFTAEHYTRFLGDEVSLVLRMAVQNRRKWQGIIKSVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E + E          +  ++  A L+ 
Sbjct: 123 EMITVAVEGKDEV--------FALSNIQKANLVP 148


>gi|51316751|sp|Q7MYY5|RIMP_PHOLL RecName: Full=Ribosome maturation factor rimP
 gi|36787788|emb|CAE16903.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 152

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   ++++I   +E + F  V +  +  +   L+I+++  +  +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDS-ENGITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I   Y LE+SSPG++RP+     + R+ G  V+  + ++  +++K +G I
Sbjct: 60  VSAVLDVEDPISVLYNLEISSPGLERPLFTTEHYQRFIGEEVSLVLRIAMQNRRKWLGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +  + + E          +  ++  A L+ 
Sbjct: 120 KTVDGEMITVTVDGKDEV--------FALSNIQKANLVP 150


>gi|119477403|ref|ZP_01617594.1| hypothetical protein GP2143_00477 [marine gamma proteobacterium
           HTCC2143]
 gi|119449329|gb|EAW30568.1| hypothetical protein GP2143_00477 [marine gamma proteobacterium
           HTCC2143]
          Length = 151

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ ++ PV E + ++   +      K  +++I+++  D  + + DC ++S+ +  + DVE
Sbjct: 8   LADLVAPVAEALGYQLWGVEYLSHGKQSVVRIYIDSPD-GIDVDDCAKVSRQVGSVFDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G Y LEVSSPG+DRP+     +  + G  V  ++  +   ++   G++        
Sbjct: 67  DPIMGEYTLEVSSPGMDRPLFALEQYRPYVGEQVKIKLRTAFDGRRNFSGRMTAIEG--- 123

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                      +++ +  + F+ +  A ++ 
Sbjct: 124 -----DDVVVAVDDEEYLLPFELIDKANIVP 149


>gi|65321144|ref|ZP_00394103.1| COG0779: Uncharacterized protein conserved in bacteria [Bacillus
           anthracis str. A2012]
          Length = 174

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 15  RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGA 73

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 74  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 133

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 134 EGKMLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 173


>gi|261419459|ref|YP_003253141.1| hypothetical protein GYMC61_2043 [Geobacillus sp. Y412MC61]
 gi|319766274|ref|YP_004131775.1| hypothetical protein GYMC52_1166 [Geobacillus sp. Y412MC52]
 gi|261375916|gb|ACX78659.1| protein of unknown function DUF150 [Geobacillus sp. Y412MC61]
 gi|317111140|gb|ADU93632.1| protein of unknown function DUF150 [Geobacillus sp. Y412MC52]
          Length = 157

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ P+++EM    V I  ++  KN  L++F++ DD  + +  C  +S+ 
Sbjct: 1   MSKKVTETVEQLVTPILDEMGLELVDIEYVKEGKNWFLRVFIDSDD-GVDIEQCGAVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++
Sbjct: 60  LSEKLDEVDPIPYNYFLEVSSPGAERPLKKAKDFAKAIGKNVYIKTYEPIEGEKQFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                T   L  + RG     +  +AI ++ + SARL V
Sbjct: 120 TAFDGTTVTLLVKDRG----RQKTVAIPYEKVASARLAV 154


>gi|53804602|ref|YP_113779.1| hypothetical protein MCA1317 [Methylococcus capsulatus str. Bath]
 gi|81682218|sp|Q609B8|RIMP_METCA RecName: Full=Ribosome maturation factor rimP
 gi|53758363|gb|AAU92654.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 150

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 10/159 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   +  +I+PV+  + +    I   + +  +L+++++     + L DC ++S  +S 
Sbjct: 1   MRMPEHLQRLIEPVVTGLGYELAGIEF-DARARVLRVYIDHP-QGIGLDDCSKVSYQLSG 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y+LE+SSPG+DRP+     F R+ G  V  + + S   +++  G+I G 
Sbjct: 59  MLDVEDPIPGQYQLEISSPGLDRPLFTLEHFKRFTGRRVRLQTLRSLDGQRRFKGEIAGV 118

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                 LE +            AI FD +  ARLI   +
Sbjct: 119 RGDVIDLEDDNGLH--------AIPFDLIDKARLIPEFD 149


>gi|261253852|ref|ZP_05946425.1| UPF0090 domain-containing protein [Vibrio orientalis CIP 102891]
 gi|260937243|gb|EEX93232.1| UPF0090 domain-containing protein [Vibrio orientalis CIP 102891]
          Length = 151

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++  +  + + DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDH-ENGINVDDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIHA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  E   E          +  ++  A LI 
Sbjct: 121 VDGETISVTVEGNEE--------EFALSNISKANLIP 149


>gi|323491075|ref|ZP_08096267.1| ribosome maturation protein RimP [Vibrio brasiliensis LMG 20546]
 gi|323314739|gb|EGA67811.1| ribosome maturation protein RimP [Vibrio brasiliensis LMG 20546]
          Length = 151

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++  +  + + DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDH-ENGINVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGIIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  E   E          +  ++  A LI 
Sbjct: 121 VDGETISVTVEGNEE--------EFALSNISKANLIP 149


>gi|170717518|ref|YP_001784610.1| hypothetical protein HSM_1288 [Haemophilus somnus 2336]
 gi|226695902|sp|B0UU11|RIMP_HAES2 RecName: Full=Ribosome maturation factor rimP
 gi|168825647|gb|ACA31018.1| protein of unknown function DUF150 [Haemophilus somnus 2336]
          Length = 153

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 9/155 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++QP +E++      I          +++++++ DG +T+ DC ++S+ +S +
Sbjct: 4   LEDKLQELLQPSVEDLGCELWGIECQRSGRFFTVRLYIDKKDGGVTVDDCADVSRQVSAV 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP+     F  + G  ++  + +   D++K  GK+    
Sbjct: 64  LDVEDPIADKYNLEVSSPGLNRPLFTLKQFENYIGQDISVHLRVPMFDRRKWQGKLEKIE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  + + +  +        F ++  A ++ 
Sbjct: 124 NDMLTLIVDNQPQVLV--------FGNIQKANVVP 150


>gi|322514416|ref|ZP_08067459.1| hypothetical protein HMPREF0027_1211 [Actinobacillus ureae ATCC
           25976]
 gi|322119664|gb|EFX91722.1| hypothetical protein HMPREF0027_1211 [Actinobacillus ureae ATCC
           25976]
          Length = 153

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE M    V I        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEELVSDTIESMGCELVGIECQRAGRFLTVRLYIDK-EGGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLVHYQRFIGQEVVIHLCIPMFDRRKWQGKLESVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  +              +F ++  A L+ 
Sbjct: 123 GDLITLTVDNEAR--------QFAFGNIQKANLVP 149


>gi|320540175|ref|ZP_08039830.1| putative conserved protein [Serratia symbiotica str. Tucson]
 gi|320029841|gb|EFW11865.1| putative conserved protein [Serratia symbiotica str. Tucson]
          Length = 156

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ ++   +E + F  V I  +  +   L+I+++  +  + + DC ++S  +S +L
Sbjct: 10  LEQKLTEMLLAPVEALGFEFVGIEFIRARQSTLRIYIDS-ENGINVDDCADVSHQVSAVL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  I   Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I     
Sbjct: 69  DVEEPIAVAYNLEVSSPGLDRPMFTAEHYTRFLGEEVSLVLRMAVQNRRKWQGIIKSVEG 128

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A LI 
Sbjct: 129 EMITVTVDGKDEV--------FALSNIQKANLIP 154


>gi|269961978|ref|ZP_06176333.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833301|gb|EEZ87405.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 151

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E   +  V +  +    +  L+I+++  +  + +  C E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVEASGYELVGLEFIRAGAHSTLRIYIDH-ENGINVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWAGIIHS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 VDGETIAVTVDGQQE--------EFALSNISKANLIP 149


>gi|119713530|gb|ABL97583.1| hypothetical protein MBMO_EB0-35D03.0046 [uncultured marine
           bacterium EB0_35D03]
          Length = 153

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 8/155 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +A  + S+I P I ++ +  + +      K+ +L+++++  +  + + DCE +S+ +S 
Sbjct: 3   KIADKLFSIINPSINDLGYELLGVEYVSSGKHSVLRLYIDS-EKGIGVDDCETVSRQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           I+DVE+ I G Y LEVSSPGI+RP+ + + + R+ GH V          ++   G I   
Sbjct: 62  IMDVEDPISGQYNLEVSSPGIERPLFKVAHYQRFLGHDVRLRTYRPLDGRRNFTGAIGSV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           SET    E             + +  D +  A L+
Sbjct: 122 SETSNTFEL------VTELGPVTLDIDLIEKANLV 150


>gi|221134837|ref|ZP_03561140.1| hypothetical protein GHTCC_07897 [Glaciecola sp. HTCC2999]
          Length = 165

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ ++ P  E + F  V +  +   K+ +L++F++  D  +++  C ++SQ  S
Sbjct: 15  SQLEKKLTEMLTPAAESLGFEMVGVEFVRAGKHSILRVFIDHPD-GISVDHCADVSQQAS 73

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I   Y LEVSSPG+DRP+ + + +    G +VA  + +   +++   G ++ 
Sbjct: 74  AILDVEDPINTEYNLEVSSPGMDRPLFKTAHYEAIVGEMVAVRLRMPMNERRNFKGTLLS 133

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + +           ++  ++    L+ 
Sbjct: 134 CENDNIVVEVDGQS--------YTLAIMNIEKGNLVP 162


>gi|303249648|ref|ZP_07335853.1| hypothetical protein APP6_1055 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303253713|ref|ZP_07339850.1| hypothetical protein APP2_0900 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247607|ref|ZP_07529650.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307252188|ref|ZP_07534086.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256658|ref|ZP_07538437.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302647438|gb|EFL77657.1| hypothetical protein APP2_0900 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302651460|gb|EFL81611.1| hypothetical protein APP6_1055 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306855877|gb|EFM88037.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860332|gb|EFM92347.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306864706|gb|EFM96610.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 153

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE M    V I        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEELVSDTIESMGCELVGIECQRAGRFLTVRLYIDK-EGGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLKHYQRFIGQEVVIHLRIPMFDRRKWQGKLESVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  +              +F ++  A L+ 
Sbjct: 123 GDLITLTVDNE--------TRQFAFGNIQKANLVP 149


>gi|229525294|ref|ZP_04414699.1| clustered with transcription termination protein NusA [Vibrio
           cholerae bv. albensis VL426]
 gi|229338875|gb|EEO03892.1| clustered with transcription termination protein NusA [Vibrio
           cholerae bv. albensis VL426]
          Length = 151

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++  +  +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDH-ENGITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGIIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 IDGETVVVMVDGQEEH--------FALSNISKANLIP 149


>gi|33152525|ref|NP_873878.1| hypothetical protein HD1463 [Haemophilus ducreyi 35000HP]
 gi|51316788|sp|Q7VLI0|RIMP_HAEDU RecName: Full=Ribosome maturation factor rimP
 gi|33148748|gb|AAP96267.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 154

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 9/155 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +I   IE M +  V +        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLTVLISDTIESMGYELVGVECQHAGRFLTVRLYIDK-EGGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+    
Sbjct: 63  FDVEDPISDKYNLEVSSPGLDRPLFTLAHYARFVGREMVIHLRIPMFDRRKWQGKLTKVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                LE E  G       +    F ++  A LI 
Sbjct: 123 GDLISLEIENNG-------EHQFIFSNIQKANLIP 150


>gi|262401661|ref|ZP_06078227.1| UPF0090 domain-containing protein [Vibrio sp. RC586]
 gi|262352078|gb|EEZ01208.1| UPF0090 domain-containing protein [Vibrio sp. RC586]
          Length = 151

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 80/157 (50%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++  +  +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDH-ENGITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKPAHYEQFIGHEVSIVLKMAVANRRKWKGIIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 IEGETVAVTVDGQEEH--------FALSNISKANLIP 149


>gi|161579560|ref|NP_931695.2| hypothetical protein plu4531 [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 150

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++++I   +E + F  V +  +  +   L+I+++  +  +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDS-ENGITVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LE+SSPG++RP+     + R+ G  V+  + ++  +++K +G I     
Sbjct: 63  DVEDPISVLYNLEISSPGLERPLFTTEHYQRFIGEEVSLVLRIAMQNRRKWLGIIKTVDG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 123 EMITVTVDGKDEV--------FALSNIQKANLVP 148


>gi|145298042|ref|YP_001140883.1| hypothetical protein ASA_1008 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166919114|sp|A4SJR3|RIMP_AERS4 RecName: Full=Ribosome maturation factor rimP
 gi|142850814|gb|ABO89135.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 152

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +  + F    I  +    +  L++F++  +  +T+ +C E+S  +  I
Sbjct: 4   LEQRLTDLLEAPVVALGFELWGIEFIRAGNHSTLRVFIDG-ENGVTVENCAEVSHQVGAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+ + + F ++ G   A ++ +++ +++K  G I    
Sbjct: 63  MDVEDPITEEYFLEVSSPGLDRPLFKVAQFEKYVGQEAAVQLRMATNNRRKFKGVIKAVQ 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                L  + + +         ++F ++  A ++  
Sbjct: 123 GDMITLTVDGKDDV--------LAFTNIQKANIVPN 150


>gi|312885215|ref|ZP_07744894.1| hypothetical protein VIBC2010_19055 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367155|gb|EFP94728.1| hypothetical protein VIBC2010_19055 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 151

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+IF++  +  + + DC E+S+ +S
Sbjct: 2   TGLEKQLTEMLEAPVAASGYELVGLEFIRAGEHSTLRIFIDHAN-GINVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSLVLKMAMNNRRKWKGIIES 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  +   E          +  ++  A LI 
Sbjct: 121 VDGEIISIAVDGNTE--------EFALSNISKANLIP 149


>gi|297530566|ref|YP_003671841.1| hypothetical protein GC56T3_2294 [Geobacillus sp. C56-T3]
 gi|297253818|gb|ADI27264.1| protein of unknown function DUF150 [Geobacillus sp. C56-T3]
          Length = 157

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ P+++EM    V I  ++  KN  L++F++ DD  + +  C  +S+ 
Sbjct: 1   MSKKVTETVEQLVTPILDEMGLELVDIEYVKEGKNWFLRVFIDSDD-GVDIEQCGAVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++
Sbjct: 60  LSEKLDEVDPIPYNYFLEVSSPGAERPLKKAKDFAKAIGKNVYIKTYEPIEGERQFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                T   L  + RG     +  +AI ++ + SARL V
Sbjct: 120 TAFDGTTVTLLVKDRG----RQKTVAIPYEKVASARLAV 154


>gi|292492784|ref|YP_003528223.1| hypothetical protein Nhal_2769 [Nitrosococcus halophilus Nc4]
 gi|291581379|gb|ADE15836.1| protein of unknown function DUF150 [Nitrosococcus halophilus Nc4]
          Length = 150

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              IS +++PV+  + +  V +  L   K +LL+I+++     +T+ DCE +S  +S +L
Sbjct: 4   DERISKLVEPVVTALGYELVGVERLSIGKGVLLRIYIDTPL-GVTVDDCERVSHQVSALL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  +   Y LE+SSPG+DRP+  +  F R+ G  V+  +      +++  G + G   
Sbjct: 63  DVEEPMASPYTLEISSPGLDRPLFTEEHFKRFAGAEVSITLSEPLNGRRRFKGLLRGMRG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  E          +  +  + +  ARLI 
Sbjct: 123 NCVVILAEGE--------EFELPLEGIRKARLIP 148


>gi|228992545|ref|ZP_04152472.1| hypothetical protein bpmyx0001_32850 [Bacillus pseudomycoides DSM
           12442]
 gi|228998593|ref|ZP_04158180.1| hypothetical protein bmyco0003_31540 [Bacillus mycoides Rock3-17]
 gi|229006093|ref|ZP_04163781.1| hypothetical protein bmyco0002_30140 [Bacillus mycoides Rock1-4]
 gi|228755169|gb|EEM04526.1| hypothetical protein bmyco0002_30140 [Bacillus mycoides Rock1-4]
 gi|228761061|gb|EEM10020.1| hypothetical protein bmyco0003_31540 [Bacillus mycoides Rock3-17]
 gi|228767179|gb|EEM15815.1| hypothetical protein bpmyx0001_32850 [Bacillus pseudomycoides DSM
           12442]
          Length = 164

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 6/167 (3%)

Query: 10  KYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRD 68
             E R+F D  +   + ++ QP++EE++   V +  ++  K+  L++ ++  +  + + +
Sbjct: 2   AAERRLFMDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVSIDS-ETGVDIEE 60

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           C  +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       +
Sbjct: 61  CGAVSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGE 120

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +   GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 121 KMFEGKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|152995056|ref|YP_001339891.1| hypothetical protein Mmwyl1_1025 [Marinomonas sp. MWYL1]
 gi|189038545|sp|A6VU27|RIMP_MARMS RecName: Full=Ribosome maturation factor rimP
 gi|150835980|gb|ABR69956.1| protein of unknown function DUF150 [Marinomonas sp. MWYL1]
          Length = 153

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 10/152 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           +  +I+PV+E + F    +  L   K+ +L+I++E D +  + + DC  +S+ +S ILDV
Sbjct: 8   LEELIRPVVEGLGFEFWGMEYLSLGKDSVLRIYIETDAEKGIDVEDCARVSRQVSSILDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G Y LEVSSPG+DRP+   + +  + G +V+  + +    ++K  G++MG     
Sbjct: 68  EDPITGEYNLEVSSPGLDRPLFSLAQYQAYIGSIVSLRLRVPFDGRRKFKGQLMGIESED 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +  ++         +  +  D +  A ++ 
Sbjct: 128 IVIRVDQE--------EYLLPIDLIDKANVVP 151


>gi|15640661|ref|NP_230290.1| hypothetical protein VC0641 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587845|ref|ZP_01677602.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121728393|ref|ZP_01681421.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673580|ref|YP_001216135.1| hypothetical protein VC0395_A0172 [Vibrio cholerae O395]
 gi|153215845|ref|ZP_01950177.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153801997|ref|ZP_01956583.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153818682|ref|ZP_01971349.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822534|ref|ZP_01975201.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153826540|ref|ZP_01979207.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153829155|ref|ZP_01981822.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227080822|ref|YP_002809373.1| hypothetical protein VCM66_0599 [Vibrio cholerae M66-2]
 gi|229505737|ref|ZP_04395247.1| clustered with transcription termination protein NusA [Vibrio
           cholerae BX 330286]
 gi|229509230|ref|ZP_04398715.1| clustered with transcription termination protein NusA [Vibrio
           cholerae B33]
 gi|229512903|ref|ZP_04402370.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TMA 21]
 gi|229519561|ref|ZP_04409004.1| clustered with transcription termination protein NusA [Vibrio
           cholerae RC9]
 gi|229520932|ref|ZP_04410354.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TM 11079-80]
 gi|229530446|ref|ZP_04419834.1| clustered with transcription termination protein NusA [Vibrio
           cholerae 12129(1)]
 gi|229608848|ref|YP_002879496.1| hypothetical protein VCD_003770 [Vibrio cholerae MJ-1236]
 gi|254292207|ref|ZP_04962975.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254850875|ref|ZP_05240225.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744142|ref|ZP_05418095.1| UPF0090 domain-containing protein [Vibrio cholera CIRS 101]
 gi|262156118|ref|ZP_06029237.1| UPF0090 domain-containing protein [Vibrio cholerae INDRE 91/1]
 gi|262169940|ref|ZP_06037630.1| UPF0090 domain-containing protein [Vibrio cholerae RC27]
 gi|262189772|ref|ZP_06048123.1| UPF0090 domain-containing protein [Vibrio cholerae CT 5369-93]
 gi|298500757|ref|ZP_07010560.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|34223077|sp|Q9KU82|RIMP_VIBCH RecName: Full=Ribosome maturation factor rimP
 gi|172047699|sp|A5F924|RIMP_VIBC3 RecName: Full=Ribosome maturation factor rimP
 gi|254806528|sp|C3LSP6|RIMP_VIBCM RecName: Full=Ribosome maturation factor rimP
 gi|9655077|gb|AAF93807.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547881|gb|EAX57965.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121629327|gb|EAX61759.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124114562|gb|EAY33382.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124122456|gb|EAY41199.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126510762|gb|EAZ73356.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519952|gb|EAZ77175.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315463|gb|ABQ20002.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148875344|gb|EDL73479.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149739720|gb|EDM53927.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150421888|gb|EDN13867.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227008710|gb|ACP04922.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227012466|gb|ACP08676.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229332219|gb|EEN97707.1| clustered with transcription termination protein NusA [Vibrio
           cholerae 12129(1)]
 gi|229342165|gb|EEO07161.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TM 11079-80]
 gi|229344250|gb|EEO09225.1| clustered with transcription termination protein NusA [Vibrio
           cholerae RC9]
 gi|229350152|gb|EEO15105.1| clustered with transcription termination protein NusA [Vibrio
           cholerae TMA 21]
 gi|229353802|gb|EEO18738.1| clustered with transcription termination protein NusA [Vibrio
           cholerae B33]
 gi|229357960|gb|EEO22877.1| clustered with transcription termination protein NusA [Vibrio
           cholerae BX 330286]
 gi|229371503|gb|ACQ61926.1| clustered with transcription termination protein NusA [Vibrio
           cholerae MJ-1236]
 gi|254846580|gb|EET24994.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738082|gb|EET93474.1| UPF0090 domain-containing protein [Vibrio cholera CIRS 101]
 gi|262021674|gb|EEY40385.1| UPF0090 domain-containing protein [Vibrio cholerae RC27]
 gi|262030154|gb|EEY48799.1| UPF0090 domain-containing protein [Vibrio cholerae INDRE 91/1]
 gi|262034349|gb|EEY52738.1| UPF0090 domain-containing protein [Vibrio cholerae CT 5369-93]
 gi|297540538|gb|EFH76596.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327483443|gb|AEA77850.1| hypothetical protein VCLMA_A0562 [Vibrio cholerae LMA3894-4]
          Length = 151

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++  +  +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDH-ENGITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 IDGETVAVMVDGQEEH--------FALSNISKANLIP 149


>gi|196247597|ref|ZP_03146299.1| protein of unknown function DUF150 [Geobacillus sp. G11MC16]
 gi|259585816|sp|A4IMD3|RIMP_GEOTN RecName: Full=Ribosome maturation factor rimP
 gi|196212381|gb|EDY07138.1| protein of unknown function DUF150 [Geobacillus sp. G11MC16]
          Length = 157

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ P++ EM    V I  ++  KN  L++F++ DD  + +  C  +S+ 
Sbjct: 1   MSKKVTETVEQLVTPILNEMGLELVDIEYVKEGKNWFLRVFIDSDD-GVDIEQCGVVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+  + DF++  G  V  +       +++  G++
Sbjct: 60  LSEKLDEVDPIPHNYFLEVSSPGAERPLKNEKDFVKAIGKHVYIKTYEPIAGEKQFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                T   L  + RG     +  +AI ++ + SARL V
Sbjct: 120 TAFDGTTVTLSVKDRG----RQKTVAIPYEKVASARLAV 154


>gi|167856226|ref|ZP_02478961.1| hypothetical protein HPS_08460 [Haemophilus parasuis 29755]
 gi|259585812|sp|B8F3J3|RIMP_HAEPS RecName: Full=Ribosome maturation factor rimP
 gi|167852646|gb|EDS23925.1| hypothetical protein HPS_08460 [Haemophilus parasuis 29755]
          Length = 153

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   I+ M F  V +        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLQELVADPIDAMGFELVGVECQRAGRFLTVRLYIDK-EGGVTVDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  G+++   
Sbjct: 63  FDVEDPIADKYNLEVSSPGLDRPLFTLAHYQRFVGREIVVHLRIPMLDRRKWQGELVSVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L+ +   +        A +F ++  A LI 
Sbjct: 123 GDLITLKVDGNLQ--------AFAFGNIQKANLIP 149


>gi|113460962|ref|YP_719029.1| hypothetical protein HS_0819 [Haemophilus somnus 129PT]
 gi|122945308|sp|Q0I3P7|RIMP_HAES1 RecName: Full=Ribosome maturation factor rimP
 gi|112823005|gb|ABI25094.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 153

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 9/155 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++QP +E++      I          +++++++ DG +T+ DC ++S+ +S +
Sbjct: 4   LEDKLQELLQPSVEDLGCELWGIECQRSGRFFTVRLYIDKKDGGVTVDDCADVSRQVSAV 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP+     F  + G  ++  + +   D++K  GK+    
Sbjct: 64  LDVEDPIADKYNLEVSSPGLNRPLFTLKQFENYIGQDISVHLRVPMLDRRKWQGKLEKIE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  + + +  +        F ++  A ++ 
Sbjct: 124 NDMLTLIVDNQPQVLV--------FGNIQKANVVP 150


>gi|304396346|ref|ZP_07378227.1| protein of unknown function DUF150 [Pantoea sp. aB]
 gi|304355855|gb|EFM20221.1| protein of unknown function DUF150 [Pantoea sp. aB]
          Length = 143

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E + +  V I  +  +  +L+I+++ +D  + + DC ++S  +S ++DVE+
Sbjct: 1   MTELVSAPVEALGYELVGIEFVRSRTSILRIYIDSED-GINVDDCADVSHQVSAVMDVED 59

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I         
Sbjct: 60  PITVPYNLEVSSPGLDRPLFTAEHYTRFMGEEVSLVLRMAVQNRRKWQGTIKSVDGEMIT 119

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +  E   E          +  ++  A L+ 
Sbjct: 120 VHVEGSDEV--------FALSNIQKANLVP 141


>gi|259586217|sp|A4VPP2|RIMP_PSEU5 RecName: Full=Ribosome maturation factor rimP
 gi|327482027|gb|AEA85337.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 152

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + ++   I    + ++ LL+++++  +  + + DCE++S+ +S +LD
Sbjct: 6   EQLQALLAPVVEALGYQCWGIEFISQGRHSLLRVYIDHAN-GILIDDCEKVSRQLSGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     ++   G  V  ++      ++   G + G  E 
Sbjct: 65  VEDPISVDYTLEVSSPGMDRPLFTIEQYVAHVGDQVKIKLRSPFEGRRNFQGLLRGVEEQ 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
              +  +          +  +  D +  A +I   +
Sbjct: 125 DVVVLVDD--------HEYLLPIDMIDKANIIPRFD 152


>gi|261856065|ref|YP_003263348.1| hypothetical protein Hneap_1469 [Halothiobacillus neapolitanus c2]
 gi|261836534|gb|ACX96301.1| protein of unknown function DUF150 [Halothiobacillus neapolitanus
           c2]
          Length = 166

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
             +   I +++QPV+E      V        + LL+++++  +  +TL DC ++S A+S 
Sbjct: 2   QKIPESIEALLQPVVEAAGCAWVGGEFRGGPDGLLRVYIDT-EAGVTLDDCTKVSDALSG 60

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+   G YRLEVSSPG++RPM R SDF  + G  V   +      +++  G +   
Sbjct: 61  VLDVEDPFPGFYRLEVSSPGVERPMFRASDFALFIGQKVHVRLHRPLAQRRRFEGIVSAV 120

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 L  E       ++      F  +  A L+ 
Sbjct: 121 DGEQISLSIEG------DQDVFTFPFSEVERANLVF 150


>gi|226329685|ref|ZP_03805203.1| hypothetical protein PROPEN_03595 [Proteus penneri ATCC 35198]
 gi|225202871|gb|EEG85225.1| hypothetical protein PROPEN_03595 [Proteus penneri ATCC 35198]
          Length = 152

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 80/159 (50%), Gaps = 9/159 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   L   +++++   +E + F  V +  +  +   L+I+++ +D  +T+ DC ++S  
Sbjct: 1   MGLSTLEQKLTAMVSAPVEALGFEFVGLEFIRGRESTLRIYIDSED-GITVDDCADVSHQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+ I+  Y LE+SSPG++RP+   + + ++ G   A  + ++  +++K  G I
Sbjct: 60  VSAVLDVEDPIQTVYNLEISSPGLERPLFTATHYEQFIGEEAAIVLRIAMQNRRKWQGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +     +  + + E          +  ++  A L+ 
Sbjct: 120 KSVAGEMITVTVDGKDEV--------FALSNIQKANLVP 150


>gi|89072573|ref|ZP_01159145.1| hypothetical protein SKA34_18649 [Photobacterium sp. SKA34]
 gi|89051677|gb|EAR57130.1| hypothetical protein SKA34_18649 [Photobacterium sp. SKA34]
          Length = 151

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 79/157 (50%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++P +  + F  V +  +    +  L++F++  +  + +  C E+S+ IS
Sbjct: 2   TALETQLTEMLEPSVLALGFELVGLEFIRAGEHSTLRVFIDH-ENGINVDGCAEVSRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH     + ++ G+++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEANIVLKMAMGNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  L+ +   E        + +  ++  A L+ 
Sbjct: 121 VEGELITLKVDGNEE--------SFALSNISKANLVP 149


>gi|91205426|ref|YP_537781.1| hypothetical protein RBE_0611 [Rickettsia bellii RML369-C]
 gi|157827029|ref|YP_001496093.1| hypothetical protein A1I_03485 [Rickettsia bellii OSU 85-389]
 gi|91068970|gb|ABE04692.1| unknown [Rickettsia bellii RML369-C]
 gi|157802333|gb|ABV79056.1| hypothetical protein A1I_03485 [Rickettsia bellii OSU 85-389]
          Length = 180

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 10/171 (5%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEEL 72
           ++     +   I+ +IQ  + +M F  V + +    + +++I ++R DD  +T+ DC + 
Sbjct: 10  KLIMQT-IEQQITDLIQETLSDMGFELVLVRVKGLSSKVVEILIDRLDDQKVTIEDCTKA 68

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S  IS ILDVE++IE  Y LEVSS G++RP+V+  ++ R+ G  V  ++      + +  
Sbjct: 69  SNTISAILDVEDLIEEAYYLEVSSSGVERPLVKFENYKRFIGREVKIKLKELLNGRSRYQ 128

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           G I+   +   +L+ E          ++ I++D + SA L++T+E+ +  L
Sbjct: 129 GTIIEAKDDKVYLKWED--------QEVIINYDLIKSANLVLTEEMFKKLL 171


>gi|53729158|ref|ZP_00133985.2| COG0779: Uncharacterized protein conserved in bacteria
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208119|ref|YP_001053344.1| hypothetical protein APL_0637 [Actinobacillus pleuropneumoniae L20]
 gi|165976049|ref|YP_001651642.1| hypothetical protein APJL_0628 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|190149947|ref|YP_001968472.1| hypothetical protein APP7_0678 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307249836|ref|ZP_07531812.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307261094|ref|ZP_07542773.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307263275|ref|ZP_07544893.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|167016737|sp|A3N003|RIMP_ACTP2 RecName: Full=Ribosome maturation factor rimP
 gi|226707976|sp|B0BNR3|RIMP_ACTPJ RecName: Full=Ribosome maturation factor rimP
 gi|226708014|sp|B3H161|RIMP_ACTP7 RecName: Full=Ribosome maturation factor rimP
 gi|126096911|gb|ABN73739.1| hypothetical protein APL_0637 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|165876150|gb|ABY69198.1| hypothetical protein APJL_0628 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189915078|gb|ACE61330.1| hypothetical protein APP7_0678 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306858138|gb|EFM90218.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306869226|gb|EFN01024.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871337|gb|EFN03063.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 153

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE M F  V I        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEELVSDTIESMGFELVGIECQRAGRFLTVRLYIDK-EGGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKLESVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  +              +F ++  A L+ 
Sbjct: 123 GDLITLTVDNE--------TRQFAFGNIQKANLVP 149


>gi|149189796|ref|ZP_01868077.1| hypothetical protein VSAK1_11003 [Vibrio shilonii AK1]
 gi|148836445|gb|EDL53401.1| hypothetical protein VSAK1_11003 [Vibrio shilonii AK1]
          Length = 151

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +E + +  V +  +    +  L+I+++ +D  +T+  C E+S  +S
Sbjct: 2   TGLERQLTELLEAPVEALGYELVGLEFIRAGEHSTLRIYIDHED-GITVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGTIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  +   E         ++  ++  A LI 
Sbjct: 121 IEGETVTIIVDGNEE--------EMALSNISKANLIP 149


>gi|332992816|gb|AEF02871.1| hypothetical protein ambt_06680 [Alteromonas sp. SN2]
          Length = 152

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 81/159 (50%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ ++ P +E + F  V I  +   K+ +L++F++  +  +++ +C ++S  +S 
Sbjct: 3   KLEEKLTEMLNPGVEALGFELVGIEFVRAGKHSILRVFIDH-ENGISVDNCADVSHQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILDVE+ I   Y LEVSSPG+DRP+ ++  ++   G VV   + +   D++   GK++  
Sbjct: 62  ILDVEDPISTEYNLEVSSPGMDRPLFKEKHYVDSVGEVVQVRLSMPMDDRRNFKGKVLAC 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                 +E +          Q  ++  ++    ++ T E
Sbjct: 122 DNGVVSIEVDG--------QQFQLAVANIEKGNVVPTFE 152


>gi|237808992|ref|YP_002893432.1| hypothetical protein Tola_2248 [Tolumonas auensis DSM 9187]
 gi|259645129|sp|C4L8X6|RIMP_TOLAT RecName: Full=Ribosome maturation factor rimP
 gi|237501253|gb|ACQ93846.1| protein of unknown function DUF150 [Tolumonas auensis DSM 9187]
          Length = 152

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++   I  + +    I  +   K+  L+++++  +  +++ DC E S  +S +
Sbjct: 4   LEQRLTELLDAPIVALGYELWGIEFIRAGKHSTLRVYIDHAN-GISVDDCAEASHQVSAL 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+++   F R+ G V    + ++  +++K  G I    
Sbjct: 63  LDVEDPITTEYYLEVSSPGMDRPLLKPEHFARYIGQVATVTLRMAVNNRRKYKGTIKQVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                L  + R E         ++F ++  A LI   +
Sbjct: 123 GEMITLTIDGRDEI--------LAFANIQQANLIPNFD 152


>gi|228954093|ref|ZP_04116122.1| hypothetical protein bthur0006_34650 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229191986|ref|ZP_04318956.1| hypothetical protein bcere0002_36430 [Bacillus cereus ATCC 10876]
 gi|228591537|gb|EEK49386.1| hypothetical protein bcere0002_36430 [Bacillus cereus ATCC 10876]
 gi|228805659|gb|EEM52249.1| hypothetical protein bthur0006_34650 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 174

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 15  RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGA 73

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 74  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 133

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I IS D + +ARL VT
Sbjct: 134 EGKLLSYDGTTITLLLTIKTRKK----EIQISMDKVANARLAVT 173


>gi|254447077|ref|ZP_05060544.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
 gi|198263216|gb|EDY87494.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
          Length = 159

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 86/154 (55%), Gaps = 10/154 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A    S+I+PV++++ +  V +      +  +L ++++RD+  + + DC ++S+ +S +L
Sbjct: 5   ARKEWSLIEPVVQDLGYELVGVDFRANASPAVLCVYIDRDE-GVNIDDCAKISREVSAVL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+ R+SDF+++ GH+   ++ +   +++   G++ G  +
Sbjct: 64  DVEDPITSAYNLEVSSPGLDRPLFRESDFVKYKGHLAKVKLSIPYEERRNFKGQLNGVED 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               L  +          +  + ++ +  A L+ 
Sbjct: 124 GMVLLIVDNE--------EYLLPYEQIEKANLVP 149


>gi|307245493|ref|ZP_07527580.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254447|ref|ZP_07536284.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258906|ref|ZP_07540637.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853552|gb|EFM85770.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862588|gb|EFM94545.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866930|gb|EFM98787.1| Ribosome maturation factor rimP [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 153

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE M    V I        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEELVSDTIESMGCELVGIECQRAGRFLTVRLYIDK-EGGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAHYQRFIGQEIVIHLRIPMFDRRKWQGKLESVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  +              +F ++  A L+ 
Sbjct: 123 GDLITLTVDNEAR--------QFAFGNIQKANLVP 149


>gi|83589894|ref|YP_429903.1| hypothetical protein Moth_1046 [Moorella thermoacetica ATCC 39073]
 gi|91207996|sp|Q2RJM9|RIMP_MOOTA RecName: Full=Ribosome maturation factor rimP
 gi|83572808|gb|ABC19360.1| Protein of unknown function DUF150 [Moorella thermoacetica ATCC
           39073]
          Length = 158

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             L   I  +++P++  M +  V +    E    +L++F++R +  + L DCE++S+ +S
Sbjct: 2   SKLTALIQELVEPLLTPMGYELVDLQYGREGGRYILRLFIDRPE-GIGLDDCEQVSRVVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD ++ I   Y LEVSSPG++RP+ +++DF R+ G  V          ++   G+++G
Sbjct: 61  ALLDEKDPIPHSYYLEVSSPGLERPLKKEADFNRFAGRKVKLRTFAPINGQRHFQGRLLG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             +    +  E           +AI  + + +ARL+  
Sbjct: 121 YQDGQVRMHLE-------EGWDLAIPLEQVATARLVFD 151


>gi|89095216|ref|ZP_01168139.1| YhbC-like protein [Oceanospirillum sp. MED92]
 gi|89080513|gb|EAR59762.1| YhbC-like protein [Oceanospirillum sp. MED92]
          Length = 151

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 75/161 (46%), Gaps = 13/161 (8%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELS 73
           +   M L   +  +I+P +  + F    I    + K+  L+++++  +  + + DC ++S
Sbjct: 1   MSAKMKL---LHELIEPSVSALGFELWGIEFLSQGKHSTLRVYIDS-ENGINVDDCAKVS 56

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             +S I+DVE+ I G+Y LEVSSPG++RP+     F  + G  +   + ++   ++K  G
Sbjct: 57  HQVSGIMDVEDPIAGNYTLEVSSPGMERPLFTLEQFAAYAGSEIQIRLRVAFEGRRKFKG 116

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            + G       +  +          +  +  + +  A +I 
Sbjct: 117 VLNGVEGDDVLVVVDNE--------EYMLPIEYIDRANIIP 149


>gi|114800120|ref|YP_758845.1| hypothetical protein HNE_0111 [Hyphomonas neptunium ATCC 15444]
 gi|123129251|sp|Q0C5Z8|RIMP_HYPNA RecName: Full=Ribosome maturation factor rimP
 gi|114740294|gb|ABI78419.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 199

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 8/169 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELS 73
           +         + S++QPV E +    V++ +   +   LQI  ER  G    + DC  LS
Sbjct: 1   MIVLTEQERRLLSLVQPVAEGLGMEIVRLRVQGGRRPHLQIMAERAGGAPTGIEDCARLS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +SP+L+  + I   Y LEVS+PGIDRP+ R  DF RW GH V  E+      +++  G
Sbjct: 61  RGMSPVLEAADPISEAYTLEVSTPGIDRPLTRPGDFARWIGHAVRIELARPIDGRRRFTG 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
            I G    G  +E +   +      ++         A L++TDEL+ A+
Sbjct: 121 TITGEDNDGAHIELDDETKLVAAVHEM-------SRASLVLTDELIEAA 162


>gi|331016646|gb|EGH96702.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 158

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I      K+ +L+I++++ +G + + DC  +S+ IS +LD
Sbjct: 12  EQLQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDK-EGGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G  E 
Sbjct: 71  VEDPISTEYTLEVSSPGMERPLFTIEQFALYAGEQVRIKLRSPFEGRRNFQGLLRGVEEQ 130

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
              +  E          +  +  D +  A +I T +
Sbjct: 131 DVVVHVED--------HEFLLPIDLIDKANIIPTFD 158


>gi|332141180|ref|YP_004426918.1| hypothetical protein MADE_1008910 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|259585705|sp|B4RXT6|RIMP_ALTMD RecName: Full=Ribosome maturation factor rimP
 gi|327551202|gb|AEA97920.1| hypothetical protein MADE_1008910 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 152

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 82/159 (51%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +++P +E + F  V I  +   K+ +L++F++  +  +T+ DC ++S  +S 
Sbjct: 3   KLEEKLTEMLEPGVEALGFELVGIEFVRAGKHSILRVFIDH-ENGITVDDCADVSHQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILDVE+ I   Y LEVSSPG+DRP+ ++  ++   G VV   + +   D++   GK++  
Sbjct: 62  ILDVEDPISTEYNLEVSSPGMDRPLFKEKHYIESVGEVVQVRLSMPMDDRRNFKGKVLAC 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                 +E +          Q  ++  ++    ++ T +
Sbjct: 122 ENGMVSIEVDG--------QQFQLAVANIEKGNVVPTFD 152


>gi|77165587|ref|YP_344112.1| hypothetical protein Noc_2122 [Nitrosococcus oceani ATCC 19707]
 gi|254434762|ref|ZP_05048270.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
 gi|91208399|sp|Q3J9B4|RIMP_NITOC RecName: Full=Ribosome maturation factor rimP
 gi|76883901|gb|ABA58582.1| Protein of unknown function DUF150 [Nitrosococcus oceani ATCC
           19707]
 gi|207091095|gb|EDZ68366.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
          Length = 151

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE--EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
              IS +++PV+  + +  V +  L    K  LL+I+++     +T+ DCE  S  IS +
Sbjct: 4   DRRISELVEPVVAALGYELVGVERLSSVGKGALLRIYIDTP-SGITIDDCERASHQISAL 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE ++   Y LE+SSPG++RP+  +  F R+ G   +  +      +++  G + G  
Sbjct: 63  LDVEELMASAYTLEISSPGLNRPLFTEEHFKRFTGVEASITLSKPLNGRREFKGLLRGIR 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +             +  +  + +  ARL+ 
Sbjct: 123 GDRVVILVAGE--------EFELPLEGIKKARLVP 149


>gi|229086369|ref|ZP_04218546.1| hypothetical protein bcere0022_29560 [Bacillus cereus Rock3-44]
 gi|228696981|gb|EEL49789.1| hypothetical protein bcere0022_29560 [Bacillus cereus Rock3-44]
          Length = 164

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++  K+  L++F++  +  + + +C  
Sbjct: 5   RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGKDWFLRVFIDS-EKGVDIEECGA 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 64  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 124 EGKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|320186659|gb|EFW61383.1| hypothetical protein SGF_01107 [Shigella flexneri CDC 796-83]
 gi|332090719|gb|EGI95813.1| hypothetical protein SB359474_3714 [Shigella boydii 3594-74]
          Length = 140

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +      L+I+++ +D  + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGHTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|209920647|ref|YP_002294731.1| hypothetical protein ECSE_3456 [Escherichia coli SE11]
 gi|215488488|ref|YP_002330919.1| hypothetical protein E2348C_3451 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|253771994|ref|YP_003034825.1| hypothetical protein ECBD_0570 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|260845985|ref|YP_003223763.1| hypothetical protein ECO103_3919 [Escherichia coli O103:H2 str.
           12009]
 gi|260857299|ref|YP_003231190.1| hypothetical protein ECO26_4276 [Escherichia coli O26:H11 str.
           11368]
 gi|260869922|ref|YP_003236324.1| hypothetical protein ECO111_3994 [Escherichia coli O111:H- str.
           11128]
 gi|261228182|ref|ZP_05942463.1| hypothetical protein EscherichiacoliO157_26753 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255038|ref|ZP_05947571.1| hypothetical protein EscherichiacoliO157EcO_04328 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|297519523|ref|ZP_06937909.1| hypothetical protein EcolOP_17907 [Escherichia coli OP50]
 gi|300817578|ref|ZP_07097794.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300823867|ref|ZP_07103991.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300897934|ref|ZP_07116313.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300904356|ref|ZP_07122209.1| hypothetical protein HMPREF9536_02438 [Escherichia coli MS 84-1]
 gi|300918925|ref|ZP_07135484.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300926091|ref|ZP_07141909.1| hypothetical protein HMPREF9548_04117 [Escherichia coli MS 182-1]
 gi|300929860|ref|ZP_07145306.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300938080|ref|ZP_07152858.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300948820|ref|ZP_07162888.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300955756|ref|ZP_07168101.1| hypothetical protein HMPREF9547_01616 [Escherichia coli MS 175-1]
 gi|300977837|ref|ZP_07174077.1| hypothetical protein HMPREF9553_01175 [Escherichia coli MS 200-1]
 gi|300990770|ref|ZP_07179342.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301022025|ref|ZP_07185968.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|301025985|ref|ZP_07189467.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|301047987|ref|ZP_07195029.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|301301774|ref|ZP_07207908.1| hypothetical protein HMPREF9347_00334 [Escherichia coli MS 124-1]
 gi|301326407|ref|ZP_07219761.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|301644881|ref|ZP_07244853.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|306816486|ref|ZP_07450618.1| hypothetical protein ECNC101_07709 [Escherichia coli NC101]
 gi|307139857|ref|ZP_07499213.1| hypothetical protein EcolH7_17218 [Escherichia coli H736]
 gi|309785497|ref|ZP_07680128.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|309793748|ref|ZP_07688174.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|312972557|ref|ZP_07786730.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|42143|emb|CAA25199.1| unnamed protein product [Escherichia coli]
 gi|169753506|gb|ACA76205.1| protein of unknown function DUF150 [Escherichia coli ATCC 8739]
 gi|209913906|dbj|BAG78980.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|215266560|emb|CAS10999.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|253323038|gb|ACT27640.1| protein of unknown function DUF150 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|257755948|dbj|BAI27450.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257761132|dbj|BAI32629.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|257766278|dbj|BAI37773.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|260447801|gb|ACX38223.1| protein of unknown function DUF150 [Escherichia coli DH1]
 gi|281180214|dbj|BAI56544.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|284923194|emb|CBG36288.1| conserved hypothetical protein [Escherichia coli 042]
 gi|299879880|gb|EFI88091.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|300300130|gb|EFJ56515.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300308214|gb|EFJ62734.1| hypothetical protein HMPREF9553_01175 [Escherichia coli MS 200-1]
 gi|300317389|gb|EFJ67173.1| hypothetical protein HMPREF9547_01616 [Escherichia coli MS 175-1]
 gi|300358364|gb|EFJ74234.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300397740|gb|EFJ81278.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300403707|gb|EFJ87245.1| hypothetical protein HMPREF9536_02438 [Escherichia coli MS 84-1]
 gi|300407078|gb|EFJ90616.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|300413951|gb|EFJ97261.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300417856|gb|EFK01167.1| hypothetical protein HMPREF9548_04117 [Escherichia coli MS 182-1]
 gi|300451709|gb|EFK15329.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300456940|gb|EFK20433.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300462222|gb|EFK25715.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300523635|gb|EFK44704.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300529876|gb|EFK50938.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300842755|gb|EFK70515.1| hypothetical protein HMPREF9347_00334 [Escherichia coli MS 124-1]
 gi|300846896|gb|EFK74656.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|301076826|gb|EFK91632.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|305850051|gb|EFM50510.1| hypothetical protein ECNC101_07709 [Escherichia coli NC101]
 gi|307625229|gb|ADN69533.1| hypothetical protein UM146_00520 [Escherichia coli UM146]
 gi|308122705|gb|EFO59967.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|308926617|gb|EFP72093.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|310332499|gb|EFP99712.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|312947729|gb|ADR28556.1| hypothetical protein NRG857_15730 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315062478|gb|ADT76805.1| conserved hypothetical protein [Escherichia coli W]
 gi|315257096|gb|EFU37064.1| 15 kDa protein [Escherichia coli MS 85-1]
 gi|315288928|gb|EFU48326.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|315294915|gb|EFU54254.1| conserved hypothetical protein [Escherichia coli MS 153-1]
 gi|315297878|gb|EFU57148.1| conserved hypothetical protein [Escherichia coli MS 16-3]
 gi|320175534|gb|EFW50630.1| hypothetical protein SDB_01982 [Shigella dysenteriae CDC 74-1112]
 gi|320189524|gb|EFW64183.1| hypothetical protein ECoD_04531 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320202084|gb|EFW76659.1| hypothetical protein ECoL_00712 [Escherichia coli EC4100B]
 gi|320640242|gb|EFX09814.1| ribosome maturation protein RimP [Escherichia coli O157:H7 str.
           G5101]
 gi|320645539|gb|EFX14548.1| ribosome maturation protein RimP [Escherichia coli O157:H- str.
           493-89]
 gi|320650849|gb|EFX19306.1| ribosome maturation protein RimP [Escherichia coli O157:H- str. H
           2687]
 gi|320656230|gb|EFX24142.1| ribosome maturation protein RimP [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661920|gb|EFX29328.1| ribosome maturation protein RimP [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666755|gb|EFX33734.1| ribosome maturation protein RimP [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323154384|gb|EFZ40585.1| hypothetical protein ECEPECA14_3686 [Escherichia coli EPECa14]
 gi|323173569|gb|EFZ59198.1| hypothetical protein ECLT68_1886 [Escherichia coli LT-68]
 gi|323178883|gb|EFZ64459.1| hypothetical protein ECOK1180_2616 [Escherichia coli 1180]
 gi|323183125|gb|EFZ68523.1| hypothetical protein ECOK1357_3540 [Escherichia coli 1357]
 gi|324008769|gb|EGB77988.1| hypothetical protein HMPREF9532_01528 [Escherichia coli MS 57-2]
 gi|324012104|gb|EGB81323.1| hypothetical protein HMPREF9533_03857 [Escherichia coli MS 60-1]
 gi|324018306|gb|EGB87525.1| hypothetical protein HMPREF9542_03022 [Escherichia coli MS 117-3]
 gi|326337872|gb|EGD61706.1| hypothetical protein ECF_05498 [Escherichia coli O157:H7 str. 1125]
 gi|326347441|gb|EGD71166.1| hypothetical protein ECoA_00752 [Escherichia coli O157:H7 str.
           1044]
 gi|330909226|gb|EGH37740.1| clustered with transcription termination protein NusA [Escherichia
           coli AA86]
 gi|332086489|gb|EGI91636.1| hypothetical protein SD15574_3713 [Shigella dysenteriae 155-74]
 gi|332345127|gb|AEE58461.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|332754726|gb|EGJ85092.1| hypothetical protein SF274771_3795 [Shigella flexneri 2747-71]
 gi|332765167|gb|EGJ95394.1| ribosome maturation protein [Shigella flexneri 2930-71]
 gi|332998812|gb|EGK18408.1| hypothetical protein SFVA6_4094 [Shigella flexneri VA-6]
 gi|332999249|gb|EGK18835.1| hypothetical protein SFK272_3978 [Shigella flexneri K-272]
 gi|333000398|gb|EGK19981.1| hypothetical protein SFK218_4200 [Shigella flexneri K-218]
 gi|333014539|gb|EGK33886.1| hypothetical protein SFK304_4023 [Shigella flexneri K-304]
          Length = 140

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|270158100|ref|ZP_06186757.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|289163635|ref|YP_003453773.1| hypothetical protein LLO_0291 [Legionella longbeachae NSW150]
 gi|269990125|gb|EEZ96379.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|288856808|emb|CBJ10619.1| putative conserved hypothetical protein [Legionella longbeachae
           NSW150]
          Length = 147

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++  ++ P I +M +         + ++ LL+I++++ D  +T+ DCE +S  +S +
Sbjct: 2   IQDELEHLLAPSIADMGYELWGCEYLSQGRHSLLRIYIDKSD-GITIDDCEAVSHQVSAL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I G+Y LEVSSPGI RP+ +   + R+ G  V  +       K+KL+G ++  S
Sbjct: 61  LDVEDPIHGNYSLEVSSPGIPRPLFKSWQYQRYLGQEVQVKTFKPVCGKRKLLGTLVSAS 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ET   L      +         + F +++ A L
Sbjct: 121 ETSIVLNLGNEDQ--------ELLFSNIVKASL 145


>gi|260771816|ref|ZP_05880734.1| UPF0090 domain-containing protein [Vibrio metschnikovii CIP 69.14]
 gi|260613108|gb|EEX38309.1| UPF0090 domain-containing protein [Vibrio metschnikovii CIP 69.14]
          Length = 151

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +    +  L+I+++  +  +T+  C E+S  +S
Sbjct: 2   TGLERQLTEMLEAPVAATGYELVGLEFVRAGEHSTLRIYIDH-ENGITVDACAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 VEGETVTVIADGQEEY--------FALSNIAKANLIP 149


>gi|149375757|ref|ZP_01893525.1| hypothetical protein MDG893_04092 [Marinobacter algicola DG893]
 gi|149359882|gb|EDM48338.1| hypothetical protein MDG893_04092 [Marinobacter algicola DG893]
          Length = 153

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 81/156 (51%), Gaps = 9/156 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++E + +    I    +  + LL+IF++  +  + + DCE++S+  S ++D
Sbjct: 6   KQLEELLRPIVEGLGYEFWGIEFRSQGHHSLLRIFIDDAENGIGIEDCEKVSRQASGVMD 65

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I+  Y LEVSSPG+DRP+ R   +  + GH V  ++ ++   ++K  G I G    
Sbjct: 66  VEDPIQTEYTLEVSSPGMDRPLFRLEQYEAFAGHQVQIKLRMAFEGRRKFQGLIKGIEG- 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                        +++ +  + FDS+  A ++   E
Sbjct: 125 -------DDVVVVVDDHEYLLPFDSIEKANIVPVFE 153


>gi|326794268|ref|YP_004312088.1| ribosome maturation factor rimP [Marinomonas mediterranea MMB-1]
 gi|326545032|gb|ADZ90252.1| Ribosome maturation factor rimP [Marinomonas mediterranea MMB-1]
          Length = 153

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 10/152 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           I  +I+PV+E + F+   +    + K+ +L+IF+E D +  + + DC ++S+ +S ILDV
Sbjct: 8   IEELIRPVVEGLGFQFWGMEYISQGKHSVLRIFIETDKEKGIDVEDCAQVSRQVSSILDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G Y LEVSSPG+DRP+   S +  + G VVA ++ +    ++K  G++ G     
Sbjct: 68  EDPITGEYNLEVSSPGLDRPLFELSQYESYVGSVVALKLRVPFDGRRKFKGQLTGVEGDE 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +  ++         +  +  + +  A ++ 
Sbjct: 128 VVILVDQE--------EYLLPIELIEKANIVP 151


>gi|261212248|ref|ZP_05926534.1| UPF0090 domain-containing protein [Vibrio sp. RC341]
 gi|260838856|gb|EEX65507.1| UPF0090 domain-containing protein [Vibrio sp. RC341]
          Length = 151

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 80/157 (50%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++  +  +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDH-ENGITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGFIQA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 IDGETVAVMVDGQEEH--------FALSNISKANLIP 149


>gi|254295402|ref|YP_003061425.1| hypothetical protein Hbal_3060 [Hirschia baltica ATCC 49814]
 gi|254043933|gb|ACT60728.1| protein of unknown function DUF150 [Hirschia baltica ATCC 49814]
          Length = 203

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 7/172 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
             +   I  +I+P    +    V++ ++     +LQI  E+ DG M + DC +LS+AI P
Sbjct: 5   SEIEKRILDIIEPEATSIGLEIVRVRMMGANTPILQIMAEKPDGTMDVEDCAKLSRAIGP 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I   Y LEVSSPGIDRP+ R+ DF  W  + V  E+ +    +++  G I   
Sbjct: 65  VLDVEDPIHSEYNLEVSSPGIDRPLTREGDFANWKTYEVRIELGIPIDGRRRFHGTITDE 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYA 190
                 L+ +   +         IS   ++ A L++ D L+  + +   +  
Sbjct: 125 VNGIVSLDLKDGSKA-------EISIVDMVKASLVMNDRLIEEAQSRGQAPE 169


>gi|254427945|ref|ZP_05041652.1| conserved hypothetical protein [Alcanivorax sp. DG881]
 gi|196194114|gb|EDX89073.1| conserved hypothetical protein [Alcanivorax sp. DG881]
          Length = 151

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 79/156 (50%), Gaps = 9/156 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              ++ ++ PV+E++ F    +  ++ +  +L++F++  D  +++ +C  +S  +S +LD
Sbjct: 5   TEQLTELLAPVVEDLGFVLWGVEYIQGRGAVLRVFIDHAD-GISVDNCAAVSHEVSGVLD 63

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I G Y LEVSSPG+DRPM   + ++ + G  V  +++     K+K+   I+     
Sbjct: 64  VEDPISGEYNLEVSSPGMDRPMFEIAQYVDYIGEDVQLKLLAPVSGKRKMTAAIVAVDGD 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
              +E +           + + +  +  ARL    +
Sbjct: 124 TLVVELDGE--------TLRVPYSQVDRARLQPRFD 151


>gi|260771175|ref|ZP_05880102.1| UPF0090 domain-containing protein [Vibrio furnissii CIP 102972]
 gi|260613772|gb|EEX38964.1| UPF0090 domain-containing protein [Vibrio furnissii CIP 102972]
 gi|315179219|gb|ADT86133.1| hypothetical protein vfu_A00938 [Vibrio furnissii NCTC 11218]
          Length = 151

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 82/157 (52%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ ++   +    +  V +  +   ++  L+I+++  +  +T+ DC E+S  +S
Sbjct: 2   TGLERQLTEMLDAPVVASGYELVGLEFVRAGQHSTLRIYIDH-ENGITVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G+I+G
Sbjct: 61  AVLDVEDPITVAYNLEVSSPGLERPLFKAAHYEQFKGHEVSIVLKMAVGNRRKWKGEILG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 ADGETINVMVDGQEEH--------FALSNISKANLIP 149


>gi|258620311|ref|ZP_05715349.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258624682|ref|ZP_05719616.1| UPF0090 protein [Vibrio mimicus VM603]
 gi|262163945|ref|ZP_06031684.1| UPF0090 domain-containing protein [Vibrio mimicus VM223]
 gi|262172283|ref|ZP_06039961.1| UPF0090 domain-containing protein [Vibrio mimicus MB-451]
 gi|258582969|gb|EEW07784.1| UPF0090 protein [Vibrio mimicus VM603]
 gi|258587190|gb|EEW11901.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|261893359|gb|EEY39345.1| UPF0090 domain-containing protein [Vibrio mimicus MB-451]
 gi|262027473|gb|EEY46139.1| UPF0090 domain-containing protein [Vibrio mimicus VM223]
          Length = 151

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 80/157 (50%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++  +  +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDH-ENGITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 IEGETVAVMVDGQEEH--------FALSNISKANLIP 149


>gi|258516335|ref|YP_003192557.1| hypothetical protein Dtox_3192 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780040|gb|ACV63934.1| protein of unknown function DUF150 [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 153

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 10/161 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                LA  +  ++ PV+EEM+   V +  ++E +   L+IF+++  G + + DC+ +SQ
Sbjct: 1   MAKNKLADIVEGLVAPVVEEMAMELVDVEYVKEGSQWYLRIFIDK-TGGIFVDDCQAVSQ 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ++D ++ I   Y LEVSSPG+DRP+ + +D+ R+ G+ V          K+   G+
Sbjct: 60  KVSRLMDEKDPIPHAYILEVSSPGLDRPLKKAADYERFCGYEVVVTTYAPFNGKKSFSGR 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           + G SE G  +  +          +  I  D + SARL V 
Sbjct: 120 LDGLSEQGVIINVDG--------TEYVIPVDQVASARLAVD 152


>gi|297580767|ref|ZP_06942693.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535183|gb|EFH74018.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 151

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ +++  +    +  V +  +   ++  L+IF++  +  +T+ DC E+S+ +S
Sbjct: 2   TGLERQLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFIDH-ENGITVEDCAEVSRQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG+++P+ + + + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVLDVEDPISVVYNLEVSSPGLEKPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  + + E          +  ++  A LI 
Sbjct: 121 IDGETVAVMVDGQEEH--------FALSNISKANLIP 149


>gi|284006666|emb|CBA71928.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 150

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 78/154 (50%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++S+I   +E + F  V +  +  +   L+++++  +  +T+ DC ++S  +S +L
Sbjct: 4   LEQKLTSMISVPVEALGFEFVGLEFIRARVSTLRVYIDN-ENGVTVDDCADVSHQVSAVL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LE+SSPG++RP+   + + R+ G  V   + ++  +++K  G I   ++
Sbjct: 63  DVEDPISVLYNLEISSPGLERPLFTVAHYQRFIGKEVNLILRIAMQNRRKWQGIIKAVND 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +  + + E          +  ++  A L+ 
Sbjct: 123 EMITVTVDGKDEV--------FALKNIQKANLVP 148


>gi|127513757|ref|YP_001094954.1| hypothetical protein Shew_2829 [Shewanella loihica PV-4]
 gi|126639052|gb|ABO24695.1| protein of unknown function DUF150 [Shewanella loihica PV-4]
          Length = 161

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 10/161 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEEL 72
           R      L   +  ++   +E +      +  +   K+ +L+++++  +  + + DC ++
Sbjct: 7   RGVTLATLESKLEQMLIAPVEALGHSLWGLEYVQAGKHSVLRVYIDN-ENGIFIDDCADV 65

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ IS +LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V  ++ +     + L 
Sbjct: 66  SRQISAVLDVEDPISTEYTLEVSSPGVDRPLFTAEQYARYLGETVKVQLTMPVAGSRNLK 125

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G + G       L  +          ++ I+ D++    LI
Sbjct: 126 GTVAGVEGQMLTLTVDG--------NELIIALDNIRKGNLI 158


>gi|228916454|ref|ZP_04080020.1| hypothetical protein bthur0012_36690 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228928865|ref|ZP_04091897.1| hypothetical protein bthur0010_35570 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228935131|ref|ZP_04097958.1| hypothetical protein bthur0009_35840 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228947536|ref|ZP_04109826.1| hypothetical protein bthur0007_36640 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228986960|ref|ZP_04147086.1| hypothetical protein bthur0001_36350 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229092857|ref|ZP_04223991.1| hypothetical protein bcere0021_36040 [Bacillus cereus Rock3-42]
 gi|229123330|ref|ZP_04252534.1| hypothetical protein bcere0016_36190 [Bacillus cereus 95/8201]
 gi|229140458|ref|ZP_04269013.1| hypothetical protein bcere0013_35570 [Bacillus cereus BDRD-ST26]
 gi|229157393|ref|ZP_04285471.1| hypothetical protein bcere0010_35760 [Bacillus cereus ATCC 4342]
 gi|229186054|ref|ZP_04313224.1| hypothetical protein bcere0004_36010 [Bacillus cereus BGSC 6E1]
 gi|229197927|ref|ZP_04324643.1| hypothetical protein bcere0001_34630 [Bacillus cereus m1293]
 gi|228585645|gb|EEK43747.1| hypothetical protein bcere0001_34630 [Bacillus cereus m1293]
 gi|228597473|gb|EEK55123.1| hypothetical protein bcere0004_36010 [Bacillus cereus BGSC 6E1]
 gi|228626120|gb|EEK82869.1| hypothetical protein bcere0010_35760 [Bacillus cereus ATCC 4342]
 gi|228643019|gb|EEK99295.1| hypothetical protein bcere0013_35570 [Bacillus cereus BDRD-ST26]
 gi|228660106|gb|EEL15742.1| hypothetical protein bcere0016_36190 [Bacillus cereus 95/8201]
 gi|228690479|gb|EEL44262.1| hypothetical protein bcere0021_36040 [Bacillus cereus Rock3-42]
 gi|228772738|gb|EEM21178.1| hypothetical protein bthur0001_36350 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228812056|gb|EEM58387.1| hypothetical protein bthur0007_36640 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228824496|gb|EEM70301.1| hypothetical protein bthur0009_35840 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228830672|gb|EEM76277.1| hypothetical protein bthur0010_35570 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228843033|gb|EEM88115.1| hypothetical protein bthur0012_36690 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 164

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 5   RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGA 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 64  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 124 EGKMLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|26991397|ref|NP_746822.1| hypothetical protein PP_4714 [Pseudomonas putida KT2440]
 gi|148549781|ref|YP_001269883.1| hypothetical protein Pput_4579 [Pseudomonas putida F1]
 gi|259586189|sp|A5W989|RIMP_PSEP1 RecName: Full=Ribosome maturation factor rimP
 gi|24986466|gb|AAN70286.1|AE016669_4 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|148513839|gb|ABQ80699.1| protein of unknown function DUF150 [Pseudomonas putida F1]
 gi|313500622|gb|ADR61988.1| Ribosome maturation factor rimP [Pseudomonas putida BIRD-1]
          Length = 169

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 12/174 (6%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN 63
            +LHS +E            + +++ PV+E + ++   I  +   K+ +L+I++++ +G 
Sbjct: 7   FYLHSMHEG--VQVSSKLEQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDK-EGG 63

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + + DCE +S+  S ILDVE+ I   Y LEVSSPG+DRP+     F    G  V  ++  
Sbjct: 64  ILVDDCEAVSRQASAILDVEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKLRS 123

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
               ++   G + G         +E+     ++  +  +  DS+  A +I + +
Sbjct: 124 PFEGRRNFQGLLRG--------VEEQDVVVQVDNQEFLLPIDSIDKANIIPSFD 169


>gi|54307813|ref|YP_128833.1| hypothetical protein PBPRA0610 [Photobacterium profundum SS9]
 gi|90412483|ref|ZP_01220486.1| hypothetical protein P3TCK_13963 [Photobacterium profundum 3TCK]
 gi|51316622|sp|Q6LUJ4|RIMP_PHOPR RecName: Full=Ribosome maturation factor rimP
 gi|46912236|emb|CAG19031.1| conserved hypothetical protein [Photobacterium profundum SS9]
 gi|90326520|gb|EAS42926.1| hypothetical protein P3TCK_13963 [Photobacterium profundum 3TCK]
          Length = 151

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ +++  +    +  V +  +    +  L++FV+  +  + + DC E S+ IS
Sbjct: 2   TALEMQLTELLEASVNASGYELVGLEFIRAGEHSTLRVFVDH-ENGINVEDCAEASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ + + + ++ GH V   + ++  +++K  G I+ 
Sbjct: 61  AVMDVEDPITVAYHLEVSSPGLERPLFKAAHYQQFVGHEVNLVLKMAMNNRRKWKGDIVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  L+ +   E          +  ++  A LI 
Sbjct: 121 VEGELITLKVDGNDE--------TFALSNISKANLIP 149


>gi|300113655|ref|YP_003760230.1| hypothetical protein Nwat_0966 [Nitrosococcus watsonii C-113]
 gi|299539592|gb|ADJ27909.1| protein of unknown function DUF150 [Nitrosococcus watsonii C-113]
          Length = 151

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 11/155 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE--EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
              IS ++ PV+  + +  V +  L    K +LL+I+++     +T+ DCE  S  IS +
Sbjct: 4   DKRISKLVGPVVAALGYELVGVERLSSVGKGVLLRIYIDAP-SGVTVNDCERTSHQISAL 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE  +   Y LE+SSPG+DRP+  +  F R+ G   +  +      +++  G + G  
Sbjct: 63  LDVEEPMASAYTLEISSPGLDRPLFTEEHFKRFTGVEASITLSEPLNGRREFKGLLQGIR 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                +             +  +  + +  ARLI 
Sbjct: 123 GDRVVILVAGE--------EFELPLEGIKKARLIP 149


>gi|294634513|ref|ZP_06713048.1| hypothetical protein EDWATA_00308 [Edwardsiella tarda ATCC 23685]
 gi|291092027|gb|EFE24588.1| hypothetical protein EDWATA_00308 [Edwardsiella tarda ATCC 23685]
          Length = 140

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  ++  L+I+++ ++  +T+ DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRHSTLRIYIDSEE-GITVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     + R+    V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGMDRPLFTAEHYTRFLNEEVTLVLRMAMQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           + + E          +  ++  A L+ 
Sbjct: 120 DGKDEV--------FALSNVQKANLVP 138


>gi|78358200|ref|YP_389649.1| hypothetical protein Dde_3160 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|91208345|sp|Q30WJ2|RIMP_DESDG RecName: Full=Ribosome maturation factor rimP
 gi|78220605|gb|ABB39954.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 173

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +  +I PVI         +  ++    +L+I+++  D  +T+  C  +S+ 
Sbjct: 3   MTVTTIHEQLLEIITPVIRSFDLELWGMDFIQGGKAVLRIYIDGPD-GVTIDQCATVSRH 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS---GDKQKLI 132
           I   L+VE+II G Y LEVSSPG++RP+   +    + GH     +         ++K  
Sbjct: 62  IGLALEVEDIIAGAYNLEVSSPGLERPLFSAAQLAAYKGHKAELVLRAPCAQFPGRKKFT 121

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
           G +       F L+ +     D  + +++  +D +  ARLI   +
Sbjct: 122 GVVGNVEGENFTLQIDPLKGGDNLQEELSAHWDDVKKARLIYDFD 166


>gi|295696155|ref|YP_003589393.1| protein of unknown function DUF150 [Bacillus tusciae DSM 2912]
 gi|295411757|gb|ADG06249.1| protein of unknown function DUF150 [Bacillus tusciae DSM 2912]
          Length = 154

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 9/160 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +A  +  + +P++E      V +  ++   N  L++FV+R +G + + DC  +S+
Sbjct: 1   MAKKRIAAVVEEIARPIVEGEGLELVDVEYVKEGANWFLRVFVDRPEGGVDIDDCSRVSE 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + I G Y LEVSSPGI+RP+     F R  G  V          ++   G 
Sbjct: 61  RLSDRLDEIDPIPGSYFLEVSSPGIERPLKNMPAFRRALGQTVVVTTYEPVQGRKSFQGL 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    + G  +           ++   I + ++ SAR + 
Sbjct: 121 LTEVDDEGIAVAD--------GDVVWTIPYRAVASARTVF 152


>gi|239997163|ref|ZP_04717687.1| hypothetical protein AmacA2_22177 [Alteromonas macleodii ATCC
           27126]
          Length = 152

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 82/159 (51%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +++P +E + F  V I  +   K+ +L++F++  +  +T+ DC ++S  +S 
Sbjct: 3   KLEEKLTEMLEPGVEALGFELVGIEFVRAGKHSILRVFIDH-ENGITVDDCADVSHQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILDVE+ I   Y LEVSSPG+DRP+ ++  ++   G VV   + +   D++   GK++  
Sbjct: 62  ILDVEDPISTEYNLEVSSPGMDRPLFKEKHYIESVGEVVQIRLSMPMDDRRNFKGKVLAC 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                 +E +          Q  ++  ++    ++ T +
Sbjct: 122 ENGIVSIEVDG--------QQFQLAVANIEKGNVVPTFD 152


>gi|228902320|ref|ZP_04066477.1| hypothetical protein bthur0014_34980 [Bacillus thuringiensis IBL
           4222]
 gi|228909641|ref|ZP_04073464.1| hypothetical protein bthur0013_37930 [Bacillus thuringiensis IBL
           200]
 gi|228940905|ref|ZP_04103464.1| hypothetical protein bthur0008_35450 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228966762|ref|ZP_04127806.1| hypothetical protein bthur0004_35680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228973834|ref|ZP_04134410.1| hypothetical protein bthur0003_35890 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980423|ref|ZP_04140733.1| hypothetical protein bthur0002_35910 [Bacillus thuringiensis Bt407]
 gi|229098286|ref|ZP_04229233.1| hypothetical protein bcere0020_35200 [Bacillus cereus Rock3-29]
 gi|229104379|ref|ZP_04235048.1| hypothetical protein bcere0019_35270 [Bacillus cereus Rock3-28]
 gi|229117303|ref|ZP_04246681.1| hypothetical protein bcere0017_35830 [Bacillus cereus Rock1-3]
 gi|229162753|ref|ZP_04290710.1| hypothetical protein bcere0009_35230 [Bacillus cereus R309803]
 gi|228620635|gb|EEK77504.1| hypothetical protein bcere0009_35230 [Bacillus cereus R309803]
 gi|228666203|gb|EEL21667.1| hypothetical protein bcere0017_35830 [Bacillus cereus Rock1-3]
 gi|228679077|gb|EEL33285.1| hypothetical protein bcere0019_35270 [Bacillus cereus Rock3-28]
 gi|228685184|gb|EEL39115.1| hypothetical protein bcere0020_35200 [Bacillus cereus Rock3-29]
 gi|228779243|gb|EEM27500.1| hypothetical protein bthur0002_35910 [Bacillus thuringiensis Bt407]
 gi|228785859|gb|EEM33862.1| hypothetical protein bthur0003_35890 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228792861|gb|EEM40419.1| hypothetical protein bthur0004_35680 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228818741|gb|EEM64807.1| hypothetical protein bthur0008_35450 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228849930|gb|EEM94761.1| hypothetical protein bthur0013_37930 [Bacillus thuringiensis IBL
           200]
 gi|228857289|gb|EEN01792.1| hypothetical protein bthur0014_34980 [Bacillus thuringiensis IBL
           4222]
          Length = 164

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 5   RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGA 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 64  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 124 EGKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|283836284|ref|ZP_06356025.1| hypothetical protein CIT292_10732 [Citrobacter youngae ATCC 29220]
 gi|291067647|gb|EFE05756.1| hypothetical protein CIT292_10732 [Citrobacter youngae ATCC 29220]
          Length = 140

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S ++DVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVMDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     ++R+ G  V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPLFTAEHYVRFLGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|94497166|ref|ZP_01303738.1| hypothetical protein SKA58_13228 [Sphingomonas sp. SKA58]
 gi|94423271|gb|EAT08300.1| hypothetical protein SKA58_13228 [Sphingomonas sp. SKA58]
          Length = 196

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 12/180 (6%)

Query: 9   SKYEPRIFGD---MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD-DGN 63
              E R+      M     ++++I+P ++ + F  V+I L    +   LQI  E      
Sbjct: 10  GDAEARMIVSGDCMADIAALTALIEPEVQALGFDLVRIKLFGSGDDYTLQIMAENPRTKQ 69

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + + DC  +S+ +S +LD  + IE  YRLEVSSPGIDRP+ R  DF  W GH        
Sbjct: 70  LVIEDCATISRRLSDVLDEADPIEEAYRLEVSSPGIDRPLTRLHDFQEWAGHEAKIGASE 129

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               ++   G + G           K G        + I F  +  A+L++TD L+ AS+
Sbjct: 130 IVSGRKSFRGVVNGVDGEEILFTDAKSG-------DVRIPFALVDEAKLLLTDALIAASM 182


>gi|229174483|ref|ZP_04302015.1| hypothetical protein bcere0006_35760 [Bacillus cereus MM3]
 gi|228609043|gb|EEK66333.1| hypothetical protein bcere0006_35760 [Bacillus cereus MM3]
          Length = 164

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 5   RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDS-EKGVDIEECGA 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 64  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 124 EGKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|104780026|ref|YP_606524.1| hypothetical protein PSEEN0793 [Pseudomonas entomophila L48]
 gi|259586182|sp|Q1IF45|RIMP_PSEE4 RecName: Full=Ribosome maturation factor rimP
 gi|95109013|emb|CAK13709.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 169

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 12/174 (6%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN 63
            +LHS +E            + +++ PV+E + ++   I  +   K+ +L+I++++ +G 
Sbjct: 7   FYLHSMHEG--VQVSSKLEQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDK-EGG 63

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + + DCE +S+  S ILDVE+ I   Y LEVSSPG+DRP+     F    G  V  ++  
Sbjct: 64  ILVDDCEAVSRQASAILDVEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKLRT 123

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
               ++   G + G         +E+     ++  +  +  DS+  A +I + +
Sbjct: 124 PFEGRRNFQGLLRG--------VEEQDVVVQVDNHEFLLPIDSIDKANIIPSFD 169


>gi|120556257|ref|YP_960608.1| hypothetical protein Maqu_3350 [Marinobacter aquaeolei VT8]
 gi|166990772|sp|A1U602|RIMP_MARAV RecName: Full=Ribosome maturation factor rimP
 gi|120326106|gb|ABM20421.1| protein of unknown function DUF150 [Marinobacter aquaeolei VT8]
          Length = 153

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 81/156 (51%), Gaps = 9/156 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++PV+E + +    I       +  L++F++  +  + + DCE++S+ +S ++D
Sbjct: 6   KQLEDILRPVVEGLGYEFWGIEFRSHGHHSKLRVFIDDAENGIAIDDCEKVSRQVSGVMD 65

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I+  Y LEVSSPG+DRP+ R   +  + GH V  ++ ++   ++K +G I G    
Sbjct: 66  VEDPIQTEYTLEVSSPGMDRPLFRLEQYEAFIGHKVQIKLRMAFEGRRKFLGLIKGVEG- 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                        +++ +  + FDS+  A ++   E
Sbjct: 125 -------DDVVVVVDDHEYLLPFDSIEKANIVPVFE 153


>gi|157085946|gb|ABV15624.1| hypothetical protein CKO_04571 [Citrobacter koseri ATCC BAA-895]
          Length = 140

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  V   + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYARFLGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|197364150|ref|YP_002143787.1| hypothetical protein SSPA2946 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|207858538|ref|YP_002245189.1| hypothetical protein SEN3123 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224585086|ref|YP_002638885.1| hypothetical protein SPC_3359 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238910083|ref|ZP_04653920.1| hypothetical protein SentesTe_02955 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825803|ref|ZP_06544971.1| hypothetical protein Salmonellentericaenterica_10351 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25302491|pir||AB0902 conserved hypothetical protein STY3469 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421847|gb|AAL22160.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16504356|emb|CAD07808.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139176|gb|AAO70744.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129477|gb|AAV78983.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|160867493|gb|ABX24116.1| hypothetical protein SARI_04336 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161365658|gb|ABX69426.1| hypothetical protein SPAB_04100 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197095627|emb|CAR61195.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|206710341|emb|CAR34699.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224469614|gb|ACN47444.1| hypothetical protein SPC_3359 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261248454|emb|CBG26291.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|301159838|emb|CBW19357.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914314|dbj|BAJ38288.1| hypothetical protein STMDT12_C33450 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321225972|gb|EFX51026.1| clustered with transcription termination protein NusA [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|332990146|gb|AEF09129.1| hypothetical protein STMUK_3272 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 140

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|170719905|ref|YP_001747593.1| hypothetical protein PputW619_0719 [Pseudomonas putida W619]
 gi|259586190|sp|B1J268|RIMP_PSEPW RecName: Full=Ribosome maturation factor rimP
 gi|169757908|gb|ACA71224.1| protein of unknown function DUF150 [Pseudomonas putida W619]
          Length = 169

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 12/174 (6%)

Query: 5   HFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN 63
            +LHS +E            + +++ PV+E + ++   I  +   K+ +L+I++++ +G 
Sbjct: 7   FYLHSMHEG--VQVSSKLEQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDK-EGG 63

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + + DCE +S+  S ILDVE+ I   Y LEVSSPG+DRP+     F    G  V  ++  
Sbjct: 64  ILVEDCEAVSRQASAILDVEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKLRT 123

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
               ++   G + G         +E+     ++  +  +  DS+  A +I + +
Sbjct: 124 PFEGRRNFQGLLRG--------VEEQDVVVQVDSHEFLLPIDSIDKANIIPSFD 169


>gi|83644099|ref|YP_432534.1| hypothetical protein HCH_01237 [Hahella chejuensis KCTC 2396]
 gi|83632142|gb|ABC28109.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 173

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
             D+  +++PV+E M      +  +   K  LL+I++++ +  + + DCE++S+ IS IL
Sbjct: 27  KDDLYQLLKPVVEGMGCDFWGMDYIAQGKRSLLRIYIDK-ESGVLVDDCEKVSRQISAIL 85

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I+G Y LEVSSPG DRP+     +  + G ++   +      ++K  G +     
Sbjct: 86  DVEDPIKGEYTLEVSSPGWDRPLFNVEQYKAYIGSIIEVRLQAPFNGRRKFKGLLAAVEN 145

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               L+ +          +     +++  A ++ 
Sbjct: 146 DEIVLQVDAE--------EFIFPVETIDKANVVP 171


>gi|223042073|ref|ZP_03612249.1| hypothetical protein AM202_0665 [Actinobacillus minor 202]
 gi|240949225|ref|ZP_04753569.1| hypothetical protein AM305_09786 [Actinobacillus minor NM305]
 gi|223017148|gb|EEF15584.1| hypothetical protein AM202_0665 [Actinobacillus minor 202]
 gi|240296341|gb|EER46985.1| hypothetical protein AM305_09786 [Actinobacillus minor NM305]
          Length = 153

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ + Q  IE M    V I        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLTELTQDTIEAMGCELVGIECQRAGRFLTVRLYIDK-EGGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAHYERFVGREITIHLRIPMFDRRKWQGKLEKVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  +          +   +F ++  A L+ 
Sbjct: 123 GDLITLIVDNE--------ERQFAFGNIQKANLVP 149


>gi|242240751|ref|YP_002988932.1| hypothetical protein Dd703_3348 [Dickeya dadantii Ech703]
 gi|242132808|gb|ACS87110.1| protein of unknown function DUF150 [Dickeya dadantii Ech703]
          Length = 140

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S ++DVE+ I 
Sbjct: 1   MISAPVEALGYELVGIEFIRGRQSTLRIYIDSED-GITVDDCADVSHQVSAVMDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     + R+ G  V+  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGVDRPLFTAEHYERFTGEEVSLVLRMAVQNRRKWQGIIKSVEGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|229061420|ref|ZP_04198765.1| hypothetical protein bcere0026_35060 [Bacillus cereus AH603]
 gi|229134624|ref|ZP_04263434.1| hypothetical protein bcere0014_35330 [Bacillus cereus BDRD-ST196]
 gi|228648885|gb|EEL04910.1| hypothetical protein bcere0014_35330 [Bacillus cereus BDRD-ST196]
 gi|228717843|gb|EEL69491.1| hypothetical protein bcere0026_35060 [Bacillus cereus AH603]
          Length = 164

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 5   RRLFMDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDS-EKGVEIEECGA 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 64  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMF 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++        L    +  K     +I I  D + +ARL VT
Sbjct: 124 EGKLLSYDGNTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|261342616|ref|ZP_05970474.1| hypothetical protein ENTCAN_09187 [Enterobacter cancerogenus ATCC
           35316]
 gi|296104884|ref|YP_003615030.1| YhbC-like protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|288315264|gb|EFC54202.1| hypothetical protein ENTCAN_09187 [Enterobacter cancerogenus ATCC
           35316]
 gi|295059343|gb|ADF64081.1| YhbC-like protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 140

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFVRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     ++R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYVRFTGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|119774096|ref|YP_926836.1| hypothetical protein Sama_0959 [Shewanella amazonensis SB2B]
 gi|166919003|sp|A1S460|RIMP_SHEAM RecName: Full=Ribosome maturation factor rimP
 gi|119766596|gb|ABL99166.1| protein of unknown function DUF150 [Shewanella amazonensis SB2B]
          Length = 151

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ ++ P +E   +    I  +   K+ +L+++++  +  +++ DC + S+ IS I
Sbjct: 4   LETRLAEMLTPAVEAAGYVVWGIEYVQAGKHSILRVYIDS-EQGISVDDCADASRQISAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISNEYTLEVSSPGLDRPLFNAAQYARYVGEDVKVQLTMPVEGSRNLKGVIDKVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                ++ + +         + ++ D++    +I
Sbjct: 123 GQMLTIKVDGK--------TLVVALDNIRKGNII 148


>gi|319790653|ref|YP_004152286.1| protein of unknown function DUF150 [Thermovibrio ammonificans HB-1]
 gi|317115155|gb|ADU97645.1| protein of unknown function DUF150 [Thermovibrio ammonificans HB-1]
          Length = 162

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 7/153 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++ P++EE  F  V +   +E    +L+I+ +R  G +T+ DC+ +S+ I  +
Sbjct: 8   VIDKVKELLAPILEEGGFELVDVEFQKEPVGWVLRIYADRPQGGITISDCQWISERIGTL 67

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++I   Y LEVSSPG+DRP+  + DF R  G VV  +      +++   G ++ TS
Sbjct: 68  LDVEDVIPHAYHLEVSSPGLDRPLKTQRDFERHRGVVVKIKTHEPMDNQRNFKGAVVSTS 127

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E G  +              + I +D++ SAR+
Sbjct: 128 ERGVTV------HDVSRNADVEIPYDNIKSARV 154


>gi|115372720|ref|ZP_01460026.1| YlxS [Stigmatella aurantiaca DW4/3-1]
 gi|115370201|gb|EAU69130.1| YlxS [Stigmatella aurantiaca DW4/3-1]
          Length = 249

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 10/160 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
              +     ++++P++       + +  + E+   +L++F+++  G + L +C ++S+A+
Sbjct: 95  KQTVEERAMTLLEPIVAGEGLELIDLEFVREREGWVLRLFIDKPGGRVGLDECSQVSRAV 154

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGK 134
            P LDVE+++   Y LEVSSPG++RP+ + S + R  G  V  +     GD  ++   G 
Sbjct: 155 DPALDVEDLVPNEYNLEVSSPGVNRPLKKLSHYERVKGQKVKVKTFGPIGDPPRKNFSGT 214

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   +  G  +E E  G          I    +  A L  
Sbjct: 215 LTEVTAEGIAVEVEGAGA-------FRIPLKDIAKANLEF 247


>gi|90022355|ref|YP_528182.1| hypothetical protein Sde_2710 [Saccharophagus degradans 2-40]
 gi|123395825|sp|Q21H59|RIMP_SACD2 RecName: Full=Ribosome maturation factor rimP
 gi|89951955|gb|ABD81970.1| protein of unknown function DUF150 [Saccharophagus degradans 2-40]
          Length = 151

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +  ++ PV+E +      + L ++ K  LL+IF+E+ +  + + DCE +S+ +S 
Sbjct: 3   GKETRLEKMLAPVVESLGCEFWGLELRMQGKQSLLRIFIEK-EAGVGVEDCENVSRQVSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y LEVSSPG+DRP+     F R+ G  V+  +  +   ++   GK+   
Sbjct: 62  VLDVEDPISGEYTLEVSSPGMDRPLFTLDHFTRFVGEHVSLRLRTAFDGRRNFSGKLTAV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    L  +          +  + F+ +  A+++ 
Sbjct: 122 EDDEVILLIDAE--------EYILPFELIDKAQVVP 149


>gi|322615293|gb|EFY12214.1| hypothetical protein SEEM315_15045 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618348|gb|EFY15239.1| hypothetical protein SEEM971_03440 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622847|gb|EFY19691.1| hypothetical protein SEEM973_09985 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626831|gb|EFY23628.1| hypothetical protein SEEM974_17064 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631400|gb|EFY28160.1| hypothetical protein SEEM201_11154 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635333|gb|EFY32047.1| hypothetical protein SEEM202_21223 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643468|gb|EFY40031.1| hypothetical protein SEEM954_03710 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647096|gb|EFY43597.1| hypothetical protein SEEM054_06288 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648899|gb|EFY45344.1| hypothetical protein SEEM675_09177 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655091|gb|EFY51402.1| hypothetical protein SEEM965_16526 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657694|gb|EFY53962.1| hypothetical protein SEEM19N_17226 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664190|gb|EFY60388.1| hypothetical protein SEEM801_14392 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667473|gb|EFY63635.1| hypothetical protein SEEM507_15450 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674721|gb|EFY70813.1| hypothetical protein SEEM877_12264 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675646|gb|EFY71719.1| hypothetical protein SEEM867_11084 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682282|gb|EFY78305.1| hypothetical protein SEEM180_00717 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684885|gb|EFY80883.1| hypothetical protein SEEM600_02779 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323191868|gb|EFZ77116.1| hypothetical protein SEEM581_13996 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199027|gb|EFZ84124.1| hypothetical protein SEEM501_06456 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204273|gb|EFZ89282.1| hypothetical protein SEEM460_13042 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207620|gb|EFZ92567.1| hypothetical protein SEEM020_13687 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211327|gb|EFZ96171.1| hypothetical protein SEEM6152_16965 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323214731|gb|EFZ99480.1| hypothetical protein SEEM0077_18874 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221211|gb|EGA05637.1| hypothetical protein SEEM0047_04951 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224048|gb|EGA08341.1| hypothetical protein SEEM0055_21925 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230303|gb|EGA14422.1| hypothetical protein SEEM0052_18579 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233279|gb|EGA17373.1| hypothetical protein SEEM3312_09406 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239316|gb|EGA23366.1| hypothetical protein SEEM5258_06940 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242433|gb|EGA26459.1| hypothetical protein SEEM1156_15792 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246943|gb|EGA30909.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254124|gb|EGA37944.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255241|gb|EGA39018.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262704|gb|EGA46260.1| hypothetical protein SEEM8284_03071 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264014|gb|EGA47522.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269400|gb|EGA52855.1| ribosome maturation protein RimP [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 140

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGKMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|269137761|ref|YP_003294461.1| hypothetical protein ETAE_0403 [Edwardsiella tarda EIB202]
 gi|267983421|gb|ACY83250.1| conserved hypothetical protein [Edwardsiella tarda EIB202]
 gi|304557818|gb|ADM40482.1| hypothetical protein ETAF_0358 [Edwardsiella tarda FL6-60]
          Length = 140

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  ++  L+I+++ ++  +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRHSTLRIYIDSEE-GITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+     +  +    V   + ++  +++K  G I         +  
Sbjct: 60  VAYYLEVSSPGMDRPLFTAEHYTHFLNEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           + + E          +  ++  A L+ 
Sbjct: 120 DGKDEV--------FALSNVQKANLVP 138


>gi|332976857|gb|EGK13682.1| protein of hypothetical function DUF150 [Desmospora sp. 8437]
          Length = 170

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 9/172 (5%)

Query: 4   THFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG 62
           T       E        +   +  ++QP++ E           +  KN +L+++++R DG
Sbjct: 5   TGRRTELKEGEDQMSRKVTEAVEEMVQPILAEEGLELYDTEYTKEGKNWILRVYIDRPDG 64

Query: 63  NMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
            + L DC  +S+ +  +LD E+ + G Y LEVSSPG +RP+ + + F    G  +     
Sbjct: 65  KVDLDDCGRVSERLGEVLDREDPLTGQYFLEVSSPGAERPLKKPAHFEAAVGKRIFLNTF 124

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                ++K  G +   S     +E +        E  + I  + +  ARL++
Sbjct: 125 EPVDGRKKFEGVLTRYSPESLTVETD--------EGAVEIPTEKVAKARLVL 168


>gi|289207908|ref|YP_003459974.1| hypothetical protein TK90_0723 [Thioalkalivibrio sp. K90mix]
 gi|288943539|gb|ADC71238.1| protein of unknown function DUF150 [Thioalkalivibrio sp. K90mix]
          Length = 151

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E   F    +        + L+I+++  +  +T+ DC  +S+    +L+
Sbjct: 6   EQLKTLLAPVVEGQGFVFWGLEYHPGSKPVMLRIYIDSPE-GVTVDDCALVSEQAGAVLE 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE  + G+Y LEVSSPGI+RP+     +  + GH V   +      ++   G ++G  E 
Sbjct: 65  VEQALRGNYTLEVSSPGIERPLFTPDQYRGYIGHPVKVRLSWPEHGRRNYRGTLIGVDEE 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +E +  G          +  +++ +AR+
Sbjct: 125 MIEVEVDGTG--------YELPLNAIHNARV 147


>gi|88797621|ref|ZP_01113210.1| hypothetical protein MED297_10726 [Reinekea sp. MED297]
 gi|88779793|gb|EAR10979.1| hypothetical protein MED297_10726 [Reinekea sp. MED297]
          Length = 155

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +++ +I+PV+  M F    +  +       L+I+++ +D  + +  C ++S+ +S +LD
Sbjct: 9   DELTDLIEPVVIGMGFLLWGVEYIPSGNYSTLRIYIDHED-GIQVDQCADVSRQVSAVLD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I  +Y LEVSSPG+DRP+     +  + G  V  ++  +   ++K  G ++G  + 
Sbjct: 68  VEDPISSNYTLEVSSPGMDRPLFTLEQYAAYIGEWVDIKLRYAFEGRRKFKGVLVGIEDG 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
              ++ +K         +  +  +S+   R+I  
Sbjct: 128 DVIVQVDKE--------EFLLPIESIDRGRIIPN 153


>gi|295097659|emb|CBK86749.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 140

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFVRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     ++R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTDEHYVRFTGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|294011602|ref|YP_003545062.1| hypothetical protein SJA_C1-16160 [Sphingobium japonicum UT26S]
 gi|292674932|dbj|BAI96450.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 196

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 9/167 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAI 76
           M    +++++I+P ++ + F  V+I L    +   LQI  ER +   + + DC  +S+ +
Sbjct: 23  MADIAELTALIEPEVKALGFDLVRIKLFGSGDEYTLQIMAERPETKQLVIEDCAAISRRL 82

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +LD  + IE  YRLEVSSPGIDRP+ R +DFL W GH        +   ++   G + 
Sbjct: 83  SDVLDEADPIEEAYRLEVSSPGIDRPLTRLTDFLEWAGHEAKIAATETVSGRKSFRGVLK 142

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           G           K G        +AI F  +  A+LI+TD L+ AS+
Sbjct: 143 GVEGEDILFADAKAG-------DVAIPFALVGDAKLILTDALIAASM 182


>gi|119504357|ref|ZP_01626437.1| hypothetical protein MGP2080_00755 [marine gamma proteobacterium
           HTCC2080]
 gi|119459865|gb|EAW40960.1| hypothetical protein MGP2080_00755 [marine gamma proteobacterium
           HTCC2080]
          Length = 166

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 10/154 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +S ++ P +E + F    +  L   +   L++F+E  D  +++ DC ++S+ +  
Sbjct: 3   GKESRLSELLTPTVESLGFELWGLELLSPNRRPTLRLFIEG-DTGVSVDDCAKVSRHVGG 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y LEVSSPGIDR + +   +  + G  +  ++      +++  G +MG 
Sbjct: 62  VLDVEDPISGDYTLEVSSPGIDRLLFKVDQYGLYIGEPIEVKLRFPFEGRRRFRGWLMGI 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 +  E             +    +  AR+
Sbjct: 122 EGEDVVVRVED--------HDYLLPLKQIDRARV 147


>gi|229168556|ref|ZP_04296279.1| hypothetical protein bcere0007_35130 [Bacillus cereus AH621]
 gi|228614962|gb|EEK72064.1| hypothetical protein bcere0007_35130 [Bacillus cereus AH621]
          Length = 164

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 5   RRLFMDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDS-EKGVEIEECGA 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 64  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMF 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I I  D + +ARL VT
Sbjct: 124 EGKLLSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 163


>gi|329997773|ref|ZP_08302912.1| hypothetical protein HMPREF9538_00552 [Klebsiella sp. MS 92-3]
 gi|150956943|gb|ABR78973.1| hypothetical protein KPN_03578 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|328538907|gb|EGF64968.1| hypothetical protein HMPREF9538_00552 [Klebsiella sp. MS 92-3]
          Length = 140

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S ++DVE+ I 
Sbjct: 1   MLTAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVMDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|126253833|sp|Q1RIX2|RIMP_RICBR RecName: Full=Ribosome maturation factor rimP
 gi|259586219|sp|A8GW29|RIMP_RICB8 RecName: Full=Ribosome maturation factor rimP
          Length = 168

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 91/164 (55%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           +   I+ +IQ  + +M F  V + +    + +++I ++R DD  +T+ DC + S  IS I
Sbjct: 4   IEQQITDLIQETLSDMGFELVLVRVKGLSSKVVEILIDRLDDQKVTIEDCTKASNTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS G++RP+V+  ++ R+ G  V  ++      + +  G I+   
Sbjct: 64  LDVEDLIEEAYYLEVSSSGVERPLVKFENYKRFIGREVKIKLKELLNGRSRYQGTIIEAK 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           +   +L+ E          ++ I++D + SA L++T+E+ +  L
Sbjct: 124 DDKVYLKWED--------QEVIINYDLIKSANLVLTEEMFKKLL 159


>gi|77457004|ref|YP_346509.1| hypothetical protein Pfl01_0777 [Pseudomonas fluorescens Pf0-1]
 gi|77381007|gb|ABA72520.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 173

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I      ++ +L++++++ +G + + DC  +S+ IS +LD
Sbjct: 27  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDK-EGGVLVDDCAIVSRQISGVLD 85

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 86  VEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKLRSPFEGRRNFQGLLRGV--- 142

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     +   +  +  D +  A +I + +
Sbjct: 143 -----EEQDVVVQVENHEFLLPIDMIDKANIIPSFD 173


>gi|261492532|ref|ZP_05989085.1| hypothetical protein COK_0954 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261496807|ref|ZP_05993181.1| hypothetical protein COI_2524 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261307554|gb|EEY08883.1| hypothetical protein COI_2524 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311691|gb|EEY12841.1| hypothetical protein COK_0954 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 153

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE + F  V I        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEDLVLDSIEALGFELVGIECQRAGRFLTVRLYIDK-EGGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE+ I   Y LEVSSPG+DRP+   + + R+ G  V   + +   D++K  GKI    
Sbjct: 63  FDVEDPIADKYNLEVSSPGLDRPLFTVAHYERFIGQDVVIHLRIPMFDRRKWQGKIKQVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  E              +F ++  A L+ 
Sbjct: 123 GDFITLTVENEDC--------QFAFGNIQKANLVP 149


>gi|194099045|ref|YP_002002126.1| hypothetical protein NGK_1501 [Neisseria gonorrhoeae NCCP11945]
 gi|193934335|gb|ACF30159.1| UPF0090 protein [Neisseria gonorrhoeae NCCP11945]
          Length = 205

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 16/168 (9%)

Query: 8   HSKYEPR---IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNM 64
             +  PR       +G + DI ++++  +  + +  V   L  +    L++F+++ +G +
Sbjct: 45  FDEKWPRGHFFIMYIGSSMDIQTILEKTLPGLGYELVDFELAAQG--TLRVFIDK-EGGI 101

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           T+ DC  +S  +S +  VE+I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L 
Sbjct: 102 TVEDCATVSNHLSRVFMVEDI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLP 159

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G ++  IGKI G       +  + +         + I   ++  ARL
Sbjct: 160 IGGQKNFIGKIEGCENDTVTVSFDGK--------TVQIELGNIDKARL 199


>gi|307825108|ref|ZP_07655329.1| protein of unknown function DUF150 [Methylobacter tundripaludum
           SV96]
 gi|307733856|gb|EFO04712.1| protein of unknown function DUF150 [Methylobacter tundripaludum
           SV96]
          Length = 161

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + ++I+P++E + +  V I      K+ LL+I+++  D  + + DC ++S  IS ++D
Sbjct: 6   EHLVNLIEPIVEGLGYECVGIEYNPHPKHGLLRIYIDS-DNGILVEDCTKVSHQISGVMD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I G+Y LE+SSPG DRP  + S F R+ G  V   +  +   ++K+ G I    + 
Sbjct: 65  VEDPILGNYHLEISSPGEDRPFFKVSQFERYIGSTVLVHLFKAIDGRRKITGLIEKVEDD 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
              L+          E    + F ++  ARL+  + L+     +  
Sbjct: 125 IITLKD--------GEQVFEVPFIAMSKARLVP-EYLIEKGGRSGK 161


>gi|34222833|sp|Q88DV5|RIMP_PSEPK RecName: Full=Ribosome maturation factor rimP
          Length = 158

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + ++   I  +   K+ +L+I++++ +G + + DCE +S+  S ILD
Sbjct: 12  EQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDK-EGGILVDDCEAVSRQASAILD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 71  VEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKLRSPFEGRRNFQGLLRG---- 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     ++  +  +  DS+  A +I + +
Sbjct: 127 ----VEEQDVVVQVDNQEFLLPIDSIDKANIIPSFD 158


>gi|259585813|sp|Q2SML5|RIMP_HAHCH RecName: Full=Ribosome maturation factor rimP
          Length = 150

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M    D+  +++PV+E M      +  +   K  LL+I++++ +  + + DCE++S+ IS
Sbjct: 1   MARKDDLYQLLKPVVEGMGCDFWGMDYIAQGKRSLLRIYIDK-ESGVLVDDCEKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I+G Y LEVSSPG DRP+     +  + G ++   +      ++K  G +  
Sbjct: 60  AILDVEDPIKGEYTLEVSSPGWDRPLFNVEQYKAYIGSIIEVRLQAPFNGRRKFKGLLAA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  L+ +          +     +++  A ++ 
Sbjct: 120 VENDEIVLQVDAE--------EFIFPVETIDKANVVP 148


>gi|312796185|ref|YP_004029107.1| hypothetical protein RBRH_03643 [Burkholderia rhizoxinica HKI 454]
 gi|312167960|emb|CBW74963.1| Hypothetical cytosolic protein [Burkholderia rhizoxinica HKI 454]
          Length = 216

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 9/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +S +I+  +  + +  V +        +L++F+++    + + DCE++++ +  +L VE
Sbjct: 66  QLSELIENTVTGLGYELVDLERSGRG--MLRVFIDQP-AGIAIDDCEKVTRQLQHVLTVE 122

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ +++DF R+ G  V   +    G ++   G +   +    
Sbjct: 123 NI--DYERLEVSSPGLDRPLKKRADFERFAGSEVMVTLKQPLGGRKSFRGILHAPNGDTI 180

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E +        ++  +   +  ARL+   +
Sbjct: 181 GLEFEGKD----GPARLDFTLADMDRARLVPQVD 210


>gi|167035705|ref|YP_001670936.1| hypothetical protein PputGB1_4714 [Pseudomonas putida GB-1]
 gi|189040210|sp|B0KHY0|RIMP_PSEPG RecName: Full=Ribosome maturation factor rimP
 gi|166862193|gb|ABZ00601.1| protein of unknown function DUF150 [Pseudomonas putida GB-1]
          Length = 152

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + ++   I  +   K+ +L+I++++ +G + + DCE +S+  S ILD
Sbjct: 6   EQLQALLAPVVEGLGYQCWGIEYVSQGKHSVLRIYIDK-EGGILVEDCEAVSRQASAILD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 65  VEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKLRSPFEGRRNFQGLLRG---- 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     ++  +  +  DS+  A +I + +
Sbjct: 121 ----VEEQDVVVQVDNQEFLLPIDSIDKANIIPSFD 152


>gi|239826653|ref|YP_002949277.1| hypothetical protein GWCH70_1151 [Geobacillus sp. WCH70]
 gi|259585779|sp|C5D9C5|RIMP_GEOSW RecName: Full=Ribosome maturation factor rimP
 gi|239806946|gb|ACS24011.1| protein of unknown function DUF150 [Geobacillus sp. WCH70]
          Length = 157

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ P++ +M    V I  ++  KN  L++F++  D  + +  C  +S+ 
Sbjct: 1   MSKKVTNIVEELVTPILADMDLELVDIEYVKEGKNWFLRVFIDS-DNGVDIEQCGMVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +  DF +  G  V  +       +++  G++
Sbjct: 60  LSEKLDEVDPIPHNYFLEVSSPGAERPLKKPKDFTKAIGKNVYIKTYEPIEGEKEFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +G   T   +  + +  K      I I ++ + SARL V
Sbjct: 120 IGFDGTTVSVTVKDKTRKK----TIDIPYEKVASARLAV 154


>gi|84778873|dbj|BAE73650.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 140

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  +   L+I++   D  +T+ DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRQSTLRIYI-NSDEGITVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRP+   + + ++ G  V+  + ++  +++K  G I         +  
Sbjct: 60  VAYSLEVSSPGLDRPLFTAAHYRQFIGSDVSVVLRIAVQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           + + E          +  ++  A L+ 
Sbjct: 120 DGKDEV--------FALQNIQKANLVP 138


>gi|90416133|ref|ZP_01224065.1| hypothetical protein GB2207_10663 [marine gamma proteobacterium
           HTCC2207]
 gi|90331858|gb|EAS47072.1| hypothetical protein GB2207_10663 [marine gamma proteobacterium
           HTCC2207]
          Length = 151

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + +++QPV+E +      + L    K  LL+I+++R+D  + + DCE +S+    
Sbjct: 3   AVDSTLKALLQPVVEALDCELWGLELQSGGKRKLLRIYIDRED-GIGVEDCERVSRQSGS 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE++I G Y LEVSSPG+DRP+   + + R+ G  V+  +  +   ++   G+++G 
Sbjct: 62  VLDVEDVISGEYILEVSSPGMDRPLYELAQYERYIGEDVSLRLRFAYDGRRNFKGRLVGV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 L           + +     + +  A ++ 
Sbjct: 122 DGDEIVLVV--------ADTEYLFPVEGIDKANVVP 149


>gi|148976709|ref|ZP_01813396.1| hypothetical protein VSWAT3_19956 [Vibrionales bacterium SWAT-3]
 gi|145964060|gb|EDK29318.1| hypothetical protein VSWAT3_19956 [Vibrionales bacterium SWAT-3]
          Length = 151

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ ++   +    +  V +  +    +  L+I+++  +  + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLDAPVAASGYELVGLEFIRAGEHSTLRIYIDSPN-GINVDDCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ +   + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPISVAYNLEVSSPGLERPLFKAEHYQQFIGHEVSIVLKMAVGNRRKWKGDIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  E + E             ++  A LI 
Sbjct: 121 IEGETVKVLVEGQEE--------EFVLSNIAKANLIP 149


>gi|254361244|ref|ZP_04977387.1| hypothetical protein MHA_0829 [Mannheimia haemolytica PHL213]
 gi|153092740|gb|EDN73783.1| hypothetical protein MHA_0829 [Mannheimia haemolytica PHL213]
          Length = 153

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   IE + F  V I        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLEDLVLDSIEALGFELVGIECQRAGRFLTVRLYIDK-EGGVTIDDCSDVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE+ I   Y LEVSSPG+DRP+   + + R+ G  V   + +   D++K  GKI    
Sbjct: 63  FDVEDPIADKYNLEVSSPGLDRPLFTVAHYERFIGQDVVIHLRIPMFDRRKWQGKIKQVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  E              +F ++  A L+ 
Sbjct: 123 GDFITLTVENEDR--------QFAFGNIQKANLVP 149


>gi|325276163|ref|ZP_08141968.1| ribosome maturation protein RimP [Pseudomonas sp. TJI-51]
 gi|324098700|gb|EGB96741.1| ribosome maturation protein RimP [Pseudomonas sp. TJI-51]
          Length = 152

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+E + ++   I  +   K+ +L+I++++ +G + + DCE +S+  S ILD
Sbjct: 6   EQLQALLAPVVEGLGYQCWGIEFVSQGKHSVLRIYIDK-EGGILVDDCEAVSRQASAILD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 65  VEDPISSEYTLEVSSPGMDRPLFTLEQFASHAGEQVKIKLRSPFEGRRNFQGLLRG---- 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     ++  +  +  DS+  A +I + +
Sbjct: 121 ----VEEQDVVVQVDNQEFLLPIDSIDKANIIPSFD 152


>gi|121998530|ref|YP_001003317.1| hypothetical protein Hhal_1751 [Halorhodospira halophila SL1]
 gi|166980218|sp|A1WXV3|RIMP_HALHL RecName: Full=Ribosome maturation factor rimP
 gi|121589935|gb|ABM62515.1| protein of unknown function DUF150 [Halorhodospira halophila SL1]
          Length = 151

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 83/157 (52%), Gaps = 9/157 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     + S+++P +  + +  V + L   K    L+++++     + L DCE +S  +S
Sbjct: 1   MSQIQTLHSLLEPTVTGLGYELVGVELTGAKGNRTLRVYIDTP-AGIRLEDCEAVSHQVS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ IEG Y LEVSSPG+DRP+ + +D+ R++G  +   ++     ++++ G ++G
Sbjct: 60  GLLDVEDPIEGAYNLEVSSPGLDRPIFKSADYDRFSGERIKLRLLELYEGRRRVKGVLLG 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +         ++ +++ I  + +  ARL +
Sbjct: 120 LDGEFVRVRD-------VDGVELRIPLELIDRARLDL 149


>gi|238897564|ref|YP_002923243.1| hypothetical protein HDEF_0333 [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259585781|sp|C4K3F2|RIMP_HAMD5 RecName: Full=Ribosome maturation factor rimP
 gi|229465321|gb|ACQ67095.1| conserved hypothetical protein [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 155

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 78/161 (48%), Gaps = 9/161 (5%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           R  G   L   +  +I   +E + +  V I  ++ +  +L+I+++ ++  +T+  C ++S
Sbjct: 2   RSVGLSILVKKLKKIITAPVEGLGYELVGIEFIQSRQSVLRIYIDHEE-GVTVDSCADVS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +S +LDVE+ I   Y LE+SSPG+DRP+     + ++ G  V   + ++  +++K  G
Sbjct: 61  KEVSLVLDVEDPITVPYNLEISSPGLDRPLFTARHYAQFIGEKVNLMLRMAIQNQRKWQG 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            I         +   ++ E          +  ++  A L+ 
Sbjct: 121 IIKSVDGESIIVAVNQKDEV--------FALSNIQKANLVP 153


>gi|228922571|ref|ZP_04085871.1| hypothetical protein bthur0011_35560 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228960033|ref|ZP_04121697.1| hypothetical protein bthur0005_35040 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229047503|ref|ZP_04193093.1| hypothetical protein bcere0027_34860 [Bacillus cereus AH676]
 gi|229071315|ref|ZP_04204538.1| hypothetical protein bcere0025_34880 [Bacillus cereus F65185]
 gi|229081072|ref|ZP_04213582.1| hypothetical protein bcere0023_37110 [Bacillus cereus Rock4-2]
 gi|229111288|ref|ZP_04240841.1| hypothetical protein bcere0018_35340 [Bacillus cereus Rock1-15]
 gi|229129093|ref|ZP_04258066.1| hypothetical protein bcere0015_35380 [Bacillus cereus BDRD-Cer4]
 gi|229146388|ref|ZP_04274759.1| hypothetical protein bcere0012_35310 [Bacillus cereus BDRD-ST24]
 gi|229152016|ref|ZP_04280211.1| hypothetical protein bcere0011_35560 [Bacillus cereus m1550]
 gi|229180093|ref|ZP_04307437.1| hypothetical protein bcere0005_34390 [Bacillus cereus 172560W]
 gi|228603302|gb|EEK60779.1| hypothetical protein bcere0005_34390 [Bacillus cereus 172560W]
 gi|228631365|gb|EEK87999.1| hypothetical protein bcere0011_35560 [Bacillus cereus m1550]
 gi|228637021|gb|EEK93480.1| hypothetical protein bcere0012_35310 [Bacillus cereus BDRD-ST24]
 gi|228654330|gb|EEL10195.1| hypothetical protein bcere0015_35380 [Bacillus cereus BDRD-Cer4]
 gi|228672064|gb|EEL27355.1| hypothetical protein bcere0018_35340 [Bacillus cereus Rock1-15]
 gi|228702116|gb|EEL54592.1| hypothetical protein bcere0023_37110 [Bacillus cereus Rock4-2]
 gi|228711769|gb|EEL63721.1| hypothetical protein bcere0025_34880 [Bacillus cereus F65185]
 gi|228723750|gb|EEL75105.1| hypothetical protein bcere0027_34860 [Bacillus cereus AH676]
 gi|228799549|gb|EEM46502.1| hypothetical protein bthur0005_35040 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228837000|gb|EEM82341.1| hypothetical protein bthur0011_35560 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 164

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 5   RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGA 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 64  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I IS D + +ARL VT
Sbjct: 124 EGKLLSYDGTTITLLLTIKTRKK----EIQISMDKVANARLAVT 163


>gi|220931625|ref|YP_002508533.1| hypothetical protein Hore_07810 [Halothermothrix orenii H 168]
 gi|259585780|sp|B8CW69|RIMP_HALOH RecName: Full=Ribosome maturation factor rimP
 gi|219992935|gb|ACL69538.1| uncharacterized protein conserved in bacteria [Halothermothrix
           orenii H 168]
          Length = 159

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 7/161 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  + QP++E      V +  ++E  N +L++F+E  +G +TL  CE +S+ +  
Sbjct: 3   KITDRVEDLAQPIVESQGLELVDVEYVKEGENRVLRVFIENPEGEVTLDHCENVSKNLDE 62

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + I+  Y LEVSSPGI+RP+ +K DF R++G +   +        +++ G I G 
Sbjct: 63  KLDEVDPIQESYILEVSSPGIERPLKKKEDFDRFSGKLAYIKTFAPVSGNKEITGIIKGR 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
                      +  K  ++ ++ I F  +  A L+V  + +
Sbjct: 123 DGDNI------KVLKKDDDKELEIPFSQIAKAHLMVDFDNI 157


>gi|329891252|ref|ZP_08269595.1| hypothetical protein BDIM_29650 [Brevundimonas diminuta ATCC 11568]
 gi|328846553|gb|EGF96117.1| hypothetical protein BDIM_29650 [Brevundimonas diminuta ATCC 11568]
          Length = 198

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERD-DGNMTLRDCEEL 72
           +         +  +I PV E +    V++ L+       LQI  ER  D ++++ +C  L
Sbjct: 1   MRAKTAEDRALLELIDPVAESLGLAVVRVRLMGGTLRRRLQIMAERQTDHDISVEECARL 60

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+A+S +LD  + I G Y LEVSSPGIDRP+ R  DF  + G     E       +++  
Sbjct: 61  SRAVSEVLDAADPISGEYLLEVSSPGIDRPLTRLIDFDLFEGLEARLETDRMVEGRKRFK 120

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR--ASLNNYGSYA 190
           G + GT      ++ +        +    I F  L  A+L++TDELL+  A+L       
Sbjct: 121 GVVAGTEGENIAIDLDG------EDETALIPFAWLADAKLVLTDELLKRGAALRAARGEP 174


>gi|229031447|ref|ZP_04187447.1| hypothetical protein bcere0028_35010 [Bacillus cereus AH1271]
 gi|228729736|gb|EEL80716.1| hypothetical protein bcere0028_35010 [Bacillus cereus AH1271]
          Length = 164

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 6/164 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 5   RRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDS-EKGVDIEECGA 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 64  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMF 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK++    T   L    +  K     +I IS D + +ARL VT
Sbjct: 124 EGKLLSYDGTTITLLLTIKTRKK----EIQISMDKVANARLAVT 163


>gi|259586209|sp|A3QGU7|RIMP_SHELP RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   +E +      +  +   K+ +L+++++  +  + + DC ++S+ IS +
Sbjct: 4   LESKLEQMLIAPVEALGHSLWGLEYVQAGKHSVLRVYIDN-ENGIFIDDCADVSRQISAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     + R+ G  V  ++ +     + L G + G  
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYARYLGETVKVQLTMPVAGSRNLKGTVAGVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQMLTLTVDG--------NELIIALDNIRKGNLI 148


>gi|157376523|ref|YP_001475123.1| hypothetical protein Ssed_3391 [Shewanella sediminis HAW-EB3]
 gi|157318897|gb|ABV37995.1| protein of unknown function DUF150 [Shewanella sediminis HAW-EB3]
          Length = 172

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 10/161 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEEL 72
           R      +   +  +++  +E +      +  +   K+ +L+++++  +  + + DC E 
Sbjct: 18  RGVTLATIENRLEEMLKSPVEALGHTLWGLEYVQAGKHSILRVYIDN-EKGIFIEDCAET 76

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S +LDVE+ I   Y LEVSSPG+DRP+ +   +  +    V  ++ +     + L 
Sbjct: 77  SRQVSAVLDVEDPISTEYTLEVSSPGVDRPLFKAEQYAAYIDETVKIQLTMPVAGSRNLK 136

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G I G       L  +          ++ I+ D++    LI
Sbjct: 137 GTITGIEGQMLSLTVDG--------NELIIALDNIRKGNLI 169


>gi|229592638|ref|YP_002874757.1| hypothetical protein PFLU5255 [Pseudomonas fluorescens SBW25]
 gi|229364504|emb|CAY52354.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 173

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I      ++ +L++++++ +G + + DC  +S+ IS +LD
Sbjct: 27  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDK-EGGVLVDDCAIVSRQISGVLD 85

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 86  VEDPISVEYTLEVSSPGMERPLFTIDQFAKFAGEQVKIKLRSPFEGRRNFQGLLRGV--- 142

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I + +
Sbjct: 143 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPSFD 173


>gi|312963085|ref|ZP_07777570.1| hypothetical protein PFWH6_5007 [Pseudomonas fluorescens WH6]
 gi|311282596|gb|EFQ61192.1| hypothetical protein PFWH6_5007 [Pseudomonas fluorescens WH6]
          Length = 173

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I      ++ +L++++++ +G + + DC  +S+ IS +LD
Sbjct: 27  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDK-EGGVLVDDCAIVSRQISGVLD 85

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 86  VEDPISVEYTLEVSSPGMERPLFTIEQFAKFAGEQVKIKLRSPFEGRRNFQGLLRGV--- 142

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I + +
Sbjct: 143 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPSFD 173


>gi|84387287|ref|ZP_00990308.1| hypothetical protein V12B01_22696 [Vibrio splendidus 12B01]
 gi|86148619|ref|ZP_01066902.1| hypothetical protein MED222_21704 [Vibrio sp. MED222]
 gi|218710447|ref|YP_002418068.1| hypothetical protein VS_2484 [Vibrio splendidus LGP32]
 gi|254765031|sp|B7VJH9|RIMP_VIBSL RecName: Full=Ribosome maturation factor rimP
 gi|84377934|gb|EAP94796.1| hypothetical protein V12B01_22696 [Vibrio splendidus 12B01]
 gi|85833610|gb|EAQ51785.1| hypothetical protein MED222_21704 [Vibrio sp. MED222]
 gi|218323466|emb|CAV19643.1| conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 151

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
            GL   ++ ++   +    +  V +  +    +  L+I+++  +  + + DC E+S  +S
Sbjct: 2   TGLERQLTEMLDAPVAASGYELVGLEFIRAGEHSTLRIYIDSPN-GINVDDCSEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++DVE+ I   Y LEVSSPG++RP+ +   + ++ GH V+  + ++ G+++K  G I  
Sbjct: 61  AVMDVEDPISVAYNLEVSSPGLERPLFKAEHYQQFIGHEVSIVLKMAVGNRRKWKGDIQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +  E + E             ++  A LI 
Sbjct: 121 IEGETVKVLVEGQEE--------EFVLSNIAKANLIP 149


>gi|70734335|ref|YP_257975.1| hypothetical protein PFL_0842 [Pseudomonas fluorescens Pf-5]
 gi|91208376|sp|Q4KIF8|RIMP_PSEF5 RecName: Full=Ribosome maturation factor rimP
 gi|68348634|gb|AAY96240.1| 15 kDa protein [Pseudomonas fluorescens Pf-5]
          Length = 158

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+  + +    I      ++ LL++++++ +G + + DC  +S+ IS +LD
Sbjct: 12  EQLQALLAPVVVALGYECWGIEFSAQGRHSLLRVYIDK-EGGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 71  VEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKLRSPFEGRRNFQGLLRG---- 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     +++ +  +  D +  A +I + +
Sbjct: 127 ----VEEQDVVVQVDDHEFLLPIDMIDKANIIPSFD 158


>gi|229544432|ref|ZP_04433490.1| protein of unknown function DUF150 [Bacillus coagulans 36D1]
 gi|229324917|gb|EEN90594.1| protein of unknown function DUF150 [Bacillus coagulans 36D1]
          Length = 155

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  +  PV+E +    V I  ++  KN  L++++++ +  + + +C  +S+ + 
Sbjct: 2   SKVVEVVEQLASPVVEGLGLELVDIEYVKEGKNWFLRVYIDK-ENGVDIEECGLVSERLG 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I  +Y LEVSSPG +RP+ +  DF R  G  V  +       ++   GK++ 
Sbjct: 61  EKLDEVDPIPHNYFLEVSSPGAERPLKKARDFERAVGRTVLVKTYEPLDGEKTFQGKLIA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  LE + + +K     +  I +D + +ARL V
Sbjct: 121 FHNGCLTLECKVKTKKI----EKEIPYDKVANARLAV 153


>gi|288940249|ref|YP_003442489.1| hypothetical protein Alvin_0500 [Allochromatium vinosum DSM 180]
 gi|288895621|gb|ADC61457.1| protein of unknown function DUF150 [Allochromatium vinosum DSM 180]
          Length = 151

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ + + V+E + +  V +    +     L+++++  +  +TL DC  +S  +S +L
Sbjct: 5   DSQLTLLARRVVEPLGYELVGVEYFQKGGGATLRVYIDH-ERGITLDDCTAVSHQLSGVL 63

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG+DRP+V    F R+ G  V   +      ++KL G ++G   
Sbjct: 64  DVEDPISDQYDLEVSSPGLDRPLVFPEHFERFAGSRVRIRLSEKIEGRRKLEGVLLGVVP 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  L  ++R           I   S+ SARLI 
Sbjct: 124 GGVALRADERDW--------EIPLTSIDSARLIP 149


>gi|91228265|ref|ZP_01262201.1| hypothetical protein V12G01_21798 [Vibrio alginolyticus 12G01]
 gi|91188142|gb|EAS74444.1| hypothetical protein V12G01_21798 [Vibrio alginolyticus 12G01]
          Length = 141

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 73/148 (49%), Gaps = 10/148 (6%)

Query: 28  VIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++   +    +  V +  +    +  L+I+++  +  + + DC E+S  +S +LDVE+ I
Sbjct: 1   MLDAPVAASGYELVGLEFIRAGAHSTLRIYIDH-ENGINVDDCAEVSHQVSAVLDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG++RP+ + + + ++ GH V+  + ++  +++K  G I G       + 
Sbjct: 60  SVAYSLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVANRRKWKGIIHGVDGETVTIT 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLIV 174
            + + E          +  ++  A LI 
Sbjct: 120 VDGQQE--------EFALSNISKANLIP 139


>gi|295399849|ref|ZP_06809830.1| protein of unknown function DUF150 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111639|ref|YP_003989955.1| hypothetical protein GY4MC1_2648 [Geobacillus sp. Y4.1MC1]
 gi|294978252|gb|EFG53849.1| protein of unknown function DUF150 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216740|gb|ADP75344.1| protein of unknown function DUF150 [Geobacillus sp. Y4.1MC1]
          Length = 157

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ P++ +M    V I  ++  KN  L++F++ D+  + +  C  +S+ 
Sbjct: 1   MSKKVTSIVEELVTPILADMDLELVDIEYVKEGKNWFLRVFIDSDE-GVDIEQCGTVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ + +DF R  G  V  +       +++  G++
Sbjct: 60  LSEKLDEVDPIPHNYFLEVSSPGAERPLKKPADFTRAIGKHVYIKTYEPIEGEKEFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G       +  + +  K      I I ++ + SARL V
Sbjct: 120 TGFDGKIVSVTVKDKTRKK----TIDIPYEKVASARLAV 154


>gi|332306995|ref|YP_004434846.1| hypothetical protein Glaag_2637 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174324|gb|AEE23578.1| protein of unknown function DUF150 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 152

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 81/160 (50%), Gaps = 10/160 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ ++   +E + F  V I  +   K+  ++++++  D  +T+  C E+S  +S
Sbjct: 2   SQLEQKLTEMLTAPVEALGFEMVGIEFVRAGKHSTMRVYIDHPD-GITVDHCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ +   ++   G VV   + +  GD++   GK++ 
Sbjct: 61  AVLDVEDPINTEYNLEVSSPGMERPLFKLQHYIDSVGEVVTLRLKMPMGDRRNFKGKLLS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            ++    +E +          +  ++F ++    ++ T +
Sbjct: 121 EADGMLTIEVDN--------QEFVLAFANIEKGNVVPTFD 152


>gi|256821529|ref|YP_003145492.1| hypothetical protein Kkor_0303 [Kangiella koreensis DSM 16069]
 gi|256795068|gb|ACV25724.1| protein of unknown function DUF150 [Kangiella koreensis DSM 16069]
          Length = 150

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M    ++  +I+P +E   F    +  L + K+ +L++F++  +  +++ +C E+S  +S
Sbjct: 1   MARNAELEKIIRPAVEAAGFEFWGLEHLAQGKHSVLRVFIDH-ENGISVDNCAEVSHQVS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I+G Y LE+SSPG+DRP+  +  F R+ G     ++ +    ++K  G I  
Sbjct: 60  GVLDVEDPIKGLYNLEISSPGMDRPLFNEQQFARYVGEDAEVKLSVPLNGRRKFKGTIEQ 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  L  +             I+   +  A L+ 
Sbjct: 120 VEAGVLLLLVDGE--------VYEINCHQIDKAHLVP 148


>gi|49610183|emb|CAG73625.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 140

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +  + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVAALGYELVGIEFIRSRQSTLRIYIDSED-GITVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG++RP+   + +L + G  VA  + ++  +++K +G I         +  
Sbjct: 60  VAYNLEVSSPGLERPLFTAAHYLHFVGEEVAVVLRMAVQNRRKWLGVIKAVDGEMITITV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|88705683|ref|ZP_01103393.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88700196|gb|EAQ97305.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 167

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 11/175 (6%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVER 59
           M+   F+ +  + R          + +++ P +E + F        ++ K+ +L++++E 
Sbjct: 1   MDQRRFVVAADDRRRAM-SARENKLQALLAPTVEALGFELWGTEYLIQGKHSVLRLYIES 59

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
            +  + + DC  +S+ +  +LDVE  I G Y LEVSSPG+DR + R   +  + G  V  
Sbjct: 60  -ENGVQVTDCAAVSEQVGALLDVEEPISGEYVLEVSSPGVDRRLFRLEQYPGYVGEEVEL 118

Query: 120 EIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +      ++K  G + G  +    L  +          +  + F  +  A+L +
Sbjct: 119 RLRSPFEGRRKFKGILRGVEDEDIVLLVDD--------HEYLLPFGDVDRAQLTL 165


>gi|297584077|ref|YP_003699857.1| hypothetical protein Bsel_1784 [Bacillus selenitireducens MLS10]
 gi|297142534|gb|ADH99291.1| protein of unknown function DUF150 [Bacillus selenitireducens
           MLS10]
          Length = 156

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  + +P++ E     V I  ++  KN  L++F++  +  + L  C  +S+ 
Sbjct: 1   MSSAITDKVEKLAEPIVSEAGLELVDIEFVKEGKNWFLRVFIDGPE-GVDLDHCSTVSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + IE  Y LEVSSPG +RP+ +  D  +  G  V         D++   GK+
Sbjct: 60  LSEKLDQSDPIEQAYYLEVSSPGAERPLKKAEDITKAIGKNVHVATYAPIEDEKVFEGKL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +G       +E     +      Q+ I +D +  ARL V
Sbjct: 120 IGFDGETLTVE----QKIKTRVSQVEIPYDKVSKARLAV 154


>gi|85712988|ref|ZP_01044026.1| Alpha-hemolysin-like protein, hlyA family protein [Idiomarina
           baltica OS145]
 gi|85693157|gb|EAQ31117.1| Alpha-hemolysin-like protein, hlyA family protein [Idiomarina
           baltica OS145]
          Length = 167

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +S +++P +E + F    I  +   K   L+I++++++  +++ DC ++S  +S +
Sbjct: 19  IEERLSDMLRPAVEALGFELWGIEFVRAGKFSTLRIYIDKEE-GISVDDCADVSYQVSSV 77

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++RP    +    + G  VA E+ ++  +K+K    + G  
Sbjct: 78  LDVEDPINTEYNLEVSSPGMERPFFSIAQMQPYIGETVAFELTVAKQNKRKFQAVLEGIE 137

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                L           +  + +    +  A L+ + +
Sbjct: 138 NDQLQLSV--------GQESLTVGMHEIKKAHLVPSFD 167


>gi|329847355|ref|ZP_08262383.1| hypothetical protein ABI_04190 [Asticcacaulis biprosthecum C19]
 gi|328842418|gb|EGF91987.1| hypothetical protein ABI_04190 [Asticcacaulis biprosthecum C19]
          Length = 205

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 11/171 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE----EKNLLLQIFVERD-DGNMTLRDC 69
           +         +  +  P+  E+    V++ L+          LQI  ER  DG + +  C
Sbjct: 1   MRAKTSEDRKLIDIFDPIANELGLNIVRVRLMGSNKPGGARRLQIMAERQSDGEINVNQC 60

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
             LS+A+S  LD  + I G Y LEVSSPGIDRP+ R  DF  + G+    E+   +  ++
Sbjct: 61  ARLSRALSAFLDEADPISGDYVLEVSSPGIDRPLTRLKDFETYQGYEARIELDRLAEGRK 120

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
           +  G + G       ++ E             + F  ++ A+L++TDEL++
Sbjct: 121 RFRGTLAGVEGDHIAIDLEG------EPETALMPFAWVIDAKLVLTDELMK 165


>gi|255066626|ref|ZP_05318481.1| hypothetical protein NEISICOT_01636 [Neisseria sicca ATCC 29256]
 gi|255049210|gb|EET44674.1| hypothetical protein NEISICOT_01636 [Neisseria sicca ATCC 29256]
          Length = 189

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 16/173 (9%)

Query: 3   STHFLHSKYEP---RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER 59
           S  F   +  P    +F   G   DI ++++  +  + +  V   L  +    L++F+++
Sbjct: 24  SQFFNFDEKWPLGHFLFMYSGRFMDIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK 81

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
            +G +T+ DC  +S  +S +  VE+I   +  LE+SSPG+DRP+ + +DF+R+ G     
Sbjct: 82  -EGGITVEDCATVSNHLSRVFMVEDI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKI 138

Query: 120 EIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +  L    ++  IG+I G       L  + +           I  D++  ARL
Sbjct: 139 KTRLPVDGQKNFIGRIEGCENDTVTLSFDGK--------TAQIGLDNIDKARL 183


>gi|126664887|ref|ZP_01735871.1| hypothetical protein MELB17_03575 [Marinobacter sp. ELB17]
 gi|126631213|gb|EBA01827.1| hypothetical protein MELB17_03575 [Marinobacter sp. ELB17]
          Length = 153

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 9/156 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++PV+E + +    I      +  LL++F++  +  + + DCE++S+ +S ++D
Sbjct: 6   KQLEDILRPVVEGLGYEYWGIEFRARGHESLLRLFIDDVEKGIGIEDCEKVSRQVSSVMD 65

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I+  Y LEVSSPG+DRP+   + +  + GH V   + ++   ++K  G + G    
Sbjct: 66  VEDPIQSEYTLEVSSPGMDRPLFELAQYQAFVGHKVQIRLRMAFEGRRKFQGLLNGIEG- 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                        +++ +  + FDS+  A ++   E
Sbjct: 125 -------DDVIVVVDDHEFLLPFDSIDKANIVPVFE 153


>gi|46578926|ref|YP_009734.1| hypothetical protein DVU0511 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603473|ref|YP_967873.1| hypothetical protein Dvul_2430 [Desulfovibrio vulgaris DP4]
 gi|51316683|sp|Q72EQ8|RIMP_DESVH RecName: Full=Ribosome maturation factor rimP
 gi|166987475|sp|A1VG80|RIMP_DESVV RecName: Full=Ribosome maturation factor rimP
 gi|46448338|gb|AAS94993.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563702|gb|ABM29446.1| protein of unknown function DUF150 [Desulfovibrio vulgaris DP4]
 gi|311232784|gb|ADP85638.1| protein of unknown function DUF150 [Desulfovibrio vulgaris RCH1]
          Length = 172

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 4/161 (2%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                L   I+ +  P +  +      I L      ++++FV+  +  +T+  C E+S+ 
Sbjct: 1   MTKQALDATIADMAGPFLASLGLELWGIELSYGGRTVVRLFVDGPE-GVTIDQCAEVSRH 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS---SGDKQKLI 132
           +   L+VE++I   Y LEVSSPG++RP  R      + G  +   ++        ++K  
Sbjct: 60  VGLALEVEDVISSAYVLEVSSPGLERPFFRAEQMSPYVGRQIELTLIDPTPEWPGRRKFR 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G+++        L  E     +  E  +  S+  +  A LI
Sbjct: 120 GELLAVEGDTVVLRPEGAPAPEAEEAVLRTSWQGVRKANLI 160


>gi|108761060|ref|YP_630294.1| hypothetical protein MXAN_2065 [Myxococcus xanthus DK 1622]
 gi|122389560|sp|Q1DAM9|RIMP_MYXXD RecName: Full=Ribosome maturation factor rimP
 gi|108464940|gb|ABF90125.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 161

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 10/160 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
              +     ++++P++       V +  L E+   +L++F+++  G + L +C ++S+A+
Sbjct: 7   KQTVEERALALLEPIVAGEGLELVDLEFLREREGWVLRLFIDKPGGRVGLDECTQVSRAV 66

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGK 134
            P LDVE+ I   Y LEVSSPG+DRP+ + + F R  G  V  +     G+  ++   G 
Sbjct: 67  DPSLDVEDFIPHEYNLEVSSPGVDRPLRKPTHFERVKGQQVKVKTFGPVGEPPRKNFTGT 126

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   +  G  +E E  G          I F  +  A L  
Sbjct: 127 LTEVAGDGISVEVEGAG-------TFHILFKDIAKANLEF 159


>gi|319649524|ref|ZP_08003680.1| hypothetical protein HMPREF1013_00284 [Bacillus sp. 2_A_57_CT2]
 gi|317398686|gb|EFV79368.1| hypothetical protein HMPREF1013_00284 [Bacillus sp. 2_A_57_CT2]
          Length = 155

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  ++ P+++E++   V I  ++  K+  L++F+++ +  + + +C  +S+ +S
Sbjct: 2   SKVTETVEQLVTPIVDELNLELVDIEYVKEGKDWFLRVFIDK-ETGVDIEECGTVSERLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I  +Y LEVSSPG +RP+ + SDF++  G  V  +       ++   G +  
Sbjct: 61  EKLDAEDPIPYNYFLEVSSPGAERPLKKDSDFVKAVGKNVFIKTYEPIDGEKTFEGVLTQ 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E   +  K     +I I ++ + +ARL V
Sbjct: 121 FDGETVTVEVTIKTRKK----RIEIPYEKVANARLAV 153


>gi|66047409|ref|YP_237250.1| hypothetical protein Psyr_4182 [Pseudomonas syringae pv. syringae
           B728a]
 gi|71733923|ref|YP_276313.1| hypothetical protein PSPPH_4191 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289676022|ref|ZP_06496912.1| hypothetical protein PsyrpsF_22296 [Pseudomonas syringae pv.
           syringae FF5]
 gi|34223096|sp|P95578|RIMP_PSEU2 RecName: Full=Ribosome maturation factor rimP
 gi|91208357|sp|Q48E75|RIMP_PSE14 RecName: Full=Ribosome maturation factor rimP
 gi|1835603|gb|AAC45133.1| 15 kDa protein [Pseudomonas syringae pv. syringae]
 gi|63258116|gb|AAY39212.1| Protein of unknown function DUF150 [Pseudomonas syringae pv.
           syringae B728a]
 gi|71554476|gb|AAZ33687.1| YhbC-like protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 158

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I      K+ +L+I++++ +G + + DC  +S+ IS +LD
Sbjct: 12  EQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDK-EGGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 71  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRG---- 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I T +
Sbjct: 127 ----VEEQDVVVQVEDHEFLLPIDMIDKANIIPTFD 158


>gi|319787429|ref|YP_004146904.1| hypothetical protein Psesu_1831 [Pseudoxanthomonas suwonensis 11-1]
 gi|317465941|gb|ADV27673.1| protein of unknown function DUF150 [Pseudoxanthomonas suwonensis
           11-1]
          Length = 192

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 17/163 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN--------MTLRDCEEL 72
             +I  ++ P +E +    + +  L       L+++++             +T+ DCE +
Sbjct: 5   TSEIVQLLAPTVESLGLELLGVEYLPAPGGATLRLYIDVPAAGEGEEPARTVTIEDCEAV 64

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LDV + I G+Y LEVSSPG+DRP+     F+R+ G      + L    +++L 
Sbjct: 65  SREVSAQLDVADPISGNYTLEVSSPGMDRPLFAAEHFIRFLGQQAKVGLKLPQDGRRRLQ 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           G I+  ++       +          +  ++ D++  ARL+  
Sbjct: 125 GTILRVADGQVAFGLDN--------AEFVVALDNIDKARLVPD 159


>gi|257482263|ref|ZP_05636304.1| hypothetical protein PsyrptA_03277 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289624600|ref|ZP_06457554.1| hypothetical protein PsyrpaN_05581 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|298488454|ref|ZP_07006485.1| 30S ribosomal subunit maturation factor [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|302185430|ref|ZP_07262103.1| hypothetical protein Psyrps6_03769 [Pseudomonas syringae pv.
           syringae 642]
 gi|298157079|gb|EFH98168.1| 30S ribosomal subunit maturation factor [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322530|gb|EFW78623.1| hypothetical protein PsgB076_21417 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330001|gb|EFW85988.1| hypothetical protein PsgRace4_10252 [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330868244|gb|EGH02953.1| ribosome maturation protein RimP [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330875222|gb|EGH09371.1| ribosome maturation protein RimP [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330888660|gb|EGH21321.1| ribosome maturation protein RimP [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330895307|gb|EGH27645.1| ribosome maturation protein RimP [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330937944|gb|EGH41731.1| ribosome maturation protein RimP [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330950307|gb|EGH50567.1| ribosome maturation protein RimP [Pseudomonas syringae Cit 7]
 gi|330969649|gb|EGH69715.1| ribosome maturation protein RimP [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330981088|gb|EGH79191.1| ribosome maturation protein RimP [Pseudomonas syringae pv. aptata
           str. DSM 50252]
 gi|330987053|gb|EGH85156.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011497|gb|EGH91553.1| ribosome maturation protein RimP [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 152

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I      K+ +L+I++++ +G + + DC  +S+ IS +LD
Sbjct: 6   EQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDK-EGGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I T +
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPTFD 152


>gi|251792721|ref|YP_003007447.1| hypothetical protein NT05HA_0985 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534114|gb|ACS97360.1| protein YhbC [Aggregatibacter aphrophilus NJ8700]
          Length = 151

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I      + L +++F+++ +G +T+ DC  +S+ +S +
Sbjct: 4   LEQKLQELVQGSVEDLGCELWGIECQRVGRYLTVRLFIDK-EGGVTVEDCAYVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + F R+ G  +   + +   D++K  G++    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLNQFERYLGQEILLHLRIPVADRRKWQGQLAKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  + +        +  ++F ++  A +I 
Sbjct: 123 NDMITLIVDGK--------EQVLAFGNIQKANVIP 149


>gi|330830890|ref|YP_004393842.1| ribosome maturation factor rimP [Aeromonas veronii B565]
 gi|328806026|gb|AEB51225.1| Ribosome maturation factor rimP [Aeromonas veronii B565]
          Length = 145

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 77/152 (50%), Gaps = 10/152 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++  +  + F    I  +   K+  L+++++  +  +T+ +C E+S  +  I+DVE
Sbjct: 1   MTDLLEAPVVALGFELWGIEFIRAGKHSTLRVYIDG-EQGVTVENCAEVSHQVGAIMDVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+ + + F ++ G   A  + +++ +++K  G I        
Sbjct: 60  DPITEEYYLEVSSPGLDRPLFKVAHFEKYVGQEAAVTLRMATNNRRKFKGVIKAVQGDMI 119

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            L  + + +         ++F ++  A ++  
Sbjct: 120 TLAVDGKDDV--------LAFTNIQKANIVPN 143


>gi|238918422|ref|YP_002931936.1| hypothetical protein NT01EI_0465 [Edwardsiella ictaluri 93-146]
 gi|238867990|gb|ACR67701.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 140

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V I  +  ++  L+I+++ ++  +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGFELVGIEFIRGRHSTLRIYIDSEE-GITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG++RP+     + R+    V   + ++  +++K  G I         +  
Sbjct: 60  VAYYLEVSSPGMERPLFIAEHYTRFLNEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           + + E          +  ++  A L+ 
Sbjct: 120 DGKDEV--------FALSNVQKANLVP 138


>gi|147677600|ref|YP_001211815.1| hypothetical protein PTH_1265 [Pelotomaculum thermopropionicum SI]
 gi|259586176|sp|A5D2U8|RIMP_PELTS RecName: Full=Ribosome maturation factor rimP
 gi|146273697|dbj|BAF59446.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 153

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 10/160 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQ 74
                +   +  V  PV++E     V +   +E     L+IF+++  G + + DC+ +S+
Sbjct: 1   MAREKVLELVKRVTLPVVQEAGLELVDVEYAKEGGRYYLRIFIDKP-GGVRIEDCQHVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I  +LD  + I   Y LEVSSPGIDRP+ +  D++R+ G +   +       ++K  G+
Sbjct: 60  KIDRLLDELDPIPQSYFLEVSSPGIDRPLKKAGDYIRFAGRLARVKTFSPVEGRRKFTGR 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           I+G       ++ E +        +++I F  + SARL V
Sbjct: 120 IVGMHGEDVVMQVEGK--------EMSIPFKQIASARLEV 151


>gi|225181380|ref|ZP_03734824.1| protein of unknown function DUF150 [Dethiobacter alkaliphilus AHT
           1]
 gi|225167961|gb|EEG76768.1| protein of unknown function DUF150 [Dethiobacter alkaliphilus AHT
           1]
          Length = 151

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 9/157 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +A  ++++  P+ E++ F  V +  ++E + ++L++F++R +G +TL  C+E+S A+S
Sbjct: 2   SNIAERVTAIADPLAEKLGFELVDVEYVKEGSQMILRVFIDR-EGGITLDHCQEMSHALS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + IE  Y LEVSSPGI+RP+ +  DF+R+ G  V+ ++      K+K  G + G
Sbjct: 61  DELDRVDPIEQSYHLEVSSPGIERPLKKDEDFVRFAGKPVSIKLFAPLEGKKKYGGILRG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    LE E           + I    +  A L  
Sbjct: 121 LEEGEILLEVENN-------NLVRIPRTQVAKANLAF 150


>gi|237798561|ref|ZP_04587022.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|237803808|ref|ZP_04591393.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|237805250|ref|ZP_04591954.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021414|gb|EGI01471.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331025788|gb|EGI05844.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331026358|gb|EGI06413.1| ribosome maturation protein RimP [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 152

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I      K+ +L+I++++ +G + + DC  +S+ IS +LD
Sbjct: 6   EQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDK-EGGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRG---- 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I T +
Sbjct: 121 ----VEEQDVVVQVEDHEFLLPIDLIDKANIIPTFD 152


>gi|261820126|ref|YP_003258232.1| hypothetical protein Pecwa_0806 [Pectobacterium wasabiae WPP163]
 gi|261604139|gb|ACX86625.1| protein of unknown function DUF150 [Pectobacterium wasabiae WPP163]
          Length = 140

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +  + +  V I  +  +   L+I+++ +D  +T+ DC ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVAALGYELVGIEFIRSRQSTLRIYIDSED-GITVDDCADVSHQVSAVLDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG++RP+     +L + G  V   + ++  +++K +G I         +  
Sbjct: 60  VAYNLEVSSPGLERPLFTAEHYLHFIGEEVTVVLRMAVQNRRKWLGVINAVDGEMITITV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|169831085|ref|YP_001717067.1| hypothetical protein Daud_0922 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|226696028|sp|B1I359|RIMP_DESAP RecName: Full=Ribosome maturation factor rimP
 gi|169637929|gb|ACA59435.1| protein of unknown function DUF150 [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 154

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 9/160 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +AG +  + +P+ E      V++    E     L++F+++  G + L DCE +S+
Sbjct: 1   MAASDIAGRVEEMARPLAERKGLELVEVQYVTEGGRRYLRVFLDKP-GGINLDDCEAVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +   LD  + I   Y LEVSSPG++RP+ R  D++R+ G +V          ++K  G+
Sbjct: 60  ELDRALDDVDFIPHSYVLEVSSPGLERPLKRAEDYVRFKGRLVQINTYAPLNGRKKFSGR 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +MG+ E G  +                I +D +  ARL V
Sbjct: 120 LMGSGEEGVTILL-------GEHELATIPWDQISKARLAV 152


>gi|330958051|gb|EGH58311.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 152

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I      K+ +L+I++++ +G + + DC  +S+ IS +LD
Sbjct: 6   EQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDK-EGGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPITTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRG---- 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I T +
Sbjct: 121 ----VEEQDVVVQVEDHEFLLPIDLIDKANIIPTFD 152


>gi|331007795|ref|ZP_08330908.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC1989]
 gi|330418394|gb|EGG92947.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC1989]
          Length = 163

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 20/168 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVER-----------DDGNMTL 66
             +   ++++I+PV+E +  +   +   ++ +   L+I++E+            +  + L
Sbjct: 2   SSVQNKLTALIEPVVESLGCQLWGLEYLVQGRQATLRIYIEKAADSESSDDTKKESGVGL 61

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DCE++S+ +S +LDVE+ I  HY LEVSSPG+DRP+   + +    G  V+ ++     
Sbjct: 62  HDCEKVSRQVSSVLDVEDPISSHYTLEVSSPGMDRPLFLLAHYHSSVGEKVSIKLSRKFD 121

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           D++  IG I G  +    L  E        E +  +  + +  A +I 
Sbjct: 122 DRKNFIGVIAGVEDDEVILRVE--------EEEYVLPIELIDKANIIP 161


>gi|109898013|ref|YP_661268.1| hypothetical protein Patl_1693 [Pseudoalteromonas atlantica T6c]
 gi|122972050|sp|Q15V74|RIMP_PSEA6 RecName: Full=Ribosome maturation factor rimP
 gi|109700294|gb|ABG40214.1| protein of unknown function DUF150 [Pseudoalteromonas atlantica
           T6c]
          Length = 152

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 81/160 (50%), Gaps = 10/160 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   ++ ++   +E + F  V I  +   K+  ++++++  D  +++  C E+S  +S
Sbjct: 2   SQLEQKLTEMLTAPVEALGFEMVGIEFVRAGKHSTMRVYIDHPD-GISVDHCAEVSHQVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPG++RP+ +   ++   G VV   + +  GD++   GK++ 
Sbjct: 61  AVLDVEDPINTEYNLEVSSPGMERPLFKLQHYIESVGEVVTLRLKMPMGDRRNFKGKLLS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            ++    +E +          +  ++F ++    ++ T +
Sbjct: 121 EADGMLTIEVDN--------QEFVLAFANIEKGNVVPTFD 152


>gi|330807481|ref|YP_004351943.1| Sm_like superfamily [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375589|gb|AEA66939.1| Conserved hypothetical protein; Sm_like superfamily [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 152

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PV+  + +    I      ++ LL++++++ +G + + DC  +S+ IS +LD
Sbjct: 6   EQLQALLAPVVVALGYECWGIEFSAQGRHSLLRVYIDK-EGGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPITSEYTLEVSSPGMERPLFTLEQFASFAGEQVKIKLRSPFEGRRNFQGLLRG---- 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     +++ +  +  D +  A +I + +
Sbjct: 121 ----VEEQDVVVQVDDHEFLLPIDMIDKANIIPSFD 152


>gi|330504829|ref|YP_004381698.1| hypothetical protein MDS_3915 [Pseudomonas mendocina NK-01]
 gi|328919115|gb|AEB59946.1| hypothetical protein MDS_3915 [Pseudomonas mendocina NK-01]
          Length = 152

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PVIE + ++   I    + ++ LL++++++ D  + + DCE +S+ +S +LD
Sbjct: 6   EQLQALLAPVIEALGYQCWGIEFLSQGRHSLLRVYIDKAD-GILIDDCEIVSRQLSGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 65  VEDPISSEYTLEVSSPGMDRPLFTLEQFAAHVGEQVKIKLRSPFDGRRNFQGLLRG---- 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     +++ +  +  D +  A +I   +
Sbjct: 121 ----VEEQDVVVQVDDHEYLLPIDLIDKANIIPRFD 152


>gi|154686076|ref|YP_001421237.1| hypothetical protein RBAM_016430 [Bacillus amyloliquefaciens FZB42]
 gi|189038972|sp|A7Z4T0|RIMP_BACA2 RecName: Full=Ribosome maturation factor rimP
 gi|154351927|gb|ABS74006.1| YlxS [Bacillus amyloliquefaciens FZB42]
          Length = 156

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  + QP+++++    V I  ++E  N  L++F++  +  + + +C ++S+A
Sbjct: 1   MSKKVTDTVQEMAQPILDDLQLELVDIEFVKEGQNWFLRVFIDS-ENGVDIEECAKVSEA 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +        +   GK+
Sbjct: 60  LSEKLDEADPITQNYFLEVSSPGAERPLKKKADFEKSLGKNVYMKTYEPIDGLKVFEGKL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                    +E   +  K     ++ I ++ + +ARL VT
Sbjct: 120 AEFDGQTVTIEMTVKTRKK----RVNIPYEKIANARLAVT 155


>gi|149909282|ref|ZP_01897938.1| hypothetical protein PE36_05678 [Moritella sp. PE36]
 gi|149807599|gb|EDM67547.1| hypothetical protein PE36_05678 [Moritella sp. PE36]
          Length = 152

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +++P +E + F  V I      K+  L ++++  +  + + DC ++S  +S 
Sbjct: 3   SLEQTLTDLLEPTVEMLGFELVGIEFTRAGKHSTLLVYIDH-ENGIFVDDCSKVSHQLSA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           I+DVE+ I   Y LEVSSPG++RP+ + + +  + G  +   + ++   ++KL G I   
Sbjct: 62  IMDVEDPISTEYFLEVSSPGMERPLFKVAHYQEYCGSEIKALLRMAVNGRRKLRGVIKSV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +  + + E          +  +   A ++ 
Sbjct: 122 DGDMITVTIDGKDEV--------FAHANFQKANIVP 149


>gi|296108418|ref|YP_003620119.1| putative protein conserved in bacteria [Legionella pneumophila
           2300/99 Alcoy]
 gi|295650320|gb|ADG26167.1| putative protein conserved in bacteria [Legionella pneumophila
           2300/99 Alcoy]
 gi|307611646|emb|CBX01333.1| hypothetical protein LPW_30281 [Legionella pneumophila 130b]
          Length = 131

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 10/138 (7%)

Query: 36  MSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
           M +         + K+ LL+I++++ D  + + DC+E+S+ +S +LDVE+ I GHY LE+
Sbjct: 1   MGYELWGCEYLSQGKHSLLRIYIDKPD-GIGIDDCQEVSKQVSAMLDVEDPIPGHYSLEI 59

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPGI RP+     + R+ G+ +  +       K+KL G I+  SE    L+     +  
Sbjct: 60  SSPGIPRPLFSIWQYQRYLGYEIHVKTFKPVNGKRKLSGIIVSASEDTIVLDINNEHQ-- 117

Query: 155 MNELQIAISFDSLLSARL 172
                  I   +++ A L
Sbjct: 118 ------EILLSNIVKANL 129


>gi|148244224|ref|YP_001218918.1| hypothetical protein COSY_0057 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166919105|sp|A5CXX4|RIMP_VESOH RecName: Full=Ribosome maturation factor rimP
 gi|146326051|dbj|BAF61194.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 153

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ +I+PVIE M +  + I  +   K  +L+IF++  + ++++ DCE +S+ +S I
Sbjct: 4   VTDKITHLIKPVIEGMGYELLGIEYVASGKYSILRIFIDT-NKSISVNDCEIVSRQLSSI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            D+E  I G Y LEVSSPGI+RP+  K  +  + G  V   +      +    G I   S
Sbjct: 63  FDIEEPISGQYNLEVSSPGIERPLFHKGHYQCFLGFNVKLHMFRPISGQSNFFGVIGSVS 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           E    +E             I +  D +  A L+V 
Sbjct: 123 EINNTIELVGEL------GAIILDIDLIKKANLVVD 152


>gi|262042728|ref|ZP_06015882.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039953|gb|EEW41070.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 140

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++   +E + F  V I  +  +   L+I+++ +D  + + DC ++S  +S ++DVE+ I 
Sbjct: 1   MLTAPVEALGFELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVMDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++KL G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYQRFTGEEVALVLRMAVQNRRKLQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|325294241|ref|YP_004280755.1| ribosome maturation factor rimP [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064689|gb|ADY72696.1| Ribosome maturation factor rimP [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 162

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 84/155 (54%), Gaps = 7/155 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  ++ P++EE  F  V I  + E    +L+I+ +R +G +T+ DC+ +S+ I 
Sbjct: 6   KEIVDRVKELLFPILEEGGFELVDIEFVREPIGWVLRIYADRPEGGITISDCQWISERIG 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD+E++I   Y LEVSSPG++RP+  + DF R  G VV  +      +++   G+++ 
Sbjct: 66  TLLDIEDLIPHAYNLEVSSPGLNRPLKNQRDFERNLGTVVKIKTHEPMDNQRNFKGEVIS 125

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            SE+   +             ++ I F+++ SAR+
Sbjct: 126 ASESAVVI------HDVSRNAEVEIPFENIKSARI 154


>gi|188586066|ref|YP_001917611.1| protein of unknown function DUF150 [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|226734162|sp|B2A393|RIMP_NATTJ RecName: Full=Ribosome maturation factor rimP
 gi|179350753|gb|ACB85023.1| protein of unknown function DUF150 [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 154

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 9/152 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            I ++I+P + ++ +  V + L+ E    +L+++++     + L DCE +S ++  +LD 
Sbjct: 9   QIENIIEPAVRDLGYDLVDVELIMENQKWVLRVYIDH-GKGIGLDDCELVSNSLDQLLDE 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I   Y LEVSSPG +RP+ +K DF+ + G  V  +  +    ++   GK++G  +  
Sbjct: 68  HDPIPHSYVLEVSSPGAERPLKKKKDFVNFAGKKVQIKTYVKLDGRKNFKGKLLGLEDEH 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             LE         N  ++ I  D +  A L++
Sbjct: 128 VVLE-------TFNSGEVKIPLDKIAKANLLL 152


>gi|146308625|ref|YP_001189090.1| hypothetical protein Pmen_3610 [Pseudomonas mendocina ymp]
 gi|166990870|sp|A4XYE2|RIMP_PSEMY RecName: Full=Ribosome maturation factor rimP
 gi|145576826|gb|ABP86358.1| protein of unknown function DUF150 [Pseudomonas mendocina ymp]
          Length = 152

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + +++ PVIE + ++   I    + ++ LL++++++ D  + + DCE +S+ +S +LD
Sbjct: 6   EQLQALLAPVIEALGYQCWGIEFLSQGRHSLLRVYIDKAD-GILIDDCEIVSRQLSGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG+DRP+     F    G  V  ++      ++   G + G    
Sbjct: 65  VEDPISSEYTLEVSSPGMDRPLFTLEQFAAHVGEQVKIKLRSPFEGRRNFQGLLRG---- 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     +++ +  +  D +  A +I   +
Sbjct: 121 ----VEEQDVVVQVDDHEYLLPIDLIDKANIIPRFD 152


>gi|91208372|sp|Q3KI86|RIMP_PSEPF RecName: Full=Ribosome maturation factor rimP
          Length = 158

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I      ++ +L++++++ +G + + DC  +S+ IS +LD
Sbjct: 12  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDK-EGGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 71  VEDPISVEYTLEVSSPGMERPLFTLEQFAKYVGEQVKIKLRSPFEGRRNFQGLLRG---- 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     +   +  +  D +  A +I + +
Sbjct: 127 ----VEEQDVVVQVENHEFLLPIDMIDKANIIPSFD 158


>gi|229918665|ref|YP_002887311.1| hypothetical protein EAT1b_2952 [Exiguobacterium sp. AT1b]
 gi|259585773|sp|C4L660|RIMP_EXISA RecName: Full=Ribosome maturation factor rimP
 gi|229470094|gb|ACQ71866.1| protein of unknown function DUF150 [Exiguobacterium sp. AT1b]
          Length = 156

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 6/158 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + S+  P++E  +   V +  ++E     L++++++  G + L DC  +++ +S
Sbjct: 2   SKITEVVESIALPIVERENMELVDVEFVKEGPDWFLRVYIDKP-GGVDLDDCVNINEQLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+  + IE  Y L+VSSPG +RP+ + SDF R  G  V  +        ++  G +  
Sbjct: 61  EKLNETDPIEQAYYLDVSSPGAERPLKKPSDFERAVGKNVYMKTFAPIDGAKEFEGILTA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                  +E          +  +++  D +  ARL VT
Sbjct: 121 YDGETVVIET----RIKTRKKAVSLPVDKIAQARLAVT 154


>gi|221232983|ref|YP_002515419.1| hypothetical protein CCNA_00044 [Caulobacter crescentus NA1000]
 gi|259585738|sp|B8GX01|RIMP_CAUCN RecName: Full=Ribosome maturation factor rimP
 gi|220962155|gb|ACL93511.1| hypothetical cytosolic protein [Caulobacter crescentus NA1000]
          Length = 191

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 12/181 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD------DGNMTLR 67
           + G      D+  ++ PV E + +  V++ L+   +   LQI  E         G+M + 
Sbjct: 1   MRGKTQEDRDLIEMLDPVAESLGYEIVRLRLMGGTEQRRLQIMAEHPLLEDGSGGDMNVE 60

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DC +LS+A+S +LD  + I G Y LEVSSPGIDRP+ R  DF  + G     E+   +  
Sbjct: 61  DCAKLSRAVSEVLDAADPIAGEYTLEVSSPGIDRPLTRLKDFDDYAGLEARIELDRVAEG 120

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G++ G  +    L  E       +++ +   F  ++ A+L++TD L+        
Sbjct: 121 RKRFKGELAGVEDDQVGLNIEGE-----DDVTVYFPFAWVIDAKLVMTDALMERGAKQRA 175

Query: 188 S 188
           +
Sbjct: 176 A 176


>gi|165936752|ref|ZP_02225319.1| protein YhbC [Yersinia pestis biovar Orientalis str. IP275]
 gi|165915401|gb|EDR34011.1| protein YhbC [Yersinia pestis biovar Orientalis str. IP275]
          Length = 134

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 9/141 (6%)

Query: 34  EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLE 93
           E + +  V I  +  +   L+I+++ DD  +T+  C ++S  +S +LDVE+ I   Y LE
Sbjct: 1   EALGYELVGIEFIRGRQSTLRIYIDSDD-GITVDACADVSHQVSAVLDVEDPITVAYNLE 59

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEK 153
           VSSPG+DRPM     + R+ G  V   + ++  +++K  G I         +  + + E 
Sbjct: 60  VSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTVDGKDEV 119

Query: 154 DMNELQIAISFDSLLSARLIV 174
                    +  ++  A L+ 
Sbjct: 120 --------FALSNIQKANLVP 132


>gi|89098597|ref|ZP_01171479.1| hypothetical protein B14911_00370 [Bacillus sp. NRRL B-14911]
 gi|89086559|gb|EAR65678.1| hypothetical protein B14911_00370 [Bacillus sp. NRRL B-14911]
          Length = 156

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 6/158 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  ++ P+++E++   V I  ++  K   L++F+++ +  + + +C  +S+ +S
Sbjct: 2   SKVTETVEELVTPIVDELNLELVDIEYVKEGKEWFLRVFIDK-EQGVDIEECGLVSERLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I  +Y LEVSSPG +RP+ ++ D+    G  V  +       ++   GK+  
Sbjct: 61  EKLDELDPIPYNYFLEVSSPGAERPLKKEKDYKSAIGKNVLIKTYEPIDGEKTFEGKLTQ 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                  +E             I+I ++ + +ARL VT
Sbjct: 121 FDGETVTVEV----RVKTRIKTISIPYEKVANARLAVT 154


>gi|329896245|ref|ZP_08271423.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC3088]
 gi|328921916|gb|EGG29283.1| clustered with transcription termination protein NusA [gamma
           proteobacterium IMCC3088]
          Length = 155

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 10/155 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
                +++ +++  +E M F    +    + KN LL+++++R +  + + DC ++S+ IS
Sbjct: 6   TKKEAELADLLRATVEAMGFALWGLEFRAQGKNSLLRVYIDR-EAGVQVDDCAQVSRQIS 64

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I G Y LEVSSPGIDR +       ++ G  +  ++ +    ++   G ++G
Sbjct: 65  GILDVEDPIAGEYNLEVSSPGIDRLLFSLEQCQQYVGEWLEVKLRVPFEGRKNFNGTLVG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +    +  +          +  + FDS+  A++
Sbjct: 125 IEDQDVVVRIDDD--------EYVLPFDSIDKAKV 151


>gi|152976183|ref|YP_001375700.1| hypothetical protein Bcer98_2469 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189039695|sp|A7GRE7|RIMP_BACCN RecName: Full=Ribosome maturation factor rimP
 gi|152024935|gb|ABS22705.1| protein of unknown function DUF150 [Bacillus cytotoxicus NVH
           391-98]
          Length = 156

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 82/160 (51%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
            D  +   + ++ QP++EE++   V +  ++  K+  L++F++  +  + + +C  +S+ 
Sbjct: 1   MDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVFIDS-ETGVDIEECGAVSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK+
Sbjct: 60  LSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +    T   L    +  K     +I I  D + +ARL VT
Sbjct: 120 LSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|289646959|ref|ZP_06478302.1| hypothetical protein Psyrpa2_04287 [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 152

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  V+ PV+  + ++   I      K+ +L+I++++ +G + + DC  +S+ IS +LD
Sbjct: 6   EQLQDVLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDK-EGGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I T +
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPTFD 152


>gi|157320498|gb|ABV39595.1| protein of unknown function DUF150 [Serratia proteamaculans 568]
          Length = 140

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++   +E + F  V I  +  +   L+I+++  +  + + DC ++S  +S +LDVE  I 
Sbjct: 1   MLSAPVEALGFELVGIEFIRARQSTLRIYIDS-ENGINVDDCADVSHQVSAVLDVEEPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG+DRPM     + R+ G  V+  + ++  +++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLDRPMFTAEHYTRFLGDEVSLVLRMAVQNRRKWQGIIKSVDGEMITVAV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E + E          +  ++  A L+ 
Sbjct: 120 EGKDEV--------FALSNIQKANLVP 138


>gi|258545584|ref|ZP_05705818.1| BCR/YhbC family protein [Cardiobacterium hominis ATCC 15826]
 gi|258519284|gb|EEV88143.1| BCR/YhbC family protein [Cardiobacterium hominis ATCC 15826]
          Length = 157

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 3/157 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++ +++PV+E M F  V +       N +L+I+V+R +G + +    E+++A++
Sbjct: 1   MSREERVTELLKPVVESMGFEWVGVEYHHNSVNAILRIYVDRPEGGIDMEGVVEVTEAVN 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           PILDVE+ I   Y LEVSSPG+DRP+   +DF+R+ G      +    G +++  G I  
Sbjct: 61  PILDVEDPINAPYTLEVSSPGLDRPLFSFADFVRFTGETAKVHLHAPVGKRRRFEGVIES 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           T ET   +    R  + +    + + + ++  ARL+ 
Sbjct: 121 TDETAQRITFAVRQGRAVEA--VEVDYANVDKARLVP 155


>gi|300721536|ref|YP_003710811.1| hypothetical protein XNC1_0503 [Xenorhabdus nematophila ATCC 19061]
 gi|297628028|emb|CBJ88577.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 140

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V +  +  +   L+++++ ++  +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVEALGFELVGLEFIRARVSTLRVYIDSEE-GITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+     + R+ G  V   + ++  ++++  G I         +  
Sbjct: 60  VLYNLEISSPGLERPLFTAEHYQRFIGEEVNVVLRMAMQNRRRWQGIIKAVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           + + E          +  ++  A L+ 
Sbjct: 120 DGKDEV--------FALSNIQKANLVP 138


>gi|296132884|ref|YP_003640131.1| protein of unknown function DUF150 [Thermincola sp. JR]
 gi|296031462|gb|ADG82230.1| protein of unknown function DUF150 [Thermincola potens JR]
          Length = 153

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++ +  P++E      V +  ++   +  L++F+++    ++L DC+ ++Q
Sbjct: 1   MAKSKIEDLVTELAVPIVENAGMELVDVEYVKEGAHWYLRVFIDKP-QGVSLDDCQMIAQ 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            + P+LD ++ I   Y LEVSSPG+DRP+ + +DF R+ G  V          K++ IG+
Sbjct: 60  RLDPLLDEKDPIPHEYMLEVSSPGLDRPLKKPADFARYAGRKVKVSTYAPIDGKKEFIGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  +    +      +        A+  D + S RL
Sbjct: 120 LKGLIDNEVVIGICGTDK--------ALPLDKVSSVRL 149


>gi|239946886|ref|ZP_04698639.1| UPF0090 protein [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921162|gb|EER21186.1| UPF0090 protein [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 166

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 91/164 (55%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +G  +++ DC + S+ IS I
Sbjct: 4   IEQQITNVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNGEKISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS G++RP+V+  ++ R++G  V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEDTYSLEVSSSGLERPLVKFENYNRFSGREVKIKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +L+ E        E ++ I +D + +A L++T+E+ +  L
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLL 159


>gi|308173622|ref|YP_003920327.1| RNA-binding protein [Bacillus amyloliquefaciens DSM 7]
 gi|307606486|emb|CBI42857.1| putative RNA-binding protein [Bacillus amyloliquefaciens DSM 7]
 gi|328553446|gb|AEB23938.1| ribosome maturation protein RimP [Bacillus amyloliquefaciens TA208]
 gi|328911763|gb|AEB63359.1| putative RNA-binding protein [Bacillus amyloliquefaciens LL3]
          Length = 156

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  + QP+++++    V I  ++E  N  L++F++  D  + + +C ++S+A
Sbjct: 1   MSKKVTDTVQEMAQPILDDLQLELVDIEFVKEGQNWFLRVFIDS-DNGVDIEECAKVSEA 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +        +   GK+
Sbjct: 60  LSEKLDEADPITQNYFLEVSSPGAERPLKKKADFEKSLGKNVYMKTYEPIDGLKVFEGKL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                    +E   +  K     ++ I ++ + +ARL VT
Sbjct: 120 AEFDGQTATIEMTIKTRKK----RVNIPYEKIANARLAVT 155


>gi|52785643|ref|YP_091472.1| hypothetical protein BLi01884 [Bacillus licheniformis ATCC 14580]
 gi|52348145|gb|AAU40779.1| YlxS [Bacillus licheniformis ATCC 14580]
          Length = 166

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 6/163 (3%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R      +   +S ++QP+++ +    V I  ++E  +  L++F++ DD  + + +C +
Sbjct: 6   RRKSMSNKVIDTVSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDD-GVDIEECAK 64

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+A+S  LD  + I+ +Y LEVSSPG +RP+ +++DF++  G  V  +        ++ 
Sbjct: 65  VSEALSEKLDEADPIKQNYFLEVSSPGAERPLKKEADFMKALGKNVYIKTYEPIEGNKEF 124

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G++         +              I I +D +  ARL V
Sbjct: 125 EGELSAFDGENVEVTV----MIKTRRKTINIPYDKVAKARLAV 163


>gi|16078722|ref|NP_389541.1| hypothetical protein BSU16590 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221309537|ref|ZP_03591384.1| hypothetical protein Bsubs1_09141 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313861|ref|ZP_03595666.1| hypothetical protein BsubsN3_09072 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318784|ref|ZP_03600078.1| hypothetical protein BsubsJ_09001 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323056|ref|ZP_03604350.1| hypothetical protein BsubsS_09112 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321315426|ref|YP_004207713.1| ribosome maturation protein RimP [Bacillus subtilis BSn5]
 gi|418459|sp|P32726|RIMP_BACSU RecName: Full=Ribosome maturation factor rimP; AltName: Full=P15A
 gi|49315|emb|CAA79230.1| ORF1 [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634031|emb|CAB13532.1| putative RNA-binding protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|291484214|dbj|BAI85289.1| hypothetical protein BSNT_02698 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320021700|gb|ADV96686.1| ribosome maturation protein RimP [Bacillus subtilis BSn5]
          Length = 156

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  + QP+++ +    V I  ++E  +  L++F++ DD  + + +C ++S+A
Sbjct: 1   MSKKVTDTVQEMAQPIVDSLQLELVDIEFVKEGQSWFLRVFIDSDD-GVDIEECAKVSEA 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +        +   G++
Sbjct: 60  LSEKLDEADPISQNYFLEVSSPGAERPLKKKADFEKSLGKNVYIKTYEPIDGVKVFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                    +E   +  K     +I I ++ + +ARL VT
Sbjct: 120 AEFDGQTVTVEITIKTRKK----RINIPYEKIANARLAVT 155


>gi|212639525|ref|YP_002316045.1| hypothetical protein Aflv_1699 [Anoxybacillus flavithermus WK1]
 gi|212561005|gb|ACJ34060.1| Uncharacterized conserved protein, YhbC family [Anoxybacillus
           flavithermus WK1]
          Length = 200

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  ++ P++  M    V I  ++  KN  L++F++     + +  C  +S+ +S
Sbjct: 46  KKVTHIVEELVTPIVTHMGLELVDIEYVKEGKNWFLRVFIDSP-TGIDIDQCGVVSEQLS 104

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I  +Y LEVSSPG +RP+ +  DF R  G  V  +       +++  G +  
Sbjct: 105 EKLDEIDPIPHNYFLEVSSPGAERPLKKARDFERAVGKNVYVKTYEPIDGQKEFEGLLTA 164

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + + +K    +     ++ + SARL V
Sbjct: 165 FDGQTVTVEVKVKTKKKTITI----PYEKVASARLAV 197


>gi|163782300|ref|ZP_02177298.1| hypothetical protein HG1285_05920 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882333|gb|EDP75839.1| hypothetical protein HG1285_05920 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 157

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 7/152 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           ++  I  +++P+I+ M +R   +    E+  +L++ +++  G +T+RDCEE+S+ IS +L
Sbjct: 8   ISRRIKELVEPLIKGMGYRLFDVEFKPERGWVLRVIIDKP-GGVTIRDCEEVSKKISGLL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+II   Y LE+SSPG+ R + +   +  + G +V   +      K++  G +    E
Sbjct: 67  DVEDIIPFSYMLEISSPGLTRELEKPEHYDFFKGRLVKVVLREPVSGKREATGYVESVRE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L + ++GE       + I F ++   RL
Sbjct: 127 GIITLREREKGEA------LHIPFSAIAKGRL 152


>gi|118602110|ref|YP_903325.1| hypothetical protein Rmag_0052 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166919103|sp|A1AV97|RIMP_RUTMC RecName: Full=Ribosome maturation factor rimP
 gi|118567049|gb|ABL01854.1| protein of unknown function DUF150 [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 154

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 7/156 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ +I+ VI++M +  V I  +   K+ +L++F++ D   + + DCE++S+ +S I
Sbjct: 4   VTDKITHLIELVIKDMCYELVGIEYVASGKHSILRVFIDTDKKGVGVNDCEKVSRQLSSI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
            DVE  I G Y LEVSSPGI+RP+  K  + R+ G  V   +V     ++   G I   +
Sbjct: 64  FDVEEPISGQYTLEVSSPGIERPLFHKEHYQRFLGANVKLRMVRPIDGRRNFFGVIGCVN 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 E +   E       + +  D +  A L+V 
Sbjct: 124 ------EADNTFELVGELDLVILDIDLIEKANLVVD 153


>gi|220934177|ref|YP_002513076.1| protein of unknown function DUF150 [Thioalkalivibrio sp. HL-EbGR7]
 gi|259645128|sp|B8GP00|RIMP_THISH RecName: Full=Ribosome maturation factor rimP
 gi|219995487|gb|ACL72089.1| protein of unknown function DUF150 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 154

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 10/150 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            + ++++P++  M ++   +     K+  LL++F++  +  +TL DC E+S+ +S ++DV
Sbjct: 2   QLKALLEPLVTRMGYQLWGMEFRVAKHSALLRLFIDS-EQGITLDDCTEVSRQVSALMDV 60

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I+  Y LEVSSPG+DRP+     + R+ G  V          ++   G I+   E  
Sbjct: 61  EDPIQVPYTLEVSSPGVDRPLFEAGQYARYVGEQVRVRTQWPIDGQRNFAGAIVSADEDS 120

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             L+ + R        ++ +  +++   RL
Sbjct: 121 VTLDVDGR--------EVRLPLEAIARGRL 142


>gi|67459265|ref|YP_246889.1| hypothetical protein RF_0873 [Rickettsia felis URRWXCal2]
 gi|75536303|sp|Q4UL49|RIMP_RICFE RecName: Full=Ribosome maturation factor rimP
 gi|67004798|gb|AAY61724.1| Uncharacterized protein [Rickettsia felis URRWXCal2]
          Length = 161

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 90/166 (54%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +G  +++ DC + S+ IS I
Sbjct: 4   IEQQITNVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNGEKISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+ G  V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEDAYSLEVASSGLERPLVKFENYNRFLGREVKIKLKELLNGKTRYQGKIIKAK 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|146329510|ref|YP_001208969.1| hypothetical protein DNO_0031 [Dichelobacter nodosus VCS1703A]
 gi|166919100|sp|A5EWZ1|RIMP_DICNV RecName: Full=Ribosome maturation factor rimP
 gi|146232980|gb|ABQ13958.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
          Length = 155

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++ +++P++E M F    +       N +L+I+V+  +G + + D   +++ ++
Sbjct: 1   MSQEQVVTELLRPIVESMGFIWWGLEYHYNSMNSILRIYVDTQEGGIGIDDIVTITEQLN 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           PILDVE  I  +Y LEVSSPG+DR +   +   ++ G  V C +      K+K  G +  
Sbjct: 61  PILDVEQPITTNYTLEVSSPGLDRILFTLAQCEQFIGATVHCRLRFPFEGKRKFQGIMTA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +             ++ + F  +  AR++ 
Sbjct: 121 VDHDKETISLTLAD----GAAEVHLPFTQIDKARIVP 153


>gi|307293341|ref|ZP_07573187.1| protein of unknown function DUF150 [Sphingobium chlorophenolicum
           L-1]
 gi|306881407|gb|EFN12623.1| protein of unknown function DUF150 [Sphingobium chlorophenolicum
           L-1]
          Length = 174

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 9/167 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAI 76
           M    +++++I+P ++ + F  V+I L    +   LQI  ER +   + + DC  +S+ +
Sbjct: 1   MADIAELTALIEPEVKALGFDLVRIKLFGSGDEYTLQIMAERPETKQLVIEDCATISRRL 60

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +LD  + IE  YRLEVSSPGIDRP+ R +DFL W GH        +   ++   G + 
Sbjct: 61  SDVLDEADPIEEAYRLEVSSPGIDRPLTRLTDFLEWTGHEAKIAATETVSGRKSFRGVLN 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
           G           K G        +AI F  +  A+LI+TD L+ AS+
Sbjct: 121 GIEGEDILFTDAKAG-------DVAIPFALVGDAKLILTDALIAASM 160


>gi|317129166|ref|YP_004095448.1| hypothetical protein Bcell_2460 [Bacillus cellulosilyticus DSM
           2522]
 gi|315474114|gb|ADU30717.1| protein of unknown function DUF150 [Bacillus cellulosilyticus DSM
           2522]
          Length = 154

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +  ++  +++P++++MS   V I   +  KN  L+++++R DG + L DC  +S+ +S
Sbjct: 1   MSIREEVEVLVEPILQQMSLELVDIEYKKEGKNWFLRVYIDR-DGGVDLDDCTAVSEQLS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I+  Y LEVSSPG +RP+  + D +R  G  +          ++   GK+M 
Sbjct: 60  EALDKHDPIDQMYYLEVSSPGAERPLKTEQDIVRAVGKYINVTTYAPIDGEKVFEGKLMH 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            ++    +E     +       + + +D +  ARL 
Sbjct: 120 FNDGILSME----TKVKTRVKTVELPYDKIAKARLA 151


>gi|296330874|ref|ZP_06873349.1| hypothetical protein BSU6633_07236 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674392|ref|YP_003866064.1| hypothetical protein BSUW23_08545 [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151879|gb|EFG92753.1| hypothetical protein BSU6633_07236 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412636|gb|ADM37755.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 156

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  + QP+++ +    V I  ++E  +  L++F++ DD  + + +C ++S+A
Sbjct: 1   MSKKVTDTVQEMAQPIVDSLQLELVDIEFVKEGQSWFLRVFIDSDD-GVDIEECAKVSEA 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +        +   G++
Sbjct: 60  LSEKLDEADPISQNYFLEVSSPGAERPLKKKADFEKSLGKNVYIKTYEPIEGVKVFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                    +E   +  K     +I I ++ + +ARL VT
Sbjct: 120 AEFDGQTVTVEITIKTRKK----RINIPYEKIANARLAVT 155


>gi|330877235|gb|EGH11384.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 152

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I      K+ +L+I++++ +G + + DC  +S+ IS +LD
Sbjct: 6   EQLQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDK-EGGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVRIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I T +
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDLIDKANIIPTFD 152


>gi|126175441|ref|YP_001051590.1| hypothetical protein Sbal_3241 [Shewanella baltica OS155]
 gi|153001791|ref|YP_001367472.1| hypothetical protein Shew185_3282 [Shewanella baltica OS185]
 gi|160876525|ref|YP_001555841.1| hypothetical protein Sbal195_3419 [Shewanella baltica OS195]
 gi|217972313|ref|YP_002357064.1| hypothetical protein Sbal223_1126 [Shewanella baltica OS223]
 gi|304410267|ref|ZP_07391886.1| protein of unknown function DUF150 [Shewanella baltica OS183]
 gi|307302022|ref|ZP_07581780.1| protein of unknown function DUF150 [Shewanella baltica BA175]
 gi|166990740|sp|A3D7K8|RIMP_SHEB5 RecName: Full=Ribosome maturation factor rimP
 gi|166990756|sp|A6WRH0|RIMP_SHEB8 RecName: Full=Ribosome maturation factor rimP
 gi|189040141|sp|A9KZX3|RIMP_SHEB9 RecName: Full=Ribosome maturation factor rimP
 gi|254799945|sp|B8E6N0|RIMP_SHEB2 RecName: Full=Ribosome maturation factor rimP
 gi|125998646|gb|ABN62721.1| protein of unknown function DUF150 [Shewanella baltica OS155]
 gi|151366409|gb|ABS09409.1| protein of unknown function DUF150 [Shewanella baltica OS185]
 gi|160862047|gb|ABX50581.1| protein of unknown function DUF150 [Shewanella baltica OS195]
 gi|217497448|gb|ACK45641.1| protein of unknown function DUF150 [Shewanella baltica OS223]
 gi|304351676|gb|EFM16075.1| protein of unknown function DUF150 [Shewanella baltica OS183]
 gi|306914060|gb|EFN44481.1| protein of unknown function DUF150 [Shewanella baltica BA175]
 gi|315268719|gb|ADT95572.1| protein of unknown function DUF150 [Shewanella baltica OS678]
          Length = 151

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +E + F+   I  +   K+  L++F++  +  + + DC   S+ +S +
Sbjct: 4   LEFRLAEMLKVPVEALGFQLWGIEYVQAGKHSTLRVFIDG-ENGINIEDCANASRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAGYVGEDVKLQLTMPVDGSRNLKGAITAVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L+   +        ++ ++ D++    LI
Sbjct: 123 GQMLSLKVNGK--------ELVVALDNIRKGNLI 148


>gi|152978791|ref|YP_001344420.1| hypothetical protein Asuc_1119 [Actinobacillus succinogenes 130Z]
 gi|171704316|sp|A6VND8|RIMP_ACTSZ RecName: Full=Ribosome maturation factor rimP
 gi|150840514|gb|ABR74485.1| protein of unknown function DUF150 [Actinobacillus succinogenes
           130Z]
          Length = 151

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ +G +++ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQGSVEDLGCELWGIECQRAGRFMTVRLFIDK-EGGVSVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   S + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPITDKYNLEVSSPGLDRPLFTLSQYERFIGEDITIHLRIPVSDRRKWQGKLEKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  + + +           F ++  A +I 
Sbjct: 123 NDTVTLTVDGQPQV--------FVFGNIQKANIIP 149


>gi|302381339|ref|YP_003817162.1| hypothetical protein Bresu_0224 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191967|gb|ADK99538.1| protein of unknown function DUF150 [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 232

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 10/180 (5%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERD-DGNMTLRDCEEL 72
           +        +I  +I PV + +    V++ L+       LQ+  ER  D ++ + +C  L
Sbjct: 36  LRAKTVEDREILELIDPVADSIGLSIVRVRLMGGTLRRRLQVMAERPSDNDIDVGECARL 95

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+A+S +LD  + I G Y LEVSSPGIDRP+ R  DF  + G     E       +++  
Sbjct: 96  SRAMSEVLDAADPIAGEYLLEVSSPGIDRPLTRLKDFDLFEGLEARLESDRMIEGRKRFK 155

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR--ASLNNYGSYA 190
           G + GT      ++ +        +    I FD L+ A+L++ D LL+  A++       
Sbjct: 156 GILAGTDGDNIAIDLDG------EDDTALIPFDWLVDAKLVMNDALLKRGAAIRAARGEP 209


>gi|87119793|ref|ZP_01075690.1| hypothetical protein MED121_07630 [Marinomonas sp. MED121]
 gi|86165269|gb|EAQ66537.1| hypothetical protein MED121_07630 [Marinomonas sp. MED121]
          Length = 153

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 10/152 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERD-DGNMTLRDCEELSQAISPILDV 82
           +   I+PV+E + +R   +    + K+ +L++F+E D +    + DC ++S+ +S ILDV
Sbjct: 8   LEGHIRPVVEGLGYRFWGLEYISQGKDSVLRVFIESDSENGTDIEDCAKVSRQVSSILDV 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I G Y LEVSSPG+DRP+   + F  + G +V+  + +    ++K  G++       
Sbjct: 68  EDPITGEYNLEVSSPGLDRPLFELAQFEEYIGAIVSLRLRVPFDGRRKFKGQLTAVEGED 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L  ++         +  +  D +  A ++ 
Sbjct: 128 VVLRVDQE--------EYLLPIDLIDKANVVP 151


>gi|56551453|ref|YP_162292.1| hypothetical protein ZMO0557 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761100|ref|ZP_04759189.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752934|ref|YP_003225827.1| hypothetical protein Za10_0696 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|81355359|sp|Q5NQ24|RIMP_ZYMMO RecName: Full=Ribosome maturation factor rimP
 gi|56543027|gb|AAV89181.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374719|gb|EER64180.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552297|gb|ACV75243.1| protein of unknown function DUF150 [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 184

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 10/161 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAISPILDV 82
           I+++++P ++ +    V+I++   K+   LQI  ER D   + L +CE LS+ +S I D 
Sbjct: 16  ITALVEPEVKALGLELVRIAMFGGKSDPTLQIMAERPDTRQIGLTECEALSRRLSEIFDE 75

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE-T 141
           ++ IE  YRLEVSSPGIDRP+ R+ D+  W G      +      +++  G+I+G  +  
Sbjct: 76  QDPIEDAYRLEVSSPGIDRPLTRRKDYQDWKGFSARIRLSAPLDGRKQFDGEIIGIDDAD 135

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
              L+  K G+K        + F ++  ++L++TD L+ A+
Sbjct: 136 NVILDCPKVGQKI-------LPFSAIERSKLLLTDALIAAT 169


>gi|30263820|ref|NP_846197.1| hypothetical protein BA_3954 [Bacillus anthracis str. Ames]
 gi|42782905|ref|NP_980152.1| hypothetical protein BCE_3855 [Bacillus cereus ATCC 10987]
 gi|47529244|ref|YP_020593.1| hypothetical protein GBAA_3954 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47569094|ref|ZP_00239783.1| YlxS-like protein [Bacillus cereus G9241]
 gi|49186667|ref|YP_029919.1| hypothetical protein BAS3668 [Bacillus anthracis str. Sterne]
 gi|49478391|ref|YP_037878.1| hypothetical protein BT9727_3558 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52141671|ref|YP_085158.1| hypothetical protein BCZK3576 [Bacillus cereus E33L]
 gi|165872607|ref|ZP_02217238.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167635806|ref|ZP_02394115.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167639838|ref|ZP_02398107.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170687819|ref|ZP_02879033.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170706785|ref|ZP_02897243.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177652089|ref|ZP_02934635.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190568460|ref|ZP_03021367.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|196036915|ref|ZP_03104299.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196042165|ref|ZP_03109448.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196044678|ref|ZP_03111913.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|206978439|ref|ZP_03239306.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217961237|ref|YP_002339805.1| hypothetical protein BCAH187_A3864 [Bacillus cereus AH187]
 gi|218904945|ref|YP_002452779.1| hypothetical protein BCAH820_3829 [Bacillus cereus AH820]
 gi|222097261|ref|YP_002531318.1| hypothetical protein BCQ_3601 [Bacillus cereus Q1]
 gi|225865796|ref|YP_002751174.1| hypothetical protein BCA_3913 [Bacillus cereus 03BB102]
 gi|227813275|ref|YP_002813284.1| hypothetical protein BAMEG_0677 [Bacillus anthracis str. CDC 684]
 gi|229603147|ref|YP_002868055.1| hypothetical protein BAA_3978 [Bacillus anthracis str. A0248]
 gi|254683476|ref|ZP_05147336.1| hypothetical protein BantC_06445 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254735855|ref|ZP_05193561.1| hypothetical protein BantWNA_11921 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254739619|ref|ZP_05197313.1| hypothetical protein BantKB_01112 [Bacillus anthracis str. Kruger
           B]
 gi|254756008|ref|ZP_05208039.1| hypothetical protein BantV_26379 [Bacillus anthracis str. Vollum]
 gi|254759331|ref|ZP_05211356.1| hypothetical protein BantA9_13571 [Bacillus anthracis str.
           Australia 94]
 gi|301055307|ref|YP_003793518.1| nus operon associated protein [Bacillus anthracis CI]
 gi|34222814|sp|Q81WL9|RIMP_BACAN RecName: Full=Ribosome maturation factor rimP
 gi|51316695|sp|Q732Q5|RIMP_BACC1 RecName: Full=Ribosome maturation factor rimP
 gi|81395111|sp|Q6HEZ8|RIMP_BACHK RecName: Full=Ribosome maturation factor rimP
 gi|81686585|sp|Q636K9|RIMP_BACCZ RecName: Full=Ribosome maturation factor rimP
 gi|226706060|sp|B7JJ95|RIMP_BACC0 RecName: Full=Ribosome maturation factor rimP
 gi|226706064|sp|B7HLF0|RIMP_BACC7 RecName: Full=Ribosome maturation factor rimP
 gi|254765081|sp|B9IVA5|RIMP_BACCQ RecName: Full=Ribosome maturation factor rimP
 gi|254803820|sp|C1EP39|RIMP_BACC3 RecName: Full=Ribosome maturation factor rimP
 gi|254803830|sp|C3P5L9|RIMP_BACAA RecName: Full=Ribosome maturation factor rimP
 gi|254806572|sp|C3L7B0|RIMP_BACAC RecName: Full=Ribosome maturation factor rimP
 gi|259585701|sp|A0RHI8|RIMP_BACAH RecName: Full=Ribosome maturation factor rimP
 gi|30258464|gb|AAP27683.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|42738832|gb|AAS42760.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
 gi|47504392|gb|AAT33068.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47554256|gb|EAL12618.1| YlxS-like protein [Bacillus cereus G9241]
 gi|49180594|gb|AAT55970.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|49329947|gb|AAT60593.1| conserved hypothetical protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51975140|gb|AAU16690.1| conserved hypothetical protein [Bacillus cereus E33L]
 gi|164711639|gb|EDR17185.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167512239|gb|EDR87616.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167528763|gb|EDR91521.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170128203|gb|EDS97072.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170668135|gb|EDT18884.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172082458|gb|EDT67523.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190560464|gb|EDV14442.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|195990470|gb|EDX54454.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196024713|gb|EDX63385.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|196027017|gb|EDX65641.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|206743354|gb|EDZ54794.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217067014|gb|ACJ81264.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|218536944|gb|ACK89342.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|221241319|gb|ACM14029.1| conserved hypothetical protein [Bacillus cereus Q1]
 gi|225790678|gb|ACO30895.1| conserved hypothetical protein [Bacillus cereus 03BB102]
 gi|227005285|gb|ACP15028.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
 gi|229267555|gb|ACQ49192.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
 gi|300377476|gb|ADK06380.1| protein associated with nus operon [Bacillus cereus biovar
           anthracis str. CI]
 gi|324327711|gb|ADY22971.1| ribosome maturation protein RimP [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 156

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
            D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  +S+ 
Sbjct: 1   MDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGAVSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK+
Sbjct: 60  LSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKM 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +    T   L    +  K     +I I  D + +ARL VT
Sbjct: 120 LSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|226946309|ref|YP_002801382.1| hypothetical protein Avin_42840 [Azotobacter vinelandii DJ]
 gi|259585700|sp|C1DFL1|RIMP_AZOVD RecName: Full=Ribosome maturation factor rimP
 gi|226721236|gb|ACO80407.1| Conserved hypothetical protein [Azotobacter vinelandii DJ]
          Length = 145

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + +++ PV+E + +    I    + ++ LL+++++  D  + + DCE++S+ IS +LDVE
Sbjct: 1   MQALLAPVVEALGYECWGIEFLSQGRHSLLRVYIDHAD-GILIDDCEKVSRQISGVLDVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG+DRP+     F+R  G  V   +      ++   G + G      
Sbjct: 60  DPISSEYTLEVSSPGMDRPLFTLEQFVRCAGEQVKIRLRSPFEGRRNFQGLLRG------ 113

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
              +++     +++ +  +  D +  A +I   +
Sbjct: 114 --VEDQDVVVLVDDHEYLLPIDLIDKANIIPRFD 145


>gi|288556946|ref|YP_003428881.1| hypothetical protein BpOF4_19750 [Bacillus pseudofirmus OF4]
 gi|288548106|gb|ADC51989.1| hypothetical protein BpOF4_19750 [Bacillus pseudofirmus OF4]
          Length = 156

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 6/158 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               +   ++ ++ P+++E++   V +   +E     L++F++  D  + L DC ++S+ 
Sbjct: 1   MSKKVTDIVAELVTPLLDELNLELVDVEFKKEGPNWFLRVFIDS-DTGVDLEDCGKVSEQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I   Y LEVSSPG +RP+ +  D  +  G  V          ++   G +
Sbjct: 60  LSEKLDEMDPIPQAYFLEVSSPGAERPLKKVKDLEKAVGKNVHVTTYEPVDGEKAFEGML 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    +E + +  K        I +D + +ARL 
Sbjct: 120 QSFDGEVLTIEVKIKTRKKS----YEIPYDKVANARLA 153


>gi|308050586|ref|YP_003914152.1| hypothetical protein Fbal_2876 [Ferrimonas balearica DSM 9799]
 gi|307632776|gb|ADN77078.1| protein of unknown function DUF150 [Ferrimonas balearica DSM 9799]
          Length = 151

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++   +E + +    I  +    +  L++F+E  +  +T+ DC  +S+ +  +
Sbjct: 4   MEQRLTEMLSEPVEALGYELWGIQYVRAGNHSTLRLFIEH-ENGITVDDCAAVSRQVGAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     + R+ G      + +    K+K  G+I+   
Sbjct: 63  LDVEDPITTEYNLEVSSPGLDRPLFTAEHYQRYMGSEAVVVLNMPMEGKRKWQGEIVAVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L   ++      +  +A+   ++  A +I
Sbjct: 123 GDMVTLRHNEK------DQVVALP--NVQKAHVI 148


>gi|154706898|ref|YP_001423971.1| hypothetical protein CBUD_0561 [Coxiella burnetii Dugway 5J108-111]
 gi|189040247|sp|A9KBL9|RIMP_COXBN RecName: Full=Ribosome maturation factor rimP
 gi|154356184|gb|ABS77646.1| hypothetical cytosolic protein [Coxiella burnetii Dugway 5J108-111]
          Length = 153

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V           +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATRILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+     +      +++  G I+ 
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGNKAKIRLREPREGQRQFRGMIVA 119

Query: 138 TSETG-FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                   L+ + +         + +    +  A LI   E
Sbjct: 120 VDNEEQVTLQLDNKI--------LKVPLGEIEKANLIADFE 152


>gi|170727896|ref|YP_001761922.1| hypothetical protein Swoo_3563 [Shewanella woodyi ATCC 51908]
 gi|226703865|sp|B1KRR2|RIMP_SHEWM RecName: Full=Ribosome maturation factor rimP
 gi|169813243|gb|ACA87827.1| protein of unknown function DUF150 [Shewanella woodyi ATCC 51908]
          Length = 151

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++  +E +      +  +   K+ +++++++  +  + + DC E+S+ +S +
Sbjct: 4   IENRLEEMLKSPVEALGHTLWGLEYIQAGKHSVVRVYIDN-EKGVFIEDCAEVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  +    V  ++ +     + L G + G  
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFNAEQYTAYIDETVKIQLTMPVAGSRNLKGTVTGVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQMLTLTVDG--------NELIIALDNIRKGNLI 148


>gi|218898969|ref|YP_002447380.1| hypothetical protein BCG9842_B1329 [Bacillus cereus G9842]
 gi|226695927|sp|B7IUH5|RIMP_BACC2 RecName: Full=Ribosome maturation factor rimP
 gi|218540973|gb|ACK93367.1| conserved hypothetical protein [Bacillus cereus G9842]
 gi|326941583|gb|AEA17479.1| hypothetical protein CT43_CH3814 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 156

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
            D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  +S+ 
Sbjct: 1   MDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGAVSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK+
Sbjct: 60  LSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +    T   L    +  K     +I I  D + +ARL VT
Sbjct: 120 LSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|163752375|ref|ZP_02159570.1| hypothetical protein KT99_00518 [Shewanella benthica KT99]
 gi|161327747|gb|EDP98934.1| hypothetical protein KT99_00518 [Shewanella benthica KT99]
          Length = 151

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++   +E +  R   +  +   K+ +L+++++  D  + + DC E S+ IS +
Sbjct: 4   IEKKLEEMLSSPVEALGHRLWGLEYIQAGKHSILRVYIDN-DNGIFIEDCAETSRQISAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   + LEVSSPG+DRP+     +  +    V  ++ +  G  + L G ++G  
Sbjct: 63  LDVEDPISTEFTLEVSSPGVDRPLFSAEQYGSYIDETVKIQLTMPVGGSRNLKGTVIGVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQTLTLSVDG--------NELIIALDNIRRGNLI 148


>gi|259586222|sp|C3K261|RIMP_PSEFS RecName: Full=Ribosome maturation factor rimP
          Length = 158

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++ +++ PV+  + +    I      ++ +L++++++ +G + + DC  +S+ IS +LD
Sbjct: 12  EELQALLAPVVVALGYECWGIEFSAQGRHSMLRVYIDK-EGGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F ++ G  V  ++      ++   G + G    
Sbjct: 71  VEDPISVEYTLEVSSPGMERPLFTIDQFAKFAGEQVKIKLRSPFEGRRNFQGLLRGV--- 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I + +
Sbjct: 128 -----EEQDVVVQVEDHEFLLPIDMIDKANIIPSFD 158


>gi|229019011|ref|ZP_04175853.1| hypothetical protein bcere0030_35250 [Bacillus cereus AH1273]
 gi|229025257|ref|ZP_04181677.1| hypothetical protein bcere0029_35590 [Bacillus cereus AH1272]
 gi|228736010|gb|EEL86585.1| hypothetical protein bcere0029_35590 [Bacillus cereus AH1272]
 gi|228742339|gb|EEL92497.1| hypothetical protein bcere0030_35250 [Bacillus cereus AH1273]
          Length = 156

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
            D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  +S+ 
Sbjct: 1   MDKKVTEVVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDS-EKGVDIEECGAVSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK+
Sbjct: 60  LSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +    T   L    +  K     +I I  D + +ARL VT
Sbjct: 120 LSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|28871626|ref|NP_794245.1| hypothetical protein PSPTO_4492 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213966649|ref|ZP_03394800.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301383159|ref|ZP_07231577.1| hypothetical protein PsyrptM_11007 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063406|ref|ZP_07254947.1| hypothetical protein PsyrptK_25769 [Pseudomonas syringae pv. tomato
           K40]
 gi|302133779|ref|ZP_07259769.1| hypothetical protein PsyrptN_20414 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|34222830|sp|Q87WQ3|RIMP_PSESM RecName: Full=Ribosome maturation factor rimP
 gi|28854878|gb|AAO57940.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213928499|gb|EEB62043.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 158

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I      K+ +L+I++++ +G + + DC  +S+ IS +LD
Sbjct: 12  EQLQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDK-EGGVLVDDCAIVSRQISGVLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 71  VEDPISTEYTLEVSSPGMERPLFTIEQFALYAGEQVRIKLRSPFEGRRNFQGLLRGV--- 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I T +
Sbjct: 128 -----EEQDVVVQVEDHEFLLPIDLIDKANIIPTFD 158


>gi|295687484|ref|YP_003591177.1| hypothetical protein Cseg_0027 [Caulobacter segnis ATCC 21756]
 gi|295429387|gb|ADG08559.1| protein of unknown function DUF150 [Caulobacter segnis ATCC 21756]
          Length = 196

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 12/181 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD------DGNMTLR 67
           + G      D+  ++ PV E + +  V++ L+       LQI  E         G+M + 
Sbjct: 1   MRGKTQEDRDLIEMLDPVAESLGYEIVRLRLMGGAEQRRLQIMAEHPLLEDGTGGDMNVE 60

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
           DC  LS+ IS ILD  + I G Y LEVSSPG+DRP+ R  DF  + G     E+   +  
Sbjct: 61  DCARLSRGISEILDAADPIAGEYTLEVSSPGVDRPLTRLKDFEDYAGLEARIELDRVAEG 120

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +++  G++ G  +    L  E       +++ +   F  ++ A+L++TD L+        
Sbjct: 121 RKRFKGELAGIEDDQVGLNIEGE-----DDVTVYFPFAWIIDAKLVMTDTLMDRGAKQRA 175

Query: 188 S 188
           +
Sbjct: 176 A 176


>gi|294500901|ref|YP_003564601.1| hypothetical protein BMQ_4155 [Bacillus megaterium QM B1551]
 gi|294350838|gb|ADE71167.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 156

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 6/158 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ P++EEM+   V+I  ++  K+  L++F++  D  + + DC  +S+ 
Sbjct: 1   MSKNVKQTVEEMVSPILEEMNLELVEIEYVKEGKDWFLRVFIDS-DNGVDIEDCGAVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +D  + I  +Y LEVSSPG +RP+ +  DF R  G  V  +        ++  G++
Sbjct: 60  LSEKMDAVDPIPHNYFLEVSSPGAERPLKKDKDFERAIGKHVYIKTYEPIEGAKEFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    L              + + +D +  ARL 
Sbjct: 120 QSFDGETVTLSI----RIKTRTKTVVLPYDKVAFARLA 153


>gi|117919477|ref|YP_868669.1| hypothetical protein Shewana3_1028 [Shewanella sp. ANA-3]
 gi|166919124|sp|A0KTZ4|RIMP_SHESA RecName: Full=Ribosome maturation factor rimP
 gi|117611809|gb|ABK47263.1| protein of unknown function DUF150 [Shewanella sp. ANA-3]
          Length = 151

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +E + F+   I  +   K+ +L++F++  +  + + DC  +S+ +S +
Sbjct: 4   LESRLADMLKVPVEALGFQLWGIEYVQAGKHSILRVFIDG-ENGINIEDCANVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGSRNLKGAITQVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L    +        ++ ++ D++    +I
Sbjct: 123 GQMLSLNVNGK--------ELVVALDNIRKGNII 148


>gi|253573563|ref|ZP_04850906.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251847091|gb|EES75096.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 153

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  ++ P +EE  F  V +  ++   N  L++FV++ +G + + DC  +S+
Sbjct: 1   MSTPKIKATVEQMVTPYLEENGFELVDVEYVKEGSNWFLRVFVDK-EGGIDIDDCGRISE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + I   Y LEVSSPG +RP+ +  D  +  G  V           ++  G+
Sbjct: 60  YLSEKLDENDPIPSAYFLEVSSPGAERPLKKAEDVSKAVGKDVFVTTYEPVDGLKEFEGR 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++        +E          + + AI ++ + SARL 
Sbjct: 120 LLSFDGDELVVEV--------GKKRHAIPYNKVASARLA 150


>gi|315634095|ref|ZP_07889384.1| YhbC family protein [Aggregatibacter segnis ATCC 33393]
 gi|315477345|gb|EFU68088.1| YhbC family protein [Aggregatibacter segnis ATCC 33393]
          Length = 151

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I      + L +++F+++ +G +T+ DC ++S+ +S +
Sbjct: 4   LEQKLQDLLQGSVEDLGCELWGIECQRVGRYLTVRLFIDK-EGGVTVDDCADVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  G++    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAQYTRYVGQEIVVHLRIPVADRRKWQGELAKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +K         +  ++F ++  A ++
Sbjct: 123 NDMITLIVDK--------QEQVLAFGNIQKANVV 148


>gi|326204062|ref|ZP_08193923.1| protein of unknown function DUF150 [Clostridium papyrosolvens DSM
           2782]
 gi|325985829|gb|EGD46664.1| protein of unknown function DUF150 [Clostridium papyrosolvens DSM
           2782]
          Length = 152

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 78/143 (54%), Gaps = 2/143 (1%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   ++ ++ PV+E +++  V +  ++   N  L++++++  G +++ DC+ +S+ 
Sbjct: 1   MKKNIQQTVTELVSPVVENLNYELVDVEYVKEGANWYLRVYIDKP-GGISIDDCQAVSEQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LD  + I+  Y LEVSSPG+DRP+  + DF ++ G +V  ++      K+   G++
Sbjct: 60  VSELLDKNDPIDQSYYLEVSSPGLDRPLKTEKDFTKYKGELVEVKVFQPIDGKKIFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNEL 158
           +G  +    + ++    +   + 
Sbjct: 120 VGLMDNFIVISQDGHDVQFERDK 142


>gi|157825876|ref|YP_001493596.1| hypothetical protein A1C_04075 [Rickettsia akari str. Hartford]
 gi|166979960|sp|A8GNW3|RIMP_RICAH RecName: Full=Ribosome maturation factor rimP
 gi|157799834|gb|ABV75088.1| hypothetical protein A1C_04075 [Rickettsia akari str. Hartford]
          Length = 166

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 90/164 (54%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V I      + +++I ++  +G  +++ DC + S  IS I
Sbjct: 4   IEQQITNVIEKSLTDMGFELVLIKFKGVNHKVVEILIDSLNGEKISVADCTKASSTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+ G  V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEDAYSLEVASSGLERPLVKFENYNRFLGREVKVKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +L+ E          ++ I +D + +A L++T+E+L+  L
Sbjct: 124 NNKVYLKCE--------AQEVLIDYDLIKNANLVLTEEVLKKLL 159


>gi|153207258|ref|ZP_01946022.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165918794|ref|ZP_02218880.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
 gi|212218227|ref|YP_002305014.1| hypothetical protein CbuK_0601 [Coxiella burnetii CbuK_Q154]
 gi|226707776|sp|B6J6A9|RIMP_COXB1 RecName: Full=Ribosome maturation factor rimP
 gi|120576746|gb|EAX33370.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165917518|gb|EDR36122.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
 gi|212012489|gb|ACJ19869.1| hypothetical cytosolic protein [Coxiella burnetii CbuK_Q154]
          Length = 153

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V           +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATTILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+     +      +++  G I+ 
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGNKAKIRLREPREGQRQFRGMIVA 119

Query: 138 TSETG-FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                   L+ + +         + +    +  A LI   E
Sbjct: 120 VDNEEQVTLQLDNKI--------LKVPLGEIEKANLIADFE 152


>gi|332188274|ref|ZP_08390001.1| hypothetical protein SUS17_3404 [Sphingomonas sp. S17]
 gi|332011670|gb|EGI53748.1| hypothetical protein SUS17_3404 [Sphingomonas sp. S17]
          Length = 192

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 14/171 (8%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAI 76
           M     ++ +I+P  + + F  V++ +     +  LQ+  ER D   + + DC +LS+ I
Sbjct: 1   MADIALLTQLIEPEAKALGFELVRVKMYGGTSDPTLQVMAERPDTRQLNIDDCADLSRRI 60

Query: 77  SPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           S ++D       + I+  YRLEVSSPGIDRP+ R  DF  W GH     +      +++ 
Sbjct: 61  SDVMDALEEQGRDPIDHAYRLEVSSPGIDRPLTRLKDFADWAGHEARITLAEKLNGRKQF 120

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
            G + G       +           E++  + F ++  A+L++TD L+ A+
Sbjct: 121 KGDLAGIEGDNVIIVD-------GEEVRHKLPFAAIEDAKLVMTDRLIAAT 164


>gi|78044682|ref|YP_360590.1| hypothetical protein CHY_1770 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|91208344|sp|Q3AB94|RIMP_CARHZ RecName: Full=Ribosome maturation factor rimP
 gi|77996797|gb|ABB15696.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 154

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 10/160 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQA 75
            + G+   +  + + V  E++   V +  ++E     L+I++++D+  + L DC+  S+ 
Sbjct: 3   RNKGIEQKVWPLAERVGGELNLEVVDVEFVKEAGRYFLRIYIDKDE-GVDLDDCQNFSER 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I  ILD E+ I   Y LEVSSPGI+RP+ + +DF ++ G     +   +   +++  GK+
Sbjct: 62  IGVILDEEDPIPQSYYLEVSSPGIERPLKKLADFEKFAGREAQIKTFAAIEGQKQFKGKL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +G  +    ++          + ++ I  + +  A L   
Sbjct: 122 LGVRDGQVVID--------AGKGEVQIPLEQIAKANLTFD 153


>gi|23099049|ref|NP_692515.1| hypothetical protein OB1594 [Oceanobacillus iheyensis HTE831]
 gi|34223115|sp|Q8EQU5|RIMP_OCEIH RecName: Full=Ribosome maturation factor rimP
 gi|22777277|dbj|BAC13550.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 156

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +      ++ P++EE +   V I  ++  KN  L++++++ +G + + +C E+S+ 
Sbjct: 1   MSSHVVSLTEELVTPILEEKNLELVDIEYVKEGKNWFLRVYIDK-EGGIDIMECGEVSEL 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I   Y LEVSSPG++RP+ +K DF    G  +  ++       ++  G +
Sbjct: 60  LSEKLDESDPITEAYFLEVSSPGVERPLKKKEDFDASIGKNIFVKLYEPIDGSKEYEGTL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                    +E     +    + Q+ I +  +  AR+ VT
Sbjct: 120 QSFDGETVTMEY----KVKTRKKQVEIPYSKIAKARIAVT 155


>gi|157828687|ref|YP_001494929.1| hypothetical protein A1G_04605 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933406|ref|YP_001650195.1| ribosome maturation protein RimP [Rickettsia rickettsii str. Iowa]
 gi|167012960|sp|A8GSP6|RIMP_RICRS RecName: Full=Ribosome maturation factor rimP
 gi|189040651|sp|B0BY63|RIMP_RICRO RecName: Full=Ribosome maturation factor rimP
 gi|157801168|gb|ABV76421.1| hypothetical protein A1G_04605 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908493|gb|ABY72789.1| hypothetical cytosolic protein [Rickettsia rickettsii str. Iowa]
          Length = 161

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +   +++ DC + S+ IS I
Sbjct: 4   IEQQITNVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNSEKVSVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|295706247|ref|YP_003599322.1| hypothetical protein BMD_4142 [Bacillus megaterium DSM 319]
 gi|294803906|gb|ADF40972.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 156

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 6/158 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ P++EEM+   V+I  ++  K+  L++F++  D  + + DC  +S+ 
Sbjct: 1   MSKNVKQTVEEMVSPILEEMNLELVEIEYVKEGKDWFLRVFIDS-DTGVDIEDCGAVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  +D  + I  +Y LEVSSPG +RP+ +  DF R  G  V  +        ++  G++
Sbjct: 60  LSEKMDAVDPIPHNYFLEVSSPGAERPLKKDKDFERAIGKHVYIKTYEPIEGAKEFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    L              + + +D +  ARL 
Sbjct: 120 QSFDGETVTLSI----RIKTRTKTVVLPYDKVAFARLA 153


>gi|34223001|sp|Q9AC22|RIMP_CAUCR RecName: Full=Ribosome maturation factor rimP
          Length = 178

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 12/168 (7%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD------DGNMTLRDCEELSQAISPIL 80
           ++ PV E + +  V++ L+   +   LQI  E         G+M + DC +LS+A+S +L
Sbjct: 1   MLDPVAESLGYEIVRLRLMGGTEQRRLQIMAEHPLLEDGSGGDMNVEDCAKLSRAVSEVL 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  + I G Y LEVSSPGIDRP+ R  DF  + G     E+   +  +++  G++ G  +
Sbjct: 61  DAADPIAGEYTLEVSSPGIDRPLTRLKDFDDYAGLEARIELDRVAEGRKRFKGELAGVED 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
               L  E       +++ +   F  ++ A+L++TD L+        +
Sbjct: 121 DQVGLNIEGE-----DDVTVYFPFAWVIDAKLVMTDALMERGAKQRAA 163


>gi|197106903|ref|YP_002132280.1| hypothetical protein PHZ_c3442 [Phenylobacterium zucineum HLK1]
 gi|259586178|sp|B4RC58|RIMP_PHEZH RecName: Full=Ribosome maturation factor rimP
 gi|196480323|gb|ACG79851.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 187

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 14/166 (8%)

Query: 31  PVIEEMSFRSVQISLLEE--KNLLLQIFVERD------DGNMTLRDCEELSQAISPILDV 82
           PV E + +  V++ L+        LQI  ER        G+M + DC +LS+A+S +LD 
Sbjct: 17  PVAEAVGYEIVRLRLMGGERNQRRLQIMAERPLLEDGTGGDMNVEDCAKLSRAVSEVLDA 76

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I G Y LEVSSPG+DRP+ R  DF  + G+    E+   +  +++  G + G     
Sbjct: 77  ADPISGEYTLEVSSPGVDRPLTRLKDFDTYEGYEARLELDRLAEGRKRFRGVLAGVEGDQ 136

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGS 188
             ++ E        E    + F  ++ A+L++TDEL++       +
Sbjct: 137 VAIDLEG------EEETALVPFAWIVEAKLVLTDELMKRGAQTRAA 176


>gi|163941554|ref|YP_001646438.1| hypothetical protein BcerKBAB4_3639 [Bacillus weihenstephanensis
           KBAB4]
 gi|226705817|sp|A9VT54|RIMP_BACWK RecName: Full=Ribosome maturation factor rimP
 gi|163863751|gb|ABY44810.1| protein of unknown function DUF150 [Bacillus weihenstephanensis
           KBAB4]
          Length = 156

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
            D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  +S+ 
Sbjct: 1   MDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDS-EKGVEIEECGAVSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK+
Sbjct: 60  LSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMFEGKL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +        L    +  K     +I I  D + +ARL VT
Sbjct: 120 LSYDGNTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|134299808|ref|YP_001113304.1| hypothetical protein Dred_1961 [Desulfotomaculum reducens MI-1]
 gi|259585752|sp|A4J5X6|RIMP_DESRM RecName: Full=Ribosome maturation factor rimP
 gi|134052508|gb|ABO50479.1| protein of unknown function DUF150 [Desulfotomaculum reducens MI-1]
          Length = 153

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 10/160 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++  + P++EE     V +  ++   N  L+IF+++  G + L DC+ +S+
Sbjct: 1   MAKSTVVEKVTEAVAPIVEEAKLELVDVEYVKEGGNWYLRIFIDKP-GGIELDDCQGVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I  +LD  + +   Y LEVSSPGI+RP+ +  DF ++NGH+V           +  IGK
Sbjct: 60  KIDTLLDEIDPVPQAYFLEVSSPGIERPLKKPQDFEKFNGHLVNITTFAPINGSKNFIGK 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++  +E G  LE + +        Q+ +    + +ARL V
Sbjct: 120 LLDYNEEGIHLEIKGK--------QVVLPHQQVATARLAV 151


>gi|113969368|ref|YP_733161.1| hypothetical protein Shewmr4_1024 [Shewanella sp. MR-4]
 gi|114046595|ref|YP_737145.1| hypothetical protein Shewmr7_1089 [Shewanella sp. MR-7]
 gi|123029878|sp|Q0HLG3|RIMP_SHESM RecName: Full=Ribosome maturation factor rimP
 gi|123030836|sp|Q0HXR7|RIMP_SHESR RecName: Full=Ribosome maturation factor rimP
 gi|113884052|gb|ABI38104.1| protein of unknown function DUF150 [Shewanella sp. MR-4]
 gi|113888037|gb|ABI42088.1| protein of unknown function DUF150 [Shewanella sp. MR-7]
          Length = 151

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++   +E + F+   I  +   K+ +L++F++  +  + + DC  +S+ +S +
Sbjct: 4   LESRLVDMLTVPVEALGFQLWGIEYVQAGKHSILRVFIDG-ENGINIEDCANVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGSRNLKGAITQVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L    +        ++ ++ D++    +I
Sbjct: 123 GQMLSLNVNGK--------ELVVALDNIRKGNII 148


>gi|157964684|ref|YP_001499508.1| hypothetical protein RMA_0855 [Rickettsia massiliae MTU5]
 gi|157844460|gb|ABV84961.1| hypothetical protein RMA_0855 [Rickettsia massiliae MTU5]
          Length = 164

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V + +      +++I ++  +G  +++ DC + S+ IS I
Sbjct: 7   IEQQITNVIEESLTDMGFELVLVKVKGVNPKVVEILIDSLNGERISVEDCTKASRTISAI 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+   
Sbjct: 67  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAE 126

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 127 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 164


>gi|52425501|ref|YP_088638.1| hypothetical protein MS1446 [Mannheimia succiniciproducens MBEL55E]
 gi|81386924|sp|Q65SK7|RIMP_MANSM RecName: Full=Ribosome maturation factor rimP
 gi|52307553|gb|AAU38053.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 151

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQQMLQGSVEDLGCELWGIECQRAGRFMTVRLYIDK-EGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  ++  + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLEQFQRYVGQEISVHLRIPMLDRRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  +          + + +  ++  A +I 
Sbjct: 123 GDMLTLIVDD--------QEQSFALSNIQKANVIP 149


>gi|294142062|ref|YP_003558040.1| hypothetical protein SVI_3291 [Shewanella violacea DSS12]
 gi|293328531|dbj|BAJ03262.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 151

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++  +E +  R   +  +   K+  L+++++  D  + + DC E S+ IS +
Sbjct: 4   IEKKLEEMLKSPVEALGHRLWGLEYIQAGKHSTLRVYIDN-DKGIFIEDCAETSRQISAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  +    V  ++ +     + L G ++G  
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFSSEQYASYIDETVKIQLTMPVAGSRNLKGTVIGVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +  +          ++ I+ D++    LI
Sbjct: 123 GQMLTISVDG--------NELIIALDNIRRGNLI 148


>gi|24372785|ref|NP_716827.1| hypothetical protein SO_1202 [Shewanella oneidensis MR-1]
 gi|34222878|sp|Q8EHL7|RIMP_SHEON RecName: Full=Ribosome maturation factor rimP
 gi|24346870|gb|AAN54272.1|AE015564_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 151

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +E + F+   I  +   K+ +L++F++  +  + + DC  +S+ +S +
Sbjct: 4   LESRLADMLKVPVEALGFQLWGIEYVQAGKHSILRVFIDG-ENGINIEDCANVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAAYVGEDVKLQLTMPVAGSRNLKGAITQVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +    +        ++ ++ D++    +I
Sbjct: 123 GQMLSVNVNGK--------ELVVALDNIRKGNII 148


>gi|304310505|ref|YP_003810103.1| Protein of unknown function DUF150 [gamma proteobacterium HdN1]
 gi|301796238|emb|CBL44446.1| Protein of unknown function DUF150 [gamma proteobacterium HdN1]
          Length = 154

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +     L   +  ++ P ++        +      K+ +L++F++  +  +T+ DCE +S
Sbjct: 1   MVVSSKLEN-LKVMLTPAVQAAGMELWGLEFFPQGKHSVLRLFIDS-ENGVTIDDCERVS 58

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             +S +LDVE+ + G Y LEVSSPG+DRP+       R+    +   + ++   K+  +G
Sbjct: 59  HQVSAVLDVEDPVSGEYHLEVSSPGMDRPLFGAEQLGRYIHCEIKVRLKMAVDGKRNFVG 118

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
           K++  SE     E +           + ++   +  A L+   E
Sbjct: 119 KLLAVSEDRCSFEVDG--------APLVVATSQIDKANLVPNFE 154


>gi|323495467|ref|ZP_08100542.1| ribosome maturation protein RimP [Vibrio sinaloensis DSM 21326]
 gi|323319464|gb|EGA72400.1| ribosome maturation protein RimP [Vibrio sinaloensis DSM 21326]
          Length = 140

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 10/147 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++  +    +  V +  +    +  L+IF++  +  + + DC E+S+ +S ++DVE+ I 
Sbjct: 1   LEAPVAASGYELVGLEFIRAGEHSTLRIFIDH-ENGINVEDCAEVSRQVSAVMDVEDPIT 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG++RP+ + + + ++ GH V+  + ++ G+++K  G I         +  
Sbjct: 60  VAYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIHSVDGETISVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E   E          +  ++  A LI 
Sbjct: 120 EGSEE--------EFALSNISKANLIP 138


>gi|157692342|ref|YP_001486804.1| hypothetical protein BPUM_1562 [Bacillus pumilus SAFR-032]
 gi|194014514|ref|ZP_03053131.1| protein YlxS (P15A) [Bacillus pumilus ATCC 7061]
 gi|166979791|sp|A8FDC7|RIMP_BACP2 RecName: Full=Ribosome maturation factor rimP
 gi|157681100|gb|ABV62244.1| hypothetical protein BPUM_1562 [Bacillus pumilus SAFR-032]
 gi|194013540|gb|EDW23105.1| protein YlxS (P15A) [Bacillus pumilus ATCC 7061]
          Length = 157

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 80/159 (50%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +S ++QP+++ +    V +  ++E  N  L++F++  D  + + +C ++S+A
Sbjct: 1   MSKKVVDVVSEMVQPILDGLQLELVDVEFVKEGQNWFLRVFIDS-DKGVDIEECAKVSEA 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +K+DF +  G  V  +       ++   G++
Sbjct: 60  LSEKLDEADPISQNYFLEVSSPGAERPLKKKADFEKALGKNVFMKTYEPIDGEKAFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +      +    + +I I ++ + +ARL V
Sbjct: 120 TSFDGEIATVTV----KIKTRKKEINIPYEKIANARLAV 154


>gi|254721997|ref|ZP_05183786.1| hypothetical protein BantA1_05952 [Bacillus anthracis str. A1055]
          Length = 156

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
            D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  +S+ 
Sbjct: 1   MDKKVTEVVEAFAQPIVEELNLEFVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGAVSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK+
Sbjct: 60  LSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKM 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +    T   L    +  K     +I I  D + +ARL VT
Sbjct: 120 LSYDGTTITLLLTIKTRKK----EIQIPMDKVANARLAVT 155


>gi|254516619|ref|ZP_05128678.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
 gi|219675042|gb|EED31409.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
          Length = 151

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 71/157 (45%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
                 + +++ P +E + F        ++ K+ +L++++E  +  + + DC  +S+ + 
Sbjct: 2   SAKENKLQTLLAPTVEALGFELWGTEYLIQGKHSVLRLYIES-ENGVQVSDCAAVSEQVG 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE  I G Y LEVSSPG+DR + R   +  + G  +   +      ++K  G + G
Sbjct: 61  AVLDVEEPISGEYLLEVSSPGVDRRLFRLEQYAAYVGEELELRLRSPFEGRRKFKGILRG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    L  +          +  + +  +  A+L +
Sbjct: 121 VEDGDVVLLVDD--------HEYLLPYGDVDRAQLTL 149


>gi|290473445|ref|YP_003466312.1| YhbC-like protein (fragment) [Xenorhabdus bovienii SS-2004]
 gi|289172745|emb|CBJ79516.1| YhbC-like protein (fragment) [Xenorhabdus bovienii SS-2004]
          Length = 140

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 74/147 (50%), Gaps = 9/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + F  V +  +  +   L+++++ ++  +T+ +C ++S  +S +LDVE+ I 
Sbjct: 1   MISAPVEALGFELVGLEFIRARVSTLRVYIDSEE-GITVDNCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+ +   + R+ G  V+  + ++  ++++  G I         +  
Sbjct: 60  VLYNLEISSPGLERPLFKAEHYQRFMGEEVSLVLRMAMQNRRRWQGIIKVVDGEMITVTV 119

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           + + E          +  ++  A L+ 
Sbjct: 120 DGKDEV--------FALSNIQKANLVP 138


>gi|15892741|ref|NP_360455.1| hypothetical protein RC0818 [Rickettsia conorii str. Malish 7]
 gi|34222951|sp|Q92HF3|RIMP_RICCN RecName: Full=Ribosome maturation factor rimP
 gi|15619918|gb|AAL03356.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 161

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +   +++ DC + S+ IS I
Sbjct: 4   IEQQIANVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNSEKISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|297180709|gb|ADI16918.1| uncharacterized protein conserved in bacteria [uncultured gamma
           proteobacterium HF0010_16J05]
          Length = 171

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 10/157 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              I  +I P +E +      I    + K   L I++ER D  + +  C  +S+ +  +L
Sbjct: 24  EKQIEELIAPTVESLGCEVWGIEYLSQGKYSKLLIYIERAD-GIDVDLCATVSKHVGDLL 82

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE +I   Y LEVSSPG+DR + ++  +L   G  V   +      ++++ G + G  +
Sbjct: 83  DVEELISSRYTLEVSSPGMDRVLFKEQHYLDHVGERVEIRLNYPFEGRKRISGILAGIED 142

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
               ++          E +  +  +++  ARL+ T +
Sbjct: 143 QTAIVQ--------EAEDEFLLPLENVQKARLVPTFD 171


>gi|86157526|ref|YP_464311.1| hypothetical protein Adeh_1099 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|123499926|sp|Q2IPZ0|RIMP_ANADE RecName: Full=Ribosome maturation factor rimP
 gi|85774037|gb|ABC80874.1| hypothetical protein Adeh_1099 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 171

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 17/170 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G+  +A  + S+++PV+E   +  V++          L++F+++  G + + DC+ +S+
Sbjct: 4   IGEQSIAEQVRSLLEPVLERDGYELVEVEWARLAGRWTLRVFIDKA-GGVGIDDCQAVSK 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD------- 127
            + PILDV + IE  Y LEVSSPG+DRP+ +  DF R+ G  V  +              
Sbjct: 63  TVEPILDVADFIEPAYDLEVSSPGLDRPLRKPRDFDRYAGQRVHVKAYGPVAGTAPGSPA 122

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
           ++   G + G  +    L+ +             +  D +  A L    E
Sbjct: 123 RKHWTGVLKGFRDGAVELDVDGALH--------RVPHDQIAKANLEYDVE 164


>gi|34581536|ref|ZP_00143016.1| hypothetical protein [Rickettsia sibirica 246]
 gi|229586875|ref|YP_002845376.1| hypothetical protein RAF_ORF0746 [Rickettsia africae ESF-5]
 gi|259586186|sp|C3PNX3|RIMP_RICAE RecName: Full=Ribosome maturation factor rimP
 gi|28262921|gb|EAA26425.1| unknown [Rickettsia sibirica 246]
 gi|228021925|gb|ACP53633.1| Unknown [Rickettsia africae ESF-5]
          Length = 161

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +        +++I ++  +   +++ DC + S+ IS I
Sbjct: 4   IEQQIANVIEESLTDMGFELVLVKFKGVNPKVVEILIDSLNSEKISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V   +      K +  GKI+   
Sbjct: 64  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKITLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|220927906|ref|YP_002504815.1| hypothetical protein Ccel_0453 [Clostridium cellulolyticum H10]
 gi|254803925|sp|B8I6E3|RIMP_CLOCE RecName: Full=Ribosome maturation factor rimP
 gi|219998234|gb|ACL74835.1| protein of unknown function DUF150 [Clostridium cellulolyticum H10]
          Length = 152

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 79/143 (55%), Gaps = 2/143 (1%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   ++ ++ PV+E +++  V I  ++   N  L++++++  G +++ DC+ +S+ 
Sbjct: 1   MKKNIQQTVTELVSPVVESLNYELVDIEYVKEGANWYLRVYIDKP-GGISIDDCQAVSEQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LD ++ I+  Y LEVSSPG+DRP+  + DF ++ G +V  ++      K+   G++
Sbjct: 60  VSDLLDKDDPIDQSYFLEVSSPGLDRPLKTEKDFAKYKGELVEVKVFQPIDGKKIFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNEL 158
           +G  +    + ++    +   + 
Sbjct: 120 VGLKDNIIVINQDGHNVQFERDE 142


>gi|259586220|sp|A8F225|RIMP_RICM5 RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 9/166 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V + +      +++I ++  +G  +++ DC + S+ IS I
Sbjct: 4   IEQQITNVIEESLTDMGFELVLVKVKGVNPKVVEILIDSLNGERISVEDCTKASRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEV+S G++RP+V+  ++ R+    V  ++      K +  GKI+   
Sbjct: 64  LDVEDLIEAAYSLEVASSGLERPLVKFENYNRFLEREVKIKLKELLNGKTRYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNN 185
               +L+ E        E ++ I +D + +A L++T+E+ +  L  
Sbjct: 124 NNKIYLKCE--------EQEVLIDYDLIKNANLVLTEEVFKKLLKQ 161


>gi|120597898|ref|YP_962472.1| hypothetical protein Sputw3181_1068 [Shewanella sp. W3-18-1]
 gi|146293930|ref|YP_001184354.1| hypothetical protein Sputcn32_2836 [Shewanella putrefaciens CN-32]
 gi|166977876|sp|A1RGX3|RIMP_SHESW RecName: Full=Ribosome maturation factor rimP
 gi|166988527|sp|A4Y9C2|RIMP_SHEPC RecName: Full=Ribosome maturation factor rimP
 gi|120557991|gb|ABM23918.1| protein of unknown function DUF150 [Shewanella sp. W3-18-1]
 gi|145565620|gb|ABP76555.1| protein of unknown function DUF150 [Shewanella putrefaciens CN-32]
 gi|319427307|gb|ADV55381.1| protein of unknown function DUF150 [Shewanella putrefaciens 200]
          Length = 151

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   ++ +++  +E + F+   I  +   K+ +L++F++  +  + + DC   S+ +S +
Sbjct: 4   LESRLAEMLKVPVEALGFQLWGIEYVQAGKHSILRVFIDG-ENGINIEDCANTSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G I    
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFTAEQYAAYVGEDVKVQLTMPVAGSRNLKGAITKVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L    +        ++ ++ D++    +I
Sbjct: 123 GQMLSLNVNGK--------ELVVALDNIRKGNVI 148


>gi|114562166|ref|YP_749679.1| hypothetical protein Sfri_0988 [Shewanella frigidimarina NCIMB 400]
 gi|114333459|gb|ABI70841.1| protein of unknown function DUF150 [Shewanella frigidimarina NCIMB
           400]
          Length = 165

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 71/154 (46%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++   +E + F+   I  +   ++ +L++F++  +  + + DC E S+ +S +
Sbjct: 18  IESKLVEMLTVPVEALGFKLWGIEYIQAGRHSILRVFIDH-ENGINIEDCAEASRQVSAV 76

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+     +  + G     ++ +     + L G I    
Sbjct: 77  MDVEDPISTEYTLEVSSPGVDRPLFTAEQYRAYIGEETKVQLTMPVAGSRNLKGVISSVD 136

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +  + +         + ++ D++    +I
Sbjct: 137 GQMLTITVDGKD--------LIVALDNIRKGNVI 162


>gi|259586211|sp|A8FYS2|RIMP_SHESH RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++  +E +      +  +   K+ +L+++++  +  + + DC E S+ +S +
Sbjct: 4   IENRLEEMLKSPVEALGHTLWGLEYVQAGKHSILRVYIDN-EKGIFIEDCAETSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+ +   +  +    V  ++ +     + L G I G  
Sbjct: 63  LDVEDPISTEYTLEVSSPGVDRPLFKAEQYAAYIDETVKIQLTMPVAGSRNLKGTITGIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQMLSLTVDG--------NELIIALDNIRKGNLI 148


>gi|51473735|ref|YP_067492.1| hypothetical protein RT0541 [Rickettsia typhi str. Wilmington]
 gi|81390042|sp|Q68WI2|RIMP_RICTY RecName: Full=Ribosome maturation factor rimP
 gi|51460047|gb|AAU04010.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
          Length = 161

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 85/164 (51%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPI 79
           +   I+++I+  + +M F  V +        +++I ++  +   +++ DC  +S+ IS I
Sbjct: 4   IEQQITNIIEESLTDMGFELVLVKFKGVNTKVVEILIDSLNGNKISIEDCTNVSRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS GI+R +V+  ++ R+ G  V  ++      K    GKI+   
Sbjct: 64  LDVEDLIEDAYSLEVSSSGIERKLVKFENYNRFLGREVKVKLKALLNGKTLYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +L           E ++ I F+ + +A L++T+E+ +  L
Sbjct: 124 NNKIYL--------KCAEQEVLIDFNLIKNANLVLTEEVFKKLL 159


>gi|52080266|ref|YP_079057.1| hypothetical protein BL01228 [Bacillus licheniformis ATCC 14580]
 gi|319645954|ref|ZP_08000184.1| hypothetical protein HMPREF1012_01218 [Bacillus sp. BT1B_CT2]
 gi|91208394|sp|Q65JI5|RIMP_BACLD RecName: Full=Ribosome maturation factor rimP
 gi|52003477|gb|AAU23419.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
 gi|317391704|gb|EFV72501.1| hypothetical protein HMPREF1012_01218 [Bacillus sp. BT1B_CT2]
          Length = 157

 Score =  124 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +S ++QP+++ +    V I  ++E  +  L++F++ DD  + + +C ++S+A
Sbjct: 1   MSNKVIDTVSEMVQPILDNLQLELVDIEFVKEGQSWFLRVFIDSDD-GVDIEECAKVSEA 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I+ +Y LEVSSPG +RP+ +++DF++  G  V  +        ++  G++
Sbjct: 60  LSEKLDEADPIKQNYFLEVSSPGAERPLKKEADFMKALGKNVYIKTYEPIEGNKEFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +              I I +D +  ARL V
Sbjct: 120 SAFDGENVEVTV----MIKTRRKTINIPYDKVAKARLAV 154


>gi|218288336|ref|ZP_03492635.1| protein of unknown function DUF150 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218241695|gb|EED08868.1| protein of unknown function DUF150 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 157

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 6/160 (3%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  ++ P++E  +   V I   +  KN  L++++++  G + + DC  +S+
Sbjct: 1   MTRDRVTEIVERLVLPIVEREAVELVDIEYTKEGKNWYLRVYIDKP-GGVDIDDCSRVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + I   Y LEVSSPG +RP+ R +DF R  G  V   +       +   G 
Sbjct: 60  QLSEELDRVDPIPNAYFLEVSSPGAERPLKRPADFERAVGRYVHVSLYEPLEGAKTHEGT 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++        LE ++R +     + +A+  + +  ARL +
Sbjct: 120 LVSYDGERLILEIKRRSKT----VTLAVPMEKIAHARLAL 155


>gi|330722349|gb|EGH00206.1| NusA [gamma proteobacterium IMCC2047]
          Length = 150

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 77/151 (50%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++ +++PV+E +      +  +++ +   L++++E  D  + + DCE +S+ +S + DVE
Sbjct: 7   LTELVRPVVEGLELEFWGLEMVVQGREKTLRVYIES-DKGIAVEDCEAVSRQLSSLFDVE 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G Y LEVSSPG+DRP+   + F ++ G  V  ++  +   ++   G + G  +   
Sbjct: 66  DPIAGEYTLEVSSPGLDRPLFEAAQFAQYVGETVKIKLRSAFEGRRNFRGALSGVEDDEV 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +  +          +  +  +S+  A ++ 
Sbjct: 126 IIVVDG--------HEYILPIESVEKANIVP 148


>gi|304414227|ref|ZP_07395595.1| hypothetical protein REG_1311 [Candidatus Regiella insecticola
           LSR1]
 gi|304283441|gb|EFL91837.1| hypothetical protein REG_1311 [Candidatus Regiella insecticola
           LSR1]
          Length = 154

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   ++ +I   ++ +  + V +  +  +   L+I+++  D  +T+  C ++S  +S +L
Sbjct: 8   LEQKLTEIISAPVKALGHKLVGVEFIPGRQSTLRIYIDNCD-GVTVDMCADVSYQVSAVL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE  I   Y LEVSSPG++R +    D+  + G  +   + ++  +++K  G I     
Sbjct: 67  DVEEPITCPYNLEVSSPGLERLLFTAEDYTDYLGERINLTLRIAMQNRRKWQGIIKAVDG 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
               +  + + E          +  ++  A 
Sbjct: 127 EMIIVTVDGKDEV--------FALSNIRKAN 149


>gi|30021906|ref|NP_833537.1| hypothetical protein BC3815 [Bacillus cereus ATCC 14579]
 gi|206972652|ref|ZP_03233593.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218235854|ref|YP_002368618.1| hypothetical protein BCB4264_A3915 [Bacillus cereus B4264]
 gi|296504312|ref|YP_003666012.1| hypothetical protein BMB171_C3482 [Bacillus thuringiensis BMB171]
 gi|34222809|sp|Q812X5|RIMP_BACCR RecName: Full=Ribosome maturation factor rimP
 gi|226706108|sp|B7HDU0|RIMP_BACC4 RecName: Full=Ribosome maturation factor rimP
 gi|29897462|gb|AAP10738.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
 gi|206732409|gb|EDZ49590.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218163811|gb|ACK63803.1| conserved hypothetical protein [Bacillus cereus B4264]
 gi|296325364|gb|ADH08292.1| hypothetical protein BMB171_C3482 [Bacillus thuringiensis BMB171]
          Length = 156

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 6/160 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
            D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  +S+ 
Sbjct: 1   MDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDS-EKGVDIEECGAVSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++   GK+
Sbjct: 60  LSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +    T   L    +  K     +I IS D + +ARL VT
Sbjct: 120 LSYDGTTITLLLTIKTRKK----EIQISMDKVANARLAVT 155


>gi|292572171|gb|ADE30086.1| hypothetical protein rpr22_CDS533 [Rickettsia prowazekii Rp22]
          Length = 161

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 87/164 (53%), Gaps = 9/164 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPI 79
           +A  I+++I+  + +M F  V +        ++++ ++  +   +++ DC  +S+ IS I
Sbjct: 4   IAQQITNIIEESLTDMGFELVLVKFKGVSPKVVEVLIDSLNGNKISIEDCTNVSRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE++IE  Y LEVSS GI+R +V+  ++ R+ G  V  ++      K    GKI+   
Sbjct: 64  LDVEDLIEEAYSLEVSSSGIERTLVKFENYNRFLGREVKIKLKELLNGKTLYQGKIIKAE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASL 183
               +L           E +++I F+ + +A L++T+E+ +  L
Sbjct: 124 NNKIYL--------KCAEQEVSIDFNLIRNANLVLTEEVFKKLL 159


>gi|197121570|ref|YP_002133521.1| hypothetical protein AnaeK_1159 [Anaeromyxobacter sp. K]
 gi|259585696|sp|B4UHF7|RIMP_ANASK RecName: Full=Ribosome maturation factor rimP
 gi|196171419|gb|ACG72392.1| protein of unknown function DUF150 [Anaeromyxobacter sp. K]
          Length = 171

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 17/170 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G+  +A  + S+++PV+E   +  V++          L++F+++  G + + DC+ +S+
Sbjct: 4   IGEQSIAEQVRSLLEPVLERDGYELVEVEWARLAGRWTLRVFIDKA-GGVGIDDCQAVSK 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD------- 127
            + PILDV ++IE  Y LEVSSPG+DRP+ +  DF R+ G  V  +              
Sbjct: 63  TVEPILDVADVIEPAYDLEVSSPGLDRPLRKPRDFDRYAGQRVHVKAYGPVAGTAPGAPA 122

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
           ++   G + G  +    L+ +             +  D +  A L    E
Sbjct: 123 RKHWTGVLKGFRDGAVELDVDGVLH--------RVPHDQIAKANLEYDVE 164


>gi|294624664|ref|ZP_06703334.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666763|ref|ZP_06731997.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292601020|gb|EFF45087.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603424|gb|EFF46841.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 196

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +                  ++   + I +D++  AR++  
Sbjct: 125 LRIDAEA------DAVVFAVDGKDVQIGYDNIDKARIVPD 158


>gi|89895267|ref|YP_518754.1| hypothetical protein DSY2521 [Desulfitobacterium hafniense Y51]
 gi|122482374|sp|Q24UI2|RIMP_DESHY RecName: Full=Ribosome maturation factor rimP
 gi|89334715|dbj|BAE84310.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 152

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   + ++I PVI E     V +  ++   +  L+I++++ +G + + DC  +S  
Sbjct: 1   MGESIMEQVEAIIAPVITEQGLELVDVEYVKEGAHWYLRIYIDK-EGGVDIDDCTNVSHL 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LD  + I   Y LEVSSPG++RP+ +  DF R+ G +V      +    ++  G +
Sbjct: 60  VSEVLDKHDPIAQAYMLEVSSPGLERPLKKDEDFERFTGKLVRVLTKEAYQGYKEFTGYL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +G  E    LE EK          +AI    +  A L
Sbjct: 120 VGLIEDDIVLEYEKEK--------MAIPRAIVDKANL 148


>gi|116624261|ref|YP_826417.1| hypothetical protein Acid_5179 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227423|gb|ABJ86132.1| protein of unknown function DUF150 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 174

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 9/159 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  V Q V +      V++ +    +  L++I +++ +  +T  DC+ +S  
Sbjct: 22  MQEAVTSKVEEVAQRVAQSEGLELVEVEVKGGGSARLVRISIDKPE-GVTHADCQTVSDK 80

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  IL+ E+ I GHY LEVSSPG++R +++  D+ R++G      +      ++   G +
Sbjct: 81  VGEILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQRFHGQKAKITVREEVDGRRTWEGTL 140

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G ++    LE               + FD +  A L  
Sbjct: 141 AGFADGVISLEV-------APGEIRRLPFDQVKKANLKF 172


>gi|29654725|ref|NP_820417.1| hypothetical cytosolic protein [Coxiella burnetii RSA 493]
 gi|161830413|ref|YP_001597278.1| hypothetical protein COXBURSA331_A1602 [Coxiella burnetii RSA 331]
 gi|34223106|sp|Q83BR9|RIMP_COXBU RecName: Full=Ribosome maturation factor rimP
 gi|189038961|sp|A9N8V8|RIMP_COXBR RecName: Full=Ribosome maturation factor rimP
 gi|29541993|gb|AAO90931.1| hypothetical cytosolic protein [Coxiella burnetii RSA 493]
 gi|161762280|gb|ABX77922.1| conserved hypothetical protein [Coxiella burnetii RSA 331]
          Length = 153

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 11/161 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V           +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATTILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+     +      +++  G ++ 
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGNKAKIRLREPREGQRQFRGMVVA 119

Query: 138 TSETG-FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                   L+ + +         + +S   +  A LI   E
Sbjct: 120 VDNEEQVTLQLDNKI--------LKVSLGEIEKANLIADFE 152


>gi|220916333|ref|YP_002491637.1| protein of unknown function DUF150 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|259585694|sp|B8JFY3|RIMP_ANAD2 RecName: Full=Ribosome maturation factor rimP
 gi|219954187|gb|ACL64571.1| protein of unknown function DUF150 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 171

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 17/170 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
            G+  +A  +  +++PV+E   +  V++          L++F+++  G + + DC+ +S+
Sbjct: 4   IGEQSIAEQVRRLLEPVLERDGYELVEVEWARLAGRWTLRVFIDKA-GGVGIDDCQAVSK 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD------- 127
            + PILDV ++IE  Y LEVSSPG+DRP+ +  DF R+ G  V  +              
Sbjct: 63  TVEPILDVADVIEPAYDLEVSSPGLDRPLRKPGDFDRYAGQRVHVKAYGPVAGTAPGAPA 122

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
           ++   G + G  +    L+ +             +  D +  A L    E
Sbjct: 123 RKHWTGVLKGFRDGAVELDVDGVLH--------RVPHDQIAKANLEYDVE 164


>gi|301063518|ref|ZP_07204050.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300442457|gb|EFK06690.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 157

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +I ++++PV++EM    V +     +   +L+I+ +R    +TL DC  +S+ I  +
Sbjct: 5   LLKEIEALVEPVLDEMGIELVDLEYVSGQGRQVLRIYADRP-TGITLDDCAMVSREIGHL 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV ++++  Y LEVSSPG++RP+ R+ DFLR  G  +  +       ++   G +    
Sbjct: 64  LDVSDLLKHQYVLEVSSPGLNRPLKREKDFLRVVGQRIKVQTTAPLKGRRNFSGVLQSVQ 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                ++ +           + I   S+  A L+  
Sbjct: 124 NGMLEIDLDG--------AVVQIPEQSIRKANLVFD 151


>gi|258511412|ref|YP_003184846.1| hypothetical protein Aaci_1431 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478138|gb|ACV58457.1| protein of unknown function DUF150 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 157

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 6/160 (3%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  ++ P++E  +   V I   +  KN  L++++++  G + + DC  +S+
Sbjct: 1   MTRDRVTEIVERLVLPIVEREAVELVDIEYTKEGKNWYLRVYIDKP-GGVDIDDCSRVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + I   Y LEVSSPG +RP+ R +DF R  G  V   +       +   G 
Sbjct: 60  QLSEELDRVDPIPNAYFLEVSSPGAERPLKRPADFERAVGRYVHVSLYEPLMGAKTHEGT 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++        LE ++R +     + +A+  + +  ARL +
Sbjct: 120 LVSYDGERLILEIKRRSKT----VTLAVPMEKIAHARLAL 155


>gi|212212196|ref|YP_002303132.1| hypothetical protein CbuG_0575 [Coxiella burnetii CbuG_Q212]
 gi|226707750|sp|B6IZ59|RIMP_COXB2 RecName: Full=Ribosome maturation factor rimP
 gi|212010606|gb|ACJ17987.1| hypothetical cytosolic protein [Coxiella burnetii CbuG_Q212]
          Length = 153

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 12/160 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M  A  +  +I P +E + F  V           +LQ+FV++  G + L +C ++S+ IS
Sbjct: 1   MSQARTLHRLIAPAVEALGFELVGCELFRRGATTILQVFVDKP-GGIGLDECAKVSRQIS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G Y LEVSSPG++RP+   + + R+ G+     +      +++  G I+ 
Sbjct: 60  AVLDVEDPIRGRYTLEVSSPGLERPLYTANHYRRFIGNKAKIRLREPREGQRQFRGMIVA 119

Query: 138 TSETG-FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
                   L+ + +         + +S   +  A LI TD
Sbjct: 120 VDNEEQVTLQLDNKI--------LKVSLGEIEKANLI-TD 150


>gi|285017806|ref|YP_003375517.1| hypothetical protein XALc_1014 [Xanthomonas albilineans GPE PC73]
 gi|283473024|emb|CBA15529.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 201

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 12/163 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEEL 72
              A +I++++ P ++ +    +    L       L+++++     + +  + + DCE +
Sbjct: 2   SDKANEIANLLGPTVDALGLELLGAEYLPASGGATLRLYIDVPLGEQPERMVNIDDCERV 61

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LDVE+ I G+Y LEVSSPG+DRP+     F R         + L    +++L 
Sbjct: 62  SREVSAQLDVEDPISGNYTLEVSSPGVDRPLFTAEQFARHRDESAKVVLKLPQQGRRRLQ 121

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           G+I+        +  E      ++  ++ + FD++  AR++  
Sbjct: 122 GRIVQVELDAGRIVFE------VDGAELTVDFDNIDKARILPD 158


>gi|310823423|ref|YP_003955781.1| hypothetical protein STAUR_6197 [Stigmatella aurantiaca DW4/3-1]
 gi|309396495|gb|ADO73954.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 161

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 10/160 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
              +     ++++P++       + +  + E+   +L++F+++  G + L +C ++S+A+
Sbjct: 7   KQTVEERAMTLLEPIVAGEGLELIDLEFVREREGWVLRLFIDKPGGRVGLDECSQVSRAV 66

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD--KQKLIGK 134
            P LDVE+++   Y LEVSSPG++RP+ + S + R  G  V  +     GD  ++   G 
Sbjct: 67  DPALDVEDLVPNEYNLEVSSPGVNRPLKKLSHYERVKGQKVKVKTFGPIGDPPRKNFSGT 126

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   +  G  +E E  G          I    +  A L  
Sbjct: 127 LTEVTAEGIAVEVEGAGA-------FRIPLKDIAKANLEF 159


>gi|56963997|ref|YP_175728.1| hypothetical protein ABC2232 [Bacillus clausii KSM-K16]
 gi|81365999|sp|Q5WFT8|RIMP_BACSK RecName: Full=Ribosome maturation factor rimP
 gi|56910240|dbj|BAD64767.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 156

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 75/157 (47%), Gaps = 6/157 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               ++  +  + +P++ E+    V++   +E     L++F++  D  + L DCE +S+ 
Sbjct: 1   MSKNVSRTVEQLAEPIVRELHLELVEVEYKKEGPNWYLRVFID-ADRGVNLDDCEAVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LD  + I+  Y LEVSSPG +RP+ +++D  +  G  V          ++   G +
Sbjct: 60  LSEVLDEVDPIKEAYFLEVSSPGAERPLKKEADVKKAVGKGVYVTTYEPIDGQKAFEGVL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +   +    +E    G+     +   + +  + +ARL
Sbjct: 120 VSFEDATLVIE----GKNKTRTVTYTVPYAKVANARL 152


>gi|298369369|ref|ZP_06980687.1| hypothetical protein HMPREF9016_01039 [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298283372|gb|EFI24859.1| hypothetical protein HMPREF9016_01039 [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 157

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +++   +  + +  V   L  + +  L+IF+++ +G +T+ DC  +S  +S +  VE
Sbjct: 16  DIQNILDKTLPGLGYELVDFELTAQGD--LRIFIDK-EGGITVEDCATVSNHLSRVFTVE 72

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 73  DI--DYKRLEISSPGLDRPLKKAADFVRFAGRQAKIKTRLPIDGQKNFIGRIENCKNGTV 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I FD++  ARL
Sbjct: 131 SISFDGKS--------VDIEFDNIDKARL 151


>gi|289548940|ref|YP_003473928.1| hypothetical protein Thal_1169 [Thermocrinis albus DSM 14484]
 gi|289182557|gb|ADC89801.1| protein of unknown function DUF150 [Thermocrinis albus DSM 14484]
          Length = 157

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 85/161 (52%), Gaps = 7/161 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
             +  +   +  ++ P++++M +R   +    E+  +L+I +++ +G +T+ DCEE+S+ 
Sbjct: 3   INEKAIVERVKELVTPLVKKMGYRLFDVEFKPERGWVLRIILDK-EGGITIGDCEEVSRK 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+II   Y LEVSSPG++R + +   F  + G +V   +      ++++ G I
Sbjct: 62  VSALLDVEDIIPFSYMLEVSSPGLNRELTKPEHFEFFEGRLVRVILRQPVEGRREIKGYI 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
            G +E    LE++       +   + +    +  A L + +
Sbjct: 122 RGVTEGVLKLEEKD------SRNILHVPLSHVARANLEMEE 156


>gi|219870468|ref|YP_002474843.1| hypothetical protein HAPS_0200 [Haemophilus parasuis SH0165]
 gi|219690672|gb|ACL31895.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
          Length = 135

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 10/140 (7%)

Query: 36  MSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
           M F  V +        L +++++++ +G +T+ DC ++S+ +S I DVE+ I   Y LEV
Sbjct: 1   MGFELVGVECQRAGRFLTVRLYIDK-EGGVTVDDCSDVSRQVSAIFDVEDPIADKYNLEV 59

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPG+DRP+   + + R+ G  +   + +   D++K  G+++        L+ +   +  
Sbjct: 60  SSPGLDRPLFTLAHYQRFVGREIVVHLRIPMLDRRKWQGELVSVEGDLITLKVDGNLQ-- 117

Query: 155 MNELQIAISFDSLLSARLIV 174
                 A +F ++  A LI 
Sbjct: 118 ------AFAFGNIQKANLIP 131


>gi|323701862|ref|ZP_08113532.1| protein of unknown function DUF150 [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533166|gb|EGB23035.1| protein of unknown function DUF150 [Desulfotomaculum nigrificans
           DSM 574]
          Length = 153

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 10/160 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +++ I+P++EE     V +  ++   N  L++F+++  G + L DC+ LS+
Sbjct: 1   MAKNSVVEKVTAAIEPIVEESKLELVNVEYVKEGGNWYLRVFIDKP-GGVDLDDCQMLSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +  +LD  + I   Y LEVSSPGI+RP+ +  DF R+ GH+V           +   GK
Sbjct: 60  KLDKLLDELDPIPQAYFLEVSSPGIERPLKKPEDFERFMGHLVNITTYTPIDGAKSFTGK 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G +E G  +E + +         + I  D + ++RL V
Sbjct: 120 LQGYTEAGIEIEVKGK--------PMLIPHDRVATSRLAV 151


>gi|304404289|ref|ZP_07385951.1| protein of unknown function DUF150 [Paenibacillus curdlanolyticus
           YK9]
 gi|304347267|gb|EFM13099.1| protein of unknown function DUF150 [Paenibacillus curdlanolyticus
           YK9]
          Length = 153

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P I+E  F  V +  ++   N  L+IFV++ +G + + +C  +S+ +S  
Sbjct: 6   IKSTVEEMVKPFIDENGFELVDVEYVKEGSNWFLRIFVDK-EGGIDIDECGRVSEYLSEQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I   Y LEVSSPG +RP+ +  D  +  G  V          +++  G +   +
Sbjct: 65  LDQKDPITDAYFLEVSSPGAERPLKKPEDVHKAVGKHVYMTTYEPVHGQKEFEGLLQSFN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +           +    I +  + SARL 
Sbjct: 125 GEVVSIR--------EGQRNFEIPYAKIASARLA 150


>gi|259585704|sp|B7GG79|RIMP_ANOFW RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  ++ P++  M    V I  ++  KN  L++F++     + +  C  +S+ +S
Sbjct: 2   KKVTHIVEELVTPIVTHMGLELVDIEYVKEGKNWFLRVFIDSP-TGIDIDQCGVVSEQLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I  +Y LEVSSPG +RP+ +  DF R  G  V  +       +++  G +  
Sbjct: 61  EKLDEIDPIPHNYFLEVSSPGAERPLKKARDFERAVGKNVYVKTYEPIDGQKEFEGLLTA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + + +K    +     ++ + SARL V
Sbjct: 121 FDGQTVTVEVKVKTKKKTITI----PYEKVASARLAV 153


>gi|184155205|ref|YP_001843545.1| hypothetical protein LAF_0729 [Lactobacillus fermentum IFO 3956]
 gi|227514705|ref|ZP_03944754.1| protein of hypothetical function DUF150 [Lactobacillus fermentum
           ATCC 14931]
 gi|260662295|ref|ZP_05863191.1| UPF0090 protein [Lactobacillus fermentum 28-3-CHN]
 gi|259585802|sp|B2GBN3|RIMP_LACF3 RecName: Full=Ribosome maturation factor rimP
 gi|183226549|dbj|BAG27065.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
 gi|227086909|gb|EEI22221.1| protein of hypothetical function DUF150 [Lactobacillus fermentum
           ATCC 14931]
 gi|260553678|gb|EEX26570.1| UPF0090 protein [Lactobacillus fermentum 28-3-CHN]
          Length = 159

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++++++P++ E +F   ++  ++E K+  L++++++ +G +TL DC  +S 
Sbjct: 1   MSNKTVVETVTALVEPILAEHNFELYEVEFVQEAKSWYLRVYIDK-EGGITLEDCALVSD 59

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            +S  LD    + I   Y LEVSSPG +RP+ ++ D+ R     V   +       +   
Sbjct: 60  QLSEQLDSADPDPIPQAYFLEVSSPGAERPLKKEVDYQRALDQYVNVSLYQQIDGHKVFE 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G +   S     +E   +      + Q+ I  D +  ARL 
Sbjct: 120 GYLRQLSPDELTIEYMDK----TRQKQVVIPRDKVAKARLA 156


>gi|315497223|ref|YP_004086027.1| hypothetical protein Astex_0175 [Asticcacaulis excentricus CB 48]
 gi|315415235|gb|ADU11876.1| protein of unknown function DUF150 [Asticcacaulis excentricus CB
           48]
          Length = 222

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 17/182 (9%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE----EKNLLLQIFVERD-DGNMTLRDC 69
           +         +     P+ E +    V++ L+          LQI  ER  DG++T+  C
Sbjct: 1   MRAKTTEDRKLIEAFDPIAEALGLDIVRVRLMGSNKPGGPRRLQIMAERKTDGDITVNQC 60

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
             LS+A+S  L+  + I G Y LEVSSPGIDRP+ R  DF  ++G     E+   +  ++
Sbjct: 61  ARLSRALSAWLEESDPIVGEYILEVSSPGIDRPLTRLKDFDTYSGLEARLELDRLAEGRK 120

Query: 130 KLIGKIMGTSETG-FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL-----RASL 183
           +  G + GT +     ++ E        E    I FD ++ A+L++ DELL     +A+L
Sbjct: 121 RFRGILTGTEDGEYVAIDLEG------EEDTAMIPFDWIIDAKLVLNDELLKIGAEKAAL 174

Query: 184 NN 185
             
Sbjct: 175 RR 176


>gi|157962880|ref|YP_001502914.1| hypothetical protein Spea_3062 [Shewanella pealeana ATCC 700345]
 gi|189039813|sp|A8H742|RIMP_SHEPA RecName: Full=Ribosome maturation factor rimP
 gi|157847880|gb|ABV88379.1| protein of unknown function DUF150 [Shewanella pealeana ATCC
           700345]
          Length = 151

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++  +E +  +   +  +   K+ +L+++++  +  + + DC E S+ +S +
Sbjct: 4   LERKLVEMLKAPVEALGHKLWGLEYIQAGKHSILRLYIDN-EKGIFIEDCAEASRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G + G  
Sbjct: 63  MDVEDPISTEYTLEVSSPGVDRPLFTAEQYQAYIGETVKVQLTMPVAGSRNLKGTVTGVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ ++ D++    LI
Sbjct: 123 GQMLNLSVDG--------NELIVALDNIRKGNLI 148


>gi|228474945|ref|ZP_04059673.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|314936574|ref|ZP_07843921.1| conserved hypothetical protein [Staphylococcus hominis subsp.
           hominis C80]
 gi|228270930|gb|EEK12318.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|313655193|gb|EFS18938.1| conserved hypothetical protein [Staphylococcus hominis subsp.
           hominis C80]
          Length = 155

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +  ++ ++I P++++++F  V +   +  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKITEEVETIITPILDDLNFELVDVEYAKEGKDRFLRISIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I   Y L+V+SPG +RP+ ++ D+       V   +       ++ +G +  
Sbjct: 61  EAMDQNDPIPEMYYLDVASPGAERPLKKEKDYQNAIEQPVFVSLYAPIEGDKEWLGILKS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             +    +E +++ +K      I I  + +  AR
Sbjct: 121 VDDDTITMEVKEKSKKK----TIEIPRNKIAKAR 150


>gi|306842730|ref|ZP_07475372.1| Protein of unknown function DUF150 [Brucella sp. BO2]
 gi|306287074|gb|EFM58579.1| Protein of unknown function DUF150 [Brucella sp. BO2]
          Length = 158

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/133 (42%), Positives = 82/133 (61%), Gaps = 2/133 (1%)

Query: 56  FVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
             ER DG MT+ DCE +S+ ++P+LDVE+ I G Y LE+SSPGIDRP+VRKSDF  W GH
Sbjct: 1   MAERPDGTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGH 60

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +   E  +    ++KL G+I+        +E ++      NE  + I FD +  ARL++T
Sbjct: 61  IAKVETSIVHEGRKKLRGRIVVGDADSVTIESDQISY--GNEPVVRIPFDLISDARLVLT 118

Query: 176 DELLRASLNNYGS 188
           D+L+R +L    +
Sbjct: 119 DDLIRDALRKDKA 131


>gi|158523047|ref|YP_001530917.1| hypothetical protein Dole_3037 [Desulfococcus oleovorans Hxd3]
 gi|158511873|gb|ABW68840.1| protein of unknown function DUF150 [Desulfococcus oleovorans Hxd3]
          Length = 181

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 12/171 (7%)

Query: 10  KYEPRIFGDMG-LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER--DDGNMT 65
              PR+ G    +   +  +++PV        V +   +E    +L++++     D  +T
Sbjct: 15  PATPRLMGGGNPVVAQMWKLVEPVCSAEGMELVFVEFNKESQGRVLRLYLASGVPDRGVT 74

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           L DC  +S+ ++ +LDV      +Y LEVSS G++RP+ ++ DF R+ G  V        
Sbjct: 75  LEDCAGISRQVNGLLDVYLPELDNYTLEVSSAGLERPLAKEIDFERFAGSRVKIRTAAPV 134

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
            D++   G ++G S+    L  + +           I +  +  A+L+  D
Sbjct: 135 SDRKNFTGILLGVSDGNVRLMVDDK--------TFVIPYGEITRAKLVNED 177


>gi|195953995|ref|YP_002122285.1| protein of unknown function DUF150 [Hydrogenobaculum sp. Y04AAS1]
 gi|226736378|sp|B4U6H1|RIMP_HYDS0 RecName: Full=Ribosome maturation factor rimP
 gi|195933607|gb|ACG58307.1| protein of unknown function DUF150 [Hydrogenobaculum sp. Y04AAS1]
          Length = 154

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
             +A  +  +++P+ + + FR   +    E   +L+I +++ +G +T+ DCEELS+ +S 
Sbjct: 5   KKIATTVKDLVKPISDNLGFRLFDVEFKPENGWVLRIIIDK-EGGVTIDDCEELSKRVSA 63

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE++I   Y LEVSSPG+ R +  K  +  + G      +     +KQ+  G I   
Sbjct: 64  LLDVEDVITSSYFLEVSSPGLTRELKEKWHYEFFKGKYARLYLKEKIDNKQEYAGYIDSV 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    L    +         + I FD +  ARL V
Sbjct: 124 EDDTLVLRLLDK--------TLKIPFDKIAKARLDV 151


>gi|219669698|ref|YP_002460133.1| hypothetical protein Dhaf_3680 [Desulfitobacterium hafniense DCB-2]
 gi|254800077|sp|B8FR10|RIMP_DESHD RecName: Full=Ribosome maturation factor rimP
 gi|219539958|gb|ACL21697.1| protein of unknown function DUF150 [Desulfitobacterium hafniense
           DCB-2]
          Length = 152

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   + ++I PVI E     V +  ++   +  L+I++++ +G + + DC  +S  
Sbjct: 1   MGESIMEQVEAIIAPVITEQGLELVDVEYVKEGAHWYLRIYIDK-EGGVDIDDCTNVSHL 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LD  + I   Y LEVSSPG++RP+ +  DF R+ G +V           ++  G +
Sbjct: 60  VSEVLDKHDPIAQAYMLEVSSPGLERPLKKDEDFERFTGKLVRVLTKEVYQGYKEFTGYL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +G  E    LE EK         ++AI    +  A L
Sbjct: 120 VGLIEDDIVLEYEKE--------RMAIPRAIVDKANL 148


>gi|78066109|ref|YP_368878.1| hypothetical protein Bcep18194_A4639 [Burkholderia sp. 383]
 gi|91208362|sp|Q39H32|RIMP_BURS3 RecName: Full=Ribosome maturation factor rimP
 gi|77966854|gb|ABB08234.1| protein of unknown function DUF150 [Burkholderia sp. 383]
          Length = 152

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++    ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MLCIYIDQP-AGISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E    K      +  +   +  ARLI   +
Sbjct: 117 GLEFEG---KKGEAAMLDFTLADIDKARLIPQVD 147


>gi|330963973|gb|EGH64233.1| ribosome maturation protein RimP [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 152

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++ PV+  + ++   I      K+ +L+I++++ +G + + DC  +S+ IS +LD
Sbjct: 6   EQLQGLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDK-EGGVLVDDCAIVSRQISGVLD 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ I   Y LEVSSPG++RP+     F  + G  V  ++      ++   G + G    
Sbjct: 65  VEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVRIKLRSPFEGRRNFQGLLRGV--- 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                +E+     + + +  +  D +  A +I T +
Sbjct: 122 -----EEQDVVVQVEDHEFLLPIDLIDKADIIPTFD 152


>gi|153004005|ref|YP_001378330.1| hypothetical protein Anae109_1138 [Anaeromyxobacter sp. Fw109-5]
 gi|259585695|sp|A7H9F0|RIMP_ANADF RecName: Full=Ribosome maturation factor rimP
 gi|152027578|gb|ABS25346.1| protein of unknown function DUF150 [Anaeromyxobacter sp. Fw109-5]
          Length = 171

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 20/179 (11%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +A     V++PV+    +  V++  L +     L++FV++  G + + DC+ +S+
Sbjct: 4   IAEESIAERTRRVLEPVLARDGYELVEVEWLRQGSRWTLRLFVDKP-GGVGIEDCQAVSR 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD------- 127
            + PILDVE+ IE  Y LEVSSPG+DRP+ + +DF R+ G     +              
Sbjct: 63  LVDPILDVEDFIEPAYDLEVSSPGLDRPLRKPADFDRYAGQRAHVKAYGPVAGTAPGSPA 122

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
           ++   G ++G  +    ++ +             +  D +  A L        A L   
Sbjct: 123 RKNWTGVLVGYRDGAVEIDVDGVVH--------RVPHDQIAKAHLEYD---FEADLRRK 170


>gi|114331634|ref|YP_747856.1| hypothetical protein Neut_1648 [Nitrosomonas eutropha C91]
 gi|114308648|gb|ABI59891.1| protein of unknown function DUF150 [Nitrosomonas eutropha C91]
          Length = 160

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 11/150 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++P I  M +  V I        LL++FV++ DG +TL DC  +S  +  +L VEN
Sbjct: 20  LFELLEPTIAGMGYELVDIEQSAPGR-LLRVFVDKKDGAITLADCVAVSNHLGQLLAVEN 78

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           I   + RLEVSSPG+DRP+ +++DF+R+ G  +   + ++   ++  +G +    +    
Sbjct: 79  I--DYNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQGQRNFVGTLTEVGDDALM 136

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           L  + +         +     +L  ARLI 
Sbjct: 137 LNVDGKL--------LQFELKNLEKARLIP 158


>gi|91792365|ref|YP_562016.1| hypothetical protein Sden_1005 [Shewanella denitrificans OS217]
 gi|123166362|sp|Q12QI3|RIMP_SHEDO RecName: Full=Ribosome maturation factor rimP
 gi|91714367|gb|ABE54293.1| protein of unknown function DUF150 [Shewanella denitrificans OS217]
          Length = 151

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++   +E + F    I  +   ++ ++++F++  +  + + DC E S+ +S +
Sbjct: 4   IESRLVEMLTVPVEALGFELWGIEFVHAGRHSIVRVFIDS-EKGIFIEDCAETSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + +  + G     ++ +     + L G I    
Sbjct: 63  LDVEDPITTEYTLEVSSPGVDRPLFTAAQYQAYIGEDAKVQLTMPVAGSRNLKGVISKVE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + +         + I+ D++    +I
Sbjct: 123 GQILTLNVDGKD--------LIIALDNIRKGNII 148


>gi|261400894|ref|ZP_05987019.1| hypothetical protein NEILACOT_04263 [Neisseria lactamica ATCC
           23970]
 gi|269209253|gb|EEZ75708.1| hypothetical protein NEILACOT_04263 [Neisseria lactamica ATCC
           23970]
          Length = 143

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TVSFDGK--------TVQIGLDNIDKARL 137


>gi|293390260|ref|ZP_06634594.1| protein YhbC [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950794|gb|EFE00913.1| protein YhbC [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 151

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 82/154 (53%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++  +   I      + L +++F+++ +G +T+ DC ++S+ +S +
Sbjct: 4   LEQKLQDLLQGSVEDLGCQLWGIECQRVGRYLTVRLFIDK-EGGVTVEDCADVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   +   R+ G  +   + +   D++K  G+++   
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAQCARYVGQEILVHLRIPVADRRKWQGELVKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +K+ +         ++FD++  A ++
Sbjct: 123 NDMITLIVDKQEQI--------LAFDNIQKASVV 148


>gi|268686951|ref|ZP_06153813.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268627235|gb|EEZ59635.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 149

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 8   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G      
Sbjct: 65  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCENDTV 122

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 123 TVSFDGK--------TVQIELGNIDKARL 143


>gi|56460078|ref|YP_155359.1| alpha-hemolysin-like HlyA family protein [Idiomarina loihiensis
           L2TR]
 gi|81362146|sp|Q5QTY6|RIMP_IDILO RecName: Full=Ribosome maturation factor rimP
 gi|56179088|gb|AAV81810.1| Alpha-hemolysin-like protein, hlyA family [Idiomarina loihiensis
           L2TR]
          Length = 152

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 75/159 (47%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            L   ++ +I+P +E + F    +  +   K   L+++++  +  +++ +C ++S  +S 
Sbjct: 3   NLQERLTDIIRPAVEALEFELWGVEFIRAGKFSTLRVYIDHPE-GISVDNCADVSYQVSS 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I   Y LEVSSPG++RP         +    VA E+V +  +K+K   +++  
Sbjct: 62  LLDVEDPINVEYNLEVSSPGMERPFFNAQQMQPYINETVAFELVAAQKNKRKFKAELIAV 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
                 L  +           + ++   + +A L+   +
Sbjct: 122 EGEELTLAVDND--------TLQVNMRDVKNAHLVPAFD 152


>gi|113868283|ref|YP_726772.1| hypothetical protein H16_A2308 [Ralstonia eutropha H16]
 gi|123032887|sp|Q0K9B7|RIMP_RALEH RecName: Full=Ribosome maturation factor rimP
 gi|113527059|emb|CAJ93404.1| conserved hypothetical protein [Ralstonia eutropha H16]
          Length = 162

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 74/151 (49%), Gaps = 4/151 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S+ ++ +  VE
Sbjct: 2   HLADLIETTLSGMGYELVELERAPAG--LLRVYIDQPETGIAIEDCEKVSRQLTHVFTVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ + +D++R+ G      + L    ++   G +   +    
Sbjct: 60  NV--DYERLEVSSPGLDRPLKKLADYVRFAGEEARVTLRLPVNGQKNFTGILREPTGAAG 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E       +  +   +  ARL+ 
Sbjct: 118 EEKIGLEFEGKDGPALLEFAVSDVDKARLVP 148


>gi|161870485|ref|YP_001599657.1| hypothetical protein NMCC_1541 [Neisseria meningitidis 053442]
 gi|259585798|sp|A9M1D3|RIMP_NEIM0 RecName: Full=Ribosome maturation factor rimP
 gi|161596038|gb|ABX73698.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 143

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TISFDGK--------TVQIGLDNIDKARL 137


>gi|73541718|ref|YP_296238.1| hypothetical protein Reut_A2030 [Ralstonia eutropha JMP134]
 gi|91208397|sp|Q46ZN9|RIMP_RALEJ RecName: Full=Ribosome maturation factor rimP
 gi|72119131|gb|AAZ61394.1| Protein of unknown function DUF150 [Ralstonia eutropha JMP134]
          Length = 162

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 75/151 (49%), Gaps = 4/151 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S+ ++ +L VE
Sbjct: 2   HLADLIETTLNGMGYELVELERAPAG--LLRVYIDQPETGIVIEDCEKVSRQLTHVLTVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ + +D++R+ G      + L    ++   G +   +    
Sbjct: 60  NV--DYERLEVSSPGLDRPLKKLADYVRFAGAEARVTLRLPVNGQKNFTGILREPTGEAG 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E       +  +   +  ARL+ 
Sbjct: 118 AEKVGLEFEGKDGPALLEFTVSDVDKARLVP 148


>gi|261392136|emb|CAX49636.1| conserved hypothetical protein [Neisseria meningitidis 8013]
          Length = 149

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 8   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 65  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 122

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 123 TVSFDGK--------TVQIELGNIDKARL 143


>gi|15677490|ref|NP_274646.1| hypothetical protein NMB1641 [Neisseria meningitidis MC58]
 gi|218768663|ref|YP_002343175.1| hypothetical protein NMA1895 [Neisseria meningitidis Z2491]
 gi|304386890|ref|ZP_07369152.1| protein of hypothetical function DUF150 [Neisseria meningitidis
           ATCC 13091]
 gi|54040272|sp|P67217|RIMP_NEIMB RecName: Full=Ribosome maturation factor rimP
 gi|54042665|sp|P67216|RIMP_NEIMA RecName: Full=Ribosome maturation factor rimP
 gi|7226891|gb|AAF41990.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|121052671|emb|CAM09012.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
 gi|304339049|gb|EFM05141.1| protein of hypothetical function DUF150 [Neisseria meningitidis
           ATCC 13091]
          Length = 149

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +  +T+ DC  +S  +S +  VE
Sbjct: 8   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-ESGITVEDCATVSNHLSRVFMVE 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 65  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 122

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 123 TVSFDGK--------TVQIELGNIDKARL 143


>gi|329120393|ref|ZP_08249060.1| protein of hypothetical function DUF150 [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327462348|gb|EGF08674.1| protein of hypothetical function DUF150 [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 192

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 15/159 (9%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
            IF +  +   I ++++  +  +    V   L  +    L++F+++ +G +T+ DC  +S
Sbjct: 43  FIFYESKMD--IQNLLEKTLPGLGCELVDHELTAQG--TLRVFIDK-EGGITIDDCAAVS 97

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             +S +  VE++   +  LE+SSPG+DRP+ + +DF R+ G     +  L    ++  IG
Sbjct: 98  NHLSRLFTVEDV--DYKNLEISSPGLDRPLKKAADFARFAGQEAKIKTRLPVDGQKNFIG 155

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +I         L  + +          A++ D++  ARL
Sbjct: 156 RIESCDGQTVVLSFDGK--------TAALALDNIDKARL 186


>gi|260914258|ref|ZP_05920731.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631891|gb|EEX50069.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 162

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 15  LEQKLHELLQSTVEDLGCELWGIECQRSGRFLTVRLYIDK-EGGVTVDDCADVSRQVSAI 73

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DR +   + + R+ G  +   + +   D++K  GK+    
Sbjct: 74  LDVEDPIADKYNLEVSSPGLDRALFTLAQYQRYIGQDIVVHLRIPVLDRRKWQGKLEKIE 133

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  +          +  + F ++  A +I 
Sbjct: 134 NDMLTLTVDG--------QEQVLVFGNIQKANIIP 160


>gi|242373556|ref|ZP_04819130.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           M23864:W1]
 gi|242348919|gb|EES40521.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           M23864:W1]
          Length = 178

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + S+IQP+++++ F  V+I  ++  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 25  SKVTEQVESIIQPILDDLKFELVEIEYVKEGKDRFLRISIDK-EGGVDLNDCTLASEKIS 83

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I   Y L+V+SPG +RP+ +  DF       V   +      +++ +G +  
Sbjct: 84  EAMDENDPIPEMYYLDVASPGAERPIKKDKDFHNAVTQPVFISLYAPIEGEKEWLGILQS 143

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             +    +E +++ +      QI I  + +  AR
Sbjct: 144 VDDDNIVMEVKEKSKTK----QIEIPRNKIAKAR 173


>gi|313667983|ref|YP_004048267.1| hypothetical protein NLA_6440 [Neisseria lactamica ST-640]
 gi|309378388|emb|CBX22989.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313005445|emb|CBN86880.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 143

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TVSFDGK--------TVQIGLDNIDKARL 137


>gi|296315230|ref|ZP_06865171.1| hypothetical protein NEIPOLOT_02434 [Neisseria polysaccharea ATCC
           43768]
 gi|296837868|gb|EFH21806.1| hypothetical protein NEIPOLOT_02434 [Neisseria polysaccharea ATCC
           43768]
          Length = 143

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TVSFDGK--------TVQIGLDNIDKARL 137


>gi|190575264|ref|YP_001973109.1| hypothetical protein Smlt3391 [Stenotrophomonas maltophilia K279a]
 gi|226703805|sp|B2FN92|RIMP_STRMK RecName: Full=Ribosome maturation factor rimP
 gi|190013186|emb|CAQ46819.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 196

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 12/163 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEEL 72
              A DI++++ P +  +    + +  L       L+++++     + +  + + DCE +
Sbjct: 2   SDKATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERIINVDDCERV 61

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L   ++++L 
Sbjct: 62  SREVSAQLDVEDPISGNYTLEVSSPGVDRPLFNLEQFARHQGESAKVTLKLPQDNRRRLQ 121

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           G+I  T E    +         +++ ++ +S D++  AR++  
Sbjct: 122 GRIEATDEAAGTITF------IVDKTEVVVSADNIDKARIMPD 158


>gi|21231946|ref|NP_637863.1| hypothetical protein XCC2513 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|188991043|ref|YP_001903053.1| hypothetical protein xccb100_1647 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|34223123|sp|Q8P7U5|RIMP_XANCP RecName: Full=Ribosome maturation factor rimP
 gi|226736393|sp|B0RRB2|RIMP_XANCB RecName: Full=Ribosome maturation factor rimP
 gi|21113675|gb|AAM41787.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|167732803|emb|CAP50997.1| YhbC family protein [Xanthomonas campestris pv. campestris]
          Length = 196

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + D  + + DCE +S+ 
Sbjct: 5   ATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +        +         ++   + I FD++  AR++  
Sbjct: 125 VRIDTEAAAVVF------SVDGKDVQIGFDNIDKARILPD 158


>gi|83748668|ref|ZP_00945685.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551]
 gi|207743365|ref|YP_002259757.1| hypothetical protein RSIPO_01539 [Ralstonia solanacearum IPO1609]
 gi|83724630|gb|EAP71791.1| Hypothetical cytosolic protein [Ralstonia solanacearum UW551]
 gi|206594762|emb|CAQ61689.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 162

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 4/151 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VE
Sbjct: 2   HLTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+   +DF R+ G  V   + L    ++   G +   +    
Sbjct: 60  NV--HYERLEVSSPGLDRPLRTLTDFTRFAGQEVKVTLRLPVDGQKNFTGIVQAPTGEPG 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   E       +  +   L  ARL+ 
Sbjct: 118 QERIGLEFEGKDGPALLEFTLSELDRARLVP 148


>gi|258591346|emb|CBE67645.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 153

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 84/153 (54%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   + ++  P+  E+    V +    E    +L++++++ D  +TL DC+ +S+ +S +
Sbjct: 5   VVERVRAIALPLFTELGLELVDVEFRREAGGWILRLYLDKPD-GVTLDDCQRVSEELSDL 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVENII   Y LEVSSPG++RP++R+SDFLR+ G       + +   +++ +G + G  
Sbjct: 64  LDVENIIHHPYTLEVSSPGLNRPLLRESDFLRFAGQRARVTTLQAVAGQRRFLGVLRGCE 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    LE+E           + I + ++  ARL
Sbjct: 124 DGQVLLERED-------GTTVLIPYAAISKARL 149


>gi|59801638|ref|YP_208350.1| hypothetical protein NGO1284 [Neisseria gonorrhoeae FA 1090]
 gi|254494078|ref|ZP_05107249.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268595171|ref|ZP_06129338.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268597520|ref|ZP_06131687.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268599675|ref|ZP_06133842.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268604050|ref|ZP_06138217.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268682509|ref|ZP_06149371.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684673|ref|ZP_06151535.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|293398727|ref|ZP_06642903.1| hypothetical protein NGNG_02048 [Neisseria gonorrhoeae F62]
 gi|75355764|sp|Q5F799|RIMP_NEIG1 RecName: Full=Ribosome maturation factor rimP
 gi|259585809|sp|B4RMZ1|RIMP_NEIG2 RecName: Full=Ribosome maturation factor rimP
 gi|59718533|gb|AAW89938.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|226513118|gb|EEH62463.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548560|gb|EEZ43978.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268551308|gb|EEZ46327.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583806|gb|EEZ48482.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268588181|gb|EEZ52857.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268622793|gb|EEZ55193.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268624957|gb|EEZ57357.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|291610867|gb|EFF39966.1| hypothetical protein NGNG_02048 [Neisseria gonorrhoeae F62]
          Length = 149

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 8   DIQTILEKTLPGLGYELVDFELAAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G      
Sbjct: 65  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCENDTV 122

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 123 TVSFDGK--------TVQIELGNIDKARL 143


>gi|289665187|ref|ZP_06486768.1| hypothetical protein XcampvN_19489 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667365|ref|ZP_06488440.1| hypothetical protein XcampmN_02313 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 196

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHAGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +                  ++  ++ I FD++  AR++  
Sbjct: 125 LRIDAEA------GAVVFAVDGKEVQIGFDNIDKARILPD 158


>gi|166712600|ref|ZP_02243807.1| hypothetical protein Xoryp_14385 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 196

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P ++ +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVDSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHAGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +                  ++   + I FD++  AR++  
Sbjct: 125 LRIDAEA------GAVVFAVDGKDVQIGFDNIDKARILPD 158


>gi|15602626|ref|NP_245698.1| hypothetical protein PM0761 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721059|gb|AAK02845.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 177

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 10/162 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEEL 72
           R      L   +  ++Q  +E++      I        L +++++++ +G +T+ DC ++
Sbjct: 23  REVILATLEQKLQELLQSSVEDLGCELWGIECQRAGRYLTVRLYIDK-EGGVTVEDCADV 81

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S ILDVE+ I   Y LEVSSPG+DR +     + R+ G  +   + +   D++K  
Sbjct: 82  SRQVSAILDVEDPIADKYNLEVSSPGLDRALFTLDQYQRYIGQEIVVHLRIPVLDRRKWQ 141

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           GK+         L  + + +  +        F ++  A +I 
Sbjct: 142 GKLEKIENDMLTLIVDGQEQILV--------FGNIQKANIIP 175


>gi|254252538|ref|ZP_04945856.1| hypothetical protein BDAG_01771 [Burkholderia dolosa AUO158]
 gi|124895147|gb|EAY69027.1| hypothetical protein BDAG_01771 [Burkholderia dolosa AUO158]
          Length = 152

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++    ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MLCIYIDQP-AGISLDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E    K      +  +   +  ARLI   +
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLIPQVD 147


>gi|34223026|sp|Q9CMQ4|RIMP_PASMU RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I        L +++++++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQKLQELLQSSVEDLGCELWGIECQRAGRYLTVRLYIDK-EGGVTVEDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DR +     + R+ G  +   + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRALFTLDQYQRYIGQEIVVHLRIPVLDRRKWQGKLEKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                L  + + +  +        F ++  A +I 
Sbjct: 123 NDMLTLIVDGQEQILV--------FGNIQKANIIP 149


>gi|308389760|gb|ADO32080.1| hypothetical protein NMBB_1873 [Neisseria meningitidis alpha710]
 gi|325134693|gb|EGC57332.1| hypothetical protein NMBM13399_0599 [Neisseria meningitidis M13399]
 gi|325198740|gb|ADY94196.1| conserved hypothetical protein [Neisseria meningitidis G2136]
          Length = 143

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TISFDGK--------TVQIELGNIDKARL 137


>gi|119470820|ref|ZP_01613431.1| hypothetical protein ATW7_05756 [Alteromonadales bacterium TW-7]
 gi|119446047|gb|EAW27326.1| hypothetical protein ATW7_05756 [Alteromonadales bacterium TW-7]
          Length = 151

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L  D+ +++ P +E + F    +  +   ++  L++++  +D  +++ +C + S+ IS
Sbjct: 2   TKLEQDLVTMLTPAVEMLGFELHGLEFVQAGRHSTLRVYIAHED-GISVDNCADASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I   Y LEVSSPG+DRP+ ++  + +  G  V     L    ++   G ++ 
Sbjct: 61  AILDVEDPITNEYDLEVSSPGVDRPLFKQDHYEQAQGEEVRVRTKLPQDGRRNFKGDLIA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            S     L  +         ++  I   ++  A LI
Sbjct: 121 VSSDMITLSSDG--------VEHLIMLSNIERANLI 148


>gi|311030089|ref|ZP_07708179.1| hypothetical protein Bm3-1_06021 [Bacillus sp. m3-13]
          Length = 156

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  +  P+++EM+   V I  ++   +  L++FV++ +G + + DC  +S+ 
Sbjct: 1   MSKNVTETVEELALPIVKEMNVELVDIEYVKEGSSWFLRVFVDK-EGGIDIEDCGTVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +K D  +  G  V  +        +   G +
Sbjct: 60  LSEKLDELDPIPHNYFLEVSSPGAERPLKKKEDIEKSVGKYVNIKTYEPIDGLKSFEGDL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        L    +  K     +++I +  +  ARL V
Sbjct: 120 LDFDGETIKLSMTIKTRKK----EVSIPYPKVAKARLAV 154


>gi|254805396|ref|YP_003083617.1| hypothetical protein NMO_1459 [Neisseria meningitidis alpha14]
 gi|254668938|emb|CBA07181.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
 gi|254669625|emb|CBA03670.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
 gi|325201700|gb|ADY97154.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
 gi|325208564|gb|ADZ04016.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
          Length = 143

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +  +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-ESGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TISFDGK--------TVQIELGNIDKARL 137


>gi|261364308|ref|ZP_05977191.1| hypothetical protein NEIMUCOT_04406 [Neisseria mucosa ATCC 25996]
 gi|288567561|gb|EFC89121.1| hypothetical protein NEIMUCOT_04406 [Neisseria mucosa ATCC 25996]
          Length = 143

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPVDGQKNFIGRIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L  + +           I  D++  ARL
Sbjct: 117 TLSFDGK--------TAQIGLDNIDKARL 137


>gi|325578297|ref|ZP_08148432.1| YhbC family protein [Haemophilus parainfluenzae ATCC 33392]
 gi|301156200|emb|CBW15671.1| conserved protein [Haemophilus parainfluenzae T3T1]
 gi|325160033|gb|EGC72162.1| YhbC family protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 151

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E++      I        + +++F+++ +G + + DC ++S+ +S I
Sbjct: 4   LEQKLQEMLQGAVEDLGCELWGIECQRAGRFMTVRLFIDK-EGGVGVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   D++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLEQFQRYVGEDIAVHLRIPVLDRRKWQGKLEKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  + + +  +        F ++  A +I
Sbjct: 123 NDMLTLIVDGQEQVLI--------FGNIQKANVI 148


>gi|206559871|ref|YP_002230635.1| hypothetical protein BCAL1505 [Burkholderia cenocepacia J2315]
 gi|226734182|sp|B4E7K9|RIMP_BURCJ RecName: Full=Ribosome maturation factor rimP
 gi|198035912|emb|CAR51804.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 152

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V++        +L I++++    ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVELERTGRG--MLCIYIDQP-AGISLDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E    K      +  +   +  ARLI   +
Sbjct: 117 GLEFEG---KKGEAAMLDFTLADIDKARLIPQVD 147


>gi|161524930|ref|YP_001579942.1| hypothetical protein Bmul_1757 [Burkholderia multivorans ATCC
           17616]
 gi|189350320|ref|YP_001945948.1| hypothetical protein BMULJ_01483 [Burkholderia multivorans ATCC
           17616]
 gi|221197755|ref|ZP_03570801.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
 gi|221204687|ref|ZP_03577704.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221214881|ref|ZP_03587849.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|226734876|sp|A9ABD7|RIMP_BURM1 RecName: Full=Ribosome maturation factor rimP
 gi|160342359|gb|ABX15445.1| protein of unknown function DUF150 [Burkholderia multivorans ATCC
           17616]
 gi|189334342|dbj|BAG43412.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
 gi|221165108|gb|EED97586.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|221175544|gb|EEE07974.1| conserved hypothetical protein [Burkholderia multivorans CGD2]
 gi|221181687|gb|EEE14088.1| conserved hypothetical protein [Burkholderia multivorans CGD2M]
          Length = 152

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L +++++    ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MLCVYIDQP-AGISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E    K      +  +   +  ARLI   +
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLIPQVD 147


>gi|240128558|ref|ZP_04741219.1| hypothetical protein NgonS_08003 [Neisseria gonorrhoeae SK-93-1035]
 gi|317164605|gb|ADV08146.1| hypothetical protein NGTW08_1178 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 143

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G      
Sbjct: 59  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|229013000|ref|ZP_04170165.1| hypothetical protein bmyco0001_34380 [Bacillus mycoides DSM 2048]
 gi|228748254|gb|EEL98114.1| hypothetical protein bmyco0001_34380 [Bacillus mycoides DSM 2048]
          Length = 173

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 11/169 (6%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEE 71
            R+F D  +   + +  QP++EE++   V +  ++E  +  L++F++  +  + + +C  
Sbjct: 5   RRLFMDKKVTEIVEAFAQPIVEELNLELVDVEYVQEGQDWFLRVFIDS-EKGVEIEECGA 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD E+ I   Y L+VSSPG +RP+ ++ DF +  G  VA +       ++  
Sbjct: 64  VSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYKPIDGEKMF 123

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
            GK++        L    +  K  ++      F  +   +L + D LLR
Sbjct: 124 EGKLLSYDGNTITLLLTIKTRKKKSK------FQWI---KLQMRDLLLR 163


>gi|194289951|ref|YP_002005858.1| hypothetical protein RALTA_A1852 [Cupriavidus taiwanensis LMG
           19424]
 gi|226696147|sp|B3R1E6|RIMP_CUPTR RecName: Full=Ribosome maturation factor rimP
 gi|193223786|emb|CAQ69793.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
          Length = 162

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 74/151 (49%), Gaps = 4/151 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S+ ++ +  VE
Sbjct: 2   HLADLIETTLSGMGYELVELERAPAG--LLRVYIDQPETGIAIEDCEKVSRQLTHVFTVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ + +DF+R+ G      + L    ++   G +   +    
Sbjct: 60  NV--DYERLEVSSPGLDRPLKKLADFVRFAGAEARVTLRLPVNGQKNFTGILREPTGAAG 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E       +  +   +  ARL+ 
Sbjct: 118 EEKIGLEFEGKDGPALLEFAVSDVDKARLVP 148


>gi|116872752|ref|YP_849533.1| hypothetical protein lwe1336 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123460990|sp|A0AIC2|RIMP_LISW6 RecName: Full=Ribosome maturation factor rimP
 gi|116741630|emb|CAK20754.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 155

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++++P+  E+    V I+  +E     L+IF+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLEQVEAIVEPITNELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++   G ++ 
Sbjct: 61  EKMDESDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              T   +    +  K   E    I  D +  ARL 
Sbjct: 121 YDGTTLVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|134295572|ref|YP_001119307.1| hypothetical protein Bcep1808_1464 [Burkholderia vietnamiensis G4]
 gi|166979856|sp|A4JDW9|RIMP_BURVG RecName: Full=Ribosome maturation factor rimP
 gi|134138729|gb|ABO54472.1| protein of unknown function DUF150 [Burkholderia vietnamiensis G4]
          Length = 152

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++    ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MLCIYIDQP-AGISLDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E+          +  +   +  ARLI   +
Sbjct: 117 GLEFERN---KGEAAMLDFTLADIDKARLIPQVD 147


>gi|107022572|ref|YP_620899.1| hypothetical protein Bcen_1018 [Burkholderia cenocepacia AU 1054]
 gi|116689520|ref|YP_835143.1| hypothetical protein Bcen2424_1498 [Burkholderia cenocepacia
           HI2424]
 gi|170732824|ref|YP_001764771.1| hypothetical protein Bcenmc03_1474 [Burkholderia cenocepacia MC0-3]
 gi|254245587|ref|ZP_04938908.1| hypothetical protein BCPG_00296 [Burkholderia cenocepacia PC184]
 gi|122978973|sp|Q1BWS9|RIMP_BURCA RecName: Full=Ribosome maturation factor rimP
 gi|166979874|sp|A0K6X3|RIMP_BURCH RecName: Full=Ribosome maturation factor rimP
 gi|226734185|sp|B1K0L8|RIMP_BURCC RecName: Full=Ribosome maturation factor rimP
 gi|105892761|gb|ABF75926.1| protein of unknown function DUF150 [Burkholderia cenocepacia AU
           1054]
 gi|116647609|gb|ABK08250.1| protein of unknown function DUF150 [Burkholderia cenocepacia
           HI2424]
 gi|124870363|gb|EAY62079.1| hypothetical protein BCPG_00296 [Burkholderia cenocepacia PC184]
 gi|169816066|gb|ACA90649.1| protein of unknown function DUF150 [Burkholderia cenocepacia MC0-3]
          Length = 152

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V++        +L I++++    ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVELERTGRG--MLCIYIDQP-AGISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E    K      +  +   +  ARLI   +
Sbjct: 117 GLEFEG---KKGEAAMLDFTLADIDKARLIPQVD 147


>gi|313633404|gb|EFS00240.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
          Length = 155

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ +E+    V I+  +E     L+IF+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLDQVEAIVAPITDELHLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF+      V          ++   G +  
Sbjct: 61  EKMDESDPITQNYFLEVSSPGAERPLKKEQDFVNAVSKYVHVTSYEPIDGRKMWEGTLES 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +    +  K   E    I  D +  ARL 
Sbjct: 121 FDGETLVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|330816692|ref|YP_004360397.1| hypothetical protein bgla_1g17960 [Burkholderia gladioli BSR3]
 gi|327369085|gb|AEA60441.1| hypothetical protein bgla_1g17960 [Burkholderia gladioli BSR3]
          Length = 153

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L +++++    +++ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MLCVYIDQP-AGISIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G+ ++  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGNEISVTLKKPLEGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E    K      +  +   +  ARLI   +
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLIPQVD 147


>gi|329724310|gb|EGG60822.1| hypothetical protein SEVCU144_1771 [Staphylococcus epidermidis
           VCU144]
          Length = 155

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++IQPV+ +++F  V I  ++  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQVEALIQPVLNDLNFELVDIEYVKEGKDHFLRISIDK-EGGVDLNDCTIASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++D  + I   Y L+V+SPG +RP+ +  DF       +   +       ++ +G +  
Sbjct: 61  EVMDKNDPIPEMYYLDVASPGAERPIKKDKDFYNAINQPIFVSLYAPIEGDKEWLGVLKS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            ++    +E +++ +      +I I  + +  AR
Sbjct: 121 VNDESINMEVKEKAKTK----EIEIPRNKIAKAR 150


>gi|325526250|gb|EGD03869.1| ribosome maturation protein RimP [Burkholderia sp. TJI49]
          Length = 152

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 8/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L +++++    ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MLCVYIDQP-AGISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE E    K      +  +   +  ARLI 
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLIP 144


>gi|51892656|ref|YP_075347.1| hypothetical protein STH1518 [Symbiobacterium thermophilum IAM
           14863]
 gi|81388945|sp|Q67P90|RIMP_SYMTH RecName: Full=Ribosome maturation factor rimP
 gi|51856345|dbj|BAD40503.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 160

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   +  +  P    +    V + L++E     L++++++ +G +   DCE LS+ + 
Sbjct: 6   KRLEELVEELAAPHAAALGLELVGVELVKEGAYRYLRVYIDK-EGGVGFDDCEALSRVVD 64

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD       +   EVSSPG+DRP+ R++DF R+ GH V          ++  +G++ G
Sbjct: 65  AQLDEILPNPPYDFFEVSSPGLDRPLKREADFARYVGHKVVVTTYAPVDGQKSFVGELQG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    L      E       IA+    + SARL V
Sbjct: 125 LVDGRVTLTLT---EGKGRGQTIALDRKQVASARLYV 158


>gi|310641592|ref|YP_003946350.1| ribosome maturation factor rimp [Paenibacillus polymyxa SC2]
 gi|309246542|gb|ADO56109.1| Ribosome maturation factor rimP [Paenibacillus polymyxa SC2]
          Length = 153

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  + QP ++E  F  V +  ++   N  L++FV++ DG + L DC  +S+
Sbjct: 1   MSTPKIKSVVEEMAQPYLDEHGFELVDVEYVKEGSNWFLRVFVDK-DGGIDLDDCSMISE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +   LD  + +   Y LEVSSPG +RP+ +  D  +  G  V           ++  G+
Sbjct: 60  YLGQKLDENDPVSTAYFLEVSSPGAERPLKKAEDVTKAVGKNVFVTTYEPINGLKEFEGR 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++   +    ++          + +  I +D +  ARL 
Sbjct: 120 LLSFEDGELTVQ--------SGQKKHTIPYDKVAGARLA 150


>gi|259586210|sp|B8CKH1|RIMP_SHEPW RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++  +E +      +  +   K+ +L+++++  +  + + DC E S+ +S +
Sbjct: 4   LERKLVEMLKAPVEALGHELWGLEYIQAGKHSILRLYIDN-EKGIFIEDCAETSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G ++G  
Sbjct: 63  MDVEDPISTEYTLEVSSPGVDRPLFTAEQYQLYIGETVKVQVTMPVAGSRNLKGTVIGIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ I+ D++    LI
Sbjct: 123 GQMLTLSVDG--------NELIIALDNIRKGNLI 148


>gi|27467859|ref|NP_764496.1| hypothetical protein SE0941 [Staphylococcus epidermidis ATCC 12228]
 gi|57866747|ref|YP_188414.1| hypothetical protein SERP0832 [Staphylococcus epidermidis RP62A]
 gi|251810696|ref|ZP_04825169.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876303|ref|ZP_06285170.1| conserved hypothetical protein [Staphylococcus epidermidis SK135]
 gi|293366771|ref|ZP_06613447.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|34222847|sp|Q8CST6|RIMP_STAES RecName: Full=Ribosome maturation factor rimP
 gi|81674897|sp|Q5HPS6|RIMP_STAEQ RecName: Full=Ribosome maturation factor rimP
 gi|27315404|gb|AAO04538.1|AE016747_35 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57637405|gb|AAW54193.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|251805856|gb|EES58513.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295328|gb|EFA87855.1| conserved hypothetical protein [Staphylococcus epidermidis SK135]
 gi|291319072|gb|EFE59442.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329736648|gb|EGG72914.1| hypothetical protein SEVCU045_1081 [Staphylococcus epidermidis
           VCU045]
          Length = 155

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 78/154 (50%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++IQPV+ +++F  V I  ++  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQVEALIQPVLNDLNFELVDIEYVKEGKDHFLRISIDK-EGGVDLNDCTIASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++D  + I   Y L+V+SPG +RP+ ++ DF       +   +       ++ +G +  
Sbjct: 61  EVMDENDPIPEMYYLDVASPGAERPIKKEKDFYNAINQPIFVSLYAPIEGDKEWLGVLKS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            ++    +E +++ +      +I I  + +  AR
Sbjct: 121 VNDESINMEVKEKAKTK----EIEIPRNKIAKAR 150


>gi|259586206|sp|Q01W33|RIMP_SOLUE RecName: Full=Ribosome maturation factor rimP
          Length = 153

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 9/159 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  V Q V +      V++ +    +  L++I +++ +  +T  DC+ +S  
Sbjct: 1   MQEAVTSKVEEVAQRVAQSEGLELVEVEVKGGGSARLVRISIDKPE-GVTHADCQTVSDK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  IL+ E+ I GHY LEVSSPG++R +++  D+ R++G      +      ++   G +
Sbjct: 60  VGEILEAEDAIPGHYTLEVSSPGVERKLLKPQDYQRFHGQKAKITVREEVDGRRTWEGTL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G ++    LE               + FD +  A L  
Sbjct: 120 AGFADGVISLEV-------APGEIRRLPFDQVKKANLKF 151


>gi|261379109|ref|ZP_05983682.1| hypothetical protein NEICINOT_05033 [Neisseria cinerea ATCC 14685]
 gi|269144429|gb|EEZ70847.1| hypothetical protein NEICINOT_05033 [Neisseria cinerea ATCC 14685]
          Length = 143

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLSRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQQAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I  D++  ARL
Sbjct: 117 TVSFDGK--------TVQIEIDNIDKARL 137


>gi|78048395|ref|YP_364570.1| hypothetical protein XCV2839 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325924689|ref|ZP_08186127.1| hypothetical protein XPE_0035 [Xanthomonas perforans 91-118]
 gi|91208411|sp|Q3BRP3|RIMP_XANC5 RecName: Full=Ribosome maturation factor rimP
 gi|78036825|emb|CAJ24518.1| YhbC family protein [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|325544895|gb|EGD16240.1| hypothetical protein XPE_0035 [Xanthomonas perforans 91-118]
          Length = 196

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +            +     ++   + I +D++  AR++  
Sbjct: 125 LRIDAEA------EAVVFAVDGKDVQIGYDNIDKARIVPD 158


>gi|121635281|ref|YP_975526.1| hypothetical protein NMC1555 [Neisseria meningitidis FAM18]
 gi|259585799|sp|A1KV49|RIMP_NEIMF RecName: Full=Ribosome maturation factor rimP
 gi|120866987|emb|CAM10750.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
 gi|325128689|gb|EGC51555.1| hypothetical protein NMXN1568_0547 [Neisseria meningitidis N1568]
 gi|325132775|gb|EGC55457.1| hypothetical protein NMBM6190_0488 [Neisseria meningitidis M6190]
 gi|325136709|gb|EGC59309.1| hypothetical protein NMBM0579_0602 [Neisseria meningitidis M0579]
 gi|325138661|gb|EGC61217.1| hypothetical protein NMBES14902_0645 [Neisseria meningitidis
           ES14902]
 gi|325205640|gb|ADZ01093.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
          Length = 143

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|315302975|ref|ZP_07873695.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596]
 gi|313628655|gb|EFR97068.1| conserved hypothetical protein [Listeria ivanovii FSL F6-596]
          Length = 155

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ +E+    V I+  +E     L+IF+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLDQVEAIVAPITDELHLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF+      V          ++   G +  
Sbjct: 61  EKMDESDPITQNYFLEVSSPGAERPLKKEQDFVNAISKYVHVTSYEPIDGRKMWEGTLES 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +    +  K   E    I  D +  ARL 
Sbjct: 121 FDGETLVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|316984983|gb|EFV63937.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|319410894|emb|CBY91288.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
 gi|325130690|gb|EGC53430.1| hypothetical protein NMBOX9930304_0543 [Neisseria meningitidis
           OX99.30304]
 gi|325140714|gb|EGC63228.1| hypothetical protein NMBCU385_0550 [Neisseria meningitidis CU385]
 gi|325144893|gb|EGC67180.1| hypothetical protein NMBM01240013_0663 [Neisseria meningitidis
           M01-240013]
 gi|325199765|gb|ADY95220.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325204602|gb|ADZ00056.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
          Length = 143

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +  +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELTAQG--TLRVFIDK-ESGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IGKI G      
Sbjct: 59  DI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|77919152|ref|YP_356967.1| hypothetical protein Pcar_1552 [Pelobacter carbinolicus DSM 2380]
 gi|91208010|sp|Q3A4B0|RIMP_PELCD RecName: Full=Ribosome maturation factor rimP
 gi|77545235|gb|ABA88797.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 162

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 13/164 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQ 74
                +   I S++ PV+EE     V +    E    +L++++++  G +TL  C E+S+
Sbjct: 1   MTQQTVLDKIRSLVLPVLEEKGRELVDVEYRREGQGWILRLYIDQP-GGVTLDACAEVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------DK 128
            +  +L+VE+ I+  Y LEVSSPG+DRP+ +  D+ R+ G +   +  +S         +
Sbjct: 60  EVGVLLEVEDPIDTAYNLEVSSPGLDRPLTKLEDYERFAGRLAKVKSRVSIDVDGKGRGR 119

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +  +G + G SE    LE + +     N  ++ I F+ +  A L
Sbjct: 120 KTFVGVLAGLSEGKVVLELKDK-----NGFRMEIPFEDIEKANL 158


>gi|313638096|gb|EFS03363.1| conserved hypothetical protein [Listeria seeligeri FSL S4-171]
          Length = 155

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ +E+    V I+  +E     L+IF+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLDQVEAIVAPITDELHLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF+      V          ++   G +  
Sbjct: 61  EKMDESDPITQNYFLEVSSPGAERPLKKEQDFVNAVSKYVHVTSYEPIDGRKMWEGTLES 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +    +  K   E    I  D +  ARL 
Sbjct: 121 YDGETLVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|103486102|ref|YP_615663.1| hypothetical protein Sala_0609 [Sphingopyxis alaskensis RB2256]
 gi|123380087|sp|Q1GVJ2|RIMP_SPHAL RecName: Full=Ribosome maturation factor rimP
 gi|98976179|gb|ABF52330.1| protein of unknown function DUF150 [Sphingopyxis alaskensis RB2256]
          Length = 181

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 16/177 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPIL 80
             + ++I P  E M    V+++      +  LQ+  ER D   +T+ DC +LS+ IS  L
Sbjct: 5   DALHAIIAPEAEAMGLALVRVAFFGGDSDPTLQVMAERPDTRQLTIDDCADLSRRISDRL 64

Query: 81  DV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D      ++ I+  YRLEVSSPGIDRP+ R +DF  W GH     +      +Q+  G +
Sbjct: 65  DALEEAGQDPIDVAYRLEVSSPGIDRPLTRPADFADWAGHEAKIALKEKLDGRQRFNGTL 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNYGSYA 190
           +G       +  +         ++  + F ++ +A+L++TD+L+ A+  L+  G+  
Sbjct: 125 VGIDGDVVTISDK-------EGVEHKLPFGAIDTAKLVLTDKLIAATVPLSAEGADE 174


>gi|259586208|sp|Q086H4|RIMP_SHEFN RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 71/154 (46%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  ++   +E + F+   I  +   ++ +L++F++  +  + + DC E S+ +S +
Sbjct: 4   IESKLVEMLTVPVEALGFKLWGIEYIQAGRHSILRVFIDH-ENGINIEDCAEASRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE+ I   Y LEVSSPG+DRP+     +  + G     ++ +     + L G I    
Sbjct: 63  MDVEDPISTEYTLEVSSPGVDRPLFTAEQYRAYIGEETKVQLTMPVAGSRNLKGVISSVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                +  + +         + ++ D++    +I
Sbjct: 123 GQMLTITVDGKD--------LIVALDNIRKGNVI 148


>gi|16803361|ref|NP_464846.1| hypothetical protein lmo1321 [Listeria monocytogenes EGD-e]
 gi|224499903|ref|ZP_03668252.1| hypothetical protein LmonF1_09559 [Listeria monocytogenes Finland
           1988]
 gi|224501736|ref|ZP_03670043.1| hypothetical protein LmonFR_04337 [Listeria monocytogenes FSL
           R2-561]
 gi|254828681|ref|ZP_05233368.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254829922|ref|ZP_05234577.1| hypothetical protein Lmon1_01135 [Listeria monocytogenes 10403S]
 gi|254898514|ref|ZP_05258438.1| hypothetical protein LmonJ_01825 [Listeria monocytogenes J0161]
 gi|254911995|ref|ZP_05262007.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936322|ref|ZP_05268019.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284801706|ref|YP_003413571.1| hypothetical protein LM5578_1460 [Listeria monocytogenes 08-5578]
 gi|284994848|ref|YP_003416616.1| hypothetical protein LM5923_1413 [Listeria monocytogenes 08-5923]
 gi|315282174|ref|ZP_07870639.1| conserved hypothetical protein [Listeria marthii FSL S4-120]
 gi|34222940|sp|Q8Y7G0|RIMP_LISMO RecName: Full=Ribosome maturation factor rimP
 gi|16410737|emb|CAC99399.1| lmo1321 [Listeria monocytogenes EGD-e]
 gi|258601085|gb|EEW14410.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258608912|gb|EEW21520.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284057268|gb|ADB68209.1| hypothetical protein LM5578_1460 [Listeria monocytogenes 08-5578]
 gi|284060315|gb|ADB71254.1| hypothetical protein LM5923_1413 [Listeria monocytogenes 08-5923]
 gi|293589959|gb|EFF98293.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|313614178|gb|EFR87857.1| conserved hypothetical protein [Listeria marthii FSL S4-120]
          Length = 155

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ +E+    V I+  +E     L+IF+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++   G ++ 
Sbjct: 61  EKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              T   +    +  K   E    I  D +  ARL 
Sbjct: 121 YDGTTLVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|46907547|ref|YP_013936.1| hypothetical protein LMOf2365_1338 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47093945|ref|ZP_00231682.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|226223922|ref|YP_002758029.1| hypothetical protein Lm4b_01329 [Listeria monocytogenes Clip81459]
 gi|254824620|ref|ZP_05229621.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254852629|ref|ZP_05241977.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254932364|ref|ZP_05265723.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|254993852|ref|ZP_05276042.1| hypothetical protein LmonocytoFSL_13365 [Listeria monocytogenes FSL
           J2-064]
 gi|255521786|ref|ZP_05389023.1| hypothetical protein LmonocFSL_11262 [Listeria monocytogenes FSL
           J1-175]
 gi|300765439|ref|ZP_07075421.1| hypothetical protein LMHG_11499 [Listeria monocytogenes FSL N1-017]
 gi|51316675|sp|Q720A1|RIMP_LISMF RecName: Full=Ribosome maturation factor rimP
 gi|259585784|sp|C1L2M7|RIMP_LISMC RecName: Full=Ribosome maturation factor rimP
 gi|46880815|gb|AAT04113.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017683|gb|EAL08479.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|225876384|emb|CAS05093.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605944|gb|EEW18552.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293583920|gb|EFF95952.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293593858|gb|EFG01619.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300513876|gb|EFK40941.1| hypothetical protein LMHG_11499 [Listeria monocytogenes FSL N1-017]
 gi|328468604|gb|EGF39604.1| ribosome maturation protein RimP [Listeria monocytogenes 1816]
 gi|328475043|gb|EGF45831.1| ribosome maturation protein RimP [Listeria monocytogenes 220]
 gi|332311764|gb|EGJ24859.1| Ribosome maturation factor rimP [Listeria monocytogenes str. Scott
           A]
          Length = 155

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ +E+    V I+  +E     L+IF+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLEQVEAIVTPITDELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++   G ++ 
Sbjct: 61  EKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              T   +    +  K   E    I  D +  ARL 
Sbjct: 121 YDGTTLVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|217964532|ref|YP_002350210.1| hypothetical protein LMHCC_1249 [Listeria monocytogenes HCC23]
 gi|290893568|ref|ZP_06556551.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|254800006|sp|B8DG06|RIMP_LISMH RecName: Full=Ribosome maturation factor rimP
 gi|217333802|gb|ACK39596.1| conserved hypothetical protein [Listeria monocytogenes HCC23]
 gi|290556913|gb|EFD90444.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|307570902|emb|CAR84081.1| conserved hypothetical protein [Listeria monocytogenes L99]
 gi|313608988|gb|EFR84730.1| conserved hypothetical protein [Listeria monocytogenes FSL F2-208]
          Length = 155

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ +E+    V I   +E     L+IF+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLEQVEAIVAPITDELQLELVDIVFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++   G ++ 
Sbjct: 61  EKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              T   +    +  K   E    I  D +  ARL 
Sbjct: 121 YDGTTLVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|257094535|ref|YP_003168176.1| hypothetical protein CAP2UW1_2969 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047059|gb|ACV36247.1| protein of unknown function DUF150 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 155

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 81/163 (49%), Gaps = 13/163 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD--DGNMTLRDCEELSQAISPILD 81
           D+  V++  +  + ++ V +     +  +L++F+++      + + DC  +S  ++ +L 
Sbjct: 2   DLHEVLEVTVTGLGYQLVDVERSP-RGRVLRVFIDKPAKPRGVDVEDCALVSNQLTRVLL 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VENI   + RLEVSSPG+DRP+ ++ DF R+ G  V  ++ L    ++   G + G  + 
Sbjct: 61  VENI--DYERLEVSSPGLDRPLTKEVDFERFAGSEVTIKLRLPLNGRRNFAGVLHGAQDG 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
              ++ +          +I     ++  ARL+   +L ++S  
Sbjct: 119 KVRVQID--------SGEIEFDLANIDKARLVPDFDLKKSSNR 153


>gi|21243418|ref|NP_643000.1| hypothetical protein XAC2689 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|34223124|sp|Q8PJ53|RIMP_XANAC RecName: Full=Ribosome maturation factor rimP
 gi|21108969|gb|AAM37536.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 196

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +          +       ++   + I +D++  AR++  
Sbjct: 125 LRID------AEAAAVVFAVDGKDVQIGYDNIDKARIVPD 158


>gi|323340012|ref|ZP_08080278.1| protein of hypothetical function DUF150 [Lactobacillus ruminis ATCC
           25644]
 gi|323092518|gb|EFZ35124.1| protein of hypothetical function DUF150 [Lactobacillus ruminis ATCC
           25644]
          Length = 157

 Score =  120 bits (302), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P+++E  F  V    ++  K+  L+I++++  G + + +C  +S  + 
Sbjct: 2   SSVVETVTELVTPILDERHFELVDAEFVKEGKSWYLRIYIDKP-GGINIEECALVSDLLG 60

Query: 78  PILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +   I   Y LEVSSPG +RP+ ++ D+ R   + +   +       +   G +
Sbjct: 61  EKLDNCDPDPIPQAYFLEVSSPGAERPLKKERDYERALNYYIHVSLYQPLEGNKVYEGTM 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +        LE   +      +  I I    +  ARL 
Sbjct: 121 VDLKPDELTLEYMDK----TRQKTIVIPRKQIAQARLA 154


>gi|16800426|ref|NP_470694.1| hypothetical protein lin1358 [Listeria innocua Clip11262]
 gi|34222948|sp|Q92C33|RIMP_LISIN RecName: Full=Ribosome maturation factor rimP
 gi|16413831|emb|CAC96589.1| lin1358 [Listeria innocua Clip11262]
 gi|313619130|gb|EFR90920.1| conserved hypothetical protein [Listeria innocua FSL S4-378]
          Length = 155

 Score =  120 bits (302), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ +E+    V I+  +E     L+IF+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF    G  V          ++   G ++ 
Sbjct: 61  EKMDESDPITQNYFLEVSSPGAERPLKKEQDFENAVGKYVHVTSYEPIDGRKMWEGTLVS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              T   +    +  K   E    I  D +  ARL 
Sbjct: 121 YDGTTLVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|289434602|ref|YP_003464474.1| hypothetical protein lse_1237 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170846|emb|CBH27388.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 155

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ +E+    V I+  +E     L++F+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLDQVEAIVAPITDELHLELVDIAFEKEGPNWFLRVFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF+      V          ++   G +  
Sbjct: 61  EKMDESDPITQNYFLEVSSPGAERPLKKEQDFVNAVSKYVHVTSYEPIDGRKMWEGTLES 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +    +  K   E    I  D +  ARL 
Sbjct: 121 YDGETLVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|319892282|ref|YP_004149157.1| transcription termination protein NusA-like protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161978|gb|ADV05521.1| transcription termination protein NusA-like protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464621|gb|ADX76774.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 155

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++IQPV++E++F  V +   +E     L+I +++  G + L DC   S+ IS
Sbjct: 2   SKVTEQVETIIQPVLDELNFELVDVEFAKEGRDHYLRIAIDKP-GGVDLNDCTLASERIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++D ++ I   Y L+VSSPG +RP+  +  F       +   +       ++ +G +  
Sbjct: 61  EVMDEQDPIPQAYYLDVSSPGAERPIKNEKGFQNAIEQPIFVSLYAPIEGDKEWLGHLKS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            +E    +E + + +       I I  D +  AR
Sbjct: 121 VTEDAITMEVKVKAKTK----TITIPRDKIAKAR 150


>gi|311068182|ref|YP_003973105.1| hypothetical protein BATR1942_06100 [Bacillus atrophaeus 1942]
 gi|310868699|gb|ADP32174.1| hypothetical protein BATR1942_06100 [Bacillus atrophaeus 1942]
          Length = 157

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +      + QP+ + +    V I  ++E  N  L++F++  D  + + +C ++S+ 
Sbjct: 1   MSKKVIDTAREMAQPIADNLQLELVDIEFVKEGQNWFLRVFIDS-DNGVDIEECAKVSEL 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + I  +Y LEVSSPG +RP+ +K+DF R  G  V  +        +   G++
Sbjct: 60  LSEKLDEADPISQNYFLEVSSPGAERPLKKKADFDRSLGKNVYIKTYEPIDGVKVFEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +E   +      + +I I ++ + +ARL V
Sbjct: 120 AEFDGQTVTVEMTIK----TRKKRINIPYEKIANARLAV 154


>gi|254521461|ref|ZP_05133516.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
 gi|219719052|gb|EED37577.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
          Length = 196

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 83/163 (50%), Gaps = 12/163 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEEL 72
              A DI++++ P +  +    + +  L       L+++++     + +  + + DCE +
Sbjct: 2   SDKATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERIINVDDCERV 61

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  +DVE+ I G+Y LEVSSPG+DRP+     F R  G +    + L   ++++L 
Sbjct: 62  SREVSAQMDVEDPISGNYTLEVSSPGVDRPLFNLEQFGRHLGEMAKVTLKLPQDNRRRLQ 121

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           G+I  T E    +         +++ ++ +S D++  AR++  
Sbjct: 122 GRIEATDEAADTITF------VVDKTEVIVSADNIDKARIMPD 158


>gi|15614980|ref|NP_243283.1| hypothetical protein BH2417 [Bacillus halodurans C-125]
 gi|34223162|sp|Q9KA73|RIMP_BACHD RecName: Full=Ribosome maturation factor rimP
 gi|10175037|dbj|BAB06136.1| BH2417 [Bacillus halodurans C-125]
          Length = 156

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 6/159 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +    + +++P++E++      +   +  K+  L++F++  +  + L DC ++S+ 
Sbjct: 1   MGKKVVDITAELVKPILEQLDLELYDVEFKKEGKDWFLRVFIDS-ETGVDLEDCGKVSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + IE  Y LEVSSPG +RP+ R+ D LR  G  V   +      ++ L G++
Sbjct: 60  LSEKLDETDPIEQAYFLEVSSPGAERPLKREKDLLRSIGKNVHVTLYEPIDGEKALEGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    +E     +    +  + I +  + SARL V
Sbjct: 120 TEFDGETLTIEI----KIKTRKKTVTIPYAKVASARLAV 154


>gi|239999348|ref|ZP_04719272.1| hypothetical protein Ngon3_07677 [Neisseria gonorrhoeae 35/02]
 gi|240014532|ref|ZP_04721445.1| hypothetical protein NgonD_07784 [Neisseria gonorrhoeae DGI18]
 gi|240016978|ref|ZP_04723518.1| hypothetical protein NgonFA_07392 [Neisseria gonorrhoeae FA6140]
 gi|240081420|ref|ZP_04725963.1| hypothetical protein NgonF_08941 [Neisseria gonorrhoeae FA19]
 gi|240113615|ref|ZP_04728105.1| hypothetical protein NgonM_08610 [Neisseria gonorrhoeae MS11]
 gi|240118337|ref|ZP_04732399.1| hypothetical protein NgonPID_07718 [Neisseria gonorrhoeae PID1]
 gi|240121054|ref|ZP_04734016.1| hypothetical protein NgonPI_04654 [Neisseria gonorrhoeae PID24-1]
 gi|240123885|ref|ZP_04736841.1| hypothetical protein NgonP_08079 [Neisseria gonorrhoeae PID332]
 gi|240126084|ref|ZP_04738970.1| hypothetical protein NgonSK_07689 [Neisseria gonorrhoeae SK-92-679]
          Length = 143

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELVDFELAAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G      
Sbjct: 59  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|15605802|ref|NP_213179.1| hypothetical protein aq_260 [Aquifex aeolicus VF5]
 gi|6647906|sp|O66619|RIMP_AQUAE RecName: Full=Ribosome maturation factor rimP
 gi|2982974|gb|AAC06588.1| hypothetical protein aq_260 [Aquifex aeolicus VF5]
          Length = 158

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 8/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  +++PVI  M F+   +      +  +L+I  ++ +G +T++DCEE+S+
Sbjct: 3   INREEIEKKVKEIVEPVIRGMGFKLFDVEFKPEGRGWVLRIIADK-EGGITIKDCEEISR 61

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S +LDVE+II   Y LE++SPG+ RP+ +   +  + G +V   +      K++++G 
Sbjct: 62  KVSALLDVEDIIPFSYLLEITSPGLTRPLTKVEHYDFFKGRLVKLILKEPIEGKREVVGY 121

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           I         + ++++G+       + I F ++   RL
Sbjct: 122 IEDVKNGIIDIREKEKGK------VLHIPFSAIAKGRL 153


>gi|242242548|ref|ZP_04796993.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           W23144]
 gi|242233975|gb|EES36287.1| protein of hypothetical function DUF150 [Staphylococcus epidermidis
           W23144]
 gi|319401445|gb|EFV89655.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
          Length = 155

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++IQPV+ ++ F  V I  ++  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQVEALIQPVLNDLDFELVDIEYVKEGKDHFLRISIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++D  + I   Y L+V+SPG +RP+ ++ DF       +   +       ++ +G +  
Sbjct: 61  EVMDENDPIPEMYYLDVASPGAERPIKKEKDFYNAINQPIFVSLYAPIEGDKEWLGILKS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            ++    +E +++ +      +I I  + +  AR
Sbjct: 121 VNDESINMEVKEKAKTK----EIEIPRNKIAKAR 150


>gi|325921397|ref|ZP_08183254.1| hypothetical protein XGA_2246 [Xanthomonas gardneri ATCC 19865]
 gi|325548155|gb|EGD19152.1| hypothetical protein XGA_2246 [Xanthomonas gardneri ATCC 19865]
          Length = 196

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 78/160 (48%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  GKI
Sbjct: 65  VSAQLDVEDPITGNYTLEVSSPGVDRPLFTLEQFARHVGESAKIVLKLAQDGRRRFQGKI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +                  ++   + I FD++  AR++  
Sbjct: 125 LRIEAEA------DAVVFAIDGKDVQIGFDNIDKARILPD 158


>gi|167587340|ref|ZP_02379728.1| hypothetical protein BuboB_18484 [Burkholderia ubonensis Bu]
          Length = 152

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++    ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MLCIYIDQP-AGISLDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G   +  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEASVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E+          +  +   +  ARLI   +
Sbjct: 117 GLEFERN---KGEAAMLDFTLADIDKARLIPQVD 147


>gi|66767927|ref|YP_242689.1| hypothetical protein XC_1603 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|81306096|sp|Q4UWA4|RIMP_XANC8 RecName: Full=Ribosome maturation factor rimP
 gi|66573259|gb|AAY48669.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 196

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + D  + + DCE +S+ 
Sbjct: 5   ATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +        +         ++   + I F ++  AR++  
Sbjct: 125 VRIDTEAAAVVF------SVDGKDVQIGFGNIDKARILPD 158


>gi|320354997|ref|YP_004196336.1| hypothetical protein Despr_2912 [Desulfobulbus propionicus DSM
           2032]
 gi|320123499|gb|ADW19045.1| protein of unknown function DUF150 [Desulfobulbus propionicus DSM
           2032]
          Length = 153

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 83/151 (54%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I    +P++ +M    V++    E    +L+ F+++ +G +T+ DC ++S+ IS  L+VE
Sbjct: 12  IQGFAEPLLADMGMELVEVQFRREGHGWVLRFFIDK-EGGITIDDCADVSREISAYLEVE 70

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++I+  Y LEVSSPG++RP+ +K DF R+   ++  ++    G+++ L G ++G      
Sbjct: 71  DLIDHAYHLEVSSPGLERPLRKKEDFHRFIDRLIRVKLREPLGEQKVLTGTLLGMEGDTV 130

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            L  +           + I ++++  ARL +
Sbjct: 131 LLALDSE--------TVRIDWENISKARLTL 153


>gi|149185834|ref|ZP_01864149.1| hypothetical protein ED21_23911 [Erythrobacter sp. SD-21]
 gi|148830395|gb|EDL48831.1| hypothetical protein ED21_23911 [Erythrobacter sp. SD-21]
          Length = 185

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 19/180 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL----EEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
             ++ VI+P  + + F  V++ ++     +  + LQI  E      + +  C  LS+ +S
Sbjct: 5   ERLTEVIEPEAQALGFELVRVKMVPSEAGDGGMALQIMAEDPATGQLVIEQCAALSRRVS 64

Query: 78  PILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            +LD      E ++ G Y LEVSSPGIDRP+ R  DF  W GH     +       + + 
Sbjct: 65  DMLDQLEEQGEVLVPGAYHLEVSSPGIDRPLTRAKDFENWAGHEAKIALTEKVHGYRTVK 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNYGSYA 190
           G++ G       ++            +++   + + SA+L++TDEL+ A+  L+  G+  
Sbjct: 125 GELKGIDGDMVTVDIPGA-------KEVSFPRNLIHSAKLVLTDELIAATQPLDTSGADD 177


>gi|308068696|ref|YP_003870301.1| hypothetical protein PPE_01927 [Paenibacillus polymyxa E681]
 gi|305857975|gb|ADM69763.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 153

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  + QP ++E  F  V +  ++   N  L++FV++ DG + L DC  +S+
Sbjct: 1   MSTPKIKSVVEEMAQPYLDEHGFELVDVEYVKEGSNWFLRVFVDK-DGGIDLDDCSMISE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +   LD  + +   Y LEVSSPG +RP+ +  D  +  G  V           ++  G+
Sbjct: 60  YLGQKLDENDPVSTAYFLEVSSPGAERPLKKAEDVTKAVGKNVFVTTYEPINGLKEFEGR 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++   +    ++          + +  I +D +  ARL 
Sbjct: 120 LLSFEDGELTVQ--------SGQKKHVIPYDKVAGARLA 150


>gi|222151099|ref|YP_002560253.1| hypothetical protein MCCL_0850 [Macrococcus caseolyticus JCSC5402]
 gi|254806624|sp|B9EBE6|RIMP_MACCJ RecName: Full=Ribosome maturation factor rimP
 gi|222120222|dbj|BAH17557.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 155

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++ QPV+E + F  V +  ++E     L+I +++  G + + DC   S+ IS
Sbjct: 2   SKVTERVEAICQPVVESLGFELVDVEYVKEGPDYYLRIAIDKP-GGIDISDCALASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++D E+ I   Y L+VSSPG +RP+ ++ D+    G  V  ++       ++ IG++  
Sbjct: 61  EVMDKEDPITEAYFLDVSSPGAERPLKKEKDYENAIGKHVYVKLYEPVEGDKEWIGELKE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            S+    L      +       I I    +   RL V
Sbjct: 121 VSKDTITLS----AKIKTRTKVIEIDRKRIAKIRLAV 153


>gi|261867878|ref|YP_003255800.1| hypothetical protein D11S_1199 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413210|gb|ACX82581.1| protein YhbC [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 151

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q  +E+   +   I      + L +++F+++ +G +T+ DC ++S+ +S +
Sbjct: 4   LEQKLQDLLQGSVEDFGCQLWGIECQRVGRYLTVRLFIDK-EGGVTVEDCADVSRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+   + + R+ G  +   + +   D++K  G++    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLAQYARYVGQEILVHLRIPVADRRKWQGELAKIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +K+ +         ++F ++  A ++
Sbjct: 123 NDMITLIVDKQEQI--------LAFGNIQKASVV 148


>gi|94263058|ref|ZP_01286877.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
 gi|94272102|ref|ZP_01292068.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
 gi|93450238|gb|EAT01519.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
 gi|93456601|gb|EAT06709.1| Protein of unknown function DUF150 [delta proteobacterium MLMS-1]
          Length = 155

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 10/158 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQA 75
            D  L+  ++ ++QPV+E+       +    E    +L++ ++ DD  +TL DC  +S+ 
Sbjct: 4   ADKALSARLTELLQPVVEDHGLELADLQFRREPAGWVLRLVIDGDD-GVTLDDCTRISRE 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +L+VE+ IE  + LEVSSPG+DRP+ R+ D+ R  G             +  +IG+I
Sbjct: 63  VSHLLEVEDPIEQAFNLEVSSPGLDRPLKREQDYRRCRGRKAKLVCREPIAGEPVVIGEI 122

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +E    +  E           +A+    +  ARL+
Sbjct: 123 GEMAEQVVTIITE--------AGPVAVPLAQVKRARLV 152


>gi|115351433|ref|YP_773272.1| hypothetical protein Bamb_1380 [Burkholderia ambifaria AMMD]
 gi|170700024|ref|ZP_02891049.1| protein of unknown function DUF150 [Burkholderia ambifaria
           IOP40-10]
 gi|171317090|ref|ZP_02906293.1| protein of unknown function DUF150 [Burkholderia ambifaria MEX-5]
 gi|172060472|ref|YP_001808124.1| hypothetical protein BamMC406_1420 [Burkholderia ambifaria MC40-6]
 gi|122323374|sp|Q0BFY5|RIMP_BURCM RecName: Full=Ribosome maturation factor rimP
 gi|226734154|sp|B1YP34|RIMP_BURA4 RecName: Full=Ribosome maturation factor rimP
 gi|115281421|gb|ABI86938.1| protein of unknown function DUF150 [Burkholderia ambifaria AMMD]
 gi|170135083|gb|EDT03386.1| protein of unknown function DUF150 [Burkholderia ambifaria
           IOP40-10]
 gi|171097724|gb|EDT42551.1| protein of unknown function DUF150 [Burkholderia ambifaria MEX-5]
 gi|171992989|gb|ACB63908.1| protein of unknown function DUF150 [Burkholderia ambifaria MC40-6]
          Length = 152

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++    ++L DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MLCIYIDQL-AGISLEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V+  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E    K      +  +   +  ARLI   +
Sbjct: 117 GLEFEG---KKGEAAMLDFTLADIDKARLIPQVD 147


>gi|94310971|ref|YP_584181.1| hypothetical protein Rmet_2033 [Cupriavidus metallidurans CH34]
 gi|166980260|sp|Q1LLR4|RIMP_RALME RecName: Full=Ribosome maturation factor rimP
 gi|93354823|gb|ABF08912.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 162

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 77/151 (50%), Gaps = 4/151 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S+ ++ +L VE
Sbjct: 2   HLADLIETTLIGMGYELVELERAPAG--LLRVYIDQPETGIVIEDCEKVSRQLTHVLTVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ + +DF+R+ G  V   + L    ++  +G +   +    
Sbjct: 60  NV--DYERLEVSSPGLDRPLKKLADFVRFAGAEVRVTLRLPVNGQKNFVGILCEPAGDAG 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E       +  +   +  ARL+ 
Sbjct: 118 AEKIGLEFEGKDGPALLEFAISDVDRARLVP 148


>gi|310778371|ref|YP_003966704.1| protein of unknown function DUF150 [Ilyobacter polytropus DSM 2926]
 gi|309747694|gb|ADO82356.1| protein of unknown function DUF150 [Ilyobacter polytropus DSM 2926]
          Length = 158

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 11/159 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               +   I  +  PV  E     V I  L++     +++++E+ D  +TL DC  +S  
Sbjct: 5   AKAAIVEKIWDLTTPVASEFGLDIVDIEYLQDGGYWYVRVYIEKPDAEITLVDCANVSNR 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I    DV+ +I+  + LEVSSPGI+RP+  + DF+R+ G      +     D +   G+I
Sbjct: 65  IEE--DVDALIDKKFFLEVSSPGIERPLKSEKDFIRFVGEKARLILKHKLEDSRNWTGEI 122

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +L  + +         + I F  +  A L+ 
Sbjct: 123 SSFENGIIYLSTDGKK--------LEIPFSEVKKANLVF 153


>gi|257865908|ref|ZP_05645561.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257872241|ref|ZP_05651894.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257875535|ref|ZP_05655188.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257799842|gb|EEV28894.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257806405|gb|EEV35227.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257809701|gb|EEV38521.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 157

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++ P+++   F  V++  ++  KN  L++F+++ +G + + +C  +S+ +S  
Sbjct: 4   VVETVTDIVTPILDAQKFELVEVEFVKEGKNWFLRVFIDK-EGGIDIEECAFVSEQLSEQ 62

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    + I   Y LEVSSPG +RP+ +++D+ R  G  +   +      +++  G +  
Sbjct: 63  LDQCEPDPIPQAYFLEVSSPGAERPLKKEADYQRAVGEYIHVSLYQPIDGEKQFEGFLQS 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             E    +    +      E +  I   ++  ARL 
Sbjct: 123 FDENQLVI----KTRIKTREKERTIDRKNIAKARLA 154


>gi|325915553|ref|ZP_08177864.1| hypothetical protein XVE_1758 [Xanthomonas vesicatoria ATCC 35937]
 gi|325538269|gb|EGD09954.1| hypothetical protein XVE_1758 [Xanthomonas vesicatoria ATCC 35937]
          Length = 196

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P +E +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I G+Y LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHAGESAKIVLKLAQDGRRRFQGQI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           + T                ++   + I FD++  AR++  
Sbjct: 125 LRTETEA------DAVVFSVDGKDVQIGFDNIDKARILPD 158


>gi|238027586|ref|YP_002911817.1| hypothetical protein bglu_1g20040 [Burkholderia glumae BGR1]
 gi|237876780|gb|ACR29113.1| Hypothetical protein bglu_1g20040 [Burkholderia glumae BGR1]
          Length = 153

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L +++++    +++ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MLCVYIDQP-AGISIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  ++  +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEISVTLKKPLEGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            LE E    K      +  +   +  ARLI   +
Sbjct: 117 GLEFE---MKKGEAAMLDFTLADIDKARLIPQVD 147


>gi|85373512|ref|YP_457574.1| hypothetical protein ELI_03425 [Erythrobacter litoralis HTCC2594]
 gi|122544926|sp|Q2NC14|RIMP_ERYLH RecName: Full=Ribosome maturation factor rimP
 gi|84786595|gb|ABC62777.1| hypothetical protein ELI_03425 [Erythrobacter litoralis HTCC2594]
          Length = 188

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 19/182 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL----EEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
             ++++I+P  + + F  V++ ++     +    LQI  E      + +  C ELS+ +S
Sbjct: 5   ARLTALIEPEAKALGFELVRVKMMPSEAGDGGQALQIMAEDPATGQLLIEQCAELSRKVS 64

Query: 78  PILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ++D      E +IEG Y LEVSSPGIDRP+ R  DF  W GH     +V      + + 
Sbjct: 65  DVIDAAEESGEVLIEGAYHLEVSSPGIDRPLTRPKDFADWAGHEAKVSLVEKIDGHRNMR 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNYGSYA 190
           G ++G       +   + G       +++ + + + SA+L++TD+L+ A+  L+  G+  
Sbjct: 125 GILLGIDGETVTIADNRAG-------EVSFALEQIHSAKLVLTDKLIAATQPLDADGAEE 177

Query: 191 GL 192
            L
Sbjct: 178 VL 179


>gi|194366590|ref|YP_002029200.1| hypothetical protein Smal_2817 [Stenotrophomonas maltophilia
           R551-3]
 gi|226701526|sp|B4SQS2|RIMP_STRM5 RecName: Full=Ribosome maturation factor rimP
 gi|194349394|gb|ACF52517.1| protein of unknown function DUF150 [Stenotrophomonas maltophilia
           R551-3]
          Length = 196

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 12/163 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEEL 72
              A DI++++ P +  +    + +  L       L+++++     + +  + + DCE +
Sbjct: 2   SDKATDIANLLAPTVVSLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERIINVDDCERV 61

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  +DVE+ I G+Y LEVSSPG+DRP+     F R  G      + L   ++++L 
Sbjct: 62  SREVSAQMDVEDPISGNYTLEVSSPGVDRPLFNLEQFGRHLGESAKVTLKLPQDNRRRLQ 121

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           G+I    E    +         +++ ++ +S D++  AR++  
Sbjct: 122 GRIEAIDEAAGAITF------IVDKAEVVVSADNIDKARIMPD 158


>gi|206900815|ref|YP_002250929.1| YlxS [Dictyoglomus thermophilum H-6-12]
 gi|259585753|sp|B5YEH1|RIMP_DICT6 RecName: Full=Ribosome maturation factor rimP
 gi|206739918|gb|ACI18976.1| YlxS [Dictyoglomus thermophilum H-6-12]
          Length = 156

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 10/153 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P+ E+ S+  V +    E    +L++++++  G +T+ DC  LS+ IS  LD
Sbjct: 11  KKLKEIVEPICEKYSYELVDLEYRREPHGWVLRVYIDKV-GGVTVEDCAYLSEKISKELD 69

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           +++ I   Y LEVSSPG+DRP+ RK DF R  G  V   ++     K+K  GKI    E+
Sbjct: 70  IKDPIPHSYILEVSSPGLDRPLKRKRDFERHMGEKVNITLLEEIEGKKKFEGKIFKVDES 129

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              L+ +           + I  + +  A LIV
Sbjct: 130 SVTLKIDDSF--------VTIPLEKIKKAMLIV 154


>gi|256827234|ref|YP_003151193.1| hypothetical protein Ccur_08070 [Cryptobacterium curtum DSM 15641]
 gi|256583377|gb|ACU94511.1| uncharacterized conserved protein [Cryptobacterium curtum DSM
           15641]
          Length = 177

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 8/168 (4%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNM 64
           F  S  +       G    +   ++P   E     V I ++   K   +++F++  D  +
Sbjct: 9   FFCSGRKRGCQILTGKETRLLEALEPTAREKGIEIVSIEIVGSRKAPTIRVFIDTPD-GV 67

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           +          I+ I+D  +   G Y LEVSSPGIDRP+     F R++G      +   
Sbjct: 68  SFDALASAQSWINEIMDAIDPFPGAYMLEVSSPGIDRPLRTPEHFQRFSGQEAQIVLRAP 127

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              + K  G + G ++    L  +   E        +I++D++  A L
Sbjct: 128 IDGRSKFTGMLKGFADGAVLLLVDGADEVT------SINYDAIKRAHL 169


>gi|325290364|ref|YP_004266545.1| Ribosome maturation factor rimP [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965765|gb|ADY56544.1| Ribosome maturation factor rimP [Syntrophobotulus glycolicus DSM
           8271]
          Length = 152

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +++P+ EE+    V +  ++   +  L++++++ DG + + DC  +S  +S I
Sbjct: 5   VIQKVWQIVEPITEELKLELVDVEYVKEGAHWYLRVYIDK-DGGVDIDDCASVSHQLSNI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD +N+I   Y LEVSSPGI+RP+ ++ D+ ++ G +V            +  G + G  
Sbjct: 64  LDSKNLIPQAYMLEVSSPGIERPLSKREDYDKYIGKLVRVHTSEQFLGYTQFSGYLKGLL 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    LE E          + AI  + +  A L
Sbjct: 124 DEKVILEYEG--------QEAAIPINIVEKAHL 148


>gi|259585805|sp|Q0AFJ1|RIMP_NITEC RecName: Full=Ribosome maturation factor rimP
          Length = 143

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 11/150 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++P I  M +  V I        LL++FV++ DG +TL DC  +S  +  +L VEN
Sbjct: 3   LFELLEPTIAGMGYELVDIEQSAPGR-LLRVFVDKKDGAITLADCVAVSNHLGQLLAVEN 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           I   + RLEVSSPG+DRP+ +++DF+R+ G  +   + ++   ++  +G +    +    
Sbjct: 62  I--DYNRLEVSSPGLDRPLKKRADFVRFVGESIRIRLRIALQGQRNFVGTLTEVGDDALM 119

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           L  + +         +     +L  ARLI 
Sbjct: 120 LNVDGKL--------LQFELKNLEKARLIP 141


>gi|313623921|gb|EFR94029.1| conserved hypothetical protein [Listeria innocua FSL J1-023]
          Length = 155

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ +E+    V I+  +E     L+IF+++ DG + + +C  +S+ +S
Sbjct: 2   SKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDK-DGGVDIDECAAVSEKVS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I  +Y LEVSSPG +RP+ ++ DF    G  V          ++   G ++ 
Sbjct: 61  EKMDESDPITQNYFLEVSSPGAERPLKKEQDFENAVGKYVHVTSYEPIDGRKMWEGTLVS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              T   +    +  K   E    I  D +  ARL 
Sbjct: 121 YDGTILVITITDKTRKITCE----IPKDKVAKARLA 152


>gi|160871632|ref|ZP_02061764.1| 15 kDa protein [Rickettsiella grylli]
 gi|159120431|gb|EDP45769.1| 15 kDa protein [Rickettsiella grylli]
          Length = 153

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 85/151 (56%), Gaps = 10/151 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I + + P IE + +       L E     L+I+++  +  +TL DCE +S+ +  +LDVE
Sbjct: 8   IEARLSPTIEALGYELWACVYLREGQKNRLRIYIDS-EKGITLSDCERVSRQVGALLDVE 66

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++++GHY LEVSSPG+DRP++++  F R+ G+ +   +     +++K  G +  T  +G 
Sbjct: 67  DLLQGHYHLEVSSPGLDRPLIKEDHFQRYVGYPIHVFLQSPIDNQRKFKGLLQSTRASGI 126

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            L +E +        +  +++D++L A ++ 
Sbjct: 127 VLNREGK--------EFVLTWDNILHANVLP 149


>gi|241662812|ref|YP_002981172.1| hypothetical protein Rpic12D_1208 [Ralstonia pickettii 12D]
 gi|309782265|ref|ZP_07676993.1| hypothetical protein HMPREF1004_03620 [Ralstonia sp. 5_7_47FAA]
 gi|240864839|gb|ACS62500.1| protein of unknown function DUF150 [Ralstonia pickettii 12D]
 gi|308918958|gb|EFP64627.1| hypothetical protein HMPREF1004_03620 [Ralstonia sp. 5_7_47FAA]
          Length = 162

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 4/151 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VE
Sbjct: 2   HLTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAENGVVIEDCEKVSHQLTRVFEVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+   +DF R+ G      + L    ++   G I   +    
Sbjct: 60  NV--NYERLEVSSPGLDRPLRTLADFTRFAGLEAKVTLRLPVNGQKNFTGIIQAPTGEPG 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   E       +  +   L  ARL+ 
Sbjct: 118 QERIGLEFEGKEGPALLEFTLSELDRARLVP 148


>gi|187928208|ref|YP_001898695.1| hypothetical protein Rpic_1115 [Ralstonia pickettii 12J]
 gi|226696216|sp|B2UAA1|RIMP_RALPJ RecName: Full=Ribosome maturation factor rimP
 gi|187725098|gb|ACD26263.1| protein of unknown function DUF150 [Ralstonia pickettii 12J]
          Length = 162

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 4/151 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VE
Sbjct: 2   HLTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAENGVVIEDCEKVSHQLTRVFEVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+   +DF R+ G      + L    ++   G I   +    
Sbjct: 60  NV--NYERLEVSSPGLDRPLRTLADFTRFAGLEAKVTLRLPVDGQKNFTGIIQAPTGEPG 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   E       +  +   L  ARL+ 
Sbjct: 118 QERIGLEFEGKEGPALLGFTLSELDRARLVP 148


>gi|148825865|ref|YP_001290618.1| hypothetical protein CGSHiEE_04150 [Haemophilus influenzae PittEE]
 gi|229846822|ref|ZP_04466929.1| hypothetical protein CGSHi7P49H1_02333 [Haemophilus influenzae
           7P49H1]
 gi|167012908|sp|A5UBT4|RIMP_HAEIE RecName: Full=Ribosome maturation factor rimP
 gi|148716025|gb|ABQ98235.1| hypothetical protein CGSHiEE_04150 [Haemophilus influenzae PittEE]
 gi|229810311|gb|EEP46030.1| hypothetical protein CGSHi7P49H1_02333 [Haemophilus influenzae
           7P49H1]
 gi|309973010|gb|ADO96211.1| 30S ribosomal maturation protein RimP [Haemophilus influenzae
           R2846]
          Length = 151

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRMGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +  +        F ++  A ++
Sbjct: 123 KDMITLIVDDQEQILV--------FGNIQKANVV 148


>gi|90961544|ref|YP_535460.1| hypothetical protein LSL_0568 [Lactobacillus salivarius UCC118]
 gi|227890632|ref|ZP_04008437.1| protein of hypothetical function DUF150 [Lactobacillus salivarius
           ATCC 11741]
 gi|301300280|ref|ZP_07206489.1| conserved hypothetical protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|122449172|sp|Q1WUF8|RIMP_LACS1 RecName: Full=Ribosome maturation factor rimP
 gi|90820738|gb|ABD99377.1| Conserved hypothetical protein [Lactobacillus salivarius UCC118]
 gi|227867570|gb|EEJ74991.1| protein of hypothetical function DUF150 [Lactobacillus salivarius
           ATCC 11741]
 gi|300852121|gb|EFK79796.1| conserved hypothetical protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 157

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +++++ P+++E  F  V +  ++  K+  L++++++ +  + + +C  +S  +S
Sbjct: 2   SSVVETVTNLVTPILDENHFELVDVEFVKEGKSWYLRVYIDKPN-GINIEECALVSDKLS 60

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+ ++ D+ R     +   +  +   ++   G +
Sbjct: 61  EKLDSCDPDPIPQAYYLEVSSPGAERPLKKEKDYERALNKYIHISLYQAIDGQKVYEGTM 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +  ++    LE           +      + +  ARL 
Sbjct: 121 VDLNKETLTLEY----RVKTRTVTKTFDRNKIAKARLA 154


>gi|302392349|ref|YP_003828169.1| hypothetical protein Acear_1598 [Acetohalobium arabaticum DSM 5501]
 gi|302204426|gb|ADL13104.1| protein of unknown function DUF150 [Acetohalobium arabaticum DSM
           5501]
          Length = 153

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 9/159 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +A  I  + +P++E+     V     +E  +  +++FV++ +  +TL DC+++S+ 
Sbjct: 1   MGQKIADYIFDLARPIVEDHGLELVDTEYQKEGQDWTVRVFVDKPE-GVTLDDCQKISRE 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           IS  LD+E+ IE  Y LEVSSPG+DRP+  + DF R+ GH++          ++   G++
Sbjct: 60  ISDRLDIEDPIEKSYILEVSSPGLDRPLKDEEDFKRFTGHLIDVSTYAPVNGEKSFTGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   +    L+ +        +  + IS D +  A L +
Sbjct: 120 LEIIDDKVKLKLDN-------DDVVEISRDKIAKANLAL 151


>gi|296285013|ref|ZP_06863011.1| hypothetical protein CbatJ_15405 [Citromicrobium bathyomarinum
           JL354]
          Length = 188

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 19/184 (10%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL----EEKNLLLQIFVERDDGN-MTLRDCEELS 73
           M     ++ +I+P  + + F  V++ ++     +    LQI  E      + +  C  LS
Sbjct: 1   MADIARLTQIIEPEAQALGFELVRVKMMPSEAGDGTQALQIMAEDPATGQLVIEQCAALS 60

Query: 74  QAISPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           +A+S  +D      + +IEG Y LEVSSPGIDRP+ R  DF  W GH     +      +
Sbjct: 61  RAVSAKIDALEEQGDVLIEGAYHLEVSSPGIDRPLTRTKDFSDWAGHEAKISMAKGYDGQ 120

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNY 186
           +   G + G       +   K G        + +  D + SA+L++TDEL+ A+  L+  
Sbjct: 121 RNYRGSLKGIEGDMVTITDRKAG-------DVELPRDQIHSAQLVLTDELIAATRPLDTT 173

Query: 187 GSYA 190
           G+  
Sbjct: 174 GAEE 177


>gi|224476388|ref|YP_002633994.1| hypothetical protein Sca_0900 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254807265|sp|B9DPF1|RIMP_STACT RecName: Full=Ribosome maturation factor rimP
 gi|222420995|emb|CAL27809.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 155

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   I  +IQPV+++++F  V+I   +  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQIEEIIQPVLDDLNFELVEIEFTKEGKDHFLRISIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +++ E+ IE  Y L+V+SPG +RP+             V   +       ++ +G +  
Sbjct: 61  EVMNEEDPIEQMYYLDVASPGAERPIKTDKALHDAVEQPVFVSLYAPIDGSKEWLGVLQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            ++    +    + +    + ++ I  + +  AR
Sbjct: 121 VTDDHIVI----KAQVKEKKKEVEIPRNKIAKAR 150


>gi|73662812|ref|YP_301593.1| hypothetical protein SSP1503 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582354|sp|Q49X50|RIMP_STAS1 RecName: Full=Ribosome maturation factor rimP
 gi|72495327|dbj|BAE18648.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 155

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 80/154 (51%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++IQPV+ +++F  V++   +  K+  L++ +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQVETIIQPVLNDLNFELVEVEFTKEGKDHFLRVSIDK-EGGVDLNDCALASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++D E+ I+  Y L+V+SPG +RP+ ++ DF       V   +       ++ +G +  
Sbjct: 61  EVMDAEDPIQEMYYLDVASPGAERPIKKEKDFQNAITKPVFVSLYAPIEGSKEWLGILQS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             ET   +E +++ +      QI I  + +  AR
Sbjct: 121 VDETNIVMEVKEKAKTK----QIEIPRNKIAKAR 150


>gi|30995436|ref|NP_439434.2| hypothetical protein HI1282 [Haemophilus influenzae Rd KW20]
 gi|145633249|ref|ZP_01788980.1| hypothetical protein CGSHi3655_03431 [Haemophilus influenzae 3655]
 gi|145634373|ref|ZP_01790083.1| hypothetical protein CGSHiAA_06269 [Haemophilus influenzae PittAA]
 gi|148827022|ref|YP_001291775.1| hypothetical protein CGSHiGG_01570 [Haemophilus influenzae PittGG]
 gi|229845093|ref|ZP_04465228.1| hypothetical protein CGSHi6P18H1_00035 [Haemophilus influenzae
           6P18H1]
 gi|260581404|ref|ZP_05849218.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|260582502|ref|ZP_05850293.1| conserved hypothetical protein [Haemophilus influenzae NT127]
 gi|329123361|ref|ZP_08251926.1| YhbC family protein [Haemophilus aegyptius ATCC 11116]
 gi|34223728|sp|P45138|RIMP_HAEIN RecName: Full=Ribosome maturation factor rimP
 gi|166979796|sp|A5UF36|RIMP_HAEIG RecName: Full=Ribosome maturation factor rimP
 gi|144986095|gb|EDJ92685.1| hypothetical protein CGSHi3655_03431 [Haemophilus influenzae 3655]
 gi|145268353|gb|EDK08347.1| hypothetical protein CGSHiAA_06269 [Haemophilus influenzae PittAA]
 gi|148718264|gb|ABQ99391.1| hypothetical protein CGSHiGG_01570 [Haemophilus influenzae PittGG]
 gi|229811929|gb|EEP47623.1| hypothetical protein CGSHi6P18H1_00035 [Haemophilus influenzae
           6P18H1]
 gi|260091946|gb|EEW75895.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|260094482|gb|EEW78379.1| conserved hypothetical protein [Haemophilus influenzae NT127]
 gi|327471361|gb|EGF16813.1| YhbC family protein [Haemophilus aegyptius ATCC 11116]
          Length = 151

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +  +        F ++  A ++
Sbjct: 123 KDMITLIVDDQEQILV--------FGNIQKANVV 148


>gi|299823035|ref|ZP_07054921.1| protein of hypothetical function DUF150 [Listeria grayi DSM 20601]
 gi|299816564|gb|EFI83802.1| protein of hypothetical function DUF150 [Listeria grayi DSM 20601]
          Length = 155

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + +++ P+ EE+    V I+  +  KN  L++FV+R  G + + +C  +S+ +S
Sbjct: 2   SKVTDQVEAIVLPITEELGVELVDIAYEKEGKNWFLRVFVDRP-GGIDIDECAAVSEKLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D ++ I  +Y LEVSSPG +RP+ ++ DF    G  V          ++   G +  
Sbjct: 61  EKMDEQDPISENYFLEVSSPGAERPLKKEKDFENAVGKYVHVTSYEPIDSRKMWEGTLEA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +  + +      +    +  + +  ARL 
Sbjct: 121 YDGEYLTITVKDKTRTLTCK----VPKEKVAKARLA 152


>gi|153814922|ref|ZP_01967590.1| hypothetical protein RUMTOR_01137 [Ruminococcus torques ATCC 27756]
 gi|317500434|ref|ZP_07958658.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089559|ref|ZP_08338458.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847953|gb|EDK24871.1| hypothetical protein RUMTOR_01137 [Ruminococcus torques ATCC 27756]
 gi|316898189|gb|EFV20236.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330404927|gb|EGG84465.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 155

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +++P++  + F  V +  ++E     L+ ++++  G +T+ DCE +S+  S IL
Sbjct: 8   EQKTEELLEPIVSALGFELVDVEYVKEAGTWYLRAYIDKP-GGITVDDCEAVSRKFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I   Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++  G + G  E
Sbjct: 67  DEKDYIPDSYVFEVSSPGLGRPLKKEKDFKRSIGEEVEIRTYRAIDRQKEFTGILKGFDE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   E+  +  +IA+
Sbjct: 127 NTVTIIYEDETEQVFDRAEIAL 148


>gi|256830178|ref|YP_003158906.1| hypothetical protein Dbac_2411 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579354|gb|ACU90490.1| protein of unknown function DUF150 [Desulfomicrobium baculatum DSM
           4028]
          Length = 162

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 12/161 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL---EEKNLLLQIFVERDDGNMTLRDCEEL 72
                +   +  ++ P+ E        I LL     ++ +++++++     + + +C E+
Sbjct: 1   MDKNEIHARLMEMVTPLCEARDLEVWGIELLFAAGGRHKIVRVYLDS-QQGVGIDECSEV 59

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +S  LDVE+II G + LEVSSPG++RP       L + G  V   +      ++   
Sbjct: 60  SRHLSLALDVEDIIPGAFNLEVSSPGLERPFFSTEQMLPYVGQTVRIRLDNPLEGRKNFK 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G+++      F L  +             +++D +  A L+
Sbjct: 120 GRLLSIESPMFTLSDD--------STTFELNWDDVGKANLV 152


>gi|34496915|ref|NP_901130.1| hypothetical protein CV_1460 [Chromobacterium violaceum ATCC 12472]
 gi|51316759|sp|Q7NY15|RIMP_CHRVO RecName: Full=Ribosome maturation factor rimP
 gi|34102771|gb|AAQ59135.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 141

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 77/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +  + +  V   +        ++F+++  G +T+ DC  +S   + +  VE
Sbjct: 2   DVRLLLENTLPGLGYELVDFEMTPGGG--FRVFIDKP-GGITVEDCVLVSNHFTRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ +++DF+R++G +   +  +    ++K  G++ G  +   
Sbjct: 59  NV--DYERLEVSSPGLDRPLKKEADFVRFSGQLAKIKTRMPIEQQKKFTGRLAGVEDGSV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L+ + R         + I F ++  ARL
Sbjct: 117 KLDVDGRI--------VEIPFANIDKARL 137


>gi|217970107|ref|YP_002355341.1| hypothetical protein Tmz1t_1690 [Thauera sp. MZ1T]
 gi|217507434|gb|ACK54445.1| protein of unknown function DUF150 [Thauera sp. MZ1T]
          Length = 144

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 12/154 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  D+  +I+ V+  + +  V I     K  LL++F++  +  +T+ DC  +S  +  + 
Sbjct: 1   MRADVEGLIEQVVTGLGYELVDIEFSP-KGRLLRVFLD-IERGITVDDCATVSNQLQRVF 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VEN+   + RLEVSSPG+DRP+ + +DF R+ G      + L  G+++  +G I    +
Sbjct: 59  EVENV--DYDRLEVSSPGLDRPLKKLADFERFAGEQAQVRLSLPIGNQRNFVGVIERVQD 116

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               L  EK         ++ + FD +  ARL+ 
Sbjct: 117 GAVALRTEK--------GEVLLPFDDIEKARLVP 142


>gi|145637798|ref|ZP_01793447.1| hypothetical protein CGSHiHH_01594 [Haemophilus influenzae PittHH]
 gi|145268991|gb|EDK08945.1| hypothetical protein CGSHiHH_01594 [Haemophilus influenzae PittHH]
          Length = 151

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L           + +  + F ++  A ++
Sbjct: 123 KDMITLIV--------GDQEQILVFGNIQKANIV 148


>gi|327441014|dbj|BAK17379.1| uncharacterized protein [Solibacillus silvestris StLB046]
          Length = 161

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 5/158 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   I  ++ P++EE+    V I  ++E     L+I+V+  +G + +  C ++S+ +S
Sbjct: 2   SKVTSIIEELVTPIVEELDLELVDIEFVKEGRDWFLRIYVDTPEGGIDILQCAQVSERLS 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + IE +Y LEVSSPG +RP+ ++ DF +  G  +  +      D ++  G +  
Sbjct: 62  EKLDENDPIEQNYYLEVSSPGAERPLKKQQDFEKAIGKYIYVKTYEPVKDLKEFYGYLRA 121

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            ++    +E          ++ + I  + +  ARL + 
Sbjct: 122 YTDEFLEMEF----RIKTRKVTVQIEKEKIAQARLAID 155


>gi|251797401|ref|YP_003012132.1| hypothetical protein Pjdr2_3411 [Paenibacillus sp. JDR-2]
 gi|247545027|gb|ACT02046.1| protein of unknown function DUF150 [Paenibacillus sp. JDR-2]
          Length = 153

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQ 74
                +   + +++ P ++   F  V I  ++E +   L++FV++ +G + + +C ++S+
Sbjct: 1   MSTSKIKTVVEAMVTPFLDSNGFELVDIEYVKEGSNYFLRVFVDK-EGGIDIDECGKVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + +   Y LEVSSPG +RP+ +  D  +  G  V           ++  G+
Sbjct: 60  FLSEELDKNDPVSDAYFLEVSSPGAERPLKKPDDVRKAVGKHVYITTYEPIDGSKEFEGQ 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +         ++          + +  I +  + SARL 
Sbjct: 120 LTAFDGEQATVKI--------GKKEHVIPYAKVASARLA 150


>gi|53719534|ref|YP_108520.1| hypothetical protein BPSL1920 [Burkholderia pseudomallei K96243]
 gi|53724823|ref|YP_102762.1| hypothetical protein BMA1063 [Burkholderia mallei ATCC 23344]
 gi|67641343|ref|ZP_00440123.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|83720636|ref|YP_443083.1| hypothetical protein BTH_I2566 [Burkholderia thailandensis E264]
 gi|121601076|ref|YP_992839.1| hypothetical protein BMASAVP1_A1509 [Burkholderia mallei SAVP1]
 gi|124386071|ref|YP_001026182.1| hypothetical protein BMA10229_A0177 [Burkholderia mallei NCTC
           10229]
 gi|126439674|ref|YP_001058777.1| hypothetical protein BURPS668_1738 [Burkholderia pseudomallei 668]
 gi|126448900|ref|YP_001080548.1| hypothetical protein BMA10247_0989 [Burkholderia mallei NCTC 10247]
 gi|126452322|ref|YP_001066029.1| hypothetical protein BURPS1106A_1760 [Burkholderia pseudomallei
           1106a]
 gi|134282401|ref|ZP_01769106.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
 gi|167004350|ref|ZP_02270108.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
 gi|167562941|ref|ZP_02355857.1| hypothetical protein BoklE_10300 [Burkholderia oklahomensis EO147]
 gi|167582088|ref|ZP_02374962.1| hypothetical protein BthaT_28352 [Burkholderia thailandensis TXDOH]
 gi|167620249|ref|ZP_02388880.1| hypothetical protein BthaB_28340 [Burkholderia thailandensis Bt4]
 gi|167719820|ref|ZP_02403056.1| hypothetical protein BpseD_12440 [Burkholderia pseudomallei DM98]
 gi|167738821|ref|ZP_02411595.1| hypothetical protein Bpse14_12188 [Burkholderia pseudomallei 14]
 gi|167816042|ref|ZP_02447722.1| hypothetical protein Bpse9_12932 [Burkholderia pseudomallei 91]
 gi|167824418|ref|ZP_02455889.1| hypothetical protein Bpseu9_12158 [Burkholderia pseudomallei 9]
 gi|167836823|ref|ZP_02463706.1| hypothetical protein Bpse38_10070 [Burkholderia thailandensis
           MSMB43]
 gi|167845950|ref|ZP_02471458.1| hypothetical protein BpseB_11725 [Burkholderia pseudomallei B7210]
 gi|167894527|ref|ZP_02481929.1| hypothetical protein Bpse7_12319 [Burkholderia pseudomallei 7894]
 gi|167902932|ref|ZP_02490137.1| hypothetical protein BpseN_11790 [Burkholderia pseudomallei NCTC
           13177]
 gi|167919192|ref|ZP_02506283.1| hypothetical protein BpseBC_11610 [Burkholderia pseudomallei
           BCC215]
 gi|217423492|ref|ZP_03454993.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|226199708|ref|ZP_03795261.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|237812040|ref|YP_002896491.1| hypothetical protein GBP346_A1782 [Burkholderia pseudomallei
           MSHR346]
 gi|242317839|ref|ZP_04816855.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|254178698|ref|ZP_04885353.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|254179982|ref|ZP_04886581.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|254188606|ref|ZP_04895117.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254197760|ref|ZP_04904182.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
 gi|254199710|ref|ZP_04906076.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|254206032|ref|ZP_04912384.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|254297817|ref|ZP_04965270.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
 gi|254358406|ref|ZP_04974679.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|257139312|ref|ZP_05587574.1| hypothetical protein BthaA_08929 [Burkholderia thailandensis E264]
 gi|81379645|sp|Q63TP6|RIMP_BURPS RecName: Full=Ribosome maturation factor rimP
 gi|81605125|sp|Q62KK7|RIMP_BURMA RecName: Full=Ribosome maturation factor rimP
 gi|123536573|sp|Q2SVG6|RIMP_BURTA RecName: Full=Ribosome maturation factor rimP
 gi|166980214|sp|A3N8V6|RIMP_BURP6 RecName: Full=Ribosome maturation factor rimP
 gi|166980223|sp|A3NUK8|RIMP_BURP0 RecName: Full=Ribosome maturation factor rimP
 gi|166987486|sp|A2S2L3|RIMP_BURM9 RecName: Full=Ribosome maturation factor rimP
 gi|166990761|sp|A1V3N6|RIMP_BURMS RecName: Full=Ribosome maturation factor rimP
 gi|166990846|sp|A3MJW2|RIMP_BURM7 RecName: Full=Ribosome maturation factor rimP
 gi|52209948|emb|CAH35920.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52428246|gb|AAU48839.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
 gi|83654461|gb|ABC38524.1| Uncharacterized BCR, YhbC family COG0779 superfamily [Burkholderia
           thailandensis E264]
 gi|121229886|gb|ABM52404.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|124294091|gb|ABN03360.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
 gi|126219167|gb|ABN82673.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
 gi|126225964|gb|ABN89504.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
 gi|126241770|gb|ABO04863.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
 gi|134246439|gb|EBA46528.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
 gi|147749306|gb|EDK56380.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|147753475|gb|EDK60540.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|148027533|gb|EDK85554.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|157806885|gb|EDO84055.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
 gi|157936285|gb|EDO91955.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|160699737|gb|EDP89707.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|169654501|gb|EDS87194.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
 gi|184210522|gb|EDU07565.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|217393350|gb|EEC33371.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|225928294|gb|EEH24328.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|237503609|gb|ACQ95927.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
 gi|238522260|gb|EEP85705.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|242141078|gb|EES27480.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|243060318|gb|EES42504.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
          Length = 153

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        ++ +++++    +T+ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MVCVYIDQP-AGITIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE E    K      +  +   +  ARLI 
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLIP 144


>gi|167570130|ref|ZP_02363004.1| hypothetical protein BoklC_09816 [Burkholderia oklahomensis C6786]
          Length = 153

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        ++ +++++    +T+ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MVCVYIDQP-AGITIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILYAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE E    K      +  +   +  ARLI 
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADIDKARLIP 144


>gi|302389799|ref|YP_003825620.1| protein of unknown function DUF150 [Thermosediminibacter oceani DSM
           16646]
 gi|302200427|gb|ADL07997.1| protein of unknown function DUF150 [Thermosediminibacter oceani DSM
           16646]
          Length = 162

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 10/160 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  + + VI +  F  V +  ++E  +  L+ ++++  G +TL DC+E+S+
Sbjct: 1   MQKSQILKKVWDIGERVIHDRGFELVDVEFVQEAGSWYLRYYIDKP-GGITLDDCQEVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS  LD+E+ I   Y LEVSSPG++RP+ ++ DFL++ G  V  ++      K+   G 
Sbjct: 60  EISRRLDIEDPIPHSYILEVSSPGVERPLKKEKDFLKYIGSEVEIKVFEPIAGKKAFTGT 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++   +    L  +           I I  + + SA+L  
Sbjct: 120 LIDYKDGSVVLRVD--------SSIINIPHEKISSAKLKF 151


>gi|268601717|ref|ZP_06135884.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|291043425|ref|ZP_06569146.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|268585848|gb|EEZ50524.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|291012661|gb|EFE04646.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 149

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +      L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 8   DIQTILEKTLPGLGYELADFELAAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 64

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G      
Sbjct: 65  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCENDTV 122

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 123 TVSFDGK--------TVQIELGNIDKARL 143


>gi|167625061|ref|YP_001675355.1| hypothetical protein Shal_3149 [Shewanella halifaxensis HAW-EB4]
 gi|189039835|sp|B0TQA4|RIMP_SHEHH RecName: Full=Ribosome maturation factor rimP
 gi|167355083|gb|ABZ77696.1| protein of unknown function DUF150 [Shewanella halifaxensis
           HAW-EB4]
          Length = 151

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +++  +E +  +   +  +   K+ +L+++++  +  + + DC E S+ +S +
Sbjct: 4   LERKLVEMLKAPVEALGHQLWGLEYIQAGKHSILRLYIDN-EKGIFIEDCAEASRQVSAV 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG++R +     +  + G  V  ++ +     + L G + G  
Sbjct: 63  LDVEDPITSEYTLEVSSPGVERLLFTAEQYKAYIGETVKVQLTMPVAGSRNLKGTVTGVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L  +          ++ ++ D++    LI
Sbjct: 123 GQMLNLSVDG--------NELIVALDNIRKGNLI 148


>gi|312869023|ref|ZP_07729200.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
 gi|311095449|gb|EFQ53716.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
          Length = 157

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 8/156 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++ P+++E  F    I  ++  K+  L++++++ DG +TL DC  +S  +S  
Sbjct: 4   VTETVTDLVTPILDEHHFYLYDIEFVKEGKSWYLRVYIDK-DGGITLDDCATVSDQLSEA 62

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    + I   Y LEVSSPG +RP+  ++D+ R   H +   +      K+   G +M 
Sbjct: 63  LDNVEPDPIPQAYFLEVSSPGAERPLKNEADYQRAVNHYIHVSLYQQIAGKKVYEGTLME 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            S+    L+   +        Q+ I    +  ARL 
Sbjct: 123 LSDKEMTLDFMDK----TRHRQVVIDRSKVAKARLA 154


>gi|323697470|ref|ZP_08109382.1| protein of unknown function DUF150 [Desulfovibrio sp. ND132]
 gi|323457402|gb|EGB13267.1| protein of unknown function DUF150 [Desulfovibrio desulfuricans
           ND132]
          Length = 152

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 70/153 (45%), Gaps = 10/153 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +S +I+P +E + +    ++     K  +++I+++   G + +  C E+S+ +  +L
Sbjct: 6   EEMLSDMIRPEVENLGYVFWGLASPSSGKKRVVRIYIDAP-GGVNIDQCAEVSRQVGLML 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VE++I G + LEVSSPG++RP    +    + G  V   +      ++K  G++ G   
Sbjct: 65  EVEDVIPGAFVLEVSSPGLERPFFAPAQLADYVGRKVDVLLFEPLDGRRKFKGELTGVEG 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +  +           +   + ++    L+
Sbjct: 125 DTVTVNVDD--------QTMNFDWTAIKKITLV 149


>gi|88812962|ref|ZP_01128205.1| hypothetical protein NB231_03777 [Nitrococcus mobilis Nb-231]
 gi|88789740|gb|EAR20864.1| hypothetical protein NB231_03777 [Nitrococcus mobilis Nb-231]
          Length = 150

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 82/153 (53%), Gaps = 10/153 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++ V++PV+  M +  V I     K+  LL+I++++ D  +++ DC  +S  IS +LD
Sbjct: 5   DTLTKVVEPVVAAMGYELVGIEYRPSKSQALLRIYIDKAD-GISVEDCALVSNQISGVLD 63

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE+ + G Y LEVSSPG+ RP+ + SD+ R+ G +V   I  +   ++++ G + G    
Sbjct: 64  VEDPLSGRYTLEVSSPGLRRPIFKASDYERFAGELVHIRIRGTLDGRRRIHGLLRGLRAD 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +          N ++I++  + +  A L +
Sbjct: 124 CVIV--------VENGIEISVPLNRVDKANLEL 148


>gi|332981611|ref|YP_004463052.1| hypothetical protein Mahau_1032 [Mahella australiensis 50-1 BON]
 gi|332699289|gb|AEE96230.1| protein of unknown function DUF150 [Mahella australiensis 50-1 BON]
          Length = 154

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 2/148 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                +A  +  ++ P++E+  F  V I   +E     L+IF+++ D  +T+ DCE +S+
Sbjct: 1   MAKAKVADTVRQLVMPILEDNGFELVDIEFKKEGAEQYLRIFIDKPD-GITIDDCELVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + I   Y LEVSSPGIDRP+  + DF R  G  V  ++   S   +   G 
Sbjct: 60  HLSDKLDEIDPIPQAYILEVSSPGIDRPLKTQRDFERSMGKQVEIKLYKQSMGHKTYKGT 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAI 162
           ++G  +    +E             IA+
Sbjct: 120 LVGFDDERVEIETVDNQHLSFGIKDIAL 147


>gi|145630837|ref|ZP_01786615.1| hypothetical protein CGSHi22421_10572 [Haemophilus influenzae
           R3021]
 gi|144983719|gb|EDJ91179.1| hypothetical protein CGSHi22421_10572 [Haemophilus influenzae
           R3021]
          Length = 151

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRVGRFITVRLFIDK-DGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +  +        F ++  A ++
Sbjct: 123 KDMITLIVDDQEQILV--------FGNIQKANVV 148


>gi|84624710|ref|YP_452082.1| hypothetical protein XOO_3053 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|161898973|ref|YP_201860.2| hypothetical protein XOO3221 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|91208349|sp|Q5GXU6|RIMP_XANOR RecName: Full=Ribosome maturation factor rimP
 gi|91208413|sp|Q2P0W9|RIMP_XANOM RecName: Full=Ribosome maturation factor rimP
 gi|259645271|sp|B2SVK5|RIMP_XANOP RecName: Full=Ribosome maturation factor rimP
 gi|84368650|dbj|BAE69808.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 196

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 12/160 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQA 75
           A +I++++ P ++ +    + +  L       L+++++     + +  + + DCE +S+ 
Sbjct: 5   ATEIANLLSPTVDSLGVELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSRE 64

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDVE+ I GHY LEVSSPG+DRP+     F R  G      + L+   +++  G+I
Sbjct: 65  VSAQLDVEDPISGHYTLEVSSPGVDRPLFTLEQFARHAGESTKIVLKLAQDGRRRFQGEI 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +                  ++   + I FD++  AR++  
Sbjct: 125 LRIDAEA------GAVVFAIDGKDVQIGFDNIDKARILPD 158


>gi|69246861|ref|ZP_00604153.1| Protein of unknown function DUF150 [Enterococcus faecium DO]
 gi|257878527|ref|ZP_05658180.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257882945|ref|ZP_05662598.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257884341|ref|ZP_05663994.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257889276|ref|ZP_05668929.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257894714|ref|ZP_05674367.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|258615948|ref|ZP_05713718.1| hypothetical protein EfaeD_09568 [Enterococcus faecium DO]
 gi|260560112|ref|ZP_05832290.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|261207400|ref|ZP_05922086.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289566678|ref|ZP_06447095.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|293556648|ref|ZP_06675213.1| hypothetical protein EfmE1039_1955 [Enterococcus faecium E1039]
 gi|293560201|ref|ZP_06676703.1| hypothetical protein EfmE1162_0858 [Enterococcus faecium E1162]
 gi|293567722|ref|ZP_06679064.1| hypothetical protein EfmE1071_0525 [Enterococcus faecium E1071]
 gi|294613938|ref|ZP_06693873.1| hypothetical protein EfmE1636_0063 [Enterococcus faecium E1636]
 gi|294618724|ref|ZP_06698256.1| hypothetical protein EfmE1679_1593 [Enterococcus faecium E1679]
 gi|294620762|ref|ZP_06699969.1| hypothetical protein EfmU0317_0176 [Enterococcus faecium U0317]
 gi|68195042|gb|EAN09505.1| Protein of unknown function DUF150 [Enterococcus faecium DO]
 gi|257812755|gb|EEV41513.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257818603|gb|EEV45931.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257820179|gb|EEV47327.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257825636|gb|EEV52262.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257831093|gb|EEV57700.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|260073947|gb|EEW62271.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|260078291|gb|EEW65996.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289161537|gb|EFD09420.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291589565|gb|EFF21371.1| hypothetical protein EfmE1071_0525 [Enterococcus faecium E1071]
 gi|291593213|gb|EFF24787.1| hypothetical protein EfmE1636_0063 [Enterococcus faecium E1636]
 gi|291595037|gb|EFF26382.1| hypothetical protein EfmE1679_1593 [Enterococcus faecium E1679]
 gi|291599742|gb|EFF30752.1| hypothetical protein EfmU0317_0176 [Enterococcus faecium U0317]
 gi|291601183|gb|EFF31470.1| hypothetical protein EfmE1039_1955 [Enterococcus faecium E1039]
 gi|291605873|gb|EFF35305.1| hypothetical protein EfmE1162_0858 [Enterococcus faecium E1162]
          Length = 157

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 77/158 (48%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P+++E +F  V++  ++  K+  L++F+++ +G + + +C  +S+ +S
Sbjct: 2   SSVVETVTEMVTPILDEQNFELVEVEFVKEGKSWFLRVFIDK-EGGIDIEECAFVSEKLS 60

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+ ++SD+ +  G  V   +      +++  G +
Sbjct: 61  EKLDAADPDPIPQAYFLEVSSPGAERPLKKESDYEKALGDYVHVSLYQPVDGEKQYEGFL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    L+          E ++     ++  ARL 
Sbjct: 121 QSFDAEQLTLKI----RIKTREKELTFDRKNIAKARLA 154


>gi|315658445|ref|ZP_07911317.1| protein of hypothetical function DUF150 [Staphylococcus lugdunensis
           M23590]
 gi|315496774|gb|EFU85097.1| protein of hypothetical function DUF150 [Staphylococcus lugdunensis
           M23590]
          Length = 155

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 85/154 (55%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +  ++ ++IQPV+E +++  V++  ++  K+  L++ +++ +G + L DC   S+ IS
Sbjct: 2   SKITEEVETLIQPVLEALNYELVEVEFVKEGKDHFLRVSIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++D  + I+  Y L+V+SPG +RP+ ++ D+ R     +   +     + ++ +G ++ 
Sbjct: 61  EVMDEHDPIKEMYYLDVASPGAERPIKKEQDYQRAIQQPIFVSLYAPIENNKEWLGILVE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            +     +E +++ +K     QI+I  + +  AR
Sbjct: 121 VTAETITMEVKEKAKKK----QISIPRNKIAKAR 150


>gi|17546006|ref|NP_519408.1| hypothetical protein RSc1287 [Ralstonia solanacearum GMI1000]
 gi|34222937|sp|Q8XZV8|RIMP_RALSO RecName: Full=Ribosome maturation factor rimP
 gi|17428301|emb|CAD14989.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000]
          Length = 162

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 4/151 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  M +  V++        LL++++++ +  + + DCE++S  ++ + +VE
Sbjct: 2   HLTDLIEKTLTAMGYELVEVERAPAG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+    DF R+ G      + L    ++   G +   +    
Sbjct: 60  NV--NYERLEVSSPGLDRPLRTLVDFARFAGLEAKVTLRLPVNGQKNFTGIVQAPAGEPG 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   E       +  +   L  ARL+ 
Sbjct: 118 QERIGLEFEGKDGPALLEFTLSELDRARLVP 148


>gi|30248763|ref|NP_840833.1| hypothetical protein NE0759 [Nitrosomonas europaea ATCC 19718]
 gi|34222818|sp|Q82WD1|RIMP_NITEU RecName: Full=Ribosome maturation factor rimP
 gi|30180358|emb|CAD84670.1| DUF150 [Nitrosomonas europaea ATCC 19718]
          Length = 143

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/150 (29%), Positives = 81/150 (54%), Gaps = 11/150 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++P I  M +  V I        LL++F+++ +G++TL DC  +S  +S +L VEN
Sbjct: 3   LFELLEPTIAGMGYELVDIEQSAPGR-LLRVFIDKKEGSITLDDCVAISNHLSQLLAVEN 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           I   + RLEVSSPG+DRP+ +K+DF+R+ G      + ++   ++  +G ++  ++    
Sbjct: 62  I--DYNRLEVSSPGLDRPLKKKADFVRYMGESARIRLRIALQGQRNFVGTLVEVNDDVLT 119

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           L  + +         + I   +L  ARLI 
Sbjct: 120 LNADGKL--------LQIELRNLEKARLIP 141


>gi|294670567|ref|ZP_06735446.1| hypothetical protein NEIELOOT_02289 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307692|gb|EFE48935.1| hypothetical protein NEIELOOT_02289 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 143

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI  ++   +  + +  V   L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQQILDKTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLSRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++   +  LE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 59  DV--DYKNLEISSPGLDRPLKKTADFVRFAGQQAKIKTRLPIDGQKNFIGRIEACENDIV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L  + +          +I  +++  ARL
Sbjct: 117 TLSFDGK--------TASIEINNIDKARL 137


>gi|237748746|ref|ZP_04579226.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229380108|gb|EEO30199.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 162

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-RDDG----NMTLRDCEELSQAISPI 79
           +  +I+  +    +  V +   +    LL+++++ + +     N++L DCE++S+ +S +
Sbjct: 2   LQELIEKTVSGCGYDLVDVERAQGN--LLRVYIDFKPEDAGRGNISLEDCEKVSRQLSHV 59

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIGKIM 136
           L VE++   + RLEVSSPG+DRP+ + +DF+R+ G     ++         ++   G ++
Sbjct: 60  LMVEDV--DYDRLEVSSPGLDRPLKKFADFVRFVGMEAHVKLRKPVTGMSNRKTFQGILL 117

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   LE E + E + + L   I    +  A L+ 
Sbjct: 118 APEGDELALEFEGKDENNNSVLHFTI--ADIDKAHLVP 153


>gi|332532409|ref|ZP_08408287.1| NusA-like protein [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038052|gb|EGI74499.1| NusA-like protein [Pseudoalteromonas haloplanktis ANT/505]
          Length = 151

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L  D+ +++ P +E + F    +  +   ++  L++++  +D  +++ +C + S+ IS
Sbjct: 2   TKLEQDLVTMLTPAVEMLGFELHGLEFVQAGRHSTLRVYIAHED-GISVDNCADASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I   Y LEVSSPG+DR + ++  + +  G  V     L    ++   G ++ 
Sbjct: 61  AILDVEDPITNEYDLEVSSPGVDRLLFKQDHYEQAQGEEVRVRTKLPQDGRRNFKGDLVA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            S     L  +          +  I   ++  A LI
Sbjct: 121 VSSDMITLSSDG--------AEHLIMLSNIERANLI 148


>gi|291523275|emb|CBK81568.1| Uncharacterized protein conserved in bacteria [Coprococcus catus
           GD/7]
          Length = 154

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                      +++ P++E   F  V +  ++   N  L+ ++++ +  +T+ DCEE+S+
Sbjct: 1   MAKKDYESRTEAMLMPIVEAKGFELVDVEWVKEGANWYLRAYIDK-ENGITVDDCEEVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD E+ I  +Y LEVSSPG+DRP+ ++ DF R  G  V  ++  +   +++ +G 
Sbjct: 60  ALSDLLDEEDFISENYILEVSSPGLDRPLKKEKDFARSIGKDVEVKLFKAINKEKEFVGI 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    E    LE E        E ++      +   RL  
Sbjct: 120 LKAYDEDTVTLEMED-------ETEMQFKRSDIARIRLAF 152


>gi|15836838|ref|NP_297526.1| hypothetical protein XF0233 [Xylella fastidiosa 9a5c]
 gi|9105044|gb|AAF83046.1|AE003877_1 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 215

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 14/166 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDC 69
             D G+   I +++ P +E + F  +    L      +L+++++     + +  +++ DC
Sbjct: 17  VSDKGIE--IVNLLAPKVETLGFELLGAEYLLVPSGAILRLYIDTPFAMQPECMVSIDDC 74

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E +S+ +S  LDVE  I G+Y LEVSSPG+DR +     F R     V   + L     +
Sbjct: 75  ERVSREVSAYLDVEEPISGNYTLEVSSPGLDRRLFTLEQFARHYNQFVKVGLKLPQHGSR 134

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +L GKI+         + +      +N +++A+ F+++  AR++  
Sbjct: 135 RLQGKIVRVE------QVDGFVVLLVNGVELAVDFNNIDKARIVPD 174


>gi|187923622|ref|YP_001895264.1| hypothetical protein Bphyt_1630 [Burkholderia phytofirmans PsJN]
 gi|226736380|sp|B2T379|RIMP_BURPP RecName: Full=Ribosome maturation factor rimP
 gi|187714816|gb|ACD16040.1| protein of unknown function DUF150 [Burkholderia phytofirmans PsJN]
          Length = 152

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++    + + DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVVGLGYELVDLERTGRG--MLCIYIDQP-AGIAIEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V   +      ++   G +        
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVVITLKKPLDGRKSYRGILHAPQGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE E +         +  +   +  ARL+ 
Sbjct: 117 GLEFEGKE----GAAMLDFTLADIDKARLVP 143


>gi|259585824|sp|A8ZZ67|RIMP_DESOH RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 11/159 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER--DDGNMTLRDCEELSQAIS 77
           +   +  +++PV        V +   +E    +L++++     D  +TL DC  +S+ ++
Sbjct: 7   VVAQMWKLVEPVCSAEGMELVFVEFNKESQGRVLRLYLASGVPDRGVTLEDCAGISRQVN 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDV      +Y LEVSS G++RP+ ++ DF R+ G  V         D++   G ++G
Sbjct: 67  GLLDVYLPELDNYTLEVSSAGLERPLAKEIDFERFAGSRVKIRTAAPVSDRKNFTGILLG 126

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
            S+    L  + +           I +  +  A+L+  D
Sbjct: 127 VSDGNVRLMVDDK--------TFVIPYGEITRAKLVNED 157


>gi|70726650|ref|YP_253564.1| hypothetical protein SH1649 [Staphylococcus haemolyticus JCSC1435]
 gi|82582359|sp|Q4L5W7|RIMP_STAHJ RecName: Full=Ribosome maturation factor rimP
 gi|68447374|dbj|BAE04958.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 155

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +  ++ ++I P+++E++F  V++   +  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKITEEVETIITPILDELNFELVEVEYTKEGKDHFLRISIDK-EGGVNLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I   Y L+V+SPG +RP+ ++ D+       V   +       ++ +G +  
Sbjct: 61  EAMDENDPIPDMYYLDVASPGAERPIKKEKDYHNAIDKPVFVSLYAPIEGDKEWLGILKA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             +    +E +++ +      QI I  + +  AR
Sbjct: 121 VDDDTITMEVKEKAKTK----QIEIPRNKIAKAR 150


>gi|237746614|ref|ZP_04577094.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229377965|gb|EEO28056.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 182

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAI 76
              +  +++  +    +  V +        +L+++++        GN+T+ DCE++S+ +
Sbjct: 19  QALLQELVEKTVNGCGYDLVDLERASGG--ILRVYIDFLPEASSRGNITVDDCEKVSRQL 76

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIG 133
           S +L VE++   + RLEVSSPG+DRP+ +  DF+R+ G      +         ++   G
Sbjct: 77  SHVLTVEDV--DYDRLEVSSPGLDRPLKKWQDFVRFAGMEAHVRLRKPVTGMGNRKSFQG 134

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++        LE E    +  + L   I    +  ARL+ 
Sbjct: 135 ILLPPEGDELALEFEGNDSESSSVLHFTI--TDIDKARLVP 173


>gi|210612464|ref|ZP_03289322.1| hypothetical protein CLONEX_01523 [Clostridium nexile DSM 1787]
 gi|210151572|gb|EEA82579.1| hypothetical protein CLONEX_01523 [Clostridium nexile DSM 1787]
          Length = 169

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++E   F  V +  ++   N  L+ ++++  G +++ DCE +S+A S IL
Sbjct: 22  EQKTEELLLPIVESNGFELVDVEYVKEGGNWYLRAYIDKP-GGISVDDCEVVSRAFSDIL 80

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++ IG +    +
Sbjct: 81  DEKDYIEDTYIFEVSSPGLGRPLKKEKDFARSIGEEVEIRTYRAIDRQKEFIGILKEYDQ 140

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    K     +IA+
Sbjct: 141 DTVTIEYEDETTKTFERSEIAL 162


>gi|119898400|ref|YP_933613.1| hypothetical protein azo2109 [Azoarcus sp. BH72]
 gi|259585699|sp|A1K7C1|RIMP_AZOSB RecName: Full=Ribosome maturation factor rimP
 gi|119670813|emb|CAL94726.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 144

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 82/154 (53%), Gaps = 12/154 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   + ++++ V+  + +  V   L   K  LL++F++  +  +T+ DC  +S  ++ + 
Sbjct: 1   MQAGVENLVEQVVSGLGYELVDFELSP-KGRLLRVFID-IERGVTVDDCATVSNQLTRVF 58

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VEN+   + RLEVSSPG+DRP+ + +DF R+ G  +   + L  G+++  +G + G  E
Sbjct: 59  EVENV--DYDRLEVSSPGLDRPLKKLADFERFAGQEIQLRLSLPIGNQRNFVGVLQGVRE 116

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   L  EK         ++   F+ +  ARL+ 
Sbjct: 117 SSVVLLTEK--------GELLAPFEEIEKARLVP 142


>gi|255284073|ref|ZP_05348628.1| hypothetical protein BRYFOR_09459 [Bryantella formatexigens DSM
           14469]
 gi|255265418|gb|EET58623.1| hypothetical protein BRYFOR_09459 [Bryantella formatexigens DSM
           14469]
          Length = 201

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 9/163 (5%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEEL 72
           R+           +++QP+++   F  V +  ++   +  L+ ++++  G +T+ DCE +
Sbjct: 46  RMTKREMYEQKTEAILQPIVDANGFELVDVEYVKEGGSWYLRAYIDKP-GGITVDDCELV 104

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+A + ILD ++ +E  Y  EVSSPG+ RP+ ++ DF+R  G  V      +   +++  
Sbjct: 105 SRAANDILDEQDFVEESYIFEVSSPGLGRPLKKEKDFVRSIGEEVEIRTFRAIEKQKEFY 164

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           G +    +    +  E        E ++ I+   +   RL   
Sbjct: 165 GILKAFDKESVTIVLED-------ESEMQIARADIALIRLAFD 200


>gi|227551757|ref|ZP_03981806.1| protein of hypothetical function DUF150 [Enterococcus faecium
           TX1330]
 gi|257887082|ref|ZP_05666735.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257895647|ref|ZP_05675300.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|257898237|ref|ZP_05677890.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|293377742|ref|ZP_06623931.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
 gi|293570614|ref|ZP_06681665.1| hypothetical protein EfmE980_0412 [Enterococcus faecium E980]
 gi|227179062|gb|EEI60034.1| protein of hypothetical function DUF150 [Enterococcus faecium
           TX1330]
 gi|257823136|gb|EEV50068.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257832212|gb|EEV58633.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|257836149|gb|EEV61223.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|291609285|gb|EFF38556.1| hypothetical protein EfmE980_0412 [Enterococcus faecium E980]
 gi|292643742|gb|EFF61863.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
          Length = 157

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P+++E  F  V++  ++  K+  L++F+++ +G + + +C  +S+ +S
Sbjct: 2   SSVVETVTEMVTPILDEQHFELVEVEFVKEGKSWFLRVFIDK-EGGIDIEECAFVSEKLS 60

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+ ++SD+ +  G  V   +      +++  G +
Sbjct: 61  EKLDAADPDPIPQAYFLEVSSPGAERPLKKESDYEKALGDYVHVSLYQPVDGEKQYEGFL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    L+          E ++     ++  ARL 
Sbjct: 121 QSFDAEQLTLKI----RIKTREKELTFDRKNIAKARLA 154


>gi|240116050|ref|ZP_04730112.1| hypothetical protein NgonPID1_07356 [Neisseria gonorrhoeae PID18]
 gi|260440136|ref|ZP_05793952.1| hypothetical protein NgonDG_03444 [Neisseria gonorrhoeae DGI2]
          Length = 143

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI ++++  +  + +      L  +    L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILEKTLPGLGYELADFELAAQG--TLRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I  G+  LE+SSPG+DRP+ + +DF+R+ G     +  L  G ++  IGKI G      
Sbjct: 59  DI--GYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQKNFIGKIEGCENDTV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +         + I   ++  ARL
Sbjct: 117 TVSFDGK--------TVQIELGNIDKARL 137


>gi|76809648|ref|YP_333312.1| hypothetical protein BURPS1710b_1913 [Burkholderia pseudomallei
           1710b]
 gi|167911168|ref|ZP_02498259.1| hypothetical protein Bpse112_11783 [Burkholderia pseudomallei 112]
 gi|254259962|ref|ZP_04951016.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
 gi|91208395|sp|Q3JSZ1|RIMP_BURP1 RecName: Full=Ribosome maturation factor rimP
 gi|76579101|gb|ABA48576.1| conserved hypothetical protein [Burkholderia pseudomallei 1710b]
 gi|254218651|gb|EET08035.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
          Length = 153

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        ++ +++++    +T+ DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVTGLGYELVDLERTGRG--MVCVYIDQP-AGITIDDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +   +    
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE E    K      +  +   +  ARLI 
Sbjct: 117 GLEFE---RKKGEAAMLDFTLADVDKARLIP 144


>gi|289550943|ref|YP_003471847.1| hypothetical protein SLGD_01629 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180475|gb|ADC87720.1| hypothetical protein SLGD_01629 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 155

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 85/154 (55%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +  ++ ++IQPV+E +++  V++  ++  K+  L++ +++ +G + L DC   S+ IS
Sbjct: 2   SKITEEVETLIQPVLEALNYELVEVEFVKEGKDHFLRVSIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ++D  + I+  Y L+V+SPG +RP+ ++ D+ +     +   +     + ++ +G ++ 
Sbjct: 61  EVMDEHDPIKEMYYLDVASPGAERPIKKEQDYQKAIQQPIFVSLYAPIENNKEWLGILVE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            +     +E +++ +K     QI+I  + +  AR
Sbjct: 121 VTAETITMEVKEKAKKK----QISIPRNKIAKAR 150


>gi|125973510|ref|YP_001037420.1| hypothetical protein Cthe_0995 [Clostridium thermocellum ATCC
           27405]
 gi|256003328|ref|ZP_05428319.1| protein of unknown function DUF150 [Clostridium thermocellum DSM
           2360]
 gi|281417713|ref|ZP_06248733.1| protein of unknown function DUF150 [Clostridium thermocellum JW20]
 gi|259585742|sp|A3DE48|RIMP_CLOTH RecName: Full=Ribosome maturation factor rimP
 gi|125713735|gb|ABN52227.1| protein of unknown function DUF150 [Clostridium thermocellum ATCC
           27405]
 gi|255992618|gb|EEU02709.1| protein of unknown function DUF150 [Clostridium thermocellum DSM
           2360]
 gi|281409115|gb|EFB39373.1| protein of unknown function DUF150 [Clostridium thermocellum JW20]
 gi|316940251|gb|ADU74285.1| protein of unknown function DUF150 [Clostridium thermocellum DSM
           1313]
          Length = 154

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 81/148 (54%), Gaps = 2/148 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++ +  PV+ + SF  V +  ++   +  L+I++++  G +T+ DC+ +S+
Sbjct: 1   MTRKEIEEIVTEIANPVVNKHSFELVDVEFIKEGSSWYLRIYIDKP-GGITIDDCQVVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS ILD E+ I   Y LEVSSPG+DRP+ ++SDF R+ G +V  ++      K+   G+
Sbjct: 60  EISDILDKEDPIPHSYFLEVSSPGLDRPLKKESDFERFKGELVEVKVFKPIEGKKIFEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAI 162
           ++G  +    ++K      +    ++A+
Sbjct: 120 LVGYKDNKIIIKKNGNELMEFERDKVAL 147


>gi|294085150|ref|YP_003551910.1| hypothetical protein SAR116_1583 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664725|gb|ADE39826.1| hypothetical protein SAR116_1583 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 177

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 10/161 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK--NLLLQIFVER-DDGNMTLRDCEELSQAIS 77
           +   +S +I+  +E++ F+ V++  +        LQI  E  +D  MT+ DC++LS+ I+
Sbjct: 13  VETKVSKIIEAAVEDLGFQLVRVLFMGGNSGRNQLQIMAEPVEDREMTVEDCKKLSRHIA 72

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I   Y LEVSSPGIDRP+ +  D+ R+ G +    + +    +++  G++ G
Sbjct: 73  ALLDVEDPISSAYVLEVSSPGIDRPLTKIEDYERFEGELAKINLRMMRDGRRRFNGRLNG 132

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDEL 178
             +       E +   +    + A +FD + SAR+   + L
Sbjct: 133 FDD-------EGKIVLETTFGRFAFAFDEIDSARIDPAEIL 166


>gi|68250160|ref|YP_249272.1| hypothetical protein NTHI1846 [Haemophilus influenzae 86-028NP]
 gi|145629345|ref|ZP_01785144.1| hypothetical protein CGSHi22121_11095 [Haemophilus influenzae
           22.1-21]
 gi|145641319|ref|ZP_01796898.1| hypothetical protein CGSHiR3021_04472 [Haemophilus influenzae
           R3021]
 gi|81335416|sp|Q4QK35|RIMP_HAEI8 RecName: Full=Ribosome maturation factor rimP
 gi|68058359|gb|AAX88612.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|144978848|gb|EDJ88571.1| hypothetical protein CGSHi22121_11095 [Haemophilus influenzae
           22.1-21]
 gi|145273862|gb|EDK13729.1| hypothetical protein CGSHiR3021_04472 [Haemophilus influenzae
           22.4-21]
 gi|301170016|emb|CBW29620.1| conserved protein [Haemophilus influenzae 10810]
          Length = 151

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  ++++      I        + +++F+++ +G +T+ DC ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVKDLGCELWGIECQRVGRFMTVRLFIDK-EGGVTVDDCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +  +        F ++  A ++
Sbjct: 123 KDMITLIVDDQEQILV--------FGNIQKANVV 148


>gi|145638848|ref|ZP_01794456.1| hypothetical protein CGSHiII_01640 [Haemophilus influenzae PittII]
 gi|145271820|gb|EDK11729.1| hypothetical protein CGSHiII_01640 [Haemophilus influenzae PittII]
 gi|309750829|gb|ADO80813.1| 30S ribosomal maturation protein RimP [Haemophilus influenzae
           R2866]
          Length = 151

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  ++  ++Q  +E++      I        + +++F+++ +G +T+ +C ++S+ +S I
Sbjct: 4   LEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDK-EGGVTVDNCADVSRQVSAI 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE+ I   Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    
Sbjct: 63  LDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIE 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +    L  + + +  +        F ++  A ++
Sbjct: 123 KDMITLIVDDQEQILV--------FGNIQKANVV 148


>gi|300854497|ref|YP_003779481.1| hypothetical protein CLJU_c13110 [Clostridium ljungdahlii DSM
           13528]
 gi|300434612|gb|ADK14379.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 154

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 83/158 (52%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                    +S++IQP++  +++    +   +   N  L+I++++ +GN++L DCE +S+
Sbjct: 1   MTKNTFMERMSALIQPIVNNLNYELYYLEFKKEGNNNYLRIYIDKKEGNISLEDCESVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD E+ I+  Y LEVSSPG++R +  +    R+ G+ V   I      K+K  G+
Sbjct: 61  AVSDMLDKEDPIKDPYYLEVSSPGVERKLYTEEHLKRYIGYSVQVNISGLLKGKKKYEGE 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +     ++ E        E  IAI  D +L+  L
Sbjct: 121 LLDFNSNELKIKCE--------EEDIAIPRDKILNVNL 150


>gi|87200506|ref|YP_497763.1| hypothetical protein Saro_2493 [Novosphingobium aromaticivorans DSM
           12444]
 gi|123488750|sp|Q2G5E4|RIMP_NOVAD RecName: Full=Ribosome maturation factor rimP
 gi|87136187|gb|ABD26929.1| protein of unknown function DUF150 [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 186

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 19/183 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-----LLQIFVERDDGN-MTLRDCEELSQAI 76
             I  V++P  + + F  V++   +   +      LQI  ER D   + + DC  LS+ +
Sbjct: 5   ARIIEVVEPEAKALGFDLVRVRYFKGGEIGDEEHTLQIMAERPDTGQLVIEDCAALSRRV 64

Query: 77  SPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           S   D      + +IE  YRLEVSSPGIDRP+ R  DF  W GH    E+     ++++ 
Sbjct: 65  SDRFDELEEAGDVLIEDAYRLEVSSPGIDRPLTRAKDFAAWIGHEARVELSELLDNRKRF 124

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS--LNNYGSY 189
            G++ G       +  E  G          + FD + +A+LI+TD+L+ AS  L+  G+ 
Sbjct: 125 RGELKGFDAETQAISIEDDGV------VFEVPFDLVSNAKLILTDKLIAASRPLDTSGAD 178

Query: 190 AGL 192
             L
Sbjct: 179 EIL 181


>gi|260583737|ref|ZP_05851485.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633]
 gi|260158363|gb|EEW93431.1| conserved hypothetical protein [Granulicatella elegans ATCC 700633]
          Length = 157

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +A  +S++  PVIE   F  V +  ++  KN  L+ ++++  G + L DC  +S+  S
Sbjct: 2   SKVAELVSTLALPVIEAEGFELVDLEFVKEGKNWFLRFYLDKP-GGIDLDDCAFMSEKFS 60

Query: 78  PILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            +LD ++   I   Y LEVSSPG +RP+  + D     G  V          ++ L G +
Sbjct: 61  ELLDAQDPDPIPQAYFLEVSSPGAERPLKTEKDLKEAIGQYVHLSFYQQVEGEKFLEGFL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              ++    LE + +  K      + I  +++  ARL 
Sbjct: 121 TEVTDESVTLEVKIKTRKKS----VTIVRENIAKARLA 154


>gi|242278480|ref|YP_002990609.1| hypothetical protein Desal_1005 [Desulfovibrio salexigens DSM 2638]
 gi|259585762|sp|C6C0D6|RIMP_DESAD RecName: Full=Ribosome maturation factor rimP
 gi|242121374|gb|ACS79070.1| protein of unknown function DUF150 [Desulfovibrio salexigens DSM
           2638]
          Length = 155

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 7/158 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                LA  +S  ++P IE M      + +       + I+++  +  +++  C E+S+ 
Sbjct: 1   MEQGSLAKKVSQFVEPTIESMGLTLWGVEVTSANRPAVIIYIDS-ENGVSIDQCAEVSRD 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  +L+VE +I+  Y LEVSSPG++R   +      + G  +   +V S   ++K  G +
Sbjct: 60  VGLMLEVEEVIDSAYVLEVSSPGLERKFFKPEQMSAYVGKKIDIALVFSLEGRKKFKGLL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             T E G  L+ E        E  I I +D +  A+LI
Sbjct: 120 QETDEEGLLLKLED------QEDPIKIEWDRIKKAKLI 151


>gi|331084711|ref|ZP_08333799.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410805|gb|EGG90227.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 155

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P++E   F  V +  ++   N  L+ ++++  G + + DCE +S+A S IL
Sbjct: 8   EQKTEELILPIVEGNGFELVDVEYVKEGSNWYLRAYIDKP-GGIAVDDCEVVSRAFSEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ IE  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++  G +    +
Sbjct: 67  DREDYIEDTYIFEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRAIDRQKEFTGILKSYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    K     +IA+
Sbjct: 127 DTVTIEYEDGEPKTFERSEIAL 148


>gi|194467744|ref|ZP_03073730.1| protein of unknown function DUF150 [Lactobacillus reuteri 100-23]
 gi|194452597|gb|EDX41495.1| protein of unknown function DUF150 [Lactobacillus reuteri 100-23]
          Length = 157

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P++++  F    +  ++  K+  L++++++ DG +TL DC  +S  +S
Sbjct: 2   SSVVETVTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYIDK-DGGITLEDCALVSDELS 60

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G +
Sbjct: 61  EALDNVEPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKIYEGTL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              S+    L+   +        QI I    +  ARL 
Sbjct: 121 TQLSDKEITLDYLDK----TRHRQITIDRQKIAQARLA 154


>gi|323489586|ref|ZP_08094813.1| hypothetical protein GPDM_09575 [Planococcus donghaensis MPA1U2]
 gi|323396717|gb|EGA89536.1| hypothetical protein GPDM_09575 [Planococcus donghaensis MPA1U2]
          Length = 161

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   I  + QP+  E+    V +  L+E     L+++V+  +  + +  C  +S+ +S
Sbjct: 2   SKITEQIEQIAQPITSELGLELVDVEFLKEGRDWFLRVYVDNPEAPIDIEQCALVSEKLS 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILD  + IE +Y LEVSSPG +RP+ ++ DF +  G  +  +      D ++  G +  
Sbjct: 62  GILDELDPIEQNYFLEVSSPGAERPLKKEKDFEKAIGKFIYIKTYEPVEDAKEFEGYLKS 121

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             +    +E     +       I+I+ + +   RL + 
Sbjct: 122 YDDEQVEIEI----KIKTRRKIISIAKNKIAVIRLAID 155


>gi|227544952|ref|ZP_03975001.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           CF48-3A]
 gi|300910017|ref|ZP_07127477.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           SD2112]
 gi|77745317|gb|ABB02559.1| unknown [Lactobacillus reuteri]
 gi|227185063|gb|EEI65134.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           CF48-3A]
 gi|300892665|gb|EFK86025.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           SD2112]
          Length = 162

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P++++  F    +  ++  K+  L++++++ DG +TL DC  +S  +S
Sbjct: 7   SSVVETVTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYIDK-DGGITLEDCALVSDELS 65

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G +
Sbjct: 66  EALDNVEPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKVYEGTL 125

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              S     L+   +        QI I    +  ARL 
Sbjct: 126 TQLSNKEITLDYLDK----TRHRQITIDRQKIAQARLA 159


>gi|15924255|ref|NP_371789.1| hypothetical protein SAV1265 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926848|ref|NP_374381.1| hypothetical protein SA1108 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148267755|ref|YP_001246698.1| hypothetical protein SaurJH9_1325 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393814|ref|YP_001316489.1| hypothetical protein SaurJH1_1351 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156979586|ref|YP_001441845.1| hypothetical protein SAHV_1255 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315621|ref|ZP_04838834.1| hypothetical protein SauraC_05652 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253733497|ref|ZP_04867662.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|255006052|ref|ZP_05144653.2| hypothetical protein SauraM_06265 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257795679|ref|ZP_05644658.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258416082|ref|ZP_05682350.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258421665|ref|ZP_05684589.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258434821|ref|ZP_05688895.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258444603|ref|ZP_05692932.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258447564|ref|ZP_05695708.1| hypothetical protein SAIG_00219 [Staphylococcus aureus A6300]
 gi|258449406|ref|ZP_05697509.1| hypothetical protein SAHG_00482 [Staphylococcus aureus A6224]
 gi|258454785|ref|ZP_05702749.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|269202882|ref|YP_003282151.1| hypothetical protein SAAV_1240 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892753|ref|ZP_06300988.1| hypothetical protein SGAG_00108 [Staphylococcus aureus A8117]
 gi|282927607|ref|ZP_06335223.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|295406202|ref|ZP_06816009.1| UPF0090 protein [Staphylococcus aureus A8819]
 gi|296274823|ref|ZP_06857330.1| hypothetical protein SauraMR_00705 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297244430|ref|ZP_06928313.1| hypothetical protein SLAG_00512 [Staphylococcus aureus A8796]
 gi|54040041|sp|P67221|RIMP_STAAN RecName: Full=Ribosome maturation factor rimP
 gi|54042669|sp|P67220|RIMP_STAAM RecName: Full=Ribosome maturation factor rimP
 gi|166977846|sp|A7X1P6|RIMP_STAA1 RecName: Full=Ribosome maturation factor rimP
 gi|189038661|sp|A5ISE9|RIMP_STAA9 RecName: Full=Ribosome maturation factor rimP
 gi|189038668|sp|A6U184|RIMP_STAA2 RecName: Full=Ribosome maturation factor rimP
 gi|13701065|dbj|BAB42360.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247035|dbj|BAB57427.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740824|gb|ABQ49122.1| protein of unknown function DUF150 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946266|gb|ABR52202.1| protein of unknown function DUF150 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156721721|dbj|BAF78138.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253728551|gb|EES97280.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|257789651|gb|EEV27991.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257839230|gb|EEV63706.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257842351|gb|EEV66776.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257849182|gb|EEV73164.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257850096|gb|EEV74049.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257853755|gb|EEV76714.1| hypothetical protein SAIG_00219 [Staphylococcus aureus A6300]
 gi|257857394|gb|EEV80292.1| hypothetical protein SAHG_00482 [Staphylococcus aureus A6224]
 gi|257863168|gb|EEV85932.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262075172|gb|ACY11145.1| hypothetical protein SAAV_1240 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590610|gb|EFB95687.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282764750|gb|EFC04875.1| hypothetical protein SGAG_00108 [Staphylococcus aureus A8117]
 gi|285816947|gb|ADC37434.1| clustered with transcription termination protein NusA
           [Staphylococcus aureus 04-02981]
 gi|294968790|gb|EFG44812.1| UPF0090 protein [Staphylococcus aureus A8819]
 gi|297178460|gb|EFH37706.1| hypothetical protein SLAG_00512 [Staphylococcus aureus A8796]
 gi|312829659|emb|CBX34501.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315131059|gb|EFT87043.1| hypothetical protein CGSSa03_05939 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727532|gb|EGG63988.1| hypothetical protein SA21172_0119 [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 155

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  ++QP++E+++F  V +  ++E     L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQVEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I   Y L+V+SPG +RP+ ++ DF       V   + +    +++ +G +  
Sbjct: 61  EAMDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            +     ++     +       I I  D +  AR
Sbjct: 121 VNNETIVVQV----KIKARTKDIEIPRDKIAKAR 150


>gi|167630354|ref|YP_001680853.1| conserved hypothetical protein, possible yhbc family
           [Heliobacterium modesticaldum Ice1]
 gi|259585782|sp|B0THQ9|RIMP_HELMI RecName: Full=Ribosome maturation factor rimP
 gi|167593094|gb|ABZ84842.1| conserved hypothetical protein, possible yhbc family
           [Heliobacterium modesticaldum Ice1]
          Length = 154

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +S+   P++EE+    + +  ++   N  L+IF+++ +  + + DC+E+S+ I  I
Sbjct: 7   LEDRVSAWAMPIVEELGLELIDVEWVKEGGNWYLRIFIDK-EAGIEMEDCQEVSRRIDEI 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ +   Y LEVSSPGIDRP+    D+ R+ G  V           ++ +G++ G +
Sbjct: 66  LDREDPVAHSYSLEVSSPGIDRPLKSDRDYERFRGETVRITTFAPVMGAKEHLGELAGKN 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ET   +          N+ ++AI    + S RL  
Sbjct: 126 ETSILIR--------KNDEEMAIPLTQVSSVRLYP 152


>gi|299534744|ref|ZP_07048074.1| hypothetical protein BFZC1_01897 [Lysinibacillus fusiformis ZC1]
 gi|298729832|gb|EFI70377.1| hypothetical protein BFZC1_01897 [Lysinibacillus fusiformis ZC1]
          Length = 158

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 79/158 (50%), Gaps = 5/158 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   I  + +P+++E++   V I  ++E     L+++V+  +G + +  C ++S+ +S
Sbjct: 2   SKVPSLIEELAKPIVDELNLELVDIEFVKEGRNWFLRVYVDTPEGGIDIDQCAQVSERLS 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD ++ I  +Y LEVSSPG +RP+ + +DF++  G  +  +      D ++  G +  
Sbjct: 62  LLLDEKDPITQNYYLEVSSPGAERPLKKDTDFVKAVGKFIYVKTYEPIKDMKEFQGYLTS 121

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             E    +E          ++ + I  + +  ARL + 
Sbjct: 122 YDEHTLVMEV----RIKTRKITVTIEQEKIALARLAID 155


>gi|325661696|ref|ZP_08150319.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471949|gb|EGC75164.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 174

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P++E   F  V +  ++   N  L+ ++++  G + + DCE +S+A S IL
Sbjct: 27  EQKTEELILPIVEGNGFELVDVEYVKEGSNWYLRAYIDKP-GGIAVDDCEVVSRAFSEIL 85

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ IE  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++  G +    +
Sbjct: 86  DREDYIEDTYIFEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRAIDRQKEFTGILKSYDK 145

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    K     +IA+
Sbjct: 146 DTVTIEYEDGEPKTFERSEIAL 167


>gi|259016316|sp|Q9PGR5|RIMP_XYLFA RecName: Full=Ribosome maturation factor rimP
          Length = 199

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 14/166 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDC 69
             D G+   I +++ P +E + F  +    L      +L+++++     + +  +++ DC
Sbjct: 1   MSDKGIE--IVNLLAPKVETLGFELLGAEYLLVPSGAILRLYIDTPFAMQPECMVSIDDC 58

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E +S+ +S  LDVE  I G+Y LEVSSPG+DR +     F R     V   + L     +
Sbjct: 59  ERVSREVSAYLDVEEPISGNYTLEVSSPGLDRRLFTLEQFARHYNQFVKVGLKLPQHGSR 118

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +L GKI+         + +      +N +++A+ F+++  AR++  
Sbjct: 119 RLQGKIVRVE------QVDGFVVLLVNGVELAVDFNNIDKARIVPD 158


>gi|186476489|ref|YP_001857959.1| hypothetical protein Bphy_1731 [Burkholderia phymatum STM815]
 gi|226736435|sp|B2JKT6|RIMP_BURP8 RecName: Full=Ribosome maturation factor rimP
 gi|184192948|gb|ACC70913.1| protein of unknown function DUF150 [Burkholderia phymatum STM815]
          Length = 152

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 9/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++    + + DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVVGLGYELVDLERTGRG--MLCIYIDQP-AGIAIEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +        
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEAVITLKKPLDGRKSYRGILHAPEGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE E +         +  +   +  ARL+ 
Sbjct: 117 GLEFEGKE----GAAMLDFTLADIDKARLVP 143


>gi|256847047|ref|ZP_05552493.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715711|gb|EEU30686.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 159

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 8/162 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++ ++QP++++  F       ++E +   L++++++  G +TL DC  +S 
Sbjct: 1   MSTKDVIKTVNELVQPILDQYDFYLFDTEFVKEGHSWYLRVYIDK-TGGITLEDCVNVSD 59

Query: 75  AISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            +S  LD  +   I   Y LEVSSPG +RP+ ++ D+ R  G  +   +  +   K+   
Sbjct: 60  QLSEALDNCDPDPIPQAYFLEVSSPGAERPLKKEEDYHRAIGEYIHLSLYQALEGKKVYE 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G +   +     ++   +         + I    +  ARL V
Sbjct: 120 GNLKTVTADELTIDYLDK----TRHKTLTIPRKLVAKARLAV 157


>gi|223044231|ref|ZP_03614268.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
           [Staphylococcus capitis SK14]
 gi|222442381|gb|EEE48489.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
           [Staphylococcus capitis SK14]
          Length = 155

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++IQP+++++ F  V+I  ++  K+  L++ +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQVETIIQPILDDLKFELVEIEYVKEGKDRFLRVSIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I   Y L+V+SPG +RP+ +  DF       +   +       ++ +G +  
Sbjct: 61  EAMDENDPIPEMYYLDVASPGAERPIKKDKDFQNAVSQPIFVSLYAPIEGDKEWLGILKS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             E    +E +++ +      +I I  + +  AR
Sbjct: 121 VDEDNIVMEVKEKSKTK----EIEIPRNKIAKAR 150


>gi|331701345|ref|YP_004398304.1| ribosome maturation factor rimP [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128688|gb|AEB73241.1| Ribosome maturation factor rimP [Lactobacillus buchneri NRRL
           B-30929]
          Length = 157

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++P++E+ SF    +  ++E K+  L++++++  G +T+ DC  +S  +S
Sbjct: 2   SNVVETVKQVVEPILEKHSFYLFDVEFVKENKSWYLRVYIDKK-GGITIDDCVLVSDELS 60

Query: 78  PIL--DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             L     + I   Y LEVSSPG +RP+   ++  +  G  +   +  +    +   G +
Sbjct: 61  EKLDAMDPDPIPQAYFLEVSSPGAERPLRNDAELKQAIGEYIHVSLYQNLNGNKTFEGIL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +    L+ +K G++D     + +  + +  ARL 
Sbjct: 121 KSLDDDKLVLQNDKWGKQD----TLEVPRNLIAKARLA 154


>gi|148543927|ref|YP_001271297.1| hypothetical protein Lreu_0695 [Lactobacillus reuteri DSM 20016]
 gi|184153323|ref|YP_001841664.1| hypothetical protein LAR_0668 [Lactobacillus reuteri JCM 1112]
 gi|167016762|sp|A5VJD6|RIMP_LACRD RecName: Full=Ribosome maturation factor rimP
 gi|226708007|sp|B2G6V2|RIMP_LACRJ RecName: Full=Ribosome maturation factor rimP
 gi|148530961|gb|ABQ82960.1| protein of unknown function DUF150 [Lactobacillus reuteri DSM
           20016]
 gi|183224667|dbj|BAG25184.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
          Length = 157

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P++++  F    +  ++  K+  L++++   DG +TL DC  +S  +S
Sbjct: 2   SSVVETVTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYI-NKDGGITLEDCALVSDELS 60

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G +
Sbjct: 61  EALDNVEPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKVYEGTL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              S+    L+   +        QI I    +  ARL 
Sbjct: 121 TQLSDKEITLDYLDK----TRHRQITIDRQKIAQARLA 154


>gi|325569919|ref|ZP_08145913.1| protein of hypothetical function DUF150 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325157042|gb|EGC69210.1| protein of hypothetical function DUF150 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 170

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 73/150 (48%), Gaps = 8/150 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VE 83
            ++ P+++   F  V++  ++  KN  L++F+++ +G + + +C  +S+ +S  LD    
Sbjct: 23  DIVTPILDAQKFELVEVEFVKEGKNWFLRVFIDK-EGGIDIEECAFVSEQLSEQLDQCEP 81

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPG +RP+ +++D+ R  G  +   +      +++  G +    E   
Sbjct: 82  DPIPQAYFLEVSSPGAERPLKKEADYQRAVGEYIHVSLYQPIDGEKQFEGFLQSFDENQL 141

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +    +      E +  I   ++  ARL 
Sbjct: 142 VM----KTRIKTREKERTIDRKNIAKARLA 167


>gi|254283179|ref|ZP_04958147.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
 gi|219679382|gb|EED35731.1| conserved hypothetical protein [gamma proteobacterium NOR51-B]
          Length = 168

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 17/175 (9%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +S ++ P IE + F    + LL   +    +++++R++  +T+ DC  +S+ IS 
Sbjct: 3   GKTTQLSELLTPTIESLGFELWGLELLPPFRKPTFRVYIDREE-GVTVDDCAMVSRHISG 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I+  + LEVSSPGIDR + R   +  + G  +   + +    ++K  G     
Sbjct: 62  VLDVEDPIQTEFTLEVSSPGIDRLLFRPEQYRLYIGEPIEVRLRMPFEGRRKFRGW---- 117

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE-------LLRASLNNY 186
                   +         E +  +  +S+  A++    E       L R S    
Sbjct: 118 ----LVGVEGDEVVVRAGEHEYVLPLNSVERAKVEPRVEIGKGKNKLKRESAKAE 168


>gi|312793235|ref|YP_004026158.1| hypothetical protein Calkr_1037 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876953|ref|ZP_07736928.1| protein of unknown function DUF150 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796268|gb|EFR12622.1| protein of unknown function DUF150 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312180375|gb|ADQ40545.1| protein of unknown function DUF150 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 151

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  +++P++E+  F  V I   +E     L++++++  G +T+ DC+ +S+ +S
Sbjct: 2   SKITKKVEELVKPILEKYGFDLVDIEFKKEGRSYFLRVYIDKP-GGITIDDCQLVSEELS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ K+ G+++ 
Sbjct: 61  EKLDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNRGRVVDVFLNQPFLNRTKITGELVE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +E    L  +K          I I  +++   +L 
Sbjct: 121 KNEKSLVLIVDKEK--------IDIPVENIKKVKLA 148


>gi|259016312|sp|Q3IJ55|RIMP_PSEHT RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L  D+ +++ P +E + F    +  +   ++  L++++   +  +++ +C + S+ IS
Sbjct: 2   TKLEQDLVAMLTPAVEMLGFELHGLEFVQAGRHSTLRVYITH-EAGISVDNCADASRQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I   Y LEVSSPG+DR + ++  + +  G  V     L    ++   G ++ 
Sbjct: 61  AILDVEDPITNEYDLEVSSPGVDRLLFKQDHYEQAQGEEVQLRTKLPQDGRRNFKGDLIA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +     L  +          +  I   ++  A +I
Sbjct: 121 VTSDMITLSSDG--------TEHLIMLSNIERANII 148


>gi|212634072|ref|YP_002310597.1| hypothetical protein swp_1216 [Shewanella piezotolerans WP3]
 gi|212555556|gb|ACJ28010.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 141

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 71/147 (48%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++  +E +      +  +   K+ +L+++++  +  + + DC E S+ +S ++DVE+ I
Sbjct: 1   MLKAPVEALGHELWGLEYIQAGKHSILRLYIDN-EKGIFIEDCAETSRQVSAVMDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+     +  + G  V  ++ +     + L G ++G       L 
Sbjct: 60  STEYTLEVSSPGVDRPLFTAEQYQLYIGETVKVQVTMPVAGSRNLKGTVIGIEGQMLTLS 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            +          ++ I+ D++    LI
Sbjct: 120 VDG--------NELIIALDNIRKGNLI 138


>gi|314933444|ref|ZP_07840809.1| conserved hypothetical protein [Staphylococcus caprae C87]
 gi|313653594|gb|EFS17351.1| conserved hypothetical protein [Staphylococcus caprae C87]
          Length = 155

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++IQP+++++ F  V+I  ++  K+  L++ +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQVETIIQPILDDLKFELVEIEYVKEGKDRFLRVSIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I   Y L+V+SPG +RP+ ++ DF       +   +       ++ +G +  
Sbjct: 61  EAMDENDPIPEMYYLDVASPGAERPIKKEKDFQNAVSQPIFVSLYAPIEGDKEWLGILKS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             E    +E +++ +      +I I  + +  AR
Sbjct: 121 VDEENIVMEVKEKSKTK----EIEIPRNKIAKAR 150


>gi|225075065|ref|ZP_03718264.1| hypothetical protein NEIFLAOT_00064 [Neisseria flavescens
           NRL30031/H210]
 gi|224953549|gb|EEG34758.1| hypothetical protein NEIFLAOT_00064 [Neisseria flavescens
           NRL30031/H210]
          Length = 143

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  + +  L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDKTLPGLGYELVDFELTAQGD--LRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 59  DI--DYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRIESCENDIV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +           I   ++  ARL
Sbjct: 117 TVSFDGK--------TAQIELSNIDKARL 137


>gi|322382350|ref|ZP_08056257.1| hypothetical protein PL1_2630 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321153703|gb|EFX46078.1| hypothetical protein PL1_2630 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 153

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  +++  + E  F  V I  ++   N  L+++V++ +G + + DC  +S+ 
Sbjct: 1   MSSSIKSIVEEMMKDYLTENGFELVDIEYVKEGSNWFLRVYVDKLEGGIDIEDCGRISEY 60

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD ++ I   Y LEVSSPG +RP+ +  D  +  G  V         + ++  G++
Sbjct: 61  LSAKLDEKDPIPTAYFLEVSSPGAERPLKKPQDIAKSVGKHVFITTYEPVDNAKEFEGEL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +        ++  K+          +I ++ + SARL 
Sbjct: 121 LSFDGETLVVKTAKKKS--------SIPYEKVASARLA 150


>gi|312127898|ref|YP_003992772.1| hypothetical protein Calhy_1688 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777917|gb|ADQ07403.1| protein of unknown function DUF150 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 151

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  +++P++E   F  V I   +E     L++++++  G +T+ DC+ +S+ +S
Sbjct: 2   SKITKKVEELVKPILERYGFDLVDIEFKKEGKSYFLRVYIDKP-GGITIDDCQLVSEELS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ K+ G+++ 
Sbjct: 61  EKLDIVDPIPFSYYLEVSSPGVDRPLVTDRDFVRNRGRVVDVFLNQPFLNRTKITGELVE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +E    L  +K          I I  +++   +L 
Sbjct: 121 KNEKSLVLIVDKEK--------IDIPVENIKKVKLA 148


>gi|71281315|ref|YP_268926.1| hypothetical protein CPS_2201 [Colwellia psychrerythraea 34H]
 gi|91208404|sp|Q482U1|RIMP_COLP3 RecName: Full=Ribosome maturation factor rimP
 gi|71147055|gb|AAZ27528.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 151

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 10/155 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
                ++ +++P +EE       I       N +L++F++  +  + + DC E+S+ +  
Sbjct: 3   KFEQKLTDLLRPAVEETGKTLHGIEYISAGNNSVLRLFIDH-ENGINVDDCAEVSRQVGA 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILDVE+ I   Y LEVSSPG+DRP+   + F    G  +  +I +    ++K  G ++  
Sbjct: 62  ILDVEDPISSEYSLEVSSPGVDRPLFELAHFQEVIGETINVKISMPLNGRRKFKGPLVAI 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 +E +         +   ++  ++  A L+
Sbjct: 122 ENDTLIVEVD--------SIDYELAISNIDKANLV 148


>gi|259503124|ref|ZP_05746026.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259168990|gb|EEW53485.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 171

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 11/176 (6%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER 59
           M +    ++    R+     +   ++ ++ P+++E  F    I  ++  K+  L++++++
Sbjct: 1   MLALFIANNMEVKRMST---VTEVVTDLVTPILDEHHFYLYDIEFVKEGKSWYLRVYIDK 57

Query: 60  DDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
            DG +TL DC  +S  +S  LD    + I   Y LEVSSPG +RP+  + D+ R   H +
Sbjct: 58  -DGGITLNDCAAVSDQLSEALDNVEPDPIPQAYFLEVSSPGAERPLKNEDDYQRAVNHYI 116

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +      K+   G ++  S     L    +        Q+ I    +  ARL 
Sbjct: 117 HVSLYQQLAGKKVYEGTLVELSAKEMTLNFMDK----TRHRQVVIDRSKVAQARLA 168


>gi|56478753|ref|YP_160342.1| hypothetical protein ebA5838 [Aromatoleum aromaticum EbN1]
 gi|81356614|sp|Q5NZS3|RIMP_AZOSE RecName: Full=Ribosome maturation factor rimP
 gi|56314796|emb|CAI09441.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 142

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 12/151 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++ V+  + F  V       K  L+++F++  +  +T+ DC  +S  ++ + +VE
Sbjct: 2   DVEGLVEQVVSGLGFELVDFETSP-KGRLMRVFID-IERGVTVDDCATVSNQLTRVFEVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ + +DF R+ G  V   + +  G+++  IG + G SE   
Sbjct: 60  NV--DYDRLEVSSPGLDRPLKKTADFERFAGDEVQVRLRMPIGNQRNFIGVLEGLSEGVV 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            L  +K          +A  FD +  ARL+ 
Sbjct: 118 RLHTDK--------GDVAFPFDEIEKARLVP 140


>gi|21282877|ref|NP_645965.1| hypothetical protein MW1148 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49483428|ref|YP_040652.1| hypothetical protein SAR1241 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486104|ref|YP_043325.1| hypothetical protein SAS1199 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651835|ref|YP_186141.1| hypothetical protein SACOL1284 [Staphylococcus aureus subsp. aureus
           COL]
 gi|82750866|ref|YP_416607.1| hypothetical protein SAB1127 [Staphylococcus aureus RF122]
 gi|87160896|ref|YP_493855.1| hypothetical protein SAUSA300_1158 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194975|ref|YP_499775.1| hypothetical protein SAOUHSC_01242 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221387|ref|YP_001332209.1| hypothetical protein NWMN_1175 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509431|ref|YP_001575090.1| hypothetical protein USA300HOU_1197 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142499|ref|ZP_03566992.1| hypothetical protein SauraJ_12822 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253731884|ref|ZP_04866049.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257425319|ref|ZP_05601744.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427980|ref|ZP_05604378.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430613|ref|ZP_05606995.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433373|ref|ZP_05609731.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436215|ref|ZP_05612262.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|258423894|ref|ZP_05686779.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|258452564|ref|ZP_05700570.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|262048157|ref|ZP_06021044.1| hypothetical protein SAD30_1933 [Staphylococcus aureus D30]
 gi|262051327|ref|ZP_06023550.1| hypothetical protein SA930_2049 [Staphylococcus aureus 930918-3]
 gi|282903820|ref|ZP_06311708.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|282905583|ref|ZP_06313438.1| hypothetical protein SDAG_01207 [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282908558|ref|ZP_06316388.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910837|ref|ZP_06318640.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914042|ref|ZP_06321829.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282916525|ref|ZP_06324283.1| hypothetical protein SATG_00018 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282918964|ref|ZP_06326699.1| hypothetical protein SASG_00270 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282920509|ref|ZP_06328230.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282924087|ref|ZP_06331763.1| hypothetical protein SARG_01628 [Staphylococcus aureus subsp.
           aureus C101]
 gi|283770329|ref|ZP_06343221.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958008|ref|ZP_06375459.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024258|ref|ZP_06378656.1| hypothetical protein Saura13_06684 [Staphylococcus aureus subsp.
           aureus 132]
 gi|293501074|ref|ZP_06666925.1| hypothetical protein SCAG_01604 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510036|ref|ZP_06668744.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526622|ref|ZP_06671307.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294848261|ref|ZP_06789008.1| hypothetical protein SKAG_00320 [Staphylococcus aureus A9754]
 gi|295427752|ref|ZP_06820384.1| UPF0090 protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297208089|ref|ZP_06924520.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297591290|ref|ZP_06949928.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus MN8]
 gi|300912170|ref|ZP_07129613.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304381171|ref|ZP_07363824.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|34222911|sp|Q8NWZ3|RIMP_STAAW RecName: Full=Ribosome maturation factor rimP
 gi|56749717|sp|Q6G9U8|RIMP_STAAS RecName: Full=Ribosome maturation factor rimP
 gi|56749746|sp|Q6GHH0|RIMP_STAAR RecName: Full=Ribosome maturation factor rimP
 gi|81694636|sp|Q5HGG6|RIMP_STAAC RecName: Full=Ribosome maturation factor rimP
 gi|91207999|sp|Q2YXK3|RIMP_STAAB RecName: Full=Ribosome maturation factor rimP
 gi|122540592|sp|Q2G2D3|RIMP_STAA8 RecName: Full=Ribosome maturation factor rimP
 gi|123486179|sp|Q2FHH3|RIMP_STAA3 RecName: Full=Ribosome maturation factor rimP
 gi|189038628|sp|A8Z3U5|RIMP_STAAT RecName: Full=Ribosome maturation factor rimP
 gi|205405730|sp|A6QGG5|RIMP_STAAE RecName: Full=Ribosome maturation factor rimP
 gi|21204316|dbj|BAB95013.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49241557|emb|CAG40243.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244547|emb|CAG42976.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286021|gb|AAW38115.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|82656397|emb|CAI80816.1| conserved hypothetical protein [Staphylococcus aureus RF122]
 gi|87126870|gb|ABD21384.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202533|gb|ABD30343.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374187|dbj|BAF67447.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368240|gb|ABX29211.1| hypothetical protein USA300HOU_1197 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253724294|gb|EES93023.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257271776|gb|EEV03914.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274821|gb|EEV06308.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278741|gb|EEV09360.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281466|gb|EEV11603.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284497|gb|EEV14617.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257845923|gb|EEV69952.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|257859782|gb|EEV82624.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|259160702|gb|EEW45723.1| hypothetical protein SA930_2049 [Staphylococcus aureus 930918-3]
 gi|259163723|gb|EEW48278.1| hypothetical protein SAD30_1933 [Staphylococcus aureus D30]
 gi|269940756|emb|CBI49138.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282314059|gb|EFB44451.1| hypothetical protein SARG_01628 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316774|gb|EFB47148.1| hypothetical protein SASG_00270 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282319012|gb|EFB49364.1| hypothetical protein SATG_00018 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282322110|gb|EFB52434.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M899]
 gi|282325442|gb|EFB55751.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327620|gb|EFB57903.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330875|gb|EFB60389.1| hypothetical protein SDAG_01207 [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282594171|gb|EFB99158.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282595438|gb|EFC00402.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           C160]
 gi|283460476|gb|EFC07566.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           H19]
 gi|283470480|emb|CAQ49691.1| protein LMOf2365_1338 [Staphylococcus aureus subsp. aureus ST398]
 gi|283790157|gb|EFC28974.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920694|gb|EFD97757.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096079|gb|EFE26340.1| hypothetical protein SCAG_01604 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466980|gb|EFF09498.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M809]
 gi|294825061|gb|EFG41483.1| hypothetical protein SKAG_00320 [Staphylococcus aureus A9754]
 gi|295128110|gb|EFG57744.1| UPF0090 protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296887332|gb|EFH26234.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|297576176|gb|EFH94892.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus MN8]
 gi|298694557|gb|ADI97779.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300886416|gb|EFK81618.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|302332871|gb|ADL23064.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751088|gb|ADL65265.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340154|gb|EFM06095.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312438355|gb|ADQ77426.1| protein of hypothetical function DUF150 [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315194153|gb|EFU24546.1| hypothetical protein CGSSa00_05608 [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315198507|gb|EFU28836.1| hypothetical protein CGSSa01_02741 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140918|gb|EFW32765.1| hypothetical protein HMPREF9528_00535 [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144366|gb|EFW36132.1| hypothetical protein HMPREF9529_00249 [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323441045|gb|EGA98752.1| hypothetical protein SAO11_0112 [Staphylococcus aureus O11]
 gi|323443914|gb|EGB01525.1| hypothetical protein SAO46_0024 [Staphylococcus aureus O46]
 gi|329313935|gb|AEB88348.1| Ribosome maturation factor rimP [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727856|gb|EGG64307.1| hypothetical protein SA21189_0300 [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329733678|gb|EGG70006.1| hypothetical protein SA21193_0242 [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 155

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  +++P++E+++F  V +  ++E     L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQVEVIVKPIMEDLNFELVDVEYVKEGRDHFLRISIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I   Y L+V+SPG +RP+ ++ DF       V   + +    +++ +G +  
Sbjct: 61  EAMDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            +     ++     +       I I  D +  AR
Sbjct: 121 VNNETIVVQV----KIKARTKDIEIPRDKIAKAR 150


>gi|319637702|ref|ZP_07992468.1| hypothetical protein HMPREF0604_00091 [Neisseria mucosa C102]
 gi|317400857|gb|EFV81512.1| hypothetical protein HMPREF0604_00091 [Neisseria mucosa C102]
          Length = 143

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  + +  L+IF+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDKTLPGLGYELVDFELTAQGD--LRIFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 59  DI--DYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRIESCENDIV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +           I   ++  ARL
Sbjct: 117 TVSFDGK--------TAQIELSNIDKARL 137


>gi|323141192|ref|ZP_08076093.1| hypothetical protein HMPREF9443_00865 [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414335|gb|EFY05153.1| hypothetical protein HMPREF9443_00865 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 187

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 1/151 (0%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            E ++     +   I++++ P++++     V +  + EK+  L+IF+++  G + + DC+
Sbjct: 25  MEVKMMQAKEVEALITAMVDPLLQDTGLTLVDVEYVREKDWYLRIFLDKP-GGVEIDDCQ 83

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ ++ ILD E+ I   Y LEVSSPGIDRP+ +  DF    G  V           + 
Sbjct: 84  MVSEKLTEILDAEDPIPDKYFLEVSSPGIDRPLKKDKDFEAAYGTKVDIMFYTPWEGMKN 143

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIA 161
           L G ++   +    ++K  +G++  N  +I 
Sbjct: 144 LTGILVAHDDEAVQVKKIIKGKEFKNPDRIE 174


>gi|146297078|ref|YP_001180849.1| hypothetical protein Csac_2073 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|226701152|sp|A4XL73|RIMP_CALS8 RecName: Full=Ribosome maturation factor rimP
 gi|145410654|gb|ABP67658.1| protein of unknown function DUF150 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 151

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  +++P++E+  F  V I   +  K   L++++++  G +T+ DC+ +S+ +S
Sbjct: 2   SKVTKKVEELVKPILEKYGFDLVDIEFKKEGKKHFLRVYIDKP-GGITIDDCQLVSEELS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     +  KL G+++ 
Sbjct: 61  NKLDIVDPIPFSYYLEVSSPGVDRPLVNDRDFIRNKGRVVDVFLKQPIMNTTKLTGELVE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +E    +  +           I+I F+++   ++ 
Sbjct: 121 KNEDVLIIMIDGE--------NISIPFENVKKVKVA 148


>gi|288817342|ref|YP_003431689.1| hypothetical protein HTH_0021 [Hydrogenobacter thermophilus TK-6]
 gi|288786741|dbj|BAI68488.1| hypothetical protein HTH_0021 [Hydrogenobacter thermophilus TK-6]
 gi|308750949|gb|ADO44432.1| protein of unknown function DUF150 [Hydrogenobacter thermophilus
           TK-6]
          Length = 157

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 7/157 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
             +  +   +  + +P+I+ + F+   +    E+  +L++ +++ DG +T+ DCEE+S+ 
Sbjct: 3   INEKSIVEKVRQLAEPIIKNLGFKLFDVEFKPERGWVLRVILDK-DGGITVNDCEEVSKR 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LDVE+II   Y LEVSSPG+ R + +   +  + G ++   +  +   K++L G I
Sbjct: 62  LSALLDVEDIIPTSYILEVSSPGLTRELTKPEHYEFFKGRLIRLVLREALEGKRELKGYI 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +   E    L ++  G+              +  A L
Sbjct: 122 VDVKEGILQLREKDSGKMFHT------PLSIVARAHL 152


>gi|241760269|ref|ZP_04758364.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|261379746|ref|ZP_05984319.1| hypothetical protein NEISUBOT_03607 [Neisseria subflava NJ9703]
 gi|241319147|gb|EER55625.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|284797424|gb|EFC52771.1| hypothetical protein NEISUBOT_03607 [Neisseria subflava NJ9703]
          Length = 143

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  + +  L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDKTLPGLGYELVDFELTAQGD--LRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +I   + RLE+SSPG+DRP+ + +DF+R+ G     +  L    ++  IG+I        
Sbjct: 59  DI--DYKRLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGRIESCENDIV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +           I   ++  ARL
Sbjct: 117 TVSFDGK--------TAQIELSNIDKARL 137


>gi|227364836|ref|ZP_03848883.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM2-3]
 gi|325682538|ref|ZP_08162055.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM4-1A]
 gi|227070099|gb|EEI08475.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM2-3]
 gi|324978377|gb|EGC15327.1| protein of hypothetical function DUF150 [Lactobacillus reuteri
           MM4-1A]
          Length = 162

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P++++  F    +  ++  K+  L++++   DG +TL DC  +S  +S
Sbjct: 7   SSVVETVTDLVTPILQDHDFYLYDLEFVKEGKSWYLRVYI-NKDGGITLEDCALVSDELS 65

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+ ++ D+ R   H +   +      ++   G +
Sbjct: 66  EALDNVEPDPIPQAYFLEVSSPGAERPLKKEEDYQRAIDHYIHISLYQQINGQKVYEGTL 125

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              S+    L+   +        QI I    +  ARL 
Sbjct: 126 TQLSDKEITLDYLDK----TRHRQITIDRQKIAQARLA 159


>gi|167746759|ref|ZP_02418886.1| hypothetical protein ANACAC_01471 [Anaerostipes caccae DSM 14662]
 gi|167653719|gb|EDR97848.1| hypothetical protein ANACAC_01471 [Anaerostipes caccae DSM 14662]
          Length = 171

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 10/171 (5%)

Query: 6   FLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNM 64
           F   + +  + G   +      ++ P+I+E  F  V +  ++   N  L+I+ ++ DG +
Sbjct: 9   FAQKRRQGNLAGKAEIEQKTEELVTPIIDENHFELVDVEYVKEGANWYLRIYADK-DGGI 67

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           ++ DC  +S+A+   LD ++ I+  Y LEVSSPG+ RP+ ++ D+ R  G  V  ++  +
Sbjct: 68  SIDDCVLISRALEAKLDADDFIKDAYILEVSSPGLGRPLKKEKDYQRSIGQSVDIKLYKA 127

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
              +++  G +   S+    L      +             S+ SARL + 
Sbjct: 128 IDKQKEFTGILKEYSKERIILSIGGTDQ--------EFETKSVASARLSLD 170


>gi|325981568|ref|YP_004293970.1| hypothetical protein NAL212_0881 [Nitrosomonas sp. AL212]
 gi|325531087|gb|ADZ25808.1| protein of unknown function DUF150 [Nitrosomonas sp. AL212]
          Length = 155

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 12/150 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +  + +  V++        LL+IFV++ +  + + DC  +S  +S +L VEN
Sbjct: 16  LEELLESTLHGLGYELVEVERSAHN-KLLRIFVDKAE-GICIDDCVTISNHLSRLLAVEN 73

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           I   + RLEVSSPG+DRP+ R++DF+R+ G  +  ++ +    ++  +G +         
Sbjct: 74  I--DYGRLEVSSPGLDRPLRREADFIRFRGETIKLKLRIPLEGQKNFVGILREVDNGIIK 131

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           LE E +         + +   ++  ARL+ 
Sbjct: 132 LEIEGKL--------LDLELSNVGKARLVP 153


>gi|332686769|ref|YP_004456543.1| clustered with transcription termination protein NusA
           [Melissococcus plutonius ATCC 35311]
 gi|332370778|dbj|BAK21734.1| clustered with transcription termination protein NusA
           [Melissococcus plutonius ATCC 35311]
          Length = 157

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P++E+  F  + +  ++  K+  L++F+++  G + + +C  +S+ +S
Sbjct: 2   SSIIETVTKLVTPILEKQQFELIDVEFIKEGKSWYLRVFIDKK-GGIDIEECAFVSEQLS 60

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+  + D+    G  +   +  +    ++  G +
Sbjct: 61  EQLDSLEPDPIPQAYFLEVSSPGAERPLKNEHDYFNAIGEYIHLSLYQAVEGIKQFEGIL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               E    +E     +      +  I+  ++  ARL 
Sbjct: 121 ESIDEEQVVIEV----KIKTQRKKYIINRKNIAKARLA 154


>gi|217967592|ref|YP_002353098.1| protein of unknown function DUF150 [Dictyoglomus turgidum DSM 6724]
 gi|259585754|sp|B8E2Y4|RIMP_DICTD RecName: Full=Ribosome maturation factor rimP
 gi|217336691|gb|ACK42484.1| protein of unknown function DUF150 [Dictyoglomus turgidum DSM 6724]
          Length = 156

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  +++P+ E+ S+  V +    E    +L++++++  G +T+ DC  +S+ IS
Sbjct: 7   MELLKKLKDIVEPICEKYSYELVDLEYRREPHGWVLRVYIDKV-GGVTVEDCAYISEKIS 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+++ I   Y LEVSSPG+DRP+ RK DF R  G  V   ++     K+K+ GKI  
Sbjct: 66  KELDIKDPIPHSYILEVSSPGLDRPLKRKRDFERHIGEKVNITLLEEIEGKKKVEGKIFK 125

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    L+ +           + I  + +  A LIV
Sbjct: 126 VDEKNVTLKVDDSL--------MVIPIEKIKKALLIV 154


>gi|302872116|ref|YP_003840752.1| hypothetical protein COB47_1477 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574975|gb|ADL42766.1| protein of unknown function DUF150 [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 151

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  +++P++E   F  V I   +  K+  L++++++  G +T+ DC+ +S+ +S
Sbjct: 2   SKITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ K+ G+++ 
Sbjct: 61  DKLDIADPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGRVVDVFLKQPFLNRTKITGELVE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +E    L  +K          I I  +++   +L 
Sbjct: 121 KNEKSLVLIVDKEK--------IDIPVENVKKVKLA 148


>gi|169827164|ref|YP_001697322.1| hypothetical protein Bsph_1594 [Lysinibacillus sphaericus C3-41]
 gi|226734725|sp|B1HR01|RIMP_LYSSC RecName: Full=Ribosome maturation factor rimP
 gi|168991652|gb|ACA39192.1| UPF0090 protein [Lysinibacillus sphaericus C3-41]
          Length = 156

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 78/158 (49%), Gaps = 5/158 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   I  + +P+++E++   V I  ++E     L+++V+  +G + +  C ++S+ +S
Sbjct: 2   SKVPSLIEELAKPIVDELNLELVDIEFVKEGRNWFLRVYVDTPEGGIDIDQCAQVSERLS 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD ++ I  +Y LEVSSPG +RP+ + +DF +  G  +  +      D ++  G +  
Sbjct: 62  LLLDEKDPITQNYYLEVSSPGAERPLKKDADFEKAIGKFIYVKTYKPIKDMKEFQGYLTS 121

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             E    +E          ++ + I  + +  ARL + 
Sbjct: 122 YEEHTLVMEV----RIKTRKITVTIEQEKIALARLAID 155


>gi|225848028|ref|YP_002728191.1| hypothetical protein SULAZ_0194 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|259645121|sp|C1DXS9|RIMP_SULAA RecName: Full=Ribosome maturation factor rimP
 gi|225644280|gb|ACN99330.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 147

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  ++ P++E+   + V I  +  K  +L+I++   +   ++ DCE +SQ I  
Sbjct: 1   MKLEEKVKELLSPILEDRGLKLVDIEYITGKRPVLRIYIYNPE-GTSIDDCEYVSQRIGS 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILDVE++I+  Y LEVSSPG+DR      ++  + G  V  +      DK+   G + G 
Sbjct: 60  ILDVEDLIKTSYTLEVSSPGLDRKFKNIEEYNIFKGKDVVVKTKEPIEDKKIFKGILEGL 119

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    L+++         + + I  D +   +L  
Sbjct: 120 EDGIVKLKQDN--------IVVEIPLDKISQTKLDF 147


>gi|198282693|ref|YP_002219014.1| hypothetical protein Lferr_0553 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|259585660|sp|B5EMC8|RIMP_ACIF5 RecName: Full=Ribosome maturation factor rimP
 gi|198247214|gb|ACH82807.1| protein of unknown function DUF150 [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 153

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGN-MTLRDCEELSQAIS 77
            +   +   I           V   ++     + LQ+F+E+D+   +T+ DC  +S+ +S
Sbjct: 3   NVEDRLYEGIAQQAGIAGCTLVDARMVRTGRAVALQVFIEKDETTAVTIEDCAAVSRQLS 62

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LDVEN I G YRLEVSSPG+DRP+    DF R+ G      +   +  +++L G+++G
Sbjct: 63  LWLDVENPIHGAYRLEVSSPGLDRPLKNLHDFERFKGSQAEIHLHGLTQGRRRLQGELLG 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    L           E +   + D +  ARL+ 
Sbjct: 123 VEDQKIVL--------KNAEGRWTFALDDIHKARLVP 151


>gi|225023297|ref|ZP_03712489.1| hypothetical protein EIKCOROL_00150 [Eikenella corrodens ATCC
           23834]
 gi|224943942|gb|EEG25151.1| hypothetical protein EIKCOROL_00150 [Eikenella corrodens ATCC
           23834]
          Length = 141

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +V++  +  + +  V   L  + +  L++F+++ +  +T+ DC  +S  +S +  VE
Sbjct: 2   DIQAVLEKTLPGLGYELVDFELTAQGD--LRVFIDKPE-GITVEDCATVSNHLSRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++   + RLE+SSPG+DRP+ + +DF+R++G +V  +  L    ++  IG I        
Sbjct: 59  DV--DYKRLEISSPGLDRPLKKAADFIRFSGSLVKLKTRLPVEGQKNFIGHIENFENDVL 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +  + +          AI   ++  A L
Sbjct: 117 TIAFDGK--------TAAIELSNIDRAHL 137


>gi|189183524|ref|YP_001937309.1| hypothetical protein OTT_0617 [Orientia tsutsugamushi str. Ikeda]
 gi|254806539|sp|B3CR92|RIMP_ORITI RecName: Full=Ribosome maturation factor rimP
 gi|189180295|dbj|BAG40075.1| hypothetical protein OTT_0617 [Orientia tsutsugamushi str. Ikeda]
          Length = 160

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 9/167 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           L   I  +I P  + + ++ + ++ +  K  +L+I ++R D+  + + DC+  S+AIS +
Sbjct: 2   LNDKIKELITPTAKALGYKVINVNFV-VKPAILKIVIDRFDEKKVKVLDCQAFSKAISAV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVENII G Y LEV S GI+R ++   DF+++ G+ +  ++V +  + +K IG I    
Sbjct: 61  LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
                L  +        +  IAI +D++  A+++ TDE+ R    NY
Sbjct: 121 GQEITLNLQN-------DSTIAIDYDNIKVAKIVFTDEMFRQITKNY 160


>gi|153855239|ref|ZP_01996405.1| hypothetical protein DORLON_02419 [Dorea longicatena DSM 13814]
 gi|149752238|gb|EDM62169.1| hypothetical protein DORLON_02419 [Dorea longicatena DSM 13814]
          Length = 150

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++EE  F  V +  ++   N  L+ ++++  G + + DCE +S+ +S IL
Sbjct: 3   EQKTEEILLPIVEEYGFELVDVEYVKEGSNWYLRAYIDKP-GGIGVNDCEVVSRRLSDIL 61

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y LEVSSPG+ RP+ ++ DF R  G  V          K++  G +    E
Sbjct: 62  DEKDYIEDSYILEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRMIDRKKEFTGILKDYDE 121

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
           T   +E E   EK   + +IA+
Sbjct: 122 TTVTIEMEDETEKTFEKSEIAL 143


>gi|116333945|ref|YP_795472.1| hypothetical protein LVIS_1339 [Lactobacillus brevis ATCC 367]
 gi|122269371|sp|Q03QT1|RIMP_LACBA RecName: Full=Ribosome maturation factor rimP
 gi|116099292|gb|ABJ64441.1| hypothetical protein LVIS_1339 [Lactobacillus brevis ATCC 367]
          Length = 157

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++++ QP++ +  F  V +  ++  K+  L++++++  G + + +C  +S  +S  
Sbjct: 4   VVETVTALAQPIVAQHQFELVDVEFVKEGKSWYLRLYIDKP-GGINIEECALVSDEVSEK 62

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +D    + I   Y LEVSSPG +RP+ + +DF +  G  +   +    G+ +   G ++ 
Sbjct: 63  MDALDPDPIPQAYFLEVSSPGAERPLKKPADFEKAVGDYIHVSLYQKIGNSKVYEGTLLS 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +     LE   +G        + I  D++  ARL 
Sbjct: 123 LTADSLDLEVNLKGRIK----TLTIPRDAVAQARLA 154


>gi|298528713|ref|ZP_07016117.1| protein of unknown function DUF150 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512365|gb|EFI36267.1| protein of unknown function DUF150 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 154

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 11/156 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE---KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           +   +  ++Q     M      +  +     +  +L++FV+  +  +++  C +LS+ +S
Sbjct: 6   IKKQVEELVQTNCRLMGLEPWGMDFVPGTGKQRGVLRVFVDSPE-GVSIDQCADLSRQLS 64

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LDVE+++ G Y LEVSSPG++R   R      + GH V   +      ++   G +  
Sbjct: 65  VALDVEDLVPGSYNLEVSSPGLNRRFFRPEQMSGYTGHKVKITLKEPRDGRKNFTGTLQE 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  ++          +   +  +D +  ARL+
Sbjct: 125 AENETISIQ-------TSPDCTWSFQWDEIDRARLV 153


>gi|293115578|ref|ZP_05792144.2| putative cytoplasmic protein [Butyrivibrio crossotus DSM 2876]
 gi|292808915|gb|EFF68120.1| putative cytoplasmic protein [Butyrivibrio crossotus DSM 2876]
          Length = 166

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +     +    + +I P+IE   F  V +  ++   +  L+ ++++  G +T+ DC E+S
Sbjct: 12  MAKREDIESKATELIMPIIESCGFELVDLEYVKEGSSKYLRAYIDKP-GGITVDDCAEVS 70

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +  S  LD  + I+  Y LEVSSPG+ RP  +  DF R     V  ++       +   G
Sbjct: 71  RPFSDKLDEADFIDEAYILEVSSPGLFRPFKKDKDFERNLMEEVELKLYRQVDHLKDYTG 130

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAI 162
            +    +    +E E   EK  +   +AI
Sbjct: 131 LLKKFDKDTVTIELENGDEKTFDRSNLAI 159


>gi|315126156|ref|YP_004068159.1| hypothetical protein PSM_A1065 [Pseudoalteromonas sp. SM9913]
 gi|315014670|gb|ADT68008.1| hypothetical protein PSM_A1065 [Pseudoalteromonas sp. SM9913]
          Length = 141

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P +E + F    +  +   ++  L++++  +D  +++ +C + S+ IS ILDVE+ I
Sbjct: 1   MLTPAVEMLGFELHGLEFVQAGRHSTLRVYIAHED-GISVDNCADASRQISAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+ ++  + +  G  V     L    ++   G ++  S     L 
Sbjct: 60  TNEYDLEVSSPGVDRPLFKQDHYEQAQGEEVRVRTKLPQDGRRNFKGDLIAVSSDMITLS 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            +          +  I   ++  A +I
Sbjct: 120 SDG--------AEHLIMLSNIERANII 138


>gi|91782987|ref|YP_558193.1| hypothetical protein Bxe_A2822 [Burkholderia xenovorans LB400]
 gi|296158770|ref|ZP_06841599.1| protein of unknown function DUF150 [Burkholderia sp. Ch1-1]
 gi|123358892|sp|Q140U8|RIMP_BURXL RecName: Full=Ribosome maturation factor rimP
 gi|91686941|gb|ABE30141.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
 gi|295890975|gb|EFG70764.1| protein of unknown function DUF150 [Burkholderia sp. Ch1-1]
          Length = 152

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++    + + DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVVGLGYELVDLERTGRG--MLCIYIDQP-AGIAIEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G  V   +      ++   G +        
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEVVITLKKPLDGRKSYRGILHAPQGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE E +         +  +   +  ARL+ 
Sbjct: 117 GLEFEGKE----GAAMLDFTLADMDKARLVP 143


>gi|295396944|ref|ZP_06807066.1| protein of hypothetical function DUF150 [Aerococcus viridans ATCC
           11563]
 gi|294974797|gb|EFG50502.1| protein of hypothetical function DUF150 [Aerococcus viridans ATCC
           11563]
          Length = 179

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 7/157 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +  ++QP+IE++ F    I  ++  K+  L+I+V++  G + + DC  +S+ IS 
Sbjct: 24  KVTDQMQEIVQPIIEDLGFILFDIEFVKEGKSWFLRIYVDKPGGGIAIEDCVTVSEHISE 83

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            +D    + I   Y LEVSSPG +RP+    D     G  V      +   ++ + G+++
Sbjct: 84  AVDQLETDPIPQAYYLEVSSPGAERPLKNDDDVQAAIGEWVFLSFYQAIDGQKNIQGRLL 143

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             S+  + +E + +  K      + +   ++   RL 
Sbjct: 144 SVSDDAYEVETKDKTRKVA----VTVEKSNVSLIRLA 176


>gi|297569837|ref|YP_003691181.1| protein of unknown function DUF150 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925752|gb|ADH86562.1| protein of unknown function DUF150 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 155

 Score =  115 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 10/158 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAI 76
           +  L   +  +++PV+ +      ++    E    +L++ ++ DD  + L DC  +S+ +
Sbjct: 5   ESALIQRLHELLEPVVLDHGLELAELQFRREAPGWVLRLIIDADD-GVGLDDCTRVSREV 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +L+VE+ IE  + LEVSSPG+DRP+ R+ D++R  G +           +  +IG++ 
Sbjct: 64  SHLLEVEDPIEQAFTLEVSSPGLDRPLRRERDYVRCRGKMAKIVCTRQIEGQNVVIGRLG 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             ++    +E +           + +   ++  ARL+V
Sbjct: 124 EVADGAVTVETD--------AGPVKVPLAAVRRARLVV 153


>gi|284048696|ref|YP_003399035.1| protein of unknown function DUF150 [Acidaminococcus fermentans DSM
           20731]
 gi|283952917|gb|ADB47720.1| protein of unknown function DUF150 [Acidaminococcus fermentans DSM
           20731]
          Length = 153

 Score =  115 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 1/146 (0%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   ++ +  P++EE     V +  + E++  L++F+++  G + + DC  +S A
Sbjct: 1   MDKKKITERVTDLAAPIVEEAGLELVDVEYVRERDWFLRVFIDKA-GGIDIDDCSAVSNA 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           ++  LD E+ I+  Y LEVSSPGIDRP+ +  D     G  V          K++L   +
Sbjct: 60  LAKKLDEEDFIKEKYYLEVSSPGIDRPLKKDKDLEAHYGQKVDLAFFAPYEGKKQLTAVL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIA 161
                    LE  K+ +  +    IA
Sbjct: 120 KSHDAEKLVLEDAKKKKLAIERKLIA 145


>gi|292669519|ref|ZP_06602945.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292648842|gb|EFF66814.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 163

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 15/173 (8%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVER 59
           M +  F+   YE R      +   +  + + ++ +      V +  + E++  L+I++++
Sbjct: 1   MRTHSFIT--YEKRESMSAKIEERVEEIARGLLVDAPELELVDVEYVRERDWYLRIYIDK 58

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
            +G + + DC+ LS+ +  +LD E+ I   Y LEVSSPG+DR + +  DF R  G  V  
Sbjct: 59  -EGGIDIEDCQGLSERLEEMLDREDFIPDAYILEVSSPGLDRVLRKPRDFEREQGKAVDV 117

Query: 120 EIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +      K++  G + G       L+             I I  D +   RL
Sbjct: 118 TLYAPFEGKKQWTGTLAGYDGEMLTLDDG-----------IRIPLDQISQIRL 159


>gi|82702987|ref|YP_412553.1| hypothetical protein Nmul_A1866 [Nitrosospira multiformis ATCC
           25196]
 gi|91208392|sp|Q2Y7W0|RIMP_NITMU RecName: Full=Ribosome maturation factor rimP
 gi|82411052|gb|ABB75161.1| Protein of unknown function DUF150 [Nitrosospira multiformis ATCC
           25196]
          Length = 142

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 12/151 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++P +  + +  V +        LL+IF+++  G + + DC  +S  +S  L VE
Sbjct: 2   DLYELLEPTLAGLGYELVDLERSPG-GKLLRIFIDKP-GGVNVDDCVTVSNHLSRFLAVE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   + RLEVSSPG+DRP+ + +DF+R+ G  V   + ++   ++  +G +    +   
Sbjct: 60  NV--DYDRLEVSSPGLDRPLKKTADFIRFAGESVKLRLRVALQGQRNFVGILREVKDGIL 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE + +         + +   +L   RL+ 
Sbjct: 118 KLEVDGKM--------LDLELTNLEKVRLVP 140


>gi|238927233|ref|ZP_04658993.1| protein of hypothetical function DUF150 [Selenomonas flueggei ATCC
           43531]
 gi|238884908|gb|EEQ48546.1| protein of hypothetical function DUF150 [Selenomonas flueggei ATCC
           43531]
          Length = 163

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 82/173 (47%), Gaps = 15/173 (8%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVER 59
           ME+  F+   YE R      +   +  +++ ++ ++ +   V +  ++E++  L++++++
Sbjct: 1   MEAHSFIT--YEKRESMSAKIEERVEEMVRGLLTDLPAIELVDVEYVKERDSYLRVYIDK 58

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
             G + + DC+ LS+ +  +LD E+ I   Y LEVSSPG+DR + ++ DF R +G  V  
Sbjct: 59  -TGGIDIDDCQSLSERLEEMLDREDFIPDAYILEVSSPGLDRVLRKERDFTREHGRTVDV 117

Query: 120 EIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +      K++  G + G       L+             + I    +   RL
Sbjct: 118 TLYAPFEGKKQWTGTLAGYDGETLTLDDG-----------VQIPMKQVSQVRL 159


>gi|222529040|ref|YP_002572922.1| hypothetical protein Athe_1048 [Caldicellulosiruptor bescii DSM
           6725]
 gi|254799910|sp|B9MR45|RIMP_ANATD RecName: Full=Ribosome maturation factor rimP
 gi|222455887|gb|ACM60149.1| protein of unknown function DUF150 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 151

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  +++P++E   F  V I   +  K+  L++++++  G +T+ DC+ +S+ +S
Sbjct: 2   SKITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ ++ G+++ 
Sbjct: 61  EKLDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGKVVDVFLNQPFLNRTRITGELVE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +E    L  +K          I I  +++   +L 
Sbjct: 121 KNEKSLILIVDKEK--------IVIPIENIKKVKLA 148


>gi|188996514|ref|YP_001930765.1| protein of unknown function DUF150 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|259645122|sp|B2V8D8|RIMP_SULSY RecName: Full=Ribosome maturation factor rimP
 gi|188931581|gb|ACD66211.1| protein of unknown function DUF150 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 147

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   +  ++ P++EE  F+ V I  +  K  +L+I++   +   ++ DCE +S+ I  
Sbjct: 1   MKVEEKVKELLLPILEERDFKLVDIEFIPSKRPILRIYIYNPE-GTSIDDCEWVSKRIGA 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE++I+  Y LEVSSPG+DR      ++  + G  V  +      +K+   G ++G 
Sbjct: 60  LLDVEDLIDKAYILEVSSPGLDRKFKNIEEYDIFKGRDVVVKTKEPINEKKVFKGTLLGL 119

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    +          NE  + I F+++   +L  
Sbjct: 120 EDEKVKI--------KENEETVEIPFENVSQTKLDF 147


>gi|153954052|ref|YP_001394817.1| hypothetical protein CKL_1427 [Clostridium kluyveri DSM 555]
 gi|219854665|ref|YP_002471787.1| hypothetical protein CKR_1322 [Clostridium kluyveri NBRC 12016]
 gi|189038691|sp|A5N838|RIMP_CLOK5 RecName: Full=Ribosome maturation factor rimP
 gi|254800038|sp|B9E1J8|RIMP_CLOK1 RecName: Full=Ribosome maturation factor rimP
 gi|146346933|gb|EDK33469.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219568389|dbj|BAH06373.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 154

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 11/159 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +I+P+++ ++F    +       N  L+IF+++++GN++L DCE +S+A+S I
Sbjct: 6   LVERVLKLIKPIVDNLNFELYHLEFKREGNNNYLRIFIDKEEGNISLEDCEAVSRAVSDI 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E+ I   Y LEVSSPGI+R +       R+ G  V   I      K+K  GK++   
Sbjct: 66  LDREDPIRDPYYLEVSSPGIERTLYTHEHLKRYIGFNVIVNIQGLLKGKKKYQGKLLSFD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDEL 178
           E+   +  E          +I I    + +  L   D+L
Sbjct: 126 ESVLRVSCEGE--------EIVIPKSKISTVNL--KDDL 154


>gi|325267088|ref|ZP_08133757.1| protein of hypothetical function DUF150 [Kingella denitrificans
           ATCC 33394]
 gi|324981441|gb|EGC17084.1| protein of hypothetical function DUF150 [Kingella denitrificans
           ATCC 33394]
          Length = 145

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 76/149 (51%), Gaps = 11/149 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +  M +  V + L  +   +L++F+++ +G +T+ DC  +S  +S +  VE
Sbjct: 2   DLQQILETTLPGMGYELVDVELTAQG--ILRVFIDK-EGGITVEDCATVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           ++   +  LE+SSPG+DRP+ + +DF+R+ G +V  +  L    ++  IG+I    E   
Sbjct: 59  DV--DYKHLEISSPGLDRPLKKAADFVRFTGSMVKLKTRLPVDGQKNFIGRIESFDEAAQ 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +          +     I   ++  AR+
Sbjct: 117 TIVL------AFDGKTAQIELSNVDKARI 139


>gi|154497679|ref|ZP_02036057.1| hypothetical protein BACCAP_01655 [Bacteroides capillosus ATCC
           29799]
 gi|150273177|gb|EDN00322.1| hypothetical protein BACCAP_01655 [Bacteroides capillosus ATCC
           29799]
          Length = 151

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 10/156 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + ++ QP+  E       +  + E     L++++++ +G + + DCE +S+ +S 
Sbjct: 3   KVTELVRALAQPIAAENGCSIWDVEYVREAGTWFLRVYLDK-EGGVNIDDCEAVSRPLSD 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + IEG Y LEVSS GIDR +     F  + G  V   +      ++  +G +   
Sbjct: 62  ALDEADPIEGSYTLEVSSAGIDRVLRHPEHFDAFLGAEVEVRLYRPVEGRKDHVGLLKAY 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 +              +      +   RL V
Sbjct: 122 DNGDVTVTL--------PSGDVTFPKKDVAQVRLYV 149


>gi|315165483|gb|EFU09500.1| UPF0090 family protein [Enterococcus faecalis TX1302]
          Length = 185

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 77/154 (50%), Gaps = 8/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL- 80
             ++ ++ P++EE +F  V++  ++  KN  L++F+++ +G + + +C  +S+ +S  L 
Sbjct: 34  ETVTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDK-EGGIDIEECAFVSEKLSEKLD 92

Query: 81  -DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
               + I   Y LEVSSPG +RP+ ++SD+ +  G  +   +  +   ++++ G ++   
Sbjct: 93  AMDPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQIEGTLVHLD 152

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L      +      ++     ++  ARL 
Sbjct: 153 SEQLTLSV----KIKTRVNEMTFERKNIAKARLA 182


>gi|262197039|ref|YP_003268248.1| hypothetical protein Hoch_3856 [Haliangium ochraceum DSM 14365]
 gi|262080386|gb|ACY16355.1| protein of unknown function DUF150 [Haliangium ochraceum DSM 14365]
          Length = 209

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 27/180 (15%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER-------------D 60
           +  +  +   +  + +PV     +  V +SL + +   L+Q+F++              +
Sbjct: 26  MRANDSMTEQLMRIAEPVCASAGYELVDLSLTQSRVGWLVQVFIDHMHSDETSTVAGGEE 85

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
              ++L DCE +S+ +S +LDVE+ +   Y LEVSSPG+DRP+   + F R+ GH V   
Sbjct: 86  ASEVSLEDCEHVSRELSAVLDVEDPLPFAYNLEVSSPGLDRPLRTVAHFQRFAGHEVKVR 145

Query: 121 IVLSSG--DKQKLIGKIMGTSET---GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +  +     ++   G++   S        +  +             +  D + SAR++  
Sbjct: 146 LDGTGDATGRRNFKGRLEAVSAEAPASIVVNVDGAPH--------TLLIDDIESARVVPD 197


>gi|257869191|ref|ZP_05648844.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257803355|gb|EEV32177.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 157

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 31  PVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI--IE 87
           P++E  +F  V++  ++  K+  L++F+++ +G + + +C  +S+ +S  LD  +   I 
Sbjct: 14  PILEAQNFELVEVEFVKEGKSWFLRVFIDK-EGGIDIEECAFVSEQLSDKLDACDPDPIP 72

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LEVSSPG +RP+ ++ D+ R  G  +   +      +++  G +    E    ++ 
Sbjct: 73  QAYFLEVSSPGAERPLKKEEDYHRAVGEYIHLSLYQPVEGEKQFEGFLQSFDEEQLVIKI 132

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
                    E ++ I   ++  ARL 
Sbjct: 133 ----RIKTREKELTIERKNIAKARLA 154


>gi|148263955|ref|YP_001230661.1| hypothetical protein Gura_1898 [Geobacter uraniireducens Rf4]
 gi|189030115|sp|A5GF83|RIMP_GEOUR RecName: Full=Ribosome maturation factor rimP
 gi|146397455|gb|ABQ26088.1| protein of unknown function DUF150 [Geobacter uraniireducens Rf4]
          Length = 159

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 14/165 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ + + VI  +    V +    E   ++L++FV++ +G + L DC  +S+
Sbjct: 1   MAKVDVISRVTVLAEQVISSLGMELVDLEYKREGREMVLRLFVDK-EGGVNLDDCASVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-----GDKQ 129
            +S +LDVE++I  HY LEVSSPGIDRP+ +  DF R+ G +V               ++
Sbjct: 60  ELSEVLDVEDVISEHYSLEVSSPGIDRPLKKVEDFQRFKGRLVKIRTFEPLPDDAGNKRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +G++ G       +  +            AI F+ +  A L  
Sbjct: 120 TFLGELKGIENGVVLVALK-------EGQNAAIPFEKVAKANLEF 157


>gi|312622704|ref|YP_004024317.1| hypothetical protein Calkro_1646 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203171|gb|ADQ46498.1| protein of unknown function DUF150 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 151

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  +++P++E   F  V I   +  K+  L++++++  G +T+ DC+ +S+ +S
Sbjct: 2   SKITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+ + I   Y LEVSSPG+DRP+V   DF+R  G VV   +     ++ ++ G+++ 
Sbjct: 61  EKLDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGKVVDVFLNQPFLNRTRITGELVE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +E    L  +K          I I  +++   +L 
Sbjct: 121 KNEKSLILIVDKEK--------IVIPVENIKKVKLA 148


>gi|227518529|ref|ZP_03948578.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX0104]
 gi|227553055|ref|ZP_03983104.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           HH22]
 gi|229546054|ref|ZP_04434779.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX1322]
 gi|229550244|ref|ZP_04438969.1| protein of hypothetical function DUF150 [Enterococcus faecalis ATCC
           29200]
 gi|293383161|ref|ZP_06629078.1| UPF0090 protein [Enterococcus faecalis R712]
 gi|293387685|ref|ZP_06632230.1| UPF0090 protein [Enterococcus faecalis S613]
 gi|307268538|ref|ZP_07549911.1| UPF0090 family protein [Enterococcus faecalis TX4248]
 gi|307273443|ref|ZP_07554688.1| UPF0090 family protein [Enterococcus faecalis TX0855]
 gi|307277606|ref|ZP_07558698.1| UPF0090 family protein [Enterococcus faecalis TX2134]
 gi|307279084|ref|ZP_07560142.1| UPF0090 family protein [Enterococcus faecalis TX0860]
 gi|307288431|ref|ZP_07568419.1| UPF0090 family protein [Enterococcus faecalis TX0109]
 gi|307291250|ref|ZP_07571134.1| UPF0090 family protein [Enterococcus faecalis TX0411]
 gi|312899342|ref|ZP_07758675.1| UPF0090 family protein [Enterococcus faecalis TX0470]
 gi|312904019|ref|ZP_07763187.1| UPF0090 family protein [Enterococcus faecalis TX0635]
 gi|312907250|ref|ZP_07766241.1| UPF0090 family protein [Enterococcus faecalis DAPTO 512]
 gi|312909868|ref|ZP_07768716.1| SP14.3 family protein [Enterococcus faecalis DAPTO 516]
 gi|312952266|ref|ZP_07771141.1| UPF0090 family protein [Enterococcus faecalis TX0102]
 gi|227074011|gb|EEI11974.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX0104]
 gi|227177798|gb|EEI58770.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           HH22]
 gi|229304682|gb|EEN70678.1| protein of hypothetical function DUF150 [Enterococcus faecalis ATCC
           29200]
 gi|229308827|gb|EEN74814.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           TX1322]
 gi|291079500|gb|EFE16864.1| UPF0090 protein [Enterococcus faecalis R712]
 gi|291082874|gb|EFE19837.1| UPF0090 protein [Enterococcus faecalis S613]
 gi|306497481|gb|EFM67014.1| UPF0090 family protein [Enterococcus faecalis TX0411]
 gi|306500602|gb|EFM69931.1| UPF0090 family protein [Enterococcus faecalis TX0109]
 gi|306504209|gb|EFM73421.1| UPF0090 family protein [Enterococcus faecalis TX0860]
 gi|306505871|gb|EFM75049.1| UPF0090 family protein [Enterococcus faecalis TX2134]
 gi|306509970|gb|EFM78995.1| UPF0090 family protein [Enterococcus faecalis TX0855]
 gi|306515134|gb|EFM83676.1| UPF0090 family protein [Enterococcus faecalis TX4248]
 gi|310626278|gb|EFQ09561.1| UPF0090 family protein [Enterococcus faecalis DAPTO 512]
 gi|310629650|gb|EFQ12933.1| UPF0090 family protein [Enterococcus faecalis TX0102]
 gi|310632495|gb|EFQ15778.1| UPF0090 family protein [Enterococcus faecalis TX0635]
 gi|311289826|gb|EFQ68382.1| SP14.3 family protein [Enterococcus faecalis DAPTO 516]
 gi|311293493|gb|EFQ72049.1| UPF0090 family protein [Enterococcus faecalis TX0470]
 gi|315027495|gb|EFT39427.1| UPF0090 family protein [Enterococcus faecalis TX2137]
 gi|315030926|gb|EFT42858.1| UPF0090 family protein [Enterococcus faecalis TX4000]
 gi|315034082|gb|EFT46014.1| UPF0090 family protein [Enterococcus faecalis TX0017]
 gi|315036750|gb|EFT48682.1| UPF0090 family protein [Enterococcus faecalis TX0027]
 gi|315145576|gb|EFT89592.1| UPF0090 family protein [Enterococcus faecalis TX2141]
 gi|315147749|gb|EFT91765.1| UPF0090 family protein [Enterococcus faecalis TX4244]
 gi|315151450|gb|EFT95466.1| UPF0090 family protein [Enterococcus faecalis TX0012]
 gi|315153229|gb|EFT97245.1| UPF0090 family protein [Enterococcus faecalis TX0031]
 gi|315155992|gb|EFU00009.1| UPF0090 family protein [Enterococcus faecalis TX0043]
 gi|315157836|gb|EFU01853.1| UPF0090 family protein [Enterococcus faecalis TX0312]
 gi|315160338|gb|EFU04355.1| UPF0090 family protein [Enterococcus faecalis TX0645]
 gi|315166761|gb|EFU10778.1| UPF0090 family protein [Enterococcus faecalis TX1341]
 gi|315169948|gb|EFU13965.1| UPF0090 family protein [Enterococcus faecalis TX1342]
 gi|315174356|gb|EFU18373.1| UPF0090 family protein [Enterococcus faecalis TX1346]
 gi|315575676|gb|EFU87867.1| UPF0090 family protein [Enterococcus faecalis TX0309B]
 gi|315578366|gb|EFU90557.1| UPF0090 family protein [Enterococcus faecalis TX0630]
 gi|315579880|gb|EFU92071.1| UPF0090 family protein [Enterococcus faecalis TX0309A]
 gi|327534891|gb|AEA93725.1| protein of hypothetical function DUF150 [Enterococcus faecalis
           OG1RF]
 gi|329577095|gb|EGG58568.1| hypothetical protein HMPREF9520_01115 [Enterococcus faecalis
           TX1467]
          Length = 185

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 77/154 (50%), Gaps = 8/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL- 80
             ++ ++ P++EE +F  V++  ++  KN  L++F+++ +G + + +C  +S+ +S  L 
Sbjct: 34  ETVTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDK-EGGIDIEECAFVSEKLSEKLD 92

Query: 81  -DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
               + I   Y LEVSSPG +RP+ ++SD+ +  G  +   +  +   ++++ G ++   
Sbjct: 93  AMDPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQIEGTLVHLD 152

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L      +      ++     ++  ARL 
Sbjct: 153 SEQLTLSV----KIKTRVKEMTFERKNIAKARLA 182


>gi|189424725|ref|YP_001951902.1| hypothetical protein Glov_1666 [Geobacter lovleyi SZ]
 gi|226736404|sp|B3EAE4|RIMP_GEOLS RecName: Full=Ribosome maturation factor rimP
 gi|189420984|gb|ACD95382.1| protein of unknown function DUF150 [Geobacter lovleyi SZ]
          Length = 159

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 14/165 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                    + +++QP+++ M    V++   +  ++ LL++F+++ D  + L DC E+S+
Sbjct: 1   MSATDPIQRVETLLQPILDAMGLELVELEFKKVGRSYLLRVFIDKPD-GVNLDDCAEVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
            +S  LDVE+ I   Y LEVSSPG+DRP+ ++ DF+R+ G +   +      D     ++
Sbjct: 60  ELSVQLDVEDCIASRYTLEVSSPGLDRPLKKEQDFIRYQGRLAVVKTTELLKDEKGSPRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +G + G  +    +  +          Q  I +D +  A L  
Sbjct: 120 TFLGFLEGVEDGEVMIRLK-------EGPQARIPWDKIAKAHLEF 157


>gi|325265379|ref|ZP_08132103.1| hypothetical protein HMPREF0240_04394 [Clostridium sp. D5]
 gi|324029380|gb|EGB90671.1| hypothetical protein HMPREF0240_04394 [Clostridium sp. D5]
          Length = 155

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +++P++  + F  V +  ++E     L+ ++++  G +T+ DCE +S+  S IL
Sbjct: 8   EQQTEELLEPIVTGVGFELVDVEYVKEAGTWYLRAYIDKP-GGITVDDCEAVSRKFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y  EVSSPG+ RP+ ++ D+ R  G  V  +   +   +++ +G +    +
Sbjct: 67  DEKDYIEDTYIFEVSSPGLGRPLKKEKDYRRSLGEEVEIKTYRAIDRQKEFVGILKDYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    +   + +IA+
Sbjct: 127 DTVTIEYEDETTQVFEKSEIAL 148


>gi|332653589|ref|ZP_08419334.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
 gi|332518735|gb|EGJ48338.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
          Length = 151

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 2/140 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
            +    + + QP +E        +  ++E     L+ ++++ +G +++ DCE +S+ +S 
Sbjct: 3   KVTEMAAQLAQPFVEAAGCSLWDVEYVKEAGEWYLRFYIDK-EGGVSINDCEAVSRPLSD 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + IEG Y LEVSS G DR + +   F ++ G  V  ++  +   ++  +G +   
Sbjct: 62  ALDEADPIEGSYTLEVSSAGADRALKKPEHFAQFQGAEVEVKLYRARDGRKDYVGLLESY 121

Query: 139 SETGFFLEKEKRGEKDMNEL 158
            +    L       K   + 
Sbjct: 122 EDGDVTLNVGGAPMKFEKKE 141


>gi|218665765|ref|YP_002424885.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|259585659|sp|B7J4D2|RIMP_ACIF2 RecName: Full=Ribosome maturation factor rimP
 gi|218517978|gb|ACK78564.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 150

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGN-MTLRDCEELSQAISP 78
           +   +   I           V   ++     + LQ+F+E+D+   +T+ DC  +S+ +S 
Sbjct: 1   MEDRLYEGIAQQAGIAGCTLVDARMVRTGRAVALQVFIEKDETTAVTIEDCAAVSRQLSL 60

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDVEN I G YRLEVSSPG+DRP+    DF R+ G      +   +  +++L G+++G 
Sbjct: 61  WLDVENPIHGAYRLEVSSPGLDRPLKNLHDFERFKGSQAEIHLHGLTQGRRRLQGELLGV 120

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    L           E +   + D +  ARL+ 
Sbjct: 121 EDQKIVL--------KNAEGRWTFALDDIHKARLVP 148


>gi|95929629|ref|ZP_01312371.1| protein of unknown function DUF150 [Desulfuromonas acetoxidans DSM
           684]
 gi|95134326|gb|EAT15983.1| protein of unknown function DUF150 [Desulfuromonas acetoxidans DSM
           684]
          Length = 187

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 13/164 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
             D  +   +  + +P++EE     V I    +    LL++F+++  G + L DC + S+
Sbjct: 26  MSDEAVLNKVIELAEPILEEQGLELVDIEFFSQGSEWLLRLFIDKP-GGVNLDDCADCSR 84

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------DK 128
            +S ILDVE +IE  YRLEVSSPGIDRP+ +++DF R+ G +V  + + +         +
Sbjct: 85  ELSLILDVEEVIEVAYRLEVSSPGIDRPLKKEADFERFKGEMVRAKTLQAIDPDLRGYQR 144

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +  IG+++G  +   F+E+  +        ++ +  DSL +  L
Sbjct: 145 KTFIGELLGLEDDVVFIEQNDK-----EGGRVELPLDSLETINL 183


>gi|326388031|ref|ZP_08209635.1| hypothetical protein Y88_0399 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207532|gb|EGD58345.1| hypothetical protein Y88_0399 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 197

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 17/177 (9%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISL-----LEEKNLLLQIFVERDDGN-MTLRDCE 70
             M     I  V++P  + + F  V+++L     + ++   LQ+  ER +   + + DC 
Sbjct: 10  VRMADIARIIEVVEPEAKALGFDLVRVALFGKTEVGDEEHTLQVMAERPETGQLLIEDCA 69

Query: 71  ELSQAISPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           ELS+ IS  +D      E++IE  YRLEVSSPGIDRP+ R  DF  W GH    E+    
Sbjct: 70  ELSRRISDRMDQLEEAGEDLIEDAYRLEVSSPGIDRPLTRPKDFAGWVGHEARIELKDLI 129

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
             +++  G+++G       +  E+      + +  A+ FD +  A+L++TD+L+ AS
Sbjct: 130 DRRKRYRGELVGFDPATNTISIEE------DAVVYAVPFDLVAHAKLVLTDKLIAAS 180


>gi|187933637|ref|YP_001885467.1| hypothetical protein CLL_A1269 [Clostridium botulinum B str. Eklund
           17B]
 gi|226695891|sp|B2TJ51|RIMP_CLOBB RecName: Full=Ribosome maturation factor rimP
 gi|187721790|gb|ACD23011.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 153

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                L   +  +++P++EE+S+    +  ++E     L+I++++++ +++L DCE++S+
Sbjct: 1   MRKDMLLEKVEVLVKPIVEELSYELYYLEYVKENGEYYLRIYIDKEEDSISLNDCEKVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ILDVE+ IE  Y LEVSSPG++R + ++  F ++ G  V      S    +K+ G 
Sbjct: 61  RVSEILDVEDPIEDSYYLEVSSPGLNRGLYKEEHFKKFIGREVLVRFNGSLEGMKKIQGI 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +         ++ EK+         + I  + +  A L
Sbjct: 121 LKEADNEFITVQGEKK---------LKIPTEKIKGANL 149


>gi|251780527|ref|ZP_04823447.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084842|gb|EES50732.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 153

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                L   +  +++P++EE+S+    +  ++E     L+I++++++ +++L DCE++S+
Sbjct: 1   MRKDMLLEKVEVLVKPIVEELSYELYYLEYVKENGEYYLRIYIDKEEDSISLNDCEKVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S +LDVE+ IE  Y LEVSSPG++R + ++  F ++ G  V      S    +K+ G 
Sbjct: 61  RVSEMLDVEDPIEDSYYLEVSSPGLNRGLYKEEHFKKFIGREVLVRFNGSLEGMKKIQGI 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +         +E EK         ++ I  + +  A L
Sbjct: 121 LKDADNEFITVEAEK---------ELKIPTEKIKGANL 149


>gi|188589052|ref|YP_001920614.1| hypothetical protein CLH_1220 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|226696282|sp|B2V4G5|RIMP_CLOBA RecName: Full=Ribosome maturation factor rimP
 gi|188499333|gb|ACD52469.1| conserved hypothetical protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 153

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                L   +  +++P++EE+S+    +  ++E     L+I++++++ +++L DCE++S+
Sbjct: 1   MRKDMLLEKVEVLVKPIVEELSYELYYLEYVKENGEYYLRIYIDKEEDSISLNDCEKVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ILDVE+ IE  Y LEVSSPG++R + ++  F ++ G  V      S    +K+ G 
Sbjct: 61  RVSEILDVEDPIEDSYYLEVSSPGLNRGLYKEEHFKKFIGREVLVRFNGSLEGMKKIQGI 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +         +E          E ++ I  + +  A L
Sbjct: 121 LKEAENEFITVE---------GEKELKIPTEKIKGANL 149


>gi|257452236|ref|ZP_05617535.1| putative cytoplasmic protein [Fusobacterium sp. 3_1_5R]
 gi|317058779|ref|ZP_07923264.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
 gi|313684455|gb|EFS21290.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
          Length = 153

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 11/162 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   I  ++ P  EE+    V +  +++     ++++VE+ +G++ L DC  LS  I 
Sbjct: 2   ESVVQKIEKIVIPAAEELGLSLVDVEYMQDGGYWYVRVYVEKLEGDVNLEDCASLSGKIE 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
               V+ +I+  + LEVSSPGI+RP+ ++SDF+R+ G  +   +     +K+ + G +  
Sbjct: 62  D--AVDQLIDKKFFLEVSSPGIERPLKKESDFIRFTGEKIFVALKHKLNEKRNIEGILRA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
                  LE +          ++ I F  +  A L+   +  
Sbjct: 120 YENQSLLLEVDGE--------ELQIPFSEVKKAHLVFDFDEF 153


>gi|170696461|ref|ZP_02887587.1| protein of unknown function DUF150 [Burkholderia graminis C4D1M]
 gi|209520194|ref|ZP_03268965.1| protein of unknown function DUF150 [Burkholderia sp. H160]
 gi|295676259|ref|YP_003604783.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1002]
 gi|307730030|ref|YP_003907254.1| hypothetical protein BC1003_2000 [Burkholderia sp. CCGE1003]
 gi|323525723|ref|YP_004227876.1| hypothetical protein BC1001_1380 [Burkholderia sp. CCGE1001]
 gi|170138614|gb|EDT06816.1| protein of unknown function DUF150 [Burkholderia graminis C4D1M]
 gi|209499353|gb|EDZ99437.1| protein of unknown function DUF150 [Burkholderia sp. H160]
 gi|295436102|gb|ADG15272.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1002]
 gi|307584565|gb|ADN57963.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1003]
 gi|323382725|gb|ADX54816.1| protein of unknown function DUF150 [Burkholderia sp. CCGE1001]
          Length = 152

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 9/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            ++ +I+  +  + +  V +        +L I++++    + + DCE++++ +  +L VE
Sbjct: 2   QLTELIETTVVGLGYELVDLERTGRG--MLCIYIDQP-AGIAIEDCEKVTRQLQHVLTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ + +DF R+ G      +      ++   G +        
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKLADFERFAGSEAVITLKKPLDGRKSYRGILHAPQGETI 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            LE E +         +  +   +  ARL+ 
Sbjct: 117 GLEFEGKE----GAAMLDFTLADMDKARLVP 143


>gi|226313024|ref|YP_002772918.1| hypothetical protein BBR47_34370 [Brevibacillus brevis NBRC 100599]
 gi|254801675|sp|C0ZF55|RIMP_BREBN RecName: Full=Ribosome maturation factor rimP
 gi|226095972|dbj|BAH44414.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 152

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 9/154 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             + G ++ +I P++EE+    V I   +   N  L++F++ + GN+ + DC  +S+ +S
Sbjct: 2   SKVTGIVTELITPIVEEVGLELVDIEYKKEGSNWFLRVFIDNETGNIDIDDCRLVSEKLS 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I   Y LEVSSPG +RP+ +  DF +  G  V               G+++ 
Sbjct: 62  EKLDEVDPIPTAYFLEVSSPGAERPLRKDKDFTKAVGRNVHITTKEPIEGATTFEGELVS 121

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             +    +           +    IS + + +AR
Sbjct: 122 YEDGKLTV--------KEAKKTYVISQEQIDTAR 147


>gi|158320556|ref|YP_001513063.1| hypothetical protein Clos_1524 [Alkaliphilus oremlandii OhILAs]
 gi|259585693|sp|A8MHI0|RIMP_ALKOO RecName: Full=Ribosome maturation factor rimP
 gi|158140755|gb|ABW19067.1| protein of unknown function DUF150 [Alkaliphilus oremlandii OhILAs]
          Length = 154

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 81/148 (54%), Gaps = 2/148 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +      ++ P+I+  +F  V +   +   N  L+I++++  G +TL DC+++S+
Sbjct: 1   MAKNRVEKITERLVMPIIQNENFELVDLEYKKEGSNWYLRIYIDKP-GGITLDDCQKVSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +   LD E+ I  +Y LEVSSPG+DRP+ + SDF+R+ G +V  ++  +    + + G+
Sbjct: 60  QLGEELDREDPISENYFLEVSSPGLDRPLKKDSDFIRFAGEIVEVKLYEALNGNKVIEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAI 162
           ++G  E    +     G  ++ + ++A+
Sbjct: 120 LVGLEENMIKINVANVGLLELPKEKVAL 147


>gi|163791588|ref|ZP_02185989.1| hypothetical protein CAT7_03409 [Carnobacterium sp. AT7]
 gi|159873137|gb|EDP67240.1| hypothetical protein CAT7_03409 [Carnobacterium sp. AT7]
          Length = 157

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++QP++E   F  V I  ++E  N  L++++++ +  + L DC  +S+ IS
Sbjct: 2   SNVVETVTEIVQPIVERNQFELVDIEFVKEGQNWFLRVYIDKPE-GIDLEDCALVSEQIS 60

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             +D    + I   Y LEVSSPG +RP+ ++ D+    G  +   +      ++   G +
Sbjct: 61  QHMDKIDPDPIPQAYFLEVSSPGAERPLKKEQDYTDSIGEYIHISLYEPVDGEKVYEGTL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    L              I  S   +  AR
Sbjct: 121 KEVNDETLTLTI----RVKTRVKDIDFSRKIIAKAR 152


>gi|262374025|ref|ZP_06067302.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262311036|gb|EEY92123.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 174

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-------------- 60
                 +  +  +I P +         I  L   K  LL+I++++               
Sbjct: 1   MKLSNKSQALHDLIAPAVAACGVDLWGIEFLPQGKRSLLRIYIDKPVDENAEPILNEDGE 60

Query: 61  ---DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  + +    + G  V
Sbjct: 61  LEQGRGIGVQDCVLVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLNQLPAYIGQQV 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E  G+       + I  +++  A LI  D
Sbjct: 121 ALRLIAAVENRRKFQAKLLSVDLENELIQVEVEGK-----HVLEIDSNNIDKANLIYQD 174


>gi|317484450|ref|ZP_07943363.1| hypothetical protein HMPREF0179_00714 [Bilophila wadsworthia 3_1_6]
 gi|316924310|gb|EFV45483.1| hypothetical protein HMPREF0179_00714 [Bilophila wadsworthia 3_1_6]
          Length = 205

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 20/178 (11%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-------------RDD- 61
                    I+ ++ P+   +      + L      + +I+V+              DD 
Sbjct: 1   MSQPDRIEFITELVTPLAASLGLAVWGVELGGAARPIARIYVDVLPGAEPAPSEKASDDD 60

Query: 62  ---GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
                +T+  C ELS+     LDVE+    ++ LE+SSPG+ RP  +      + G  + 
Sbjct: 61  LLPQGVTIDQCAELSRLAGLALDVEDPFATNWTLEISSPGLQRPFFKIDQLRNYVGRELE 120

Query: 119 CEIVLSSG---DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +         ++K  G +   ++  F L       K     ++ I++  +  A L+
Sbjct: 121 VVLAAPLDTWPGRKKFSGVLAAVADEEFTLSLPDTSRKAEEPEEVTIAWPFVRKATLV 178


>gi|18310672|ref|NP_562606.1| hypothetical protein CPE1690 [Clostridium perfringens str. 13]
 gi|110799296|ref|YP_696377.1| hypothetical protein CPF_1944 [Clostridium perfringens ATCC 13124]
 gi|168211422|ref|ZP_02637047.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|168214477|ref|ZP_02640102.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
 gi|168216977|ref|ZP_02642602.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
 gi|182626379|ref|ZP_02954133.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|34223128|sp|Q8XJR4|RIMP_CLOPE RecName: Full=Ribosome maturation factor rimP
 gi|122958819|sp|Q0TPR3|RIMP_CLOP1 RecName: Full=Ribosome maturation factor rimP
 gi|18145353|dbj|BAB81396.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|110673943|gb|ABG82930.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
 gi|170710586|gb|EDT22768.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|170714055|gb|EDT26237.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
 gi|177908330|gb|EDT70878.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|182380875|gb|EDT78354.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
          Length = 154

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                L  D+ ++  P+++E  +    I  ++E N   L++++E+ +  ++LRDCE +S+
Sbjct: 1   MKKEQLVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD+E+ I+  Y LEVSSPG++R +     F R+ G  V      S   ++ + G 
Sbjct: 61  ALSDMLDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEVFVGFKSSLSGRKNVKGI 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    E    +E E          +I +  D + +A L
Sbjct: 121 LKDVQENEIIVECEG--------NEIKVPKDKIKTANL 150


>gi|20807844|ref|NP_623015.1| hypothetical protein TTE1397 [Thermoanaerobacter tengcongensis MB4]
 gi|34222922|sp|Q8RA33|RIMP_THETN RecName: Full=Ribosome maturation factor rimP
 gi|20516406|gb|AAM24619.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 151

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 2/136 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +      ++ P++EE +F  V +   +  K+  L++++++ +G +TL DC+ +S+ +S
Sbjct: 2   SRIEEITKELVMPILEENNFELVDVEYKKEGKHWYLRVYIDK-EGGITLDDCQLVSEYLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I+  Y LEVSSPG+DRP+    DF R  G  V   +      ++K  G+++ 
Sbjct: 61  DRLDEVDPIDHSYILEVSSPGLDRPLKTPRDFKRNLGKEVEVSLYQPIDKRKKFTGELLE 120

Query: 138 TSETGFFLEKEKRGEK 153
            +     L  E    +
Sbjct: 121 FTGDKIILLCEGEKRE 136


>gi|148284845|ref|YP_001248935.1| hypothetical protein OTBS_1566 [Orientia tsutsugamushi str.
           Boryong]
 gi|254800562|sp|A5CEN4|RIMP_ORITB RecName: Full=Ribosome maturation factor rimP
 gi|146740284|emb|CAM80659.1| conserved hypothetical protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 160

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 9/167 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPI 79
           L   I  +I P  + + ++ + +S +  K  +L+I ++R D+  + + DC+  S+AIS +
Sbjct: 2   LNDKIKELITPTAKTLGYKVINVSFI-VKPAILKIVIDRFDEKKVNVLDCQVFSKAISAV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVENII G Y LEV S GI+R ++   DF+++ G+ +  ++V +  + +K IG I    
Sbjct: 61  LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK 120

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
                L  +        +  IAI +D++  A+++ TDE+ R    NY
Sbjct: 121 GQEITLNLQN-------DSTIAIDYDNIKVAKIVFTDEMFRQITKNY 160


>gi|304384866|ref|ZP_07367212.1| protein of hypothetical function DUF150 [Pediococcus acidilactici
           DSM 20284]
 gi|304329060|gb|EFL96280.1| protein of hypothetical function DUF150 [Pediococcus acidilactici
           DSM 20284]
          Length = 168

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   I+ + +PVIE   F+ V++  ++E     L+ ++++  G + + +C  +S  +S
Sbjct: 13  SNVVEKITELARPVIESHDFQLVEVEFVKEGQGWFLRFYIDKV-GGINIEECAMVSDELS 71

Query: 78  PILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
            +LD +  + I   Y LEVSSPG +RP+  K D     G  +   +  S   ++   G +
Sbjct: 72  ELLDQQDPDPIPQAYFLEVSSPGAERPLKTKEDLAAAVGEYIHISLYASINKQKVFEGYL 131

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    L+   +        ++ ++++ +  ARL 
Sbjct: 132 KSFENDELVLDYLDK----TRHKELKVAYNQVAFARLA 165


>gi|88860546|ref|ZP_01135184.1| hypothetical protein PTD2_16017 [Pseudoalteromonas tunicata D2]
 gi|88817744|gb|EAR27561.1| hypothetical protein PTD2_16017 [Pseudoalteromonas tunicata D2]
          Length = 141

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 73/147 (49%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++P +E + F  + + ++   ++  L+++++  +  + + +C ++S+ +S ILDVE+ I
Sbjct: 1   MLEPAVEALGFELLGLEVVQAGRDSTLRLYIDHAN-GINVDNCADVSRQVSAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+ +   F++  G  +     L    ++   G ++        L 
Sbjct: 60  TNEYNLEVSSPGLDRPLFKPEHFIKAQGEEIRLRTKLPQDGRRNFKGDLILLDGDMLTLR 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            + +         + +   ++  A +I
Sbjct: 120 IDNKD--------VMVMLGNVEKANII 138


>gi|238916822|ref|YP_002930339.1| hypothetical protein EUBELI_00890 [Eubacterium eligens ATCC 27750]
 gi|259585771|sp|C4Z5N3|RIMP_EUBE2 RecName: Full=Ribosome maturation factor rimP
 gi|238872182|gb|ACR71892.1| hypothetical protein EUBELI_00890 [Eubacterium eligens ATCC 27750]
          Length = 156

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 71/149 (47%), Gaps = 2/149 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
               + +IQPV+E        +  ++   +  L++++++ +G +T+ DC+ +S+A + IL
Sbjct: 8   EAKTTELIQPVVEANGVELFDVDYVKEGSDWYLRVYIDK-EGGVTIDDCQNVSRAFNEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D EN I+  Y  EVSSPG+ RP+ ++ D+ +  G ++  ++       ++  G +    +
Sbjct: 67  DRENYIDDQYIFEVSSPGLTRPLKKEKDYEKSIGRMIEIKLFSPVDKSKEYSGVLKEYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLS 169
               +  +   +         I +  +  
Sbjct: 127 DTVTISIDDVTKTFDRSNLAMIRWAFVDE 155


>gi|29375839|ref|NP_814993.1| hypothetical protein EF1270 [Enterococcus faecalis V583]
 gi|255973019|ref|ZP_05423605.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255976058|ref|ZP_05426644.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256618849|ref|ZP_05475695.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256762267|ref|ZP_05502847.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256852912|ref|ZP_05558282.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256958758|ref|ZP_05562929.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256962136|ref|ZP_05566307.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256965335|ref|ZP_05569506.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|257078787|ref|ZP_05573148.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|257082769|ref|ZP_05577130.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|257085470|ref|ZP_05579831.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|257086617|ref|ZP_05580978.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|257089674|ref|ZP_05584035.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257415888|ref|ZP_05592882.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
 gi|257419090|ref|ZP_05596084.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257422842|ref|ZP_05599832.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|294780120|ref|ZP_06745493.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
 gi|300859867|ref|ZP_07105955.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|34222820|sp|Q835V2|RIMP_ENTFA RecName: Full=Ribosome maturation factor rimP
 gi|29343301|gb|AAO81063.1| conserved hypothetical protein [Enterococcus faecalis V583]
 gi|255964037|gb|EET96513.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255968930|gb|EET99552.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256598376|gb|EEU17552.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256683518|gb|EEU23213.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256711371|gb|EEU26409.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256949254|gb|EEU65886.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256952632|gb|EEU69264.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256955831|gb|EEU72463.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|256986817|gb|EEU74119.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|256990799|gb|EEU78101.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256993500|gb|EEU80802.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|256994647|gb|EEU81949.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|256998486|gb|EEU85006.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257157716|gb|EEU87676.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
 gi|257160918|gb|EEU90878.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257164666|gb|EEU94626.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|294452795|gb|EFG21224.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
 gi|300850685|gb|EFK78434.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|323480501|gb|ADX79940.1| conserved hypothetical protein [Enterococcus faecalis 62]
          Length = 157

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 77/154 (50%), Gaps = 8/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL- 80
             ++ ++ P++EE +F  V++  ++  KN  L++F+++ +G + + +C  +S+ +S  L 
Sbjct: 6   ETVTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDK-EGGIDIEECAFVSEKLSEKLD 64

Query: 81  -DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
               + I   Y LEVSSPG +RP+ ++SD+ +  G  +   +  +   ++++ G ++   
Sbjct: 65  AMDPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQIEGTLVHLD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                L      +      ++     ++  ARL 
Sbjct: 125 SEQLTLSV----KIKTRVKEMTFERKNIAKARLA 154


>gi|323705404|ref|ZP_08116979.1| protein of unknown function DUF150 [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535306|gb|EGB25082.1| protein of unknown function DUF150 [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 151

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 2/136 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +      ++ P IE+  F  V +   +   N  L++++++ DG ++L DC+ +S+ +S
Sbjct: 2   SKIEELTRQLVTPAIEKNKFELVDVEYKKEGNNWYLRVYIDK-DGGVSLDDCQIISEYLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + I+  Y LEVSSPGIDRP+  K DF ++ G +V   +      K+K  G+++G
Sbjct: 61  EKLDEVDPIDNSYILEVSSPGIDRPLKTKRDFEKFKGSLVEVSLYQPIDKKKKYEGELLG 120

Query: 138 TSETGFFLEKEKRGEK 153
             +    +  +    +
Sbjct: 121 LEDDKVIIVDDGGKRE 136


>gi|253580824|ref|ZP_04858087.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847894|gb|EES75861.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 154

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 2/145 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++E   F  V +  ++E  N  L+ ++++  G +T+ DCE +S+A S  L
Sbjct: 8   EKRAEELLAPIVELNGFELVDVEYVKEAGNWYLRGYIDKP-GGITVNDCETVSRAFSDKL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  + IE  Y +E+SSPG+DRP+ +  DF R  G +V          +++  G +     
Sbjct: 67  DENDFIEDSYIMEISSPGLDRPLKKDKDFERNMGKLVEIRTYRPIEKQKEFCGILTAYDS 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFD 165
               ++++        +    I   
Sbjct: 127 NSVTIDEDGTERVFDKKDTALIRLA 151


>gi|172057850|ref|YP_001814310.1| hypothetical protein Exig_1841 [Exiguobacterium sibiricum 255-15]
 gi|226696098|sp|B1YI66|RIMP_EXIS2 RecName: Full=Ribosome maturation factor rimP
 gi|171990371|gb|ACB61293.1| protein of unknown function DUF150 [Exiguobacterium sibiricum
           255-15]
          Length = 155

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  + +P++E      V +  ++   +  L++ +++ DG + L DC  +++ +S
Sbjct: 2   TNVTEKVEQLAKPIVEREGMELVDVEFVKEGADWFLRVSIDK-DGGVDLEDCVNINEKLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ ++ I+  Y L+V+SPG +RP+ +  DF +  G  V  +      D  +  G ++ 
Sbjct: 61  EALNQDDPIDEPYYLDVASPGAERPLKKTEDFEKAIGKHVYIKTHDPVKDATEFEGTLLT 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            SE    LE          +L+I I  + +  ARL V
Sbjct: 121 YSEEMLELEV----RVKTRKLKIEIPVNKIAMARLAV 153


>gi|319896983|ref|YP_004135178.1| hypothetical protein HIBPF06790 [Haemophilus influenzae F3031]
 gi|317432487|emb|CBY80844.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 141

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S ILDVE+ I
Sbjct: 1   MLQDAVEDLGCELWGIECQRMGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    +    L 
Sbjct: 60  ADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIEKDMITLI 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            + + +  +        F ++  A ++
Sbjct: 120 VDDQEQILV--------FGNIQKANVV 138


>gi|169342738|ref|ZP_02863778.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
 gi|169299244|gb|EDS81314.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
          Length = 170

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 9/156 (5%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
              L  D+ ++  P+++E  +    I  ++E N   L++++E+ +  ++LRDCE +S+A+
Sbjct: 19  KEQLVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSRAL 78

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S +LD+E+ I+  Y LEVSSPG++R +     F R+ G  V      S   ++ + G + 
Sbjct: 79  SDMLDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEVFVGFKSSLSGRKNVKGILK 138

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              E    +E E          +I +  D + +A L
Sbjct: 139 DVQENEIIVECEG--------NEIKVPKDKIKTANL 166


>gi|319776226|ref|YP_004138714.1| hypothetical protein HICON_18130 [Haemophilus influenzae F3047]
 gi|1574740|gb|AAC22931.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|317450817|emb|CBY87039.1| conserved hypothetical protein [Haemophilus influenzae F3047]
          Length = 141

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++Q  +E++      I        + +++F+++ DG +T+ DC ++S+ +S ILDVE+ I
Sbjct: 1   MLQDAVEDLGCELWGIECQRVGRFMTVRLFIDK-DGGVTVDDCADVSRQVSAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DRP+     F R+ G  +A  + +   +++K  GK+    +    L 
Sbjct: 60  ADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIEKDMITLI 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            + + +  +        F ++  A ++
Sbjct: 120 VDDQEQILV--------FGNIQKANVV 138


>gi|28378677|ref|NP_785569.1| hypothetical protein lp_2044 [Lactobacillus plantarum WCFS1]
 gi|254556875|ref|YP_003063292.1| hypothetical protein JDM1_1708 [Lactobacillus plantarum JDM1]
 gi|300768188|ref|ZP_07078093.1| protein of hypothetical function DUF150 [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308180816|ref|YP_003924944.1| hypothetical protein LPST_C1634 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|34223110|sp|Q88VK3|RIMP_LACPL RecName: Full=Ribosome maturation factor rimP
 gi|28271513|emb|CAD64418.1| unknown [Lactobacillus plantarum WCFS1]
 gi|254045802|gb|ACT62595.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
 gi|300494252|gb|EFK29415.1| protein of hypothetical function DUF150 [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308046307|gb|ADN98850.1| hypothetical protein LPST_C1634 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 158

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 8/161 (4%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +   I  V   ++    F  V +  + E  +  L++++++  G + + +C  +S  
Sbjct: 1   MSSNVVETIQPVAAAIVSAHQFELVDLEFVREGQSWYLRLYIDKP-GGINIEECAMVSDE 59

Query: 76  ISPIL--DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +S  L     + I   Y LEVSSPG +RP+ +++DF    G  V   +      K+   G
Sbjct: 60  LSEKLDAMEPDPIPQAYFLEVSSPGAERPLKKEADFQNAIGKYVHVGLYQKLDGKKIFEG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +   + T   ++   +         + I+ + +  ARL V
Sbjct: 120 DLTAVTPTTLTIDYLDK----TRHKTVTINREQISQARLAV 156


>gi|314937504|ref|ZP_07844837.1| UPF0090 family protein [Enterococcus faecium TX0133a04]
 gi|314942163|ref|ZP_07849017.1| UPF0090 family protein [Enterococcus faecium TX0133C]
 gi|314947497|ref|ZP_07850912.1| UPF0090 family protein [Enterococcus faecium TX0082]
 gi|314951484|ref|ZP_07854533.1| UPF0090 family protein [Enterococcus faecium TX0133A]
 gi|314992574|ref|ZP_07857992.1| UPF0090 family protein [Enterococcus faecium TX0133B]
 gi|314995491|ref|ZP_07860591.1| UPF0090 family protein [Enterococcus faecium TX0133a01]
 gi|313590325|gb|EFR69170.1| UPF0090 family protein [Enterococcus faecium TX0133a01]
 gi|313592866|gb|EFR71711.1| UPF0090 family protein [Enterococcus faecium TX0133B]
 gi|313596324|gb|EFR75169.1| UPF0090 family protein [Enterococcus faecium TX0133A]
 gi|313599086|gb|EFR77931.1| UPF0090 family protein [Enterococcus faecium TX0133C]
 gi|313643145|gb|EFS07725.1| UPF0090 family protein [Enterococcus faecium TX0133a04]
 gi|313646047|gb|EFS10627.1| UPF0090 family protein [Enterococcus faecium TX0082]
          Length = 147

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 74/149 (49%), Gaps = 8/149 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VEN 84
           ++ P+++E +F  V++  ++  K+  L++F+++ +G + + +C  +S+ +S  LD    +
Sbjct: 1   MVTPILDEQNFELVEVEFVKEGKSWFLRVFIDK-EGGIDIEECAFVSEKLSEKLDAADPD 59

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I   Y LEVSSPG +RP+ ++SD+ +  G  V   +      +++  G +         
Sbjct: 60  PIPQAYFLEVSSPGAERPLKKESDYEKALGDYVHVSLYQPVDGEKQYEGFLQSFDAEQLT 119

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLI 173
           L+          E ++     ++  ARL 
Sbjct: 120 LKI----RIKTREKELTFDRKNIAKARLA 144


>gi|226323232|ref|ZP_03798750.1| hypothetical protein COPCOM_01004 [Coprococcus comes ATCC 27758]
 gi|225208422|gb|EEG90776.1| hypothetical protein COPCOM_01004 [Coprococcus comes ATCC 27758]
          Length = 155

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++E+  F    +  ++   N  L+ ++++  G + + DCE +S+ +S IL
Sbjct: 8   EQKTEEILNPIVEKHGFDLWDVEYVKEGGNWYLRAYIDKP-GGIMVDDCEVVSRELSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I+  Y LEVSSPG+ RP+ ++ DF R  G  V      +   +++ IG +    +
Sbjct: 67  DEKDFIDEAYILEVSSPGLGRPLKKEKDFARSLGEEVEVRTYRAIDRQKEFIGILKDYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               +E E           +      +   RL   
Sbjct: 127 DTVTIEYED-------GETMTFDKADIALIRLAFD 154


>gi|312134895|ref|YP_004002233.1| hypothetical protein Calow_0865 [Caldicellulosiruptor owensensis
           OL]
 gi|311774946|gb|ADQ04433.1| protein of unknown function DUF150 [Caldicellulosiruptor owensensis
           OL]
          Length = 151

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  +++P++E   F  V I   +  K+  L++++++  G +T+ DC+ +S+ +S
Sbjct: 2   SKITKKVEELVKPILERYGFDLVDIEFKKEGKSHFLRVYIDKP-GGITIDDCQLVSEELS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD+ + I   Y LEVSSPG+DRP+V   DF+R  G +V   +     ++ K  G+++ 
Sbjct: 61  ERLDIVDPIPFSYYLEVSSPGVDRPLVTDRDFIRNKGRLVEVFLSQPFLNRTKFTGELVE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            ++    L  +K          I I  + +   ++ 
Sbjct: 121 KNDKFLVLIMDKEK--------IDIPIEKVKKVKIA 148


>gi|239636257|ref|ZP_04677259.1| conserved hypothetical protein [Staphylococcus warneri L37603]
 gi|239597612|gb|EEQ80107.1| conserved hypothetical protein [Staphylococcus warneri L37603]
          Length = 155

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +A  +  +IQPV+++++F  V+I  ++  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKIAEQVEPIIQPVLDDLNFELVEIEYVKEGKDHFLRISIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I   Y L+V+SPG +RP+  +        H +   + +   ++++ +G +  
Sbjct: 61  EAMDENDPIPEMYYLDVASPGAERPIKNEKALKDAISHPIFISLYIPIENEKEWLGILKE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             E    +E +++ +       I I  + +  AR
Sbjct: 121 VKEDIILIEVKEKSKTK----TIEIPRNKIAKAR 150


>gi|330685687|gb|EGG97328.1| hypothetical protein SEVCU121_1926 [Staphylococcus epidermidis
           VCU121]
          Length = 155

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +A  +  +IQPV++E+SF  V+I  ++  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKIAEQVEPIIQPVLDELSFELVEIEYVKEGKDHFLRISIDK-EGGVDLNDCTLASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D  + I   Y L+V+SPG +RP+  +        H +   + +   ++++ +G +  
Sbjct: 61  EAMDANDPIPEMYYLDVASPGAERPIKNEKALKNAVSHPIFISLYVPIENEKEWLGILKE 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             E    +E +++ +       I I  + +  AR
Sbjct: 121 VKEDIILIEVKEKSKTK----TIEIPRNKIAKAR 150


>gi|197117687|ref|YP_002138114.1| hypothetical protein Gbem_1299 [Geobacter bemidjiensis Bem]
 gi|226695910|sp|B5EI54|RIMP_GEOBB RecName: Full=Ribosome maturation factor rimP
 gi|197087047|gb|ACH38318.1| protein of unknown function DUF150 [Geobacter bemidjiensis Bem]
          Length = 160

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 13/165 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ +I  V   +    V +    E   +++++F+E+ +G + L DC ++S+
Sbjct: 1   MAKVDVVERVTEIIAEVGAPLGIELVDLEYKREGRDMVVRVFLEKREGGINLDDCADVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-----GDKQ 129
            +S ILDVE+ +   Y LEVSSPGI RP+ + +D+ R+ GH++  +            ++
Sbjct: 61  QLSDILDVEDFMPERYTLEVSSPGICRPLKKVADYERFLGHLIKVKTFEMLADEAGNKRK 120

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              GK+ G ++    ++            +  +  D +  A L  
Sbjct: 121 TFTGKLTGIADGVIGIDL-------TEGQKARVPLDKVAKANLEF 158


>gi|74316717|ref|YP_314457.1| hypothetical protein Tbd_0699 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056212|gb|AAZ96652.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 161

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 80/144 (55%), Gaps = 13/144 (9%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++PV+  + +  V +        LL+IF+++  G +T+ DC  +S  ++ +  VENI   
Sbjct: 27  LEPVLAGLGYELVMLE--RAGRGLLRIFIDKP-GGVTIDDCVAVSNHLTHLFTVENI--D 81

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
           + RLEVSSPG+DRP+V+  D+ R+ G  V  ++ +   ++++L G+++G       L  +
Sbjct: 82  YDRLEVSSPGLDRPLVKPQDYARFAGEQVTLKLRVPMDNRRRLSGQLLGLESDAVKLVVD 141

Query: 149 KRGEKDMNELQIAISFDSLLSARL 172
            R        ++++   ++ +ARL
Sbjct: 142 GR--------EMSVDLRNVDAARL 157


>gi|197303043|ref|ZP_03168091.1| hypothetical protein RUMLAC_01770 [Ruminococcus lactaris ATCC
           29176]
 gi|197297898|gb|EDY32450.1| hypothetical protein RUMLAC_01770 [Ruminococcus lactaris ATCC
           29176]
          Length = 155

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                ++++P++ E+ F  V +  ++E     L+ ++++  G + + DCE +S+  S IL
Sbjct: 8   EQQTETLLEPIVTELGFELVDVEYVKEGGTWYLRAYIDKP-GGIAVDDCEAVSRRFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I   Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++ +G +    +
Sbjct: 67  DEKDYIADSYVFEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRAIDRQKEFVGLLKAYDD 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +   +  E        + +       +   RL + 
Sbjct: 127 STVTITYED-------DTEQTFDRGDIALIRLALD 154


>gi|257468348|ref|ZP_05632442.1| putative cytoplasmic protein [Fusobacterium ulcerans ATCC 49185]
 gi|317062621|ref|ZP_07927106.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
 gi|313688297|gb|EFS25132.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
          Length = 159

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 10/163 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
              +   I +++ PV+ EM    V I  L++     ++I+VE  +G++TL DC  +S  I
Sbjct: 6   KENILKKIETIVTPVVNEMELSLVDIEYLQDGGYWYVRIYVENPEGDITLEDCAAISNKI 65

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              +  + +IE  + LEVSSPGI+RP+ +  D++R+ G      +     D +   G I 
Sbjct: 66  DEDI--DKLIEQRFFLEVSSPGIERPLKKIEDYIRFKGEKAKLSLKHKVDDNKNFEGIIT 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
              ++  +LE E        E  + I F  +  A L+   E  
Sbjct: 124 DCKDSIIYLELED-------EKVMEIPFSEVRKANLVYEFEEF 159


>gi|229824125|ref|ZP_04450194.1| hypothetical protein GCWU000282_01429 [Catonella morbi ATCC 51271]
 gi|229786479|gb|EEP22593.1| hypothetical protein GCWU000282_01429 [Catonella morbi ATCC 51271]
          Length = 157

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++  I  ++E      V +  ++  K+  L+I+ ++    + + DC  +S+ IS
Sbjct: 2   SAILDKVTPAITEIVEANGCYLVDMEYVKEGKSWFLRIYADKPGR-IDIDDCAAISEQIS 60

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LEVSSPG +RP+          G  V  +        +   G +
Sbjct: 61  EHLDSIKPDPFPEAYFLEVSSPGAERPLKTDQALREAIGEYVHLDYYAPQHGAKSHEGTL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              ++    L  + +  K     Q+ I   ++  ARL 
Sbjct: 121 EAVTDDKVALTVQIKTVKK----QLEIERQAIAKARLA 154


>gi|167465393|ref|ZP_02330482.1| hypothetical protein Plarl_23005 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 140

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 9/142 (6%)

Query: 33  IEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           + E  F  V I  ++   N  L+++V++ +G + + DC  +S+ +S  LD ++ I   Y 
Sbjct: 4   LTENGFELVDIEYVKEGSNWFLRVYVDKLEGGIDIEDCGRISEYLSAKLDEKDPIPTAYF 63

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           LEVSSPG +RP+ +  D  +  G  V         + ++  G+++        ++  K+ 
Sbjct: 64  LEVSSPGAERPLKKPQDIAKSVGKHVFITTYEPVDNAKEFEGELLSFDGETLVVKTAKKK 123

Query: 152 EKDMNELQIAISFDSLLSARLI 173
                    +I ++ + SARL 
Sbjct: 124 S--------SIPYEKVASARLA 137


>gi|296185353|ref|ZP_06853763.1| hypothetical protein CLCAR_0776 [Clostridium carboxidivorans P7]
 gi|296050187|gb|EFG89611.1| hypothetical protein CLCAR_0776 [Clostridium carboxidivorans P7]
          Length = 155

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 89/159 (55%), Gaps = 9/159 (5%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +     L  +++++++P++ E+++    + L+   K+  L+I++++++  ++L+DCE++S
Sbjct: 1   MMNKKILIDELTNLVKPIVTELNYDLYYLELVREGKDNYLRIYIDKENEGISLQDCEKVS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+S +LDV++ I+  Y LEVSSPGI+R +       ++ G+ V   I      K+K  G
Sbjct: 61  RAVSEMLDVKDPIKEGYYLEVSSPGIERILHTDEHLQKYTGNDVVVNISGLLNGKKKYEG 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +++  +     ++ E          +I+I  + + +  L
Sbjct: 121 QLVNFNNEELNIKVEDE--------EISIPREKISTVNL 151


>gi|237757009|ref|ZP_04585464.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237690827|gb|EEP59980.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 147

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M +   +  ++ P++EE  F+ V I  +  K  +L+I++   +   ++ DCE +S+ I  
Sbjct: 1   MKVEEKVKELLLPILEERDFKLVDIEFIPSKRPILRIYIYNPE-GTSIDDCEWVSKRIGA 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE++I+  Y LEVSSPG+DR      ++  + G  V  +      +K+   G ++G 
Sbjct: 60  LLDVEDLIDKAYILEVSSPGLDRKFKNIEEYDIFKGRDVVIKTKEPINEKKVFKGTLLGL 119

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +    +          NE  + I  +++   +L  
Sbjct: 120 EDEKVKI--------KENEETVEIPLENVSQTKLDF 147


>gi|167758064|ref|ZP_02430191.1| hypothetical protein CLOSCI_00402 [Clostridium scindens ATCC 35704]
 gi|167663961|gb|EDS08091.1| hypothetical protein CLOSCI_00402 [Clostridium scindens ATCC 35704]
          Length = 155

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +++ P++EE  F  V +  ++E     L+ ++++  G + + DCE +S+ +S IL
Sbjct: 8   EQKTEAILMPIVEEHGFELVDVEYVKEGGTWYLRAYIDKP-GGINVDDCEVVSRRLSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y LEVSSPG+ RP+ ++ DF R  G  V          +++  G +    +
Sbjct: 67  DEKDYIEEAYILEVSSPGLGRPLKKEKDFKRSLGEEVDVRTYRMIEKQKEFTGLLKDYDD 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E E    K   +  IA+
Sbjct: 127 ATVTIEMEDGTLKTFEKSDIAL 148


>gi|296113982|ref|YP_003627920.1| hypothetical protein MCR_1770 [Moraxella catarrhalis RH4]
 gi|295921676|gb|ADG62027.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
 gi|326559306|gb|EGE09733.1| hypothetical protein E9G_09360 [Moraxella catarrhalis 7169]
 gi|326564318|gb|EGE14548.1| hypothetical protein E9K_04722 [Moraxella catarrhalis 103P14B1]
 gi|326568243|gb|EGE18325.1| hypothetical protein E9U_09405 [Moraxella catarrhalis BC8]
 gi|326569944|gb|EGE19991.1| hypothetical protein E9Q_01306 [Moraxella catarrhalis BC1]
 gi|326570022|gb|EGE20068.1| hypothetical protein E9S_06263 [Moraxella catarrhalis BC7]
 gi|326573672|gb|EGE23630.1| hypothetical protein EA1_08342 [Moraxella catarrhalis O35E]
 gi|326574705|gb|EGE24641.1| hypothetical protein E9Y_05110 [Moraxella catarrhalis 101P30B1]
          Length = 165

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 18/172 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGN------MTLRD 68
                   +++ +I P +         I  + +    LL+I++E    N      +T+ D
Sbjct: 1   MKPSSKIAELTELIAPAVAACGVDLWGIEFMPQGRKSLLRIYIESLPENRAAGEHVTIED 60

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-- 126
           C  ++  +S +LDV + I G Y LEVSSPG DRP+  +     + G  +   ++ + G  
Sbjct: 61  CSAVNHQVSGVLDVHDPIAGEYVLEVSSPGFDRPLFTREQVAAYVGETINLRLIHAIGSG 120

Query: 127 --DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
              ++K++G++    E    +  E +        +  I+FDS+  A L+  D
Sbjct: 121 DTKRRKVVGRLTCVGEDSMTVITEDKL-------EFNIAFDSVDKAHLVYED 165


>gi|326572880|gb|EGE22865.1| hypothetical protein E9W_08250 [Moraxella catarrhalis CO72]
          Length = 165

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 18/172 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGN------MTLRD 68
                   +++ +I P +         I  + +    LL+I++E    N      +T+ D
Sbjct: 1   MKPSSKIAELTELITPAVAACGVDLWGIEFMPQGRKSLLRIYIESLPENRAAGEHVTIED 60

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-- 126
           C  ++  +S +LDV + I G Y LEVSSPG DRP+  +     + G  +   ++ + G  
Sbjct: 61  CSAVNHQVSGVLDVHDPIAGEYVLEVSSPGFDRPLFTREQVAAYVGETINLRLIHAIGSG 120

Query: 127 --DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
              ++K++G++    E    +  E +        +  I+FDS+  A L+  D
Sbjct: 121 DTKRRKVVGRLTCVGEDSMTVITEDKL-------EFNIAFDSVDKAHLVYED 165


>gi|110801637|ref|YP_698977.1| hypothetical protein CPR_1662 [Clostridium perfringens SM101]
 gi|123341718|sp|Q0SSD0|RIMP_CLOPS RecName: Full=Ribosome maturation factor rimP
 gi|110682138|gb|ABG85508.1| conserved hypothetical protein [Clostridium perfringens SM101]
          Length = 154

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                L  D+ ++  P+++E  +    I  ++E N   L++++E+ +  ++LRDCE +S+
Sbjct: 1   MKKEQLVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD+E+ I+  Y LEVSSPG++R +     F R+ G  +      S   ++ + G 
Sbjct: 61  ALSDMLDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEIFVGFKSSLSGRKNVKGI 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    E    +E E          +I +  D + +A L
Sbjct: 121 LKDVQENEIIVECEG--------NEIKVPKDKIKTANL 150


>gi|37523057|ref|NP_926434.1| hypothetical protein glr3488 [Gloeobacter violaceus PCC 7421]
 gi|35214060|dbj|BAC91429.1| glr3488 [Gloeobacter violaceus PCC 7421]
          Length = 182

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 15/169 (8%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMT 65
                 PR      +   ++++ +PV E++  + V ++     K   L++ +        
Sbjct: 23  FFDGMNPR-----DIVEQVTALAEPVAEQLGLQLVAVAYQTHTKPATLRVDIRHPTEGTG 77

Query: 66  LRDCEELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           L DCE++S+A+  +LD  +++I G Y LEVSSPG++R +    +F+ + G  V  +    
Sbjct: 78  LDDCEKMSRALEALLDTRDDLIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFGP 137

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              K++  G+++       +L    R        ++A+    +   +L+
Sbjct: 138 VDGKKQWEGRLLERDGENVYLTIAGR--------RVALPRPQVARVQLV 178


>gi|154506275|ref|ZP_02043013.1| hypothetical protein RUMGNA_03817 [Ruminococcus gnavus ATCC 29149]
 gi|153793414|gb|EDN75834.1| hypothetical protein RUMGNA_03817 [Ruminococcus gnavus ATCC 29149]
          Length = 155

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +++P++ E  F  V +  ++E  N  L+ ++++  G +T+ DCE +S+  S IL
Sbjct: 8   EKQTEELLEPIVAEQGFELVDVEYVKEAGNWYLRAYIDKP-GGITVDDCEVVSRRFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y  EVSSPG+ RP+ ++ DF+R  G  V      +   +++ +G +    +
Sbjct: 67  DEKDYIEDSYIFEVSSPGLGRPLKKEKDFIRSVGQEVEIRTYRAINRQKEFVGILKEFDQ 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E    +   + +IA+
Sbjct: 127 NTVTISYEDDSTQTFEKSEIAL 148


>gi|270290315|ref|ZP_06196540.1| hypothetical protein HMPREF9024_00500 [Pediococcus acidilactici
           7_4]
 gi|270281096|gb|EFA26929.1| hypothetical protein HMPREF9024_00500 [Pediococcus acidilactici
           7_4]
          Length = 158

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 73/160 (45%), Gaps = 8/160 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +   I+ + +PVIE   F+ V++  ++E     L+ ++++  G + + +C  +S  
Sbjct: 1   MSSNVVEKITELARPVIESHDFQLVEVEFVKEGQGWFLRFYIDKV-GGINIEECAMVSDE 59

Query: 76  ISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +S +LD +  + I   Y LEVSSPG +RP+  K D     G  +   +  S   ++   G
Sbjct: 60  LSELLDQQDPDPIPQAYFLEVSSPGAERPLKTKEDLAAAVGEYIHISLYASINKQKVFEG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +         L+   +        ++ ++++ +  ARL 
Sbjct: 120 YLKSFENDELVLDYLDK----TRHKELKVAYNQVAFARLA 155


>gi|225027046|ref|ZP_03716238.1| hypothetical protein EUBHAL_01302 [Eubacterium hallii DSM 3353]
 gi|224955510|gb|EEG36719.1| hypothetical protein EUBHAL_01302 [Eubacterium hallii DSM 3353]
          Length = 162

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 11/169 (6%)

Query: 9   SKYEPRIFGD-MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTL 66
           S  E RI      +      ++ P+IEE  F  V +  +    N  L+++ ++ +G + +
Sbjct: 2   SGKEVRINMKRTEIVAKTEELVTPIIEENHFELVDVEYVREGANWYLRVYADK-EGGINI 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DC  +S+A+   LD E+ I   Y LEVSSPG+ RP+ ++ DF R  G  V C++  +  
Sbjct: 61  DDCVLISRALEEKLDAEDFISDAYILEVSSPGLGRPLKKEKDFKRSLGKSVECKLYKAIN 120

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            +++  G +   +E    +E E          ++ +    +   RL + 
Sbjct: 121 KQKEFEGILKDFTEDTVTIETEG--------NELVLDRKDIAMIRLAID 161


>gi|71276364|ref|ZP_00652641.1| Protein of unknown function DUF150 [Xylella fastidiosa Dixon]
 gi|71898653|ref|ZP_00680823.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
 gi|170729431|ref|YP_001774864.1| hypothetical protein Xfasm12_0201 [Xylella fastidiosa M12]
 gi|71162826|gb|EAO12551.1| Protein of unknown function DUF150 [Xylella fastidiosa Dixon]
 gi|71731600|gb|EAO33661.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
 gi|167964224|gb|ACA11234.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 215

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 84/166 (50%), Gaps = 14/166 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDC 69
             D G+   I +++ P +E + F  +    +      +L+++++     + +  +++ DC
Sbjct: 17  VSDKGIE--IVNLLAPKVEMLGFDLLGAEYVLVPSGAILRLYIDIPFAMQPECMVSIDDC 74

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E +S+ +S  LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     +
Sbjct: 75  ERVSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSR 134

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +L GKI+         +        +N +++A+ F+++  AR++  
Sbjct: 135 RLQGKIVRVE------QVGGFVVLLVNGVELAVDFNNIDKARIVPD 174


>gi|331090929|ref|ZP_08339771.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405151|gb|EGG84687.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 155

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++EE  F  V +  ++E     L+ ++++  G + + DCE +S+A S IL
Sbjct: 8   EQKTEELLLPIVEEHGFELVDVEYVKEGGTWYLRAYIDKP-GGIAVDDCEVVSRAFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y  EVSSPG+ RP+ ++ DF R  G  V      +   +++ +G + G  +
Sbjct: 67  DEKDYIEDTYIFEVSSPGLGRPLKKEKDFARSMGEEVEVRTYRAIDRQKEFVGILKGYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               +E E   E+           + +   RL   
Sbjct: 127 NTVTIEMEDGSERI-------FERNDIALIRLAFD 154


>gi|289578390|ref|YP_003477017.1| hypothetical protein Thit_1191 [Thermoanaerobacter italicus Ab9]
 gi|297544666|ref|YP_003676968.1| hypothetical protein Tmath_1242 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528103|gb|ADD02455.1| protein of unknown function DUF150 [Thermoanaerobacter italicus
           Ab9]
 gi|296842441|gb|ADH60957.1| protein of unknown function DUF150 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 151

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 2/136 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +      ++ P++E+ +F  V +   +   N  L++++++ +G +TL DC+ +S+ +S
Sbjct: 2   SKIEQIAKDLVTPILEKNNFELVDVEYKKEGNNWYLRVYIDK-EGGITLDDCQLVSEYLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++ 
Sbjct: 61  DRLDEVDPIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYSPIDKRKKFEGELIE 120

Query: 138 TSETGFFLEKEKRGEK 153
            +     +      ++
Sbjct: 121 FTGDKIIILYNGERKE 136


>gi|62263138|gb|AAX78134.1| unknown protein [synthetic construct]
          Length = 187

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 8/164 (4%)

Query: 9   SKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRD 68
              +  +     L  D+  +++P+  ++ +    I ++    L ++IF++  +  +++ D
Sbjct: 18  DDDDKHMLEVKMLLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDH-ENGVSVDD 76

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           C+ +S+ IS + DVE+ + G Y LEVSSPG++R +          G  V    +   G +
Sbjct: 77  CQIVSKEISAVFDVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQ 136

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            K  G +         L  E          +I+  FD L   R+
Sbjct: 137 TKFKGVLERVEGNNVILNLED-------GKEISFDFDELKKLRV 173


>gi|85860523|ref|YP_462725.1| hypothetical protein SYN_01790 [Syntrophus aciditrophicus SB]
 gi|123517502|sp|Q2LWU4|RIMP_SYNAS RecName: Full=Ribosome maturation factor rimP
 gi|85723614|gb|ABC78557.1| hypothetical protein SYN_01790 [Syntrophus aciditrophicus SB]
          Length = 160

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L  DI  + +PVI       V++  L  K   L++I+++R +G +TL DC E+S  + 
Sbjct: 7   KKLREDIWQLAEPVIASEGLELVEVECLRMKTRWLVRIYMDR-EGGVTLDDCSEISNQLG 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDV ++    Y LEVSSPG+DRP+VR  DF+R+ G  V+  +       +   G+++ 
Sbjct: 66  DVLDVHDLPPDPYTLEVSSPGLDRPLVRDKDFVRYQGCEVSIRLEQKVDGIRNFRGRLLE 125

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             E        K    +M      I  D ++ A L+
Sbjct: 126 YVEEDGR----KILVIEMASKLYRIPRDLIVKANLV 157


>gi|91774421|ref|YP_544177.1| hypothetical protein Mfla_0065 [Methylobacillus flagellatus KT]
 gi|122399243|sp|Q1GXD8|RIMP_METFK RecName: Full=Ribosome maturation factor rimP
 gi|91708408|gb|ABE48336.1| protein of unknown function DUF150 [Methylobacillus flagellatus KT]
          Length = 144

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 81/150 (54%), Gaps = 11/150 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D++++++  + ++ +  V + L   +  L+++F+++ +  + + DC  +S  +S +L V
Sbjct: 2   QDLNALLERSLGQLGYELVDMELAN-RGKLIRLFIDKPE-GINIDDCVLVSNHLSNLLAV 59

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I  + RLE+SSPG+DR + + SDF+R+ G     ++ +    ++  +G + G  +  
Sbjct: 60  EHDI-DYDRLEISSPGLDRVLKKTSDFVRFAGERAQVKLRMPIEGRKNFLGILRGVDQEY 118

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             LE +         ++  + F ++  ARL
Sbjct: 119 LVLECDG--------VEQRVPFSNIDKARL 140


>gi|71901434|ref|ZP_00683524.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
 gi|71728805|gb|EAO30946.1| Protein of unknown function DUF150 [Xylella fastidiosa Ann-1]
          Length = 216

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 14/166 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDC 69
             D G+   I +++ P +E + F  +    L      +L+++++     + +  +++ DC
Sbjct: 18  VSDKGIE--IVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDC 75

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E +S+ +S  LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     +
Sbjct: 76  ERVSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSR 135

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +L GKI+         +        +N +++A+ F+++  AR++  
Sbjct: 136 RLQGKIVRVE------QVGGFVVLLVNGVELAVDFNNIDKARIVPD 175


>gi|255524232|ref|ZP_05391191.1| protein of unknown function DUF150 [Clostridium carboxidivorans P7]
 gi|255512057|gb|EET88338.1| protein of unknown function DUF150 [Clostridium carboxidivorans P7]
          Length = 154

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 88/158 (55%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  +++++++P++ E+++    + L+   K+  L+I++++++  ++L+DCE++S+
Sbjct: 1   MNKKILIDELTNLVKPIVTELNYDLYYLELVREGKDNYLRIYIDKENEGISLQDCEKVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LDV++ I+  Y LEVSSPGI+R +       ++ G+ V   I      K+K  G+
Sbjct: 61  AVSEMLDVKDPIKEGYYLEVSSPGIERILHTDEHLQKYTGNDVVVNISGLLNGKKKYEGQ 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +     ++ E          +I+I  + + +  L
Sbjct: 121 LVNFNNEELNIKVEDE--------EISIPREKISTVNL 150


>gi|28198120|ref|NP_778434.1| hypothetical protein PD0192 [Xylella fastidiosa Temecula1]
 gi|28056180|gb|AAO28083.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
          Length = 216

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 14/166 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDC 69
             D G+   I +++ P +E + F  +    L      +L+++++     + +  +++ DC
Sbjct: 18  VSDKGIE--IVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDC 75

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E +S+ +S  LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     +
Sbjct: 76  ERVSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSR 135

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +L GKI+         +        +N +++A+ F+++  AR++  
Sbjct: 136 RLQGKIVRVE------QVGGFVVLLVNGVELAVDFNNIDKARIVPD 175


>gi|116492652|ref|YP_804387.1| hypothetical protein PEPE_0886 [Pediococcus pentosaceus ATCC 25745]
 gi|122265884|sp|Q03FS7|RIMP_PEDPA RecName: Full=Ribosome maturation factor rimP
 gi|116102802|gb|ABJ67945.1| hypothetical protein PEPE_0886 [Pediococcus pentosaceus ATCC 25745]
          Length = 158

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 75/160 (46%), Gaps = 8/160 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQA 75
               +   ++ ++QP+ +  +F  V++  ++E     L++++++  G + + +C  +S  
Sbjct: 1   MSNNVIEKVTELVQPITDRHNFELVEVEFVKEGQGWFLRVYIDKV-GGINIEECAMVSDE 59

Query: 76  ISPILDVENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +S ILD ++   I   Y LEVSSPG +RP+  K D  R  G  +   +  S   ++   G
Sbjct: 60  LSEILDAQDPDPIPQAYFLEVSSPGAERPLKTKEDLTRSIGEYIHISLYASINKQKVFEG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            +         L+   +        ++ +++D +  ARL 
Sbjct: 120 YLKSFENDEIVLDYLDK----TRHKELKVTYDQVAFARLA 155


>gi|238020477|ref|ZP_04600903.1| hypothetical protein GCWU000324_00359 [Kingella oralis ATCC 51147]
 gi|237867457|gb|EEP68463.1| hypothetical protein GCWU000324_00359 [Kingella oralis ATCC 51147]
          Length = 145

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 11/149 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI S++   +  + +  V   L  +    L++F+++  G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQSILDTTLPGLGYELVDHELTAQG--TLRVFIDKA-GGITVDDCAAVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   +  LE+SSPG+DRP+ + +DF+R+ G  +  +  L    ++  IG++   +++  
Sbjct: 59  NI--DYKNLEISSPGLDRPLKKAADFIRFAGSQIKLKTRLPVDGQKNFIGRLEAFNDSTQ 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L          +     I   ++  ARL
Sbjct: 117 TLTL------SFDGKTAEIELGNIDKARL 139


>gi|308272454|emb|CBX29058.1| Ribosome maturation factor rimP [uncultured Desulfobacterium sp.]
          Length = 194

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
                L   I      + E      V I    E    +++++V++  G +TL+DC  +S 
Sbjct: 37  LTREELIAKIKEFADTICESKGIELVHIEYQRETGGRVIRLYVDK-QGGVTLKDCAWVSH 95

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ILD+    +  Y LEVSSPG +RP+ +  DF R+ G+      ++    ++   G 
Sbjct: 96  QLSDILDINLDTDWPYSLEVSSPGANRPLGKPEDFKRFKGNTATVRTIVPVEGQKNFKGV 155

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++G ++    L+   +         +AIS+  +  ARL
Sbjct: 156 LLGFNDGFVKLKINDKM--------VAISYKEIAKARL 185


>gi|326565083|gb|EGE15276.1| hypothetical protein E9M_00058 [Moraxella catarrhalis 46P47B1]
 gi|326567251|gb|EGE17371.1| hypothetical protein E9O_01044 [Moraxella catarrhalis 12P80B1]
          Length = 165

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 18/172 (10%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGN------MTLRD 68
                   +++ +I P ++        I  + +    LL+I++E    N      +T+ D
Sbjct: 1   MKPSSKIAELTELIAPAVDACGVDLWGIEFMPQGRKSLLRIYIESLPENRAAGEHVTIED 60

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-- 126
           C  ++  +S +LDV + I G Y LEVSSPG DRP+  +     + G  +   ++ + G  
Sbjct: 61  CSAVNHQVSGVLDVHDPIAGEYVLEVSSPGFDRPLFTREQVAAYVGETINLRLIHAIGSG 120

Query: 127 --DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
              ++K++G++    E    +  E +        +  I+FDS+  A L+  D
Sbjct: 121 DTKRRKVVGRLTCVGEDSMTVITEDKL-------EFNIAFDSVDKAHLVYED 165


>gi|222055778|ref|YP_002538140.1| protein of unknown function DUF150 [Geobacter sp. FRC-32]
 gi|254801441|sp|B9M1F7|RIMP_GEOSF RecName: Full=Ribosome maturation factor rimP
 gi|221565067|gb|ACM21039.1| protein of unknown function DUF150 [Geobacter sp. FRC-32]
          Length = 159

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ + + V+  +    V++    E   L+L++F+++ +G +TL DCE +S+
Sbjct: 1   MAKVDVVSRVTELAEQVLSSLGMELVELEYKHEGRELVLRLFIDK-EGGVTLDDCESVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-----GDKQ 129
            +S IL+VE+II GHYR EVSSPG+DRP+ + SD+ ++ G +V      +        ++
Sbjct: 60  DLSQILEVEDIITGHYRFEVSSPGLDRPLKKGSDYEKYAGRLVKIRTFEALADDAGNKRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +G++ G  E    +  +             I  D +  A L  
Sbjct: 120 TFLGELKGLKEGQVHIALK-------EGQSAVIPLDKIAKANLEF 157


>gi|224825863|ref|ZP_03698967.1| protein of unknown function DUF150 [Lutiella nitroferrum 2002]
 gi|224602087|gb|EEG08266.1| protein of unknown function DUF150 [Lutiella nitroferrum 2002]
          Length = 141

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +  + +  V   L        ++F+++  G +T+ DC  +S  ++ +  VE
Sbjct: 2   DVRLLLENTLPGLGYELVDFELTPGGG--FRVFLDKP-GGITVEDCVLVSNHLTRLFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ ++SDF+R++G     +  +    ++K  G++ G  +   
Sbjct: 59  NI--DYERLEVSSPGLDRPLKKESDFVRFSGQRAKIKTRMPIEQQKKFSGRLAGVVDGAV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            LE E R         +AI    +  ARL
Sbjct: 117 QLEFEGR--------TVAIPLAVIDKARL 137


>gi|303229567|ref|ZP_07316355.1| conserved hypothetical protein [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303232094|ref|ZP_07318797.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302513200|gb|EFL55239.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302515692|gb|EFL57646.1| conserved hypothetical protein [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 152

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +SSV++ VI   +   V +  + E++  L++++++  G + L DC+ +S+ 
Sbjct: 1   MKREAVEEFVSSVVEGVIAGTNLELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQMVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD ++ I  +Y LEVSSPG+DR + +  DF+R+NG  V  ++       ++  G +
Sbjct: 60  LSAALDEKDPIAENYLLEVSSPGLDRVLKKDKDFIRYNGRDVDIQLFKPINGSKQYTGVL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G ++T                  +     ++   RL
Sbjct: 120 QGFTDTTIEFSINGES--------VTFERSAIAQIRL 148


>gi|304437179|ref|ZP_07397140.1| protein of hypothetical function DUF150 [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369841|gb|EFM23505.1| protein of hypothetical function DUF150 [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 163

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 15/173 (8%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVER 59
           ME+  F+   YE R      +   +  +++ ++ +  +   V +  ++E++  L++++++
Sbjct: 1   MEAHSFIT--YEKRESMSAKIEERVEEMVRGLLTDSPAIELVDVEYVKERDYYLRVYIDK 58

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
             G + + DC+ LS+ +  ILD E++I   Y LEVSSPG+DR + ++ DF+R +G VV  
Sbjct: 59  A-GGIDIDDCQRLSERLEEILDREDVIPDAYTLEVSSPGLDRVLRKERDFVREHGRVVDV 117

Query: 120 EIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +      K++  G + G       L+             I I    +   RL
Sbjct: 118 TLYAPFEGKKQWTGTLAGYDGETLTLDDG-----------IRIPMQQVSQVRL 159


>gi|229552420|ref|ZP_04441145.1| protein of hypothetical function DUF150 [Lactobacillus rhamnosus
           LMS2-1]
 gi|229314157|gb|EEN80130.1| protein of hypothetical function DUF150 [Lactobacillus rhamnosus
           LMS2-1]
          Length = 167

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 74/158 (46%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++++++P++++  F    +  ++      L++++++  G +TL +C  +S+A+S
Sbjct: 12  QSVVETVTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDKP-GGITLDECVLVSEALS 70

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+ R++D+ +  G  +   +      K+   G +
Sbjct: 71  EQLDAINPDPIPQQYFLEVSSPGAERPLKRETDYEQAIGDYIHVSLFKKLDGKKVFEGTL 130

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    L  + +  K        I    + SARL 
Sbjct: 131 KDLKPDQLTLTVKDKSRKFDQ----VIDRKLIASARLA 164


>gi|225849797|ref|YP_002730031.1| hypothetical protein PERMA_0235 [Persephonella marina EX-H1]
 gi|259586177|sp|C0QTL6|RIMP_PERMH RecName: Full=Ribosome maturation factor rimP
 gi|225645648|gb|ACO03834.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 151

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 9/158 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
               +   +  ++QP++EE   + V I  + E   +L+I++   +   T+ DCE +S+ I
Sbjct: 1   MKQEIIEKVKEMLQPLLEERGLKLVDIEYVTEGKPVLRIYIYNPE-GTTIEDCEWISRRI 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             +LD+E++I   Y LEVSSPG++R +    ++  + G  +   +      K  + G + 
Sbjct: 60  GALLDIEDLIPVSYTLEVSSPGLERKLKNVEEYDIFKGRDIKIVLKEPVDKKNVIKGVLK 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G  +    +        +    ++ I  +++  A L  
Sbjct: 120 GREDNNIIV--------EEEGEEVRIPLENIARANLEF 149


>gi|253701582|ref|YP_003022771.1| hypothetical protein GM21_2984 [Geobacter sp. M21]
 gi|259585778|sp|C6E2Q3|RIMP_GEOSM RecName: Full=Ribosome maturation factor rimP
 gi|251776432|gb|ACT19013.1| protein of unknown function DUF150 [Geobacter sp. M21]
          Length = 160

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 13/165 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ +I  V   +    V +    E   +++++F+E+ +G + L DC E+S+
Sbjct: 1   MAKVDVVERVTEIIAEVGAPLGIELVDLEYKREGRDMVVRVFLEKREGGINLDDCAEVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-----GDKQ 129
            +S ILDVE+ +   Y LEVSSPGI RP+ +  D+ R+ GH++  +            ++
Sbjct: 61  QLSDILDVEDFMPERYTLEVSSPGICRPLKKVVDYERFMGHLIKVKTFEMLPDEAGNKRK 120

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              GK+ G ++    ++               +  D +  A L  
Sbjct: 121 TFTGKLTGIADGVIGIDL-------TEGQHARVPLDKVAKAHLEF 158


>gi|300704338|ref|YP_003745941.1| hypothetical protein RCFBP_20140 [Ralstonia solanacearum CFBP2957]
 gi|299072002|emb|CBJ43332.1| conserved protein of unknown function [Ralstonia solanacearum
           CFBP2957]
          Length = 149

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 4/139 (2%)

Query: 36  MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
           M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVS
Sbjct: 1   MGYELVEVERAPAG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--HYERLEVS 56

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDM 155
           SPG+DRP+   +DF R+ G  V   + L    ++   G +   +            E   
Sbjct: 57  SPGLDRPLRTLTDFTRFAGQEVKVTLRLPVDGQKNFTGIVQAPAGEPGQERIGLEFEGKD 116

Query: 156 NELQIAISFDSLLSARLIV 174
               +  +   L  ARL+ 
Sbjct: 117 GPALLEFTLSELDRARLVP 135


>gi|302878487|ref|YP_003847051.1| hypothetical protein Galf_1259 [Gallionella capsiferriformans ES-2]
 gi|302581276|gb|ADL55287.1| protein of unknown function DUF150 [Gallionella capsiferriformans
           ES-2]
          Length = 141

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 79/152 (51%), Gaps = 13/152 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +I+  +  + +  V +        LL++F+++ D  + + DC+ +S  ++ +  VE
Sbjct: 2   DVVKLIEVTVSGLGYELVDVE--RAGRGLLRVFIDKPD-GIAVEDCQVVSNQLTRLFTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DR + +++DF+R+ G     ++ +    ++  IG I   ++   
Sbjct: 59  NI--DYDRLEVSSPGLDRALKKEADFIRFVGQKAQIKLRMPIAARKNFIGVIGEINDGVL 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            L+ E         + +AI   ++  ARL+ T
Sbjct: 117 QLDVEG--------VPVAIELTNVDKARLVPT 140


>gi|303256974|ref|ZP_07342988.1| DUF150-containing protein [Burkholderiales bacterium 1_1_47]
 gi|330999162|ref|ZP_08322881.1| hypothetical protein HMPREF9439_00503 [Parasutterella
           excrementihominis YIT 11859]
 gi|302860465|gb|EFL83542.1| DUF150-containing protein [Burkholderiales bacterium 1_1_47]
 gi|329575362|gb|EGG56906.1| hypothetical protein HMPREF9439_00503 [Parasutterella
           excrementihominis YIT 11859]
          Length = 186

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 32/184 (17%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M ++  +  +I   +E + +  V +  L     L+++ +++ DG +TL DCE++S  ++ 
Sbjct: 1   MAVSTQLFEMIDATVEGLGYELVDVEKLPRG--LIRVTIDK-DGGITLDDCEKVSNQLNN 57

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-------GDKQKL 131
            + VEN+   + RLEVSSPG+DRP+ R  DF+++ G  V  E+             +++L
Sbjct: 58  AMTVENV--DYDRLEVSSPGVDRPLKRPRDFVKFVGQNVHVELFAPITGEGLPENGRRRL 115

Query: 132 IGKIMGTSETG----FFLEKEK----------------RGEKDMNELQIAISFDSLLSAR 171
            G +             +   +                + + D   + +   F+ +  A 
Sbjct: 116 DGTLDAVEGDENNPSITMTLSENRVARTPAEKQRAAKTKAKSDTPAVTVTFPFNDVERAN 175

Query: 172 LIVT 175
           L+  
Sbjct: 176 LVPD 179


>gi|294101967|ref|YP_003553825.1| protein of unknown function DUF150 [Aminobacterium colombiense DSM
           12261]
 gi|293616947|gb|ADE57101.1| protein of unknown function DUF150 [Aminobacterium colombiense DSM
           12261]
          Length = 159

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +S+ ++ ++E + +  V +   +E KNL ++++++   G +T++DCE +S+++S  L
Sbjct: 8   KEKLSASLRQIVESLGYECVGVVFAQESKNLYVKVYID-VLGGITVKDCETVSRSLSRYL 66

Query: 81  DVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  +  +   Y LEV S G+DRP+    D+ R+ G  V          +++  G I+   
Sbjct: 67  DENDSALPDRYFLEVGSAGLDRPLFSLDDYARFAGKKVKIRCQTLVEGRKRFTGTILSVD 126

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                +  +       ++ ++ I F S+    L+  
Sbjct: 127 NATKTVCVQLEE----SDQKVEIPFASIQKGNLVYD 158


>gi|302039406|ref|YP_003799728.1| hypothetical protein NIDE4135 [Candidatus Nitrospira defluvii]
 gi|300607470|emb|CBK43803.1| conserved protein of unknown function DUF150 [Candidatus Nitrospira
           defluvii]
          Length = 159

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAIS 77
             L   I  +  P+++      V+   + +    + ++F+++  G +TL DCE+  +++S
Sbjct: 5   EALNLRIQEIAAPILQSHGLELVEAVCVGQGPRTVIRVFIDKP-GGITLTDCEQAHRSLS 63

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P LDV +     Y LE+SSPG+DRP+    D+ R  G  V  ++      + +L+G ++ 
Sbjct: 64  PALDVIDPFPHAYTLEISSPGLDRPLRSVQDYRRLIGKPVTLKLREPIQAQWRLVGAVVE 123

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             + G  L  +++   +     I + FD +  AR
Sbjct: 124 VDDRGVTLGIQQKKTTE----TIRVEFDQIALAR 153


>gi|328957407|ref|YP_004374793.1| hypothetical protein CAR_c10840 [Carnobacterium sp. 17-4]
 gi|328673731|gb|AEB29777.1| hypothetical protein CAR_c10840 [Carnobacterium sp. 17-4]
          Length = 154

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 8/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ +++P++E   F    I  ++  KN  L++++++ +  + L DC  +S+ IS  
Sbjct: 1   MVETVTEIVKPIVERNQFELEDIEFIKEGKNWFLRVYIDKPE-GIDLEDCALVSEQISEH 59

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +D    + I   Y LEVSSPG +RP+ ++ D++   G  +   +      ++   G +  
Sbjct: 60  MDKINPDPIPQAYFLEVSSPGAERPLKKEEDYVNAVGEYIHISLYEPVDGEKVYEGTLKE 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            ++    L              I  S  ++  AR
Sbjct: 120 VNDETLTLTI----RVKTRVKDIEFSRKTIAKAR 149


>gi|255319714|ref|ZP_05360922.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
 gi|262380004|ref|ZP_06073159.1| UPF0090 protein [Acinetobacter radioresistens SH164]
 gi|255303243|gb|EET82452.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
 gi|262298198|gb|EEY86112.1| UPF0090 protein [Acinetobacter radioresistens SH164]
          Length = 174

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-------------- 60
                    +  +I P +E        I  L   K  L++IF+++               
Sbjct: 1   MKLSNKTQALHDLIAPAVEACDVELWGIEFLPQGKRSLVRIFIDKPVDENAEPVLNEDGE 60

Query: 61  ---DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + ++DC  ++Q +  ILDV + I G Y LEVSSPG DRP  +      + G  V
Sbjct: 61  LEQGRGIGVQDCVRVTQQVGAILDVHDPISGEYSLEVSSPGWDRPFFQLEQMSAYIGQQV 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E  G K      + I  +++  A LI  D
Sbjct: 121 ALRLISAVDNRRKFQAKLVSVDLEQEQIQVEVEGSK-----VLEIDSNNIDKANLIYQD 174


>gi|315641144|ref|ZP_07896223.1| protein of hypothetical function DUF150 [Enterococcus italicus DSM
           15952]
 gi|315483152|gb|EFU73669.1| protein of hypothetical function DUF150 [Enterococcus italicus DSM
           15952]
          Length = 154

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 71/156 (45%), Gaps = 8/156 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++ P+++   F  V++  ++  K+  L++F+++++  + + +C  +S+ +S  
Sbjct: 1   MVQTVTDLVVPILDSKHFELVEVEFVKEGKSWFLRVFIDKEE-GIDIEECAWVSEMLSEK 59

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    + I   Y LE+SSPG +RP+ ++ D+ +  G  V   +  +   +++  G +  
Sbjct: 60  LDSIDPDPIPQAYFLEISSPGAERPLKKEKDYEKAVGSFVHLSLYQAVDGEKQYEGILDA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  L                    ++  ARL 
Sbjct: 120 VEAETLTLTY----RIKTRTKTQTFERKNIAKARLA 151


>gi|39996685|ref|NP_952636.1| hypothetical protein GSU1585 [Geobacter sulfurreducens PCA]
 gi|81702398|sp|Q74CT6|RIMP_GEOSL RecName: Full=Ribosome maturation factor rimP
 gi|39983566|gb|AAR34959.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298505696|gb|ADI84419.1| protein of unknown function DUF150 [Geobacter sulfurreducens KN400]
          Length = 159

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 14/165 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                +AG I++V + V+       V++    E   ++L++FV++  G ++L DC  +S+
Sbjct: 1   MQKDDVAGRITAVAEQVLTPQGLELVEVEYKREGRQMVLRLFVDKP-GGISLDDCAAVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
            +S ILDVE+ I  +Y LEVSSPG++RP+ +++D+ R+ G +V         D     ++
Sbjct: 60  ELSEILDVEDFIRENYTLEVSSPGLNRPLKKEADYERYAGRLVKVRTFELLADEEGNRRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +G ++G S+    L                I  D +  A L  
Sbjct: 120 TFLGDLVGLSDGVVTLTL-------REGQLARIPLDKIAKANLEF 157


>gi|150016082|ref|YP_001308336.1| hypothetical protein Cbei_1198 [Clostridium beijerinckii NCIMB
           8052]
 gi|189038629|sp|A6LSQ0|RIMP_CLOB8 RecName: Full=Ribosome maturation factor rimP
 gi|149902547|gb|ABR33380.1| protein of unknown function DUF150 [Clostridium beijerinckii NCIMB
           8052]
          Length = 152

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 11/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                L   I  +++P++ E+S     +  ++E     L+I++++ +G ++L DCE +S+
Sbjct: 1   MKKDVLIERIEELVRPIVSELSCELYYVEYVKENGEFYLRIYIDK-EGRVSLNDCEAVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ILDVE+ I+  Y LEVSSPG++R + ++  F ++ G  V   +  S    + + G 
Sbjct: 60  RVSEILDVEDPIKEAYYLEVSSPGLNRGLYKEEHFKKYIGSEVLIRLTSSLNGVKSVKGL 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +   SE    +E          E +I I  D + +A L
Sbjct: 120 LRDVSEDSILVE---------GETEIQIPRDKIKAANL 148


>gi|225570593|ref|ZP_03779618.1| hypothetical protein CLOHYLEM_06695 [Clostridium hylemonae DSM
           15053]
 gi|225160606|gb|EEG73225.1| hypothetical protein CLOHYLEM_06695 [Clostridium hylemonae DSM
           15053]
          Length = 155

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++EE  F  V +  ++E +   L+ ++++  G + + DCE++S+ +S IL
Sbjct: 8   EQKTEEILLPIVEEYGFELVDVEYVKEGSTWYLRAYIDKP-GGINIDDCEKVSRRLSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I+  Y +EVSSPG+ RP+ ++ DF R  G  V          +++  G +    +
Sbjct: 67  DEKDYIDDAYIMEVSSPGLGRPLKKEKDFKRSLGEEVEIRTYRMMDKQKEFFGILKEYDD 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
           +   + +E    K   +  IA+
Sbjct: 127 STVTIMQEDETLKTFAKSDIAL 148


>gi|182417563|ref|ZP_02948888.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237668728|ref|ZP_04528712.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182378576|gb|EDT76104.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237657076|gb|EEP54632.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 153

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                L   I ++++P+ EE+S++   +  ++E     L+I++++++G ++L DCE +S+
Sbjct: 1   MNKNMLVEKIENIVRPITEELSYKLYYVEYIKENGDFYLRIYIDKEEGRISLNDCEAVSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ILDVE+ IEG Y LEVSSPG++R +  KS F       V      +    + + G 
Sbjct: 61  RVSEILDVEDPIEGAYYLEVSSPGLNRSLHTKSHFESVLDKEVMVRFNGTIEGVKNIKGI 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    E    +E          E  I I  D + SA L
Sbjct: 121 LKEVGEDYIIVE---------GEKTIKIPNDKIKSANL 149


>gi|257465969|ref|ZP_05630280.1| putative cytoplasmic protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917125|ref|ZP_07913365.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691000|gb|EFS27835.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 153

 Score =  111 bits (277), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 11/162 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   I  ++ P  EE+    V +  +++     ++++VE+ +G++ L DC  LS  I 
Sbjct: 2   ESVVQKIEKIVIPAAEELGLSLVDVEYMQDGGYWYVRVYVEKLEGDVNLEDCASLSGKIE 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
               V+ +I+  + LEVSSPGI+RP+ ++SDF+R+ G  +   +     +K+ + G +  
Sbjct: 62  D--AVDQLIDKKFFLEVSSPGIERPLKKESDFIRFTGEKIFVALKHKLNEKRNIEGILRA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
                  LE +          ++ I F  +  + L+   +  
Sbjct: 120 YENQTLLLEVDGE--------ELQIPFSEVKKSHLVFDFDEF 153


>gi|259016317|sp|B0U1Q6|RIMP_XYLFM RecName: Full=Ribosome maturation factor rimP
          Length = 199

 Score =  111 bits (277), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 84/166 (50%), Gaps = 14/166 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDC 69
             D G+   I +++ P +E + F  +    +      +L+++++     + +  +++ DC
Sbjct: 1   MSDKGIE--IVNLLAPKVEMLGFDLLGAEYVLVPSGAILRLYIDIPFAMQPECMVSIDDC 58

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E +S+ +S  LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     +
Sbjct: 59  ERVSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSR 118

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +L GKI+         +        +N +++A+ F+++  AR++  
Sbjct: 119 RLQGKIVRVE------QVGGFVVLLVNGVELAVDFNNIDKARIVPD 158


>gi|121535259|ref|ZP_01667073.1| protein of unknown function DUF150 [Thermosinus carboxydivorans
           Nor1]
 gi|121306144|gb|EAX47072.1| protein of unknown function DUF150 [Thermosinus carboxydivorans
           Nor1]
          Length = 152

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 1/149 (0%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +  ++Q +I + +   V +  ++E+N  L++F+++  G + + DC+ +S+ 
Sbjct: 1   MSRQQVEKLVERLVQDIITDTNMELVDVEYVKERNWYLRVFLDKP-GGIEVEDCQWVSEQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +   LD  + I+  Y LEVSSPG+DRP+ +  DF+R  G  V           + ++G +
Sbjct: 60  LEVKLDELDPIKESYYLEVSSPGLDRPLKKDRDFIRHIGEKVEVHTFAPLNGSKLVVGTL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISF 164
            G SET   L+          +    +  
Sbjct: 120 TGISETDIHLDVNGTALSVPRDKTAQVKL 148


>gi|225016951|ref|ZP_03706143.1| hypothetical protein CLOSTMETH_00866 [Clostridium methylpentosum
           DSM 5476]
 gi|224950265|gb|EEG31474.1| hypothetical protein CLOSTMETH_00866 [Clostridium methylpentosum
           DSM 5476]
          Length = 177

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 12/166 (7%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEEL 72
           R+ G       ++++++P+++++      +   +   +  L++F+++ DG M + DCE +
Sbjct: 20  RMAGKGNTVSAVTALVKPIVDDLGLILWDVVFEKEGASWFLRVFIDK-DGIMEVDDCEAV 78

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ ++P+LD  + IE  Y LEVSS G+ R + R   F R+ G  V  ++  +   +++ +
Sbjct: 79  SKRLNPLLDETDPIEQSYYLEVSSAGLGRRLKRPEHFARFLGDEVTVKLYRAVDKRKEFV 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDEL 178
           G +    +    L           E +   +       +L   D+L
Sbjct: 139 GVLAAFEDNTVVLR--------EGEQEHRFAIGDCAYVKL--NDDL 174


>gi|56707227|ref|YP_169123.1| hypothetical protein FTT_0048 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669697|ref|YP_666254.1| hypothetical protein FTF0048 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115315430|ref|YP_764153.1| hypothetical protein FTH_1748 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|169656764|ref|YP_001429349.2| hypothetical protein FTA_1918 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254375032|ref|ZP_04990512.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|254874066|ref|ZP_05246776.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81598096|sp|Q5NIL9|RIMP_FRATT RecName: Full=Ribosome maturation factor rimP
 gi|122324584|sp|Q0BK68|RIMP_FRATO RecName: Full=Ribosome maturation factor rimP
 gi|123169692|sp|Q14K22|RIMP_FRAT1 RecName: Full=Ribosome maturation factor rimP
 gi|189030342|sp|A7NEJ0|RIMP_FRATF RecName: Full=Ribosome maturation factor rimP
 gi|56603719|emb|CAG44681.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320030|emb|CAL08064.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115130329|gb|ABI83516.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|151572750|gb|EDN38404.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|164551832|gb|ABU62393.2| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254840065|gb|EET18501.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 152

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 8/154 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
             L  D+  +++P+  ++ +    I ++    L ++IF++  +  +++ DC+ +S+ IS 
Sbjct: 2   KMLLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDH-ENGVSVDDCQIVSKEISA 60

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           + DVE+ + G Y LEVSSPG++R +          G  V    +   G + K  G +   
Sbjct: 61  VFDVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERV 120

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 L  E          +I+  FD L   R+
Sbjct: 121 EGNNVILNLED-------GKEISFDFDELKKLRV 147


>gi|254876276|ref|ZP_05248986.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842297|gb|EET20711.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 152

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 8/151 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
             L  D+  +++P+  ++ +    I ++    L ++IF++  +  +++ DC+ +S+ +S 
Sbjct: 2   KMLLDDLYEIVEPITADLGYILWGIEVVGAGKLTIRIFIDH-ENGVSVDDCQVVSKEVSA 60

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           I DVE+ I   Y LEVSSPG++R +          G  V    +     + K  G +   
Sbjct: 61  IFDVEDPISDKYVLEVSSPGMNRQIFNIIQAQALVGFNVKAVTLTPVESQTKFKGVLERV 120

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
                 L+ +          +++  FD L  
Sbjct: 121 EGNNVILKLDD-------GREVSFDFDELKK 144


>gi|253581489|ref|ZP_04858714.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
 gi|251836559|gb|EES65094.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
          Length = 159

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
              +   I +++ PV+ EM    V I  L++     ++I+VE  +G++TL DC  +S  +
Sbjct: 6   KENILKKIETIVTPVVNEMKLSLVDIEYLQDGGYWYVRIYVENLEGDITLEDCATISNKV 65

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              +  + +IE  + LEVSSPGI+RP+ +  D++R+ G      +     D +   G I+
Sbjct: 66  DEDI--DKLIEQRFFLEVSSPGIERPLKKIDDYIRFKGEKAKLSLKHKVNDNKNFEGIII 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
              ++  +LE E        E  I I F  +  A L+   E  
Sbjct: 124 DCRDSIIYLEVEN-------EKIIEIPFSEVRKANLVYEFEEF 159


>gi|332184779|gb|AEE27033.1| clustered with transcription termination protein NusA [Francisella
           cf. novicida 3523]
          Length = 150

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 8/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++  +  +++ DC+ +S+ +S I 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDH-ENGVSVDDCQIVSKEVSAIF 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I G Y LEVSSPG++R +          G  V    +     + K  G +     
Sbjct: 61  DVEDPISGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLSPVESQTKFKGVLERVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L+ E          +I+  FD L   R+
Sbjct: 121 NNVILKLED-------GKEISFDFDELKKLRV 145


>gi|226940849|ref|YP_002795923.1| hypothetical protein LHK_01930 [Laribacter hongkongensis HLHK9]
 gi|254800662|sp|C1D8X4|RIMP_LARHH RecName: Full=Ribosome maturation factor rimP
 gi|226715776|gb|ACO74914.1| Uncharacterized protein conserved in bacteria [Laribacter
           hongkongensis HLHK9]
          Length = 141

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 80/149 (53%), Gaps = 13/149 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+ ++++  +  + +  V   L      L+++F++     + L DC ++S  ++ +  VE
Sbjct: 2   DVRTLLETTLSGLGYELVDFEL--GHGGLMRVFIDAP-AGIALDDCVKVSNHLTRLFTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLEVSSPG+DRP+ R++D+ R+ G  V  +  L  G+++K  G ++G ++   
Sbjct: 59  NI--DYDRLEVSSPGLDRPLTREADYARFAGERVRIKTRLPIGERKKFAGTLVGLADGQV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L+ +          ++AI   S+  ARL
Sbjct: 117 ELDIDGE--------RVAIPLASIDKARL 137


>gi|89257074|ref|YP_514436.1| hypothetical protein FTL_1811 [Francisella tularensis subsp.
           holarctica LVS]
 gi|118498224|ref|YP_899274.1| hypothetical protein FTN_1662 [Francisella tularensis subsp.
           novicida U112]
 gi|134301262|ref|YP_001121230.1| hypothetical protein FTW_0124 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|167009461|ref|ZP_02274392.1| hypothetical protein Ftulh_01737 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|194324408|ref|ZP_03058181.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208780251|ref|ZP_03247593.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|224456288|ref|ZP_03664761.1| hypothetical protein FtultM_00215 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|290954350|ref|ZP_06558971.1| hypothetical protein FtulhU_09047 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312214|ref|ZP_06803014.1| hypothetical protein FtulhU_09034 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122500220|sp|Q2A1G6|RIMP_FRATH RecName: Full=Ribosome maturation factor rimP
 gi|226696298|sp|A4IW08|RIMP_FRATW RecName: Full=Ribosome maturation factor rimP
 gi|226736401|sp|A0Q8F5|RIMP_FRATN RecName: Full=Ribosome maturation factor rimP
 gi|89144905|emb|CAJ80250.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|118424130|gb|ABK90520.1| conserved protein of unknown function [Francisella novicida U112]
 gi|134049039|gb|ABO46110.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|194321473|gb|EDX18958.1| conserved hypothetical protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208743900|gb|EDZ90202.1| conserved hypothetical protein [Francisella novicida FTG]
 gi|282158335|gb|ADA77726.1| hypothetical protein NE061598_00270 [Francisella tularensis subsp.
           tularensis NE061598]
 gi|332678960|gb|AEE88089.1| clustered with transcription termination protein NusA [Francisella
           cf. novicida Fx1]
          Length = 150

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 8/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++  +  +++ DC+ +S+ IS + 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDH-ENGVSVDDCQIVSKEISAVF 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ + G Y LEVSSPG++R +          G  V    +   G + K  G +     
Sbjct: 61  DVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L  E          +I+  FD L   R+
Sbjct: 121 NNVILNLED-------GKEISFDFDELKKLRV 145


>gi|167627170|ref|YP_001677670.1| hypothetical protein Fphi_0946 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667732|ref|ZP_04755310.1| hypothetical protein FphipA2_03111 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|226696044|sp|B0TWR1|RIMP_FRAP2 RecName: Full=Ribosome maturation factor rimP
 gi|167597171|gb|ABZ87169.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 150

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++  +  +++ DC+ +S+ +S I 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGAGKLTIRIFIDH-ENGVSVDDCQVVSKEVSAIF 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ I   Y LEVSSPG++R +          G  V    +     + K  G +     
Sbjct: 61  DVEDPISDKYVLEVSSPGMNRQIFNIIQAQALVGFNVKAVTLTPVESQTKFKGVLERVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLS 169
               L+ +          +++  FD L  
Sbjct: 121 NNVILKLDD-------GREVSFDFDELKK 142


>gi|187931004|ref|YP_001890988.1| protein Lpl2691 [Francisella tularensis subsp. mediasiatica FSC147]
 gi|226696222|sp|B2SEW5|RIMP_FRATM RecName: Full=Ribosome maturation factor rimP
 gi|187711913|gb|ACD30210.1| protein Lpl2691 [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 150

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 8/152 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L  D+  +++P+  ++ +    I ++    L ++IF++  +  +++ DC+ +S+ IS + 
Sbjct: 2   LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDH-ENGVSVDDCQIVSKEISAVF 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ + G Y LEVSSPG++R +          G  V    +   G + K  G +     
Sbjct: 61  DVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEG 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L  E          +I+  FD L   R+
Sbjct: 121 NSVILNLED-------GKEISFDFDELKKLRV 145


>gi|253997781|ref|YP_003049844.1| hypothetical protein Msip34_0068 [Methylovorus sp. SIP3-4]
 gi|313199845|ref|YP_004038503.1| hypothetical protein MPQ_0074 [Methylovorus sp. MP688]
 gi|253984460|gb|ACT49317.1| protein of unknown function DUF150 [Methylovorus sp. SIP3-4]
 gi|312439161|gb|ADQ83267.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 145

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 79/152 (51%), Gaps = 11/152 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ S+++  + ++ +  V + +   +  L+++F+++ +  + + DC  +S  +  +L V
Sbjct: 2   QDLYSLLEKSVSQLGYELVDVEISN-RGKLIRLFIDKPE-GINIDDCVLVSNQLGNVLAV 59

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           EN I  + RLEVSSPG+DR + + +DF+R+ G     ++ +   +++  IG + G  +  
Sbjct: 60  ENDI-DYDRLEVSSPGLDRVLKKDADFIRFTGERAQVKLRIPVDNRKNFIGILQGIEQDN 118

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +E+E             ++  ++  ARL  
Sbjct: 119 LLIEQEGVLH--------RLALSNIDKARLAP 142


>gi|294788743|ref|ZP_06753984.1| 15 kDa protein [Simonsiella muelleri ATCC 29453]
 gi|294483225|gb|EFG30911.1| 15 kDa protein [Simonsiella muelleri ATCC 29453]
          Length = 145

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 11/149 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +++   +  + +  V   L  +    L++F++  +G +T+ DC  +S  +S +  VE
Sbjct: 2   DIQTILDTTLPGLGYELVDFELTAQG--TLRVFIDT-EGGITVEDCANVSNHLSRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+   +  LE+SSPG+DRP+ + SDF+R++G +V  +  L    ++  IGKI    E   
Sbjct: 59  NV--DYKNLEISSPGLDRPLKKASDFVRFSGSLVKIKTRLPIDGQKNFIGKIDAFDENTQ 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +          +   + I   ++  AR+
Sbjct: 117 IITL------AFDGKAVQIELSNVDKARI 139


>gi|315648099|ref|ZP_07901200.1| hypothetical protein PVOR_22524 [Paenibacillus vortex V453]
 gi|315276745|gb|EFU40088.1| hypothetical protein PVOR_22524 [Paenibacillus vortex V453]
          Length = 153

 Score =  110 bits (276), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  ++QP + E  F  V +  ++   N  L++FV   DG + + DC  +S+
Sbjct: 1   MSTSKIKTTVEEMVQPYLNEHGFELVDVEYVKEGSNWFLRVFV-DKDGGIDIDDCGLISE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + I   Y LEVSSPG +RP+ +K D  +  G  V   +       ++  GK
Sbjct: 60  YLSQKLDENDPIPTAYFLEVSSPGAERPLKKKEDVAKSVGKNVFVTVYEPINGLKEFEGK 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +         ++          + Q  I +  + SARL 
Sbjct: 120 LESFDNEELVIQ--------TVKKQYVIPYAKVASARLA 150


>gi|317133696|ref|YP_004093010.1| protein of unknown function DUF150 [Ethanoligenens harbinense
           YUAN-3]
 gi|315471675|gb|ADU28279.1| protein of unknown function DUF150 [Ethanoligenens harbinense
           YUAN-3]
          Length = 165

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +     +   + ++  PV E +      I  ++   +  L+I++++ DG + + DCE  S
Sbjct: 1   MAAGKSVVSRVEALALPVAETLGLSIWDIEYVKEGASWFLRIYIDK-DGGVGIEDCEAFS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLI 132
           +AI   LD  ++I   Y LEVSSPGI+R + R + F  + G  V   ++      ++++ 
Sbjct: 60  RAIDGPLDEADLIPQQYYLEVSSPGIERELKRDAHFQAFIGKKVHVRLIRPLEDGRREVN 119

Query: 133 GKIMGTSETGFFLEKEK 149
           G +   ++    LE  +
Sbjct: 120 GTLTAFADGTLTLETPE 136


>gi|182680748|ref|YP_001828908.1| hypothetical protein XfasM23_0177 [Xylella fastidiosa M23]
 gi|226695961|sp|B2I724|RIMP_XYLF2 RecName: Full=Ribosome maturation factor rimP
 gi|259016318|sp|Q87EV6|RIMP_XYLFT RecName: Full=Ribosome maturation factor rimP
 gi|182630858|gb|ACB91634.1| protein of unknown function DUF150 [Xylella fastidiosa M23]
          Length = 199

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 14/166 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDC 69
             D G+   I +++ P +E + F  +    L      +L+++++     + +  +++ DC
Sbjct: 1   MSDKGIE--IVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDC 58

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E +S+ +S  LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     +
Sbjct: 59  ERVSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSR 118

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +L GKI+         +        +N +++A+ F+++  AR++  
Sbjct: 119 RLQGKIVRVE------QVGGFVVLLVNGVELAVDFNNIDKARIVPD 158


>gi|167037625|ref|YP_001665203.1| hypothetical protein Teth39_1213 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|307264911|ref|ZP_07546473.1| protein of unknown function DUF150 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|320116040|ref|YP_004186199.1| hypothetical protein Thebr_1242 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|326389439|ref|ZP_08211006.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           JW 200]
 gi|226696278|sp|B0K9Q4|RIMP_THEP3 RecName: Full=Ribosome maturation factor rimP
 gi|166856459|gb|ABY94867.1| protein of unknown function DUF150 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|306920169|gb|EFN50381.1| protein of unknown function DUF150 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|319929131|gb|ADV79816.1| protein of unknown function DUF150 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325994444|gb|EGD52869.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 151

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 2/136 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +      ++ PV+E+ +F  V +   +   +  L++++++ +G +TL DC+ +S+ +S
Sbjct: 2   SKIEQIAKDLVMPVLEKNNFELVDVEYKKEGSHWYLRVYIDK-EGGITLDDCQLVSEYLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++ 
Sbjct: 61  DRLDEVDPIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYAPIDKRKKFEGELIE 120

Query: 138 TSETGFFLEKEKRGEK 153
            +     +      ++
Sbjct: 121 FTGDKIIILYNGERKE 136


>gi|118579396|ref|YP_900646.1| hypothetical protein Ppro_0960 [Pelobacter propionicus DSM 2379]
 gi|259586175|sp|A1AML8|RIMP_PELPD RecName: Full=Ribosome maturation factor rimP
 gi|118502106|gb|ABK98588.1| protein of unknown function DUF150 [Pelobacter propionicus DSM
           2379]
          Length = 161

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 83/161 (51%), Gaps = 14/161 (8%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   I ++  PVI+ M+   V++      +  +L++F+++ +G +TL DC +LS+ +S 
Sbjct: 7   DICDRIRTLALPVIDSMNLELVEVEYKRSGREAVLRLFIDK-EGGVTLDDCADLSRELST 65

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQKLIG 133
           +LDVE++I   Y LEVSSPG+DRP+  ++D+ R++G ++         D     ++  +G
Sbjct: 66  LLDVEDLIPCEYSLEVSSPGLDRPLKSEADYERFSGRLIKVRTYEPYQDDAGNRRKTFLG 125

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++ G  +    +               +I  + +  A+L  
Sbjct: 126 RLEGLKDGSVVMSL-------TEGQTASIPLERIAKAQLEF 159


>gi|261407940|ref|YP_003244181.1| hypothetical protein GYMC10_4147 [Paenibacillus sp. Y412MC10]
 gi|329929353|ref|ZP_08283106.1| hypothetical protein HMPREF9412_5355 [Paenibacillus sp. HGF5]
 gi|261284403|gb|ACX66374.1| protein of unknown function DUF150 [Paenibacillus sp. Y412MC10]
 gi|328936722|gb|EGG33165.1| hypothetical protein HMPREF9412_5355 [Paenibacillus sp. HGF5]
          Length = 153

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   +  ++QP ++E  F  V +  ++   N  L++FV   DG + + DC  +S+
Sbjct: 1   MSTSKIKTTVEEMVQPYLDEHGFELVDVEYVKEGSNWFLRVFV-DKDGGIDIDDCGLISE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  LD  + I   Y LEVSSPG +RP+ +K D  +  G  V   +       ++  GK
Sbjct: 60  HLSQKLDENDPIPTAYFLEVSSPGAERPLKKKEDVAKSVGKNVFVTVYEPINGLKEFEGK 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +         ++  K+           I +  + SARL 
Sbjct: 120 LESFDNEELVIQTAKKQHV--------IPYAKVASARLA 150


>gi|77359941|ref|YP_339516.1| hypothetical protein PSHAa0995 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874852|emb|CAI86073.1| conserved protein of unknown function (yhbC) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 141

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 68/147 (46%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P +E + F    +  +   ++  L++++   +  +++ +C + S+ IS ILDVE+ I
Sbjct: 1   MLTPAVEMLGFELHGLEFVQAGRHSTLRVYITH-EAGISVDNCADASRQISAILDVEDPI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LEVSSPG+DR + ++  + +  G  V     L    ++   G ++  +     L 
Sbjct: 60  TNEYDLEVSSPGVDRLLFKQDHYEQAQGEEVQLRTKLPQDGRRNFKGDLIAVTSDMITLS 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLI 173
            +          +  I   ++  A +I
Sbjct: 120 SDG--------TEHLIMLSNIERANII 138


>gi|51246467|ref|YP_066351.1| hypothetical protein DP2615 [Desulfotalea psychrophila LSv54]
 gi|81641363|sp|Q6AJY2|RIMP_DESPS RecName: Full=Ribosome maturation factor rimP
 gi|50877504|emb|CAG37344.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 151

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 9/159 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                   I   +  V++ M    V I    E    +L++F++  +G +TL  C ++S+ 
Sbjct: 1   MSEAAVEKIEGYVASVLQSMDVELVDIQFRCEGHGWVLRLFID-VEGGVTLDLCAQVSRE 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +   LDVE++IE  Y LEVSSPG++RP+   ++F R+ G     ++      ++   G I
Sbjct: 60  VGQYLDVEDVIEQAYHLEVSSPGVERPLKSLANFERFAGKKARIKLHEPLNGEKTFEGII 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +    L  + +              + L  ARL++
Sbjct: 120 GPVEDGEVSLLVDGKIAVKCG-------IEQLNKARLVL 151


>gi|317471573|ref|ZP_07930919.1| hypothetical protein HMPREF1011_01267 [Anaerostipes sp. 3_2_56FAA]
 gi|316900952|gb|EFV22920.1| hypothetical protein HMPREF1011_01267 [Anaerostipes sp. 3_2_56FAA]
          Length = 154

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 10/162 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           + G   +      ++ P+I+E  F  V +  ++   N  L+I+ ++ +G +++ DC  +S
Sbjct: 1   MAGKAEIEQKTEELVTPIIDENHFELVDVEYVKEGANWYLRIYADK-EGGISIDDCVLIS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+   LD ++ I+  Y LEVSSPG+ RP+ ++ DF R  G  V  ++  +   +++  G
Sbjct: 60  RALEAKLDADDFIKDAYILEVSSPGLGRPLKKEKDFQRSIGQSVDIKLYKAIDKQKEFTG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            +   S+    L  +   +             S+ SARL + 
Sbjct: 120 ILKEYSKERIILSIDGTDQ--------EFETKSVASARLSLD 153


>gi|300691723|ref|YP_003752718.1| hypothetical protein RPSI07_2078 [Ralstonia solanacearum PSI07]
 gi|299078783|emb|CBJ51443.1| conserved protein of unknown function [Ralstonia solanacearum
           PSI07]
          Length = 149

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 4/139 (2%)

Query: 36  MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
           M +  V++        LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVS
Sbjct: 1   MGYELVEVERAPAG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--NYERLEVS 56

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDM 155
           SPG+DRP+   +DF R+ G      + L    ++   G +   +            E   
Sbjct: 57  SPGLDRPLRTLTDFTRFAGQEAKVTLRLPVNGQKNFTGIVQAPAGEPGQERIGLEFEGKD 116

Query: 156 NELQIAISFDSLLSARLIV 174
               +  +   L  ARL+ 
Sbjct: 117 GPALLEFTLSELDRARLVP 135


>gi|259046784|ref|ZP_05737185.1| BCR/YhbC family protein [Granulicatella adiacens ATCC 49175]
 gi|259036552|gb|EEW37807.1| BCR/YhbC family protein [Granulicatella adiacens ATCC 49175]
          Length = 167

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 8/160 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   ++ + + VI++  F    +  ++  KN  L+ ++++  G + L DC  +S+ 
Sbjct: 10  AMSKVTETVTELTRDVIQKEGFELFDLEFVKEGKNWFLRFYLDKP-GGIDLDDCAFMSEK 68

Query: 76  ISPILDVE--NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            S ILD +  + I   Y LEVSSPG +RP+  + +     G  V      +   ++ L G
Sbjct: 69  FSEILDAQNPDPIPQAYFLEVSSPGAERPLRNEEELKAAIGSYVHLSFYQNIEGEKFLEG 128

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            ++   E    L  + +        +  I   ++  ARL 
Sbjct: 129 TLLSVDEETVTLNVQIK----TRTKEFTIERKNIAKARLA 164


>gi|256750787|ref|ZP_05491672.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256750370|gb|EEU63389.1| protein of unknown function DUF150 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 151

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 70/136 (51%), Gaps = 2/136 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +      ++ P++E+ +F  V +   +   +  L++++++ +G +TL DC+ +S+ +S
Sbjct: 2   SKIEQIAKDLVMPILEKNNFELVDVEYKKEGSHWYLRVYIDK-EGGITLDDCQLVSEYLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++ 
Sbjct: 61  DRLDEVDPIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYSPIDKRKKFEGELIE 120

Query: 138 TSETGFFLEKEKRGEK 153
            +     +      ++
Sbjct: 121 FTGDKIIILYNGERKE 136


>gi|304316866|ref|YP_003852011.1| hypothetical protein Tthe_1413 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778368|gb|ADL68927.1| protein of unknown function DUF150 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 151

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +     +++ P IE+ +F  V +   +   N  L++++++ +G ++L DC+ +S+ +S
Sbjct: 2   SRIEELTRNLVAPAIEKNNFELVDVEYKKEGNNWYLRVYIDK-EGGVSLDDCQIISEYLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + IE  Y LEVSSPGIDRP+  + DF ++ G +V   +      K+K  G+++G
Sbjct: 61  EKLDEVDPIENSYILEVSSPGIDRPLKTQRDFDKFKGSLVEVSLYQPIDKKKKYEGELVG 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                  +      +            + +   +
Sbjct: 121 LINDKVVITDNGERK--------EFDINDISLVK 146


>gi|94971245|ref|YP_593293.1| hypothetical protein Acid345_4219 [Candidatus Koribacter versatilis
           Ellin345]
 gi|259585655|sp|Q1IIT1|RIMP_ACIBL RecName: Full=Ribosome maturation factor rimP
 gi|94553295|gb|ABF43219.1| protein of unknown function DUF150 [Candidatus Koribacter
           versatilis Ellin345]
          Length = 169

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 13/164 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++ V  +     V++      K  +L+I +++ +  +T  DC  +S  +S ILD
Sbjct: 5   EKVREIVERVARDYGLEVVEVEFRGGGKARMLRITIDKPE-GVTHDDCSHVSNEVSTILD 63

Query: 82  VENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           VE+++ G  Y LEVSSPG+DR + + +DF R+ G +V           +   G++   ++
Sbjct: 64  VEDVVPGASYTLEVSSPGLDRKISKPADFERFTGSLVKVSTREPLDGNRHFEGRLESFAD 123

Query: 141 TGFFLEK----------EKRGEKDMNELQIAISFDSLLSARLIV 174
               ++           +K  +  + E ++ I+   +  A L+ 
Sbjct: 124 GKLTIDLNAVPQRGQKKQKGPKAPVVERKVEIALADVEKANLVP 167


>gi|317153846|ref|YP_004121894.1| hypothetical protein Daes_2142 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944097|gb|ADU63148.1| protein of unknown function DUF150 [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 156

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 74/158 (46%), Gaps = 6/158 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                   ++ +I+P +E +      ++   + +  +++I+++  D  +T+  C ++S+ 
Sbjct: 1   MRPTFEDTLADIIRPEVEGLGCTLWGLASPSKGERRIIRIYIDGPD-GVTIDQCAKVSRQ 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +L+VE+ I G Y LEVSSPG+DR     +    + G  V   +  +   ++K+ G +
Sbjct: 60  VSLLLEVEDTIPGAYILEVSSPGLDRRFFSTAQMADFVGKQVTALLYEARDGRRKVTGVL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                       ++    D     + ++++ L   RL+
Sbjct: 120 KSIGADAG----QESFTLDEGGQDVTLAWNDLKEVRLV 153


>gi|227510251|ref|ZP_03940300.1| protein of hypothetical function DUF150 [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227513180|ref|ZP_03943229.1| protein of hypothetical function DUF150 [Lactobacillus buchneri
           ATCC 11577]
 gi|227524395|ref|ZP_03954444.1| protein of hypothetical function DUF150 [Lactobacillus hilgardii
           ATCC 8290]
 gi|227083561|gb|EEI18873.1| protein of hypothetical function DUF150 [Lactobacillus buchneri
           ATCC 11577]
 gi|227088626|gb|EEI23938.1| protein of hypothetical function DUF150 [Lactobacillus hilgardii
           ATCC 8290]
 gi|227189903|gb|EEI69970.1| protein of hypothetical function DUF150 [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 157

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 76/158 (48%), Gaps = 8/158 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++P++++ +F    +  ++E K+  L++++++  G +T+ DC  +S  +S
Sbjct: 2   SNVVETVKQVVKPILDKHTFYLFDVEFVKENKSWYLRVYIDKK-GGITIDDCVLVSDELS 60

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+    +  +  G  +   +  +   ++   G +
Sbjct: 61  EKLDEMDPDPIPQQYFLEVSSPGAERPLRNDEELQQAVGEYIHISLYQNLNGQKAFEGFL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              +     L+ +K G+ D     I I  + +  +RL 
Sbjct: 121 RSVTSDELVLQNDKWGKND----TINIPRNLIAKSRLA 154


>gi|168180699|ref|ZP_02615363.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|182668569|gb|EDT80548.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
          Length = 153

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  ++   I+P+ E + +    I  ++  K   L+I+++  +  ++L  CE++S+
Sbjct: 1   MSKHSLIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDS-ENGVSLEGCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+
Sbjct: 60  AISELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSPIDKKKKYEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +E    ++ E        E  + I  + +  A L
Sbjct: 120 LVDFNENEIDIKVE--------ENIVTIPREKISKATL 149


>gi|167772659|ref|ZP_02444712.1| hypothetical protein ANACOL_04040 [Anaerotruncus colihominis DSM
           17241]
 gi|167665137|gb|EDS09267.1| hypothetical protein ANACOL_04040 [Anaerotruncus colihominis DSM
           17241]
          Length = 159

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 63/138 (45%), Gaps = 2/138 (1%)

Query: 26  SSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
            ++  PV + M      ++  +      L+ +++R +G +T+ +CE  S+ +S +LD  +
Sbjct: 16  EALAAPVAQRMGLYLWDVAFEKEGAGWYLRYYIDR-EGGVTIDECEAFSREVSDLLDEAD 74

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            I+  Y LEV SPG++R + +   F ++ G  V   ++     ++  +G +         
Sbjct: 75  PIDQSYTLEVGSPGVERKLTKDWHFQKYIGAQVHVRLIRPVEGERDFVGALSSYENGVVA 134

Query: 145 LEKEKRGEKDMNELQIAI 162
           +  +   E   +  + A 
Sbjct: 135 VLLDDELEMTFSPGETAF 152


>gi|260550520|ref|ZP_05824730.1| UPF0090 protein [Acinetobacter sp. RUH2624]
 gi|260406435|gb|EEW99917.1| UPF0090 protein [Acinetobacter sp. RUH2624]
          Length = 174

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-------------- 60
                 +  +  +I P ++        I  L   K  LL+I+++R               
Sbjct: 1   MKLSNKSQALYDMIAPAVQACGVDLWGIEFLPQGKRSLLRIYIDRPVDENAEPVINEDGE 60

Query: 61  ---DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  V
Sbjct: 61  VEQGRGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQSYIGQQV 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E  G+       + I  +++  A LI  D
Sbjct: 121 ALRLIAAVENRRKFQAKLLAVDLENEEIKVEVEGK-----HVLDIDSNNIDKANLIYQD 174


>gi|162454077|ref|YP_001616444.1| hypothetical protein sce5801 [Sorangium cellulosum 'So ce 56']
 gi|259586198|sp|A9G896|RIMP_SORC5 RecName: Full=Ribosome maturation factor rimP
 gi|161164659|emb|CAN95964.1| hypothetical protein sce5801 [Sorangium cellulosum 'So ce 56']
          Length = 208

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 20/177 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDG-----NMTLRDCEELSQAIS 77
            +   + PV+       V +  + E     L++ +ER++       +TL DC ++S+ +S
Sbjct: 13  RVRDAVAPVLASHGVTLVDLEWITERAGWTLRLTIERENADDAGGGVTLEDCADVSRDVS 72

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS-SGDKQKLIGKIM 136
            +LDVE++I  HY LEVSSPG+DR +   ++F R+ G     ++       ++ L G+++
Sbjct: 73  SVLDVEDLIPNHYNLEVSSPGLDRRLRTAAEFARFLGRTAKVKLARPAPDGQRLLRGELL 132

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA---SLNNYGSYA 190
              E    +  + +        +IA+ F  +  ARL+   EL              A
Sbjct: 133 EAPEGQVAVLVDGK--------RIAVPFADVAEARLVF--ELTAQPKKGQRQGKEPA 179


>gi|239907794|ref|YP_002954535.1| hypothetical protein DMR_31580 [Desulfovibrio magneticus RS-1]
 gi|239797660|dbj|BAH76649.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 189

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 13/168 (7%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVE--------RDDGNMT 65
           +     +A  +  +I P    +      + L       L++++++         +   +T
Sbjct: 1   MLQKNAVADAVRDLIAPYAATLGLAVWGVELASAGHRQLVRLYLDLAADTPRTPERLGVT 60

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
           + +C  +S+ +  +L+V+ I    Y LEVSSPG+ R        L + G  +  ++ +  
Sbjct: 61  IDECARVSRHLGALLEVDEIFHNPYVLEVSSPGLSRRFFEAGQLLAYVGREIEAKLAVPR 120

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +++  G + G S+    +  +        E  I+  F      RLI
Sbjct: 121 EGRKRFKGILSGVSDQTVSMTVD----PGAKEFSISFDFAEADKIRLI 164


>gi|167040286|ref|YP_001663271.1| hypothetical protein Teth514_1649 [Thermoanaerobacter sp. X514]
 gi|300914370|ref|ZP_07131686.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X561]
 gi|307724394|ref|YP_003904145.1| hypothetical protein Thet_1251 [Thermoanaerobacter sp. X513]
 gi|226736395|sp|B0K1E0|RIMP_THEPX RecName: Full=Ribosome maturation factor rimP
 gi|166854526|gb|ABY92935.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X514]
 gi|300889305|gb|EFK84451.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X561]
 gi|307581455|gb|ADN54854.1| protein of unknown function DUF150 [Thermoanaerobacter sp. X513]
          Length = 151

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 70/136 (51%), Gaps = 2/136 (1%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +      ++ P++E+ +F  V +   +   +  L++++++ +G +TL DC+ +S+ +S
Sbjct: 2   SKIEQIAKDLVMPILEKNNFELVDVEYKKEGSHWYLRVYIDK-EGGITLDDCQLVSEYLS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + IE  Y LEVSSPG+DRP+ +  DF R  G  +   +      ++K  G+++ 
Sbjct: 61  DRLDEVDPIEHSYILEVSSPGLDRPLKKPRDFERNIGKEIEISLYTPIDKRKKFEGELIE 120

Query: 138 TSETGFFLEKEKRGEK 153
            +     +      ++
Sbjct: 121 FTGDKIIILYNGERKE 136


>gi|85710532|ref|ZP_01041596.1| hypothetical protein NAP1_08982 [Erythrobacter sp. NAP1]
 gi|85687710|gb|EAQ27715.1| hypothetical protein NAP1_08982 [Erythrobacter sp. NAP1]
          Length = 188

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 17/170 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL----EEKNLLLQIFVERDDGN-MTLRDCEELSQAIS 77
             ++ +I+P  E + F  V++ ++     +    LQI  E      + +  C ELS+ +S
Sbjct: 5   ARLTDLIEPEAEALGFELVRVKMMPSEAGDGGEALQIMAEDPATGQLVIEQCAELSRRVS 64

Query: 78  PILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ++D      E +IEG Y LEVSSPGIDRP+ R+ DF  W GH     +      ++   
Sbjct: 65  DMIDAREEAGEVLIEGAYHLEVSSPGIDRPLTREKDFANWAGHEARIVMTKGFDGQRVYK 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
           G++ G       +   K GE         +  D + SA+L +TD+L+ A+
Sbjct: 125 GELGGVENGMVTITDAKAGEAK-------LPQDQIHSAKLELTDKLIAAT 167


>gi|262377016|ref|ZP_06070242.1| UPF0090 protein [Acinetobacter lwoffii SH145]
 gi|262308054|gb|EEY89191.1| UPF0090 protein [Acinetobacter lwoffii SH145]
          Length = 174

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD-------------- 60
                    +  +I P +E  +     I  L +    LL+I++++               
Sbjct: 1   MKLSNKTQALQDLIAPAVEACNVNLWGIEFLPQGKCSLLRIYIDKPVDESVAPAINEDGE 60

Query: 61  ---DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + GH V
Sbjct: 61  EEQGRGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQMSGYIGHTV 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E   +       + I   ++  A L+  D
Sbjct: 121 ALRLISAVDNRRKFQAKLVAVDLENEMIQVEVEKQ-----QVLEIDSHNIDKANLVFQD 174


>gi|225572727|ref|ZP_03781482.1| hypothetical protein RUMHYD_00916 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039900|gb|EEG50146.1| hypothetical protein RUMHYD_00916 [Blautia hydrogenotrophica DSM
           10507]
          Length = 155

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 75/142 (52%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P++E   F  V +  ++E  N  L++++++ +G +T+ DCE +S+A S +L
Sbjct: 8   EQRAEEMILPLVEAQRFELVDVEYVKEAGNWYLRVYIDK-EGGITVDDCELISRAFSDLL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  + IE  Y LEVSSPG+ RP+ ++ D+ R  G  +          +++  G ++    
Sbjct: 67  DEADFIEDSYILEVSSPGLGRPLKKEKDYARSMGKELEIRTYRPIDKQKEFYGILLAYDN 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +E++ +  +   + +IA+
Sbjct: 127 NSVTIEEQDKTRRTFEKKEIAL 148


>gi|169797409|ref|YP_001715202.1| hypothetical protein ABAYE3440 [Acinetobacter baumannii AYE]
 gi|184156668|ref|YP_001845007.1| hypothetical protein ACICU_00348 [Acinetobacter baumannii ACICU]
 gi|213155777|ref|YP_002317822.1| hypothetical protein AB57_0413 [Acinetobacter baumannii AB0057]
 gi|215484848|ref|YP_002327085.1| hypothetical protein ABBFA_003201 [Acinetobacter baumannii
           AB307-0294]
 gi|239500932|ref|ZP_04660242.1| hypothetical protein AbauAB_01325 [Acinetobacter baumannii AB900]
 gi|260556301|ref|ZP_05828520.1| UPF0090 protein [Acinetobacter baumannii ATCC 19606]
 gi|301346316|ref|ZP_07227057.1| hypothetical protein AbauAB0_08725 [Acinetobacter baumannii AB056]
 gi|301513269|ref|ZP_07238506.1| hypothetical protein AbauAB05_16841 [Acinetobacter baumannii AB058]
 gi|301596449|ref|ZP_07241457.1| hypothetical protein AbauAB059_11562 [Acinetobacter baumannii
           AB059]
 gi|332855374|ref|ZP_08435839.1| hypothetical protein HMPREF0021_03428 [Acinetobacter baumannii
           6013150]
 gi|332867630|ref|ZP_08437762.1| hypothetical protein HMPREF0020_01378 [Acinetobacter baumannii
           6013113]
 gi|332873076|ref|ZP_08441033.1| hypothetical protein HMPREF0022_00636 [Acinetobacter baumannii
           6014059]
 gi|226703746|sp|B7H117|RIMP_ACIB3 RecName: Full=Ribosome maturation factor rimP
 gi|226703825|sp|B0VE83|RIMP_ACIBY RecName: Full=Ribosome maturation factor rimP
 gi|226703842|sp|B2I2M5|RIMP_ACIBC RecName: Full=Ribosome maturation factor rimP
 gi|226703866|sp|A3M1K2|RIMP_ACIBT RecName: Full=Ribosome maturation factor rimP
 gi|226706136|sp|B7I3R7|RIMP_ACIB5 RecName: Full=Ribosome maturation factor rimP
 gi|169150336|emb|CAM88233.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|183208262|gb|ACC55660.1| uncharacterized protein conserved in bacteria [Acinetobacter
           baumannii ACICU]
 gi|193076181|gb|ABO10796.2| hypothetical protein A1S_0334 [Acinetobacter baumannii ATCC 17978]
 gi|213054937|gb|ACJ39839.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
 gi|213988150|gb|ACJ58449.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|260410356|gb|EEX03655.1| UPF0090 protein [Acinetobacter baumannii ATCC 19606]
 gi|322506555|gb|ADX02009.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
 gi|323516434|gb|ADX90815.1| hypothetical protein ABTW07_0378 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727506|gb|EGJ58932.1| hypothetical protein HMPREF0021_03428 [Acinetobacter baumannii
           6013150]
 gi|332733824|gb|EGJ64971.1| hypothetical protein HMPREF0020_01378 [Acinetobacter baumannii
           6013113]
 gi|332738588|gb|EGJ69458.1| hypothetical protein HMPREF0022_00636 [Acinetobacter baumannii
           6014059]
          Length = 174

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-------------- 60
                 +  +  +I P +E        I  L   K  LL+I+++R               
Sbjct: 1   MKLSNKSQALYDMIAPAVEACGVDLWGIEFLPQGKRSLLRIYIDRPVDENAEPVINEDGE 60

Query: 61  ---DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + + DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  V
Sbjct: 61  VEQGRGIGVEDCVRVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLEQLQGYIGQQV 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E  G+       + I  +++  A LI  D
Sbjct: 121 ALRLIAAVENRRKFQAKLLAVDLENEEIQVEVEGK-----HVLDIDSNNIDKANLIYQD 174


>gi|199597101|ref|ZP_03210533.1| hypothetical protein LRH_07196 [Lactobacillus rhamnosus HN001]
 gi|258508611|ref|YP_003171362.1| hypothetical protein LGG_01616 [Lactobacillus rhamnosus GG]
 gi|258539790|ref|YP_003174289.1| hypothetical protein LC705_01599 [Lactobacillus rhamnosus Lc 705]
 gi|199591905|gb|EDY99979.1| hypothetical protein LRH_07196 [Lactobacillus rhamnosus HN001]
 gi|257148538|emb|CAR87511.1| Conserved hypotehtical protein [Lactobacillus rhamnosus GG]
 gi|257151466|emb|CAR90438.1| Conserved hypotehtical protein [Lactobacillus rhamnosus Lc 705]
 gi|259649918|dbj|BAI42080.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 159

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 74/161 (45%), Gaps = 8/161 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++++++P++++  F    +  ++      L++++++  G +TL +C  +S+
Sbjct: 1   MSTQSVVETVTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDKP-GGITLDECVLVSE 59

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           A+S  LD    + I   Y LEVSSPG +RP+ R++D+ +  G  +   +      K+   
Sbjct: 60  ALSEQLDAINPDPIPQQYFLEVSSPGAERPLKRETDYEQAIGDYIHVSLFKKLDGKKVFE 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G +         L  + +  K        I    + SARL 
Sbjct: 120 GTLKDLKPDQLTLTVKDKSRKFDQ----VIDRKLIASARLA 156


>gi|307579212|gb|ADN63181.1| hypothetical protein XFLM_06240 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 176

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 14/166 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----RDDGNMTLRDC 69
             D G+   I +++ P +E + F  +    L      +L+++++     + +  +++ DC
Sbjct: 1   MSDKGIE--IVNLLAPKVEMLGFDLLGAEYLLVPSGAILRLYIDIPFAMQPECMVSIDDC 58

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E +S+ +S  LD+E  I G+Y LEVSSPG+DR +     F R + H+V   + L     +
Sbjct: 59  ERVSREVSAYLDLEEPISGNYTLEVSSPGLDRRLFTLEQFARHHNHLVKVGLKLQQHGSR 118

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +L GKI+         +        +N +++A+ F+++  AR++  
Sbjct: 119 RLQGKIVRVE------QVGGFVVLLVNGVELAVDFNNIDKARIVPD 158


>gi|218133588|ref|ZP_03462392.1| hypothetical protein BACPEC_01457 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990963|gb|EEC56969.1| hypothetical protein BACPEC_01457 [Bacteroides pectinophilus ATCC
           43243]
          Length = 155

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 75/148 (50%), Gaps = 2/148 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P+I+   F  V +  ++   +  L++++++ DG +T+ DCE++S+A + IL
Sbjct: 8   EKKTEELITPLIDAEGFELVDVEYVKEGADWYLRVYIDK-DGGITVNDCEKISRAFNEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y  EVSSPG+ RP+ +  D+ R  G ++  ++       ++   ++    +
Sbjct: 67  DREDYIDDAYIFEVSSPGLLRPLKKDKDYQRNLGKLLEVKLFAPLNGVKEFEAELKSYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLL 168
               L  +   E  +   +I++   ++ 
Sbjct: 127 ESATLVMDDDTEVTVKRSEISLIRPAIE 154


>gi|238924308|ref|YP_002937824.1| hypothetical protein EUBREC_1947 [Eubacterium rectale ATCC 33656]
 gi|259585772|sp|C4ZBF8|RIMP_EUBR3 RecName: Full=Ribosome maturation factor rimP
 gi|238875983|gb|ACR75690.1| protein of unknown function DUF150 [Eubacterium rectale ATCC 33656]
 gi|291525078|emb|CBK90665.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
           DSM 17629]
 gi|291529173|emb|CBK94759.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
           M104/1]
          Length = 155

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
                S IQP+++ M+F  V +  ++E  +  L+ ++++ +G +T+ DCE +++ ++ IL
Sbjct: 8   EAKTESFIQPILDSMNFELVDVEYVKEGGMNYLRAYIDK-EGGITVDDCEVVARQMNEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I   Y  EVSSPG+ RP+ ++ D++R     +      +    ++  G +    +
Sbjct: 67  DREDYIPDSYTFEVSSPGLGRPLKKEKDYVRNMNKEIEIRTYRAINKSKEFYGLLKAYDK 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   E   N+  IA+
Sbjct: 127 DTVTITDEDGNETTFNKSDIAL 148


>gi|332968910|gb|EGK07957.1| protein of hypothetical function DUF150 [Kingella kingae ATCC
           23330]
          Length = 145

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 15/151 (9%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           DI +++   +  + +  V   L  +    L++F+++ +G +T+ DC  +S  ++ +  VE
Sbjct: 2   DIQNILDTTLPGLGYELVDFELTAQG--TLRVFIDK-EGGITVEDCATVSNHLNRVFMVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE--T 141
           ++   +  LE+SSPG+DRP+ + SDF+R+ G     +  L    ++  IG+I    E   
Sbjct: 59  DV--DYKNLEISSPGLDRPLKKASDFVRFAGSQAKIKTRLPVDGQKNFIGRIESFDEATQ 116

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              L  + +           I   ++  AR+
Sbjct: 117 MITLSFDGKVA--------QIELSNVDKARI 139


>gi|94986975|ref|YP_594908.1| transcription elongation factor [Lawsonia intracellularis
           PHE/MN1-00]
 gi|167013025|sp|Q1MQZ0|RIMP_LAWIP RecName: Full=Ribosome maturation factor rimP
 gi|94731224|emb|CAJ54587.1| transcription elongation factor [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 196

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 68/171 (39%), Gaps = 17/171 (9%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMT 65
            L   I+ +I P+I     +   I L+     +++IFV+                   +T
Sbjct: 5   ALIETITQLISPLITAQGLKLWGIELINIPQPIIKIFVDTIETNRLHENNIINSKSEQIT 64

Query: 66  LRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS- 124
           +  C  LS+ I   L+VE +    + LEVSSPG++R          +  H +   +    
Sbjct: 65  IEQCASLSRLIGLTLEVEELFPNKWTLEVSSPGLERSFFTIQQLSNYINHDIDVTLKEQH 124

Query: 125 --SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               +++K  G ++  ++  F L       K      ++I++  +  A L+
Sbjct: 125 PLWPNRKKFYGTLISITDNTFMLNLSLAHRKSDEPENVSINWQQVRKATLV 175


>gi|262370082|ref|ZP_06063409.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315121|gb|EEY96161.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 174

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 72/179 (40%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--------------- 59
                    +  +I P ++        I  L   K  LL+I++++               
Sbjct: 1   MKLSNKTQALQDLIAPAVQACGVDLWGIEFLPQGKRSLLRIYIDKAVDENAEPIINEDGE 60

Query: 60  --DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + ++DC  ++Q +  ++DV + I G Y LEVSSPG DRP  +      + G  +
Sbjct: 61  EEQGRGIGVQDCVRVTQQVGAMMDVHDPISGEYALEVSSPGWDRPFFQLEQLPAYIGQQI 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E   +       + I  +++  A L+  D
Sbjct: 121 AFRLISAVDNRRKFQAKLVAVDLEAEMIQVEVEKQ-----QVLEIDSNNIDKANLVYQD 174


>gi|166030877|ref|ZP_02233706.1| hypothetical protein DORFOR_00557 [Dorea formicigenerans ATCC
           27755]
 gi|166029144|gb|EDR47901.1| hypothetical protein DORFOR_00557 [Dorea formicigenerans ATCC
           27755]
          Length = 157

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 4/144 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++EE+ F  V +  ++E +   L+ ++++  G +T+ DCE +S+ +S IL
Sbjct: 8   EQKTEEILNPIMEELEFELVDVEYVKEGSMWYLRAYIDKP-GGITVNDCEAVSRRLSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS- 139
           D ++ IE  Y LEVSSPG+ RP+ ++ D+ R  G  V          K++  G +     
Sbjct: 67  DEKDFIEDSYVLEVSSPGLGRPLKKEKDYKRNLGKEVEIRTYRMVDKKKEFTGLLDSYDY 126

Query: 140 -ETGFFLEKEKRGEKDMNELQIAI 162
                 +E E    K   +  IA+
Sbjct: 127 EAGTVTIELEDGTMKTFEKGDIAL 150


>gi|323144580|ref|ZP_08079169.1| hypothetical protein HMPREF9444_01845 [Succinatimonas hippei YIT
           12066]
 gi|322415656|gb|EFY06401.1| hypothetical protein HMPREF9444_01845 [Succinatimonas hippei YIT
           12066]
          Length = 175

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 8/155 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I  +++P+IE        +     ++  LLQIF++  D  ++   C +++  +SP 
Sbjct: 18  IEEKIDELVRPLIEASDLILWGVRYRGGRDSALLQIFIDSKD-GVSADTCGDITNMLSPA 76

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  +II   Y LEVSSPG DR +        + G  +  E+ +  G ++K  G +   +
Sbjct: 77  LDAADIIAPAYILEVSSPGFDRILFTLDQARAYIGKKIKAEVRIPVGGRRKFEGVLEEVT 136

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    L+   +        Q+ I+F ++  ARL+ 
Sbjct: 137 EDN-SLKINDKI-----SGQVEIAFSNISVARLVP 165


>gi|160940463|ref|ZP_02087808.1| hypothetical protein CLOBOL_05353 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437043|gb|EDP14810.1| hypothetical protein CLOBOL_05353 [Clostridium bolteae ATCC
           BAA-613]
          Length = 155

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 2/146 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
                  +   + P++EE  F  V +  ++E     L+ ++++ +G + + DCE +S+A+
Sbjct: 4   KESYESRVEKHLLPLMEEHGFELVDVEYVKEAGTWYLRAYIDK-EGGIAVDDCEVISRAL 62

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD E+ I+  Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G + 
Sbjct: 63  SDWLDKEDFIDDSYILEVSSPGLGRPLKKERDFVRSMGKDVDVRLYRQLNKQKEFTGALS 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAI 162
              E    L  E   +    +  IA+
Sbjct: 123 AYDENTVTLTMEDGSQMVFEKADIAL 148


>gi|322418687|ref|YP_004197910.1| hypothetical protein GM18_1160 [Geobacter sp. M18]
 gi|320125074|gb|ADW12634.1| protein of unknown function DUF150 [Geobacter sp. M18]
          Length = 159

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 14/165 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
              + +   ++ +I  +   +    V +    E   +++++F+E+ +G +TL DC ++S+
Sbjct: 1   MAKVDVVERVTEIITEIGAPLGIGLVDLEYKREGRDMVVRVFLEK-EGGITLDDCADVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-----GDKQ 129
            +S ILDVE+ +   Y LEVSSPGI RP+ + +D+ R+ GH+V  +   +        ++
Sbjct: 60  QLSDILDVEDFMPERYTLEVSSPGICRPLKKVADYERFMGHLVKVKTFDTLTDDAGNKRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              GK+ G       ++              +I  D +  A L  
Sbjct: 120 TFTGKLAGIQGGVVSIDL-------TEGQHASIPLDKVAKANLEF 157


>gi|170754643|ref|YP_001781965.1| hypothetical protein CLD_2218 [Clostridium botulinum B1 str. Okra]
 gi|226701221|sp|B1II53|RIMP_CLOBK RecName: Full=Ribosome maturation factor rimP
 gi|169119855|gb|ACA43691.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
          Length = 153

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  ++   I+P+ E + +    I  ++  K   L+I+++  +  ++L  CE++S+
Sbjct: 1   MSKHSLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDS-ENGVSLEGCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+
Sbjct: 60  AVSELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +E    ++ E        E  + I  + +    L
Sbjct: 120 LVDFNENEINIKVE--------ENIVTIPREKISKTTL 149


>gi|299067339|emb|CBJ38536.1| conserved protein of unknown function [Ralstonia solanacearum
           CMR15]
          Length = 149

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 4/139 (2%)

Query: 36  MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
           M +  V++    +   LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVS
Sbjct: 1   MGYELVEVERAPDG--LLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--NYERLEVS 56

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDM 155
           SPG+DRP+    DF R+ G  V   + L    ++   G +   +            E   
Sbjct: 57  SPGLDRPLRTLVDFTRFAGLEVKVTLRLPVNGQKNFTGIVQAPAGEPGQERIGLEFEGKD 116

Query: 156 NELQIAISFDSLLSARLIV 174
               +  +   L  ARL+ 
Sbjct: 117 GPALLEFTLSELDRARLVP 135


>gi|254302279|ref|ZP_04969637.1| hypothetical protein FNP_2331 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322471|gb|EDK87721.1| hypothetical protein FNP_2331 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 156

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ +I P IEEM    V +  +++     ++IF+E  +G++ + DC +LS  I   
Sbjct: 7   IVEKITKIINPFIEEMGLSLVDVEYVQDGGYWYVRIFIENLNGDLNIEDCSKLSSKIED- 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             VE +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I   +
Sbjct: 66  -KVEELIEHKFFLEVSSPGLERPLKKLEDYIRFTGEKITLHLKHKLDDKKQFKAIIKEVN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +K+        +I I F+ +  A ++ 
Sbjct: 125 GDNIIFLIDKK--------EIEIKFNEIRKANILF 151


>gi|253681731|ref|ZP_04862528.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
 gi|253561443|gb|EES90895.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
          Length = 154

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             I+ +++P++E +++    I  + E     L+I+++     + L DCE++S+ +S +LD
Sbjct: 9   DKINELVRPIVEGLNYELYYIEYVREQNENYLRIYIDSS-KGINLEDCEKVSRKVSDMLD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            ++ IE  Y LEVSSPGI+R +       ++  + +  ++       ++  GK++  ++ 
Sbjct: 68  EKDPIEDGYYLEVSSPGIERVLHTDEHLHKYINNQIVIKLAKLFEGSREHQGKLLNFNDE 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLS 169
              ++K+           I+I  D +  
Sbjct: 128 SITIQKDNES--------ISIPRDRIKK 147


>gi|164688522|ref|ZP_02212550.1| hypothetical protein CLOBAR_02167 [Clostridium bartlettii DSM
           16795]
 gi|164602935|gb|EDQ96400.1| hypothetical protein CLOBAR_02167 [Clostridium bartlettii DSM
           16795]
          Length = 153

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQA 75
               +   I  ++QP+++  +   V I  ++E     L+I++E+ +G +TL DC E+S+ 
Sbjct: 1   MKKNIESTIEELVQPIVDARNIEIVDIEYVKEAGQFYLRIYLEK-EGGITLDDCAEVSRE 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           ++PILD ++ I+ +Y LEV SPG+DRP+ ++ DF+R+ G+ V  ++       ++L G  
Sbjct: 60  LNPILDEKDPIKDNYFLEVCSPGLDRPLKKEKDFIRYAGYDVEIKLYKPLNGTKQLEG-- 117

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    L ++K+ +  ++  ++      +   +L V
Sbjct: 118 -----ELIGLTEDKKIKVVIDNNEVEFDKKDIALIKLAV 151


>gi|218887602|ref|YP_002436923.1| hypothetical protein DvMF_2516 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226701448|sp|B8DN15|RIMP_DESVM RecName: Full=Ribosome maturation factor rimP
 gi|218758556|gb|ACL09455.1| protein of unknown function DUF150 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 226

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 73/183 (39%), Gaps = 30/183 (16%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE---------------------- 58
           L   ++++  P+ + +      I +++   ++L+++V+                      
Sbjct: 6   LRDAVAAIATPLADALGIALWGIEIIDGGRMVLRVYVDAKPGMPVPADTAEATESATPEG 65

Query: 59  -----RDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN 113
                     +T+  C  LS+ +   LDVE+++   Y LEVSSPG++RP    +  + + 
Sbjct: 66  VALEGSTPEGVTIDQCARLSRQLGLALDVEDVVRDAYVLEVSSPGLERPFFEIAQVVPYV 125

Query: 114 GHVVACEIVLS---SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           G  +   + +       ++K    I+           +     D +   I++++D +  A
Sbjct: 126 GRTIELTLAVPHPEWPGRRKFRADIVRVEGDTLTFLPDTAPRPDEDPAPISVAWDDVKKA 185

Query: 171 RLI 173
            LI
Sbjct: 186 HLI 188


>gi|331269631|ref|YP_004396123.1| hypothetical protein CbC4_1447 [Clostridium botulinum BKT015925]
 gi|329126181|gb|AEB76126.1| Hypothetical UPF0090 protein [Clostridium botulinum BKT015925]
          Length = 154

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             I+ +++P++E +++    I  + E     L+I+++     + L DC+++S+ +S +LD
Sbjct: 9   DKINELVRPIVEGLNYELYYIEYVREQNENYLRIYIDSS-KGINLEDCQKVSRKVSDMLD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            ++ IE  Y LEVSSPGI+R +       ++  + +  ++       ++  GK++  ++ 
Sbjct: 68  EKDPIEDGYYLEVSSPGIERILHTDEHLHKYINNQIVIKLAKLFEGSREHQGKLLSFNDE 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLS 169
              +EK+           ++I  D +  
Sbjct: 128 SITMEKDNE--------NVSIPRDRIKK 147


>gi|225374839|ref|ZP_03752060.1| hypothetical protein ROSEINA2194_00460 [Roseburia inulinivorans DSM
           16841]
 gi|225213300|gb|EEG95654.1| hypothetical protein ROSEINA2194_00460 [Roseburia inulinivorans DSM
           16841]
          Length = 162

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 76/150 (50%), Gaps = 2/150 (1%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEEL 72
            +            +I P+++  +F  V +  ++E +   L++++++ +G +T  DC ++
Sbjct: 7   HMSKKEMYEARTEELITPILDRRNFELVDVEYVKEGSTWYLRVYIDK-EGGITSDDCADV 65

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ ++ ILD E+ +EG Y  EVSSPG+ RP+ ++ D++R  G  +      +   +++  
Sbjct: 66  SREMNEILDREDYVEGSYTFEVSSPGLGRPLKKEKDYIRSMGKELEIRTYRAIDREKEFY 125

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
           G +         +E+E   E    +  IA+
Sbjct: 126 GILKAYDADTVTIEQEDGKEMVFEKSNIAL 155


>gi|91208368|sp|Q3SKW9|RIMP_THIDA RecName: Full=Ribosome maturation factor rimP
          Length = 142

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 80/144 (55%), Gaps = 13/144 (9%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++PV+  + +  V +        LL+IF+++  G +T+ DC  +S  ++ +  VENI   
Sbjct: 8   LEPVLAGLGYELVMLE--RAGRGLLRIFIDKP-GGVTIDDCVAVSNHLTHLFTVENI--D 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
           + RLEVSSPG+DRP+V+  D+ R+ G  V  ++ +   ++++L G+++G       L  +
Sbjct: 63  YDRLEVSSPGLDRPLVKPQDYARFAGEQVTLKLRVPMDNRRRLSGQLLGLESDAVKLVVD 122

Query: 149 KRGEKDMNELQIAISFDSLLSARL 172
            R        ++++   ++ +ARL
Sbjct: 123 GR--------EMSVDLRNVDAARL 138


>gi|297170975|gb|ADI21990.1| uncharacterized protein conserved in bacteria [uncultured
           myxobacterium HF0200_01L06]
          Length = 170

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER--DDGNMTLRDCEELSQAIS 77
            +  ++ ++I+PV+E+     V  +++  +  +++I ++R  +   + +  C E+S+ + 
Sbjct: 4   DIPEELRTLIEPVLEDHGCELVD-TIVLNRPKVVRIIIDRASEGRGVGIDLCAEISREVG 62

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD    IEG YRLEVSSPG+ R + R+ DF    G  V          +++  G+++ 
Sbjct: 63  TQLDAAEAIEGSYRLEVSSPGLHRVLSREKDFRAACGQNVNVTTKGLIDGRRRFNGQLLE 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +    +E +         +++ I FD +  A L+
Sbjct: 123 FGDGLARVEVDG--------VRVGIPFDQIEKANLV 150


>gi|227499046|ref|ZP_03929183.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904495|gb|EEH90413.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 153

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 8/156 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +S +  P+ E      V +  + E++  L++++++ +G + + DC  +S  
Sbjct: 1   MDKKKIVEQVSELALPICEACGVELVDVEYVRERDWYLRVYIDK-EGGIDIDDCTAVSGD 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  +LD +++I+  Y LEVSSPGIDRP+ + SD++   G  +          K+    ++
Sbjct: 60  LEKVLDEKDVIKEQYYLEVSSPGIDRPLKKDSDYVDHYGKKIDVSFYAPFEGKKVQTYEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +   E    +       K+  + ++ +    + S R
Sbjct: 120 VSHDEAHLVV-------KNFKKQKVTLERSLISSVR 148


>gi|237736657|ref|ZP_04567138.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420519|gb|EEO35566.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
          Length = 160

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
              +   I  ++ PV+ EM    V I  +++     ++I+VE  +G +TL +C  +S  I
Sbjct: 7   QQKIIEKIEKIVTPVVNEMGLSLVDIEYMQDGGYWYVRIYVENLNGEITLEECAAISGKI 66

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
               DV+ +IE  + LEVSSPGI+RP+ +  DF+R+ G  +   +     DK+   G I 
Sbjct: 67  DE--DVDKLIEQRFFLEVSSPGIERPLKKIEDFIRFKGEKIKVSLKHKINDKKSFEGIIT 124

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
              +   FLE E+    ++        F  +  A +I   + +
Sbjct: 125 ECKDNIIFLEIEEENIVEI-------PFSEVKKANIIYEFDEI 160


>gi|291536068|emb|CBL09180.1| Uncharacterized protein conserved in bacteria [Roseburia
           intestinalis M50/1]
 gi|291538563|emb|CBL11674.1| Uncharacterized protein conserved in bacteria [Roseburia
           intestinalis XB6B4]
          Length = 155

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +I P+++ M+F  V +  ++E     L+ ++++ +G +T+ DCE +++ ++ IL
Sbjct: 8   ETRTEELITPILDRMNFELVDVEYVKEGGTWYLRAYIDK-EGGITVNDCEAVAREMNEIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ +E  Y  EVSSPG+ RP+ ++ D++R  G  V      +   +++  G +    E
Sbjct: 67  DREDFVEDSYVFEVSSPGLGRPLKKEKDYIRSMGKEVEIRTYRAINREKEFYGILSAYDE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               ++ E          ++      +   RL   
Sbjct: 127 NTVTIKTED-------GTEMTFEKSDIALIRLAFD 154


>gi|282848826|ref|ZP_06258219.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|294791738|ref|ZP_06756886.1| conserved hypothetical protein [Veillonella sp. 6_1_27]
 gi|294793599|ref|ZP_06758736.1| conserved hypothetical protein [Veillonella sp. 3_1_44]
 gi|282581480|gb|EFB86870.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|294455169|gb|EFG23541.1| conserved hypothetical protein [Veillonella sp. 3_1_44]
 gi|294456968|gb|EFG25330.1| conserved hypothetical protein [Veillonella sp. 6_1_27]
          Length = 152

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ 
Sbjct: 1   MKREAVEEFVSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LD ++ I  +Y LEVSSPG+DR + +  D +R+NG  V  ++       ++  G +
Sbjct: 60  LSAVLDEKDPITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKPVNGSKQFTGAL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G ++T                  I     ++   RL
Sbjct: 120 QGFTDTSIDFTINGES--------ITFERSAIAQIRL 148


>gi|315924375|ref|ZP_07920597.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622254|gb|EFV02213.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 162

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
             M     I  +++P +  + +    +      K  +L ++++R +  ++L DCE++S+ 
Sbjct: 10  RKMARKDAIYELLKPQVTTLGYELYDVDFEKAGKKRILTVYIDRKE-GISLEDCEKVSRE 68

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           IS  LD  + I   Y L+VSSPG++R + R   +    G ++  ++  +   +++L   +
Sbjct: 69  ISAFLDAADPIAETYTLQVSSPGLERKLTRLKHYRAVVGEMIDLKLFEAIDGQKQLCAVL 128

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +    ++       + +   + I F S+  A L
Sbjct: 129 RFVDDEKIVVQ-------EGDAEPLTIPFKSIAKASL 158


>gi|300361903|ref|ZP_07058080.1| protein of hypothetical function DUF150 [Lactobacillus gasseri
           JV-V03]
 gi|300354522|gb|EFJ70393.1| protein of hypothetical function DUF150 [Lactobacillus gasseri
           JV-V03]
          Length = 172

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 16  TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 75

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 76  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE     +      +I I   ++ S+R
Sbjct: 136 KDLNQDQIVLEV----KIKTRRKEITIPRKTIASSR 167


>gi|227529105|ref|ZP_03959154.1| protein of hypothetical function DUF150 [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350949|gb|EEJ41240.1| protein of hypothetical function DUF150 [Lactobacillus vaginalis
           ATCC 49540]
          Length = 165

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 8/160 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +S + +P++ +       +  ++  K+  L+++V++ DG +TL DC ++S  +S
Sbjct: 7   SNVVEIVSGLAKPILAKHDCYLYDLEFVKEGKSWYLRVYVDK-DGGVTLEDCADISDELS 65

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + I   Y LEVSSPG +RP+ +++D+ R     +   +      K+   G +
Sbjct: 66  EALDNTEPDPIPQAYFLEVSSPGAERPLKKEADYERAINDYIHVSLYQQIEGKKAYEGTL 125

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +  +     LE   +      + +I I    +  ARL + 
Sbjct: 126 VELTPDELTLEYMDK----TRQRRIKIERKMIAQARLAID 161


>gi|303240819|ref|ZP_07327332.1| protein of unknown function DUF150 [Acetivibrio cellulolyticus CD2]
 gi|302591707|gb|EFL61442.1| protein of unknown function DUF150 [Acetivibrio cellulolyticus CD2]
          Length = 153

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 71/123 (57%), Gaps = 2/123 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++   +PV+    F  V +  ++E  N  L+I++++  G +T+ DC+ +S+
Sbjct: 1   MVKRKIEEIVAEFAEPVVANHYFELVDVEFIKEGTNWYLRIYIDKP-GGITIDDCQIISE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS ILD ++ IE  Y LEVSSPG+DRP+ ++SDF R+ G +V  ++      ++   G 
Sbjct: 60  EISDILDKKDPIEQSYFLEVSSPGLDRPLKKESDFERFKGELVEVKVFKPIDGRKIFEGN 119

Query: 135 IMG 137
           ++G
Sbjct: 120 LLG 122


>gi|259016311|sp|Q7NFN6|RIMP_GLOVI RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 75/156 (48%), Gaps = 10/156 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   ++++ +PV E++  + V ++     K   L++ +        L DCE++S+A+  
Sbjct: 5   DIVEQVTALAEPVAEQLGLQLVAVAYQTHTKPATLRVDIRHPTEGTGLDDCEKMSRALEA 64

Query: 79  ILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +LD  +++I G Y LEVSSPG++R +    +F+ + G  V  +       K++  G+++ 
Sbjct: 65  LLDTRDDLIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFGPVDGKKQWEGRLLE 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 +L    R        ++A+    +   +L+
Sbjct: 125 RDGENVYLTIAGR--------RVALPRPQVARVQLV 152


>gi|169634555|ref|YP_001708291.1| hypothetical protein ABSDF3182 [Acinetobacter baumannii SDF]
 gi|226703734|sp|B0VLU4|RIMP_ACIBS RecName: Full=Ribosome maturation factor rimP
 gi|169153347|emb|CAP02460.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 174

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--------------- 59
                 +  +  +I P +E        I  L   K  LL+I+++R               
Sbjct: 1   MKLSNKSQALYDMIAPAVEACGVDLWGIEFLPQGKRSLLRIYIDRTVDENAEPVINEDGE 60

Query: 60  --DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + + DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  V
Sbjct: 61  VEQGRGIGVEDCVRVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLEQLQGYIGQQV 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E  G+       + I  +++  A LI  D
Sbjct: 121 ALRLIAAVENRRKFQAKLLAVDLENEEIQVEVEGK-----HVLDIDSNNIDKANLIYQD 174


>gi|257791561|ref|YP_003182167.1| hypothetical protein Elen_1813 [Eggerthella lenta DSM 2243]
 gi|325833208|ref|ZP_08165714.1| hypothetical protein HMPREF9404_3885 [Eggerthella sp. HGA1]
 gi|257475458|gb|ACV55778.1| protein of unknown function DUF150 [Eggerthella lenta DSM 2243]
 gi|325485590|gb|EGC88058.1| hypothetical protein HMPREF9404_3885 [Eggerthella sp. HGA1]
          Length = 159

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 11/157 (7%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
                   +   + P  E+     V + +   K    ++++++  D  ++  +       
Sbjct: 1   MLSKKEQQLLDALAPRAEQEGVEIVTVEVAGAKKAPTIRVYIDTPD-GVSFDELSSAQAW 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I+ ++D  +   G Y LEVSSPGIDRP+     F R+ G     +       +    G I
Sbjct: 60  INDLMDELDPFPGAYTLEVSSPGIDRPLRTAEHFARFVGDTAVLKT-QPVDGRGSWTGAI 118

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                    L+ +          +  I  D++  A L
Sbjct: 119 ASVEGDVVVLDVDG--------AEARIPMDTIKRAHL 147


>gi|148380377|ref|YP_001254918.1| hypothetical protein CBO2421 [Clostridium botulinum A str. ATCC
           3502]
 gi|153933725|ref|YP_001384597.1| hypothetical protein CLB_2286 [Clostridium botulinum A str. ATCC
           19397]
 gi|153935745|ref|YP_001388113.1| hypothetical protein CLC_2269 [Clostridium botulinum A str. Hall]
 gi|166987426|sp|A7FVZ7|RIMP_CLOB1 RecName: Full=Ribosome maturation factor rimP
 gi|166987470|sp|A5I4J7|RIMP_CLOBH RecName: Full=Ribosome maturation factor rimP
 gi|148289861|emb|CAL83969.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929769|gb|ABS35269.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152931659|gb|ABS37158.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
          Length = 153

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  ++   I+P+ E + +    I  ++  K   L+I+++  +  ++L  CE++S+
Sbjct: 1   MSKHSLIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDS-ENGVSLEGCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS +LD  + I+  Y LEVSSPGIDR +       ++  + +   +      K+K  G+
Sbjct: 60  AISELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKSYNIVLNLYSPIDKKKKYEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +E    ++ E        E  + I  + +    L
Sbjct: 120 LVDFNENEIDIKVE--------ENIVTIPREKISKTTL 149


>gi|170759112|ref|YP_001787733.1| hypothetical protein CLK_1798 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|226695970|sp|B1KWL1|RIMP_CLOBM RecName: Full=Ribosome maturation factor rimP
 gi|169406101|gb|ACA54512.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 153

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  ++   I+P++E +++    I  ++  K   L+I+++  +   +L  CE++S+
Sbjct: 1   MSKHNLIENLKKQIEPIVEGLNYELYHIEFVKEGKENYLRIYIDS-ENGASLEGCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+
Sbjct: 60  AVSELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIILNLYSPIDKKKKYEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +E    ++ E        E  + I  + +    L
Sbjct: 120 LIDFNENEINIKVE--------ENIVTIPREKISKTTL 149


>gi|288871536|ref|ZP_06117961.2| protein associated with NUS operon [Clostridium hathewayi DSM
           13479]
 gi|288863081|gb|EFC95379.1| protein associated with NUS operon [Clostridium hathewayi DSM
           13479]
          Length = 162

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                  + P++EE  F  V +  ++E  N  L+ ++++ +G +T+ DCE +S+ +   L
Sbjct: 15  EKKTEDYLLPLMEEYHFELVDVEYVKEAGNWYLRAYIDK-EGGITVDDCEVVSRRLGDWL 73

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ IE  Y LEVSSPG+ RP+ +  DF R  G  V  ++      ++   G +    +
Sbjct: 74  DEKDFIEDSYILEVSSPGLGRPLKKDKDFDRSIGKDVDIKLYKPMNKQKDYTGTLKAYDK 133

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   E  +N  +IA+
Sbjct: 134 DTVTVTVEDGTELVLNRPEIAL 155


>gi|255655318|ref|ZP_05400727.1| hypothetical protein CdifQCD-2_06375 [Clostridium difficile
           QCD-23m63]
 gi|296451303|ref|ZP_06893043.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP08]
 gi|296880345|ref|ZP_06904308.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP07]
 gi|296259909|gb|EFH06764.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP08]
 gi|296428586|gb|EFH14470.1| protein of hypothetical function DUF150 [Clostridium difficile
           NAP07]
          Length = 153

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 9/158 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               L   I  ++  + +E  F  V +  ++E     L++++++++  ++L +CE +S+ 
Sbjct: 1   MKKNLEATIEEIVTKITDEHGFEMVDVEYVKEAGEYYLRVYIDKEE-GISLNECELVSRE 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +SPILD ++ I+ +Y LEVSSPG+DR + +  DF+R+ G  V  ++       ++  G  
Sbjct: 60  LSPILDEKDPIKENYFLEVSSPGLDRALKKDRDFVRYQGRDVDLKLYKPLNGCKQFEG-- 117

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    L ++   +  +N  +I  +   +   RL 
Sbjct: 118 -----ELVGLTEDNNIKIIVNGKEIEFNRKDVAIVRLA 150


>gi|116495059|ref|YP_806793.1| hypothetical protein LSEI_1577 [Lactobacillus casei ATCC 334]
 gi|191638562|ref|YP_001987728.1| hypothetical protein LCABL_17900 [Lactobacillus casei BL23]
 gi|239631346|ref|ZP_04674377.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066622|ref|YP_003788645.1| hypothetical protein LCAZH_1564 [Lactobacillus casei str. Zhang]
 gi|122263524|sp|Q038M1|RIMP_LACC3 RecName: Full=Ribosome maturation factor rimP
 gi|259585801|sp|B3WER9|RIMP_LACCB RecName: Full=Ribosome maturation factor rimP
 gi|116105209|gb|ABJ70351.1| hypothetical protein LSEI_1577 [Lactobacillus casei ATCC 334]
 gi|190712864|emb|CAQ66870.1| Putative uncharacterized protein [Lactobacillus casei BL23]
 gi|239525811|gb|EEQ64812.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300439029|gb|ADK18795.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
 gi|327382600|gb|AEA54076.1| Ribosome maturation factor rimP [Lactobacillus casei LC2W]
 gi|327385798|gb|AEA57272.1| Ribosome maturation factor rimP [Lactobacillus casei BD-II]
          Length = 159

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++++++P++++  F    +  ++      L++++++  G +TL +C  +S+
Sbjct: 1   MSTQSVVETVTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDK-TGGITLDECVMVSE 59

Query: 75  AISPIL--DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           A+S  L     + I   Y LEVSSPG +RP+  ++D+ +  G  +   +      K+   
Sbjct: 60  ALSEKLDAMDPDPIPQQYFLEVSSPGAERPLKHETDYEQAVGDYIHVSLFKKLDGKKVFE 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G +         L  + +  K        I    + SARL 
Sbjct: 120 GTLKELLPDQLTLTVKDKSRKFDQ----VIDRQLIASARLA 156


>gi|322806688|emb|CBZ04257.1| clustered with transcription termination protein NusA [Clostridium
           botulinum H04402 065]
          Length = 153

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  ++   I+P+ E + +    I  ++  K   L+I+++  +  ++L  CE++S+
Sbjct: 1   MSKHSLIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDS-ENGVSLEGCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+
Sbjct: 60  AVSELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSPIDKKKKYEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +E    ++ E        E  + I  + +    L
Sbjct: 120 LVDFNENEIDIKVE--------ENIVTIPREKISKTTL 149


>gi|169334800|ref|ZP_02861993.1| hypothetical protein ANASTE_01206 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257538|gb|EDS71504.1| hypothetical protein ANASTE_01206 [Anaerofustis stercorihominis DSM
           17244]
          Length = 172

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + ++ + ++++     + I   +   N +L++++ER +G ++L +   +++ +S 
Sbjct: 21  KVIDRVEALSEDILKDNGCELIDIEFKKEGNNKVLRLYIERIEGKVSLDEISTVNRLLSD 80

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD E+ IE  Y LEVSSPG++R + ++ DF+++ G  V  ++      K++  G + G 
Sbjct: 81  LLDEEDFIEEEYILEVSSPGVNRVIKKEKDFIKFKGSKVDVKLYKPLNGKKQFTGILEGY 140

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                 ++ +           + I    +    L   
Sbjct: 141 ENENVLIDLDGEH--------LVIPHKDISKVNLSFD 169


>gi|168184628|ref|ZP_02619292.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|237795858|ref|YP_002863410.1| hypothetical protein CLJ_B2647 [Clostridium botulinum Ba4 str. 657]
 gi|259585740|sp|C3L0C0|RIMP_CLOB6 RecName: Full=Ribosome maturation factor rimP
 gi|182672272|gb|EDT84233.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|229262492|gb|ACQ53525.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
          Length = 153

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  ++   I+P++E +++    I  ++  K   L+I+++  +  ++L  CE++S+
Sbjct: 1   MSKHSLIENLKKQIEPIVEGLNYELYHIEFVKEGKENYLRIYIDS-ENGVSLEGCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +  S   K+K  G+
Sbjct: 60  AVSELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSSIDKKKKYEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +E    ++ E        E  + I  + +    L
Sbjct: 120 LVDFNENEINIKVE--------ENIVTIPREKISKTTL 149


>gi|323485569|ref|ZP_08090914.1| hypothetical protein HMPREF9474_02665 [Clostridium symbiosum
           WAL-14163]
 gi|323692917|ref|ZP_08107140.1| ribosome maturation factor rimP [Clostridium symbiosum WAL-14673]
 gi|323401108|gb|EGA93461.1| hypothetical protein HMPREF9474_02665 [Clostridium symbiosum
           WAL-14163]
 gi|323503024|gb|EGB18863.1| ribosome maturation factor rimP [Clostridium symbiosum WAL-14673]
          Length = 155

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + + + PV+EE  F  V +  + E     L+ ++++ +G + + DCE +S+ +   L
Sbjct: 8   EAKVEAWLLPVLEEHHFELVDVEYVREVGVWYLRAYIDK-EGGIAVDDCEIISRKLGEWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G +     
Sbjct: 67  DKEDFIDDSYILEVSSPGLGRPLKKEKDFVRSMGKDVEVRLYKPLNKQKEYTGALKSYDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               +  E           +  +   +   RL   
Sbjct: 127 DTVTITLED-------GNDLIFAKADIALIRLAFD 154


>gi|124267112|ref|YP_001021116.1| hypothetical protein Mpe_A1923 [Methylibium petroleiphilum PM1]
 gi|226732163|sp|A2SH42|RIMP_METPP RecName: Full=Ribosome maturation factor rimP
 gi|124259887|gb|ABM94881.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 177

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 18/158 (11%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---------DDGNMTLRDCEELSQAI 76
            + ++  +    +  V+         LL++F++R             +T+ DCE++++ +
Sbjct: 4   QAAVEKTVTGFGYELVECE--RGSQGLLRVFIDRVPGQVYDGGPGEFVTVEDCEKVTRQL 61

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             +L+VEN    + RLEVSSPG+DRP+ + +D+ R+ G  +   + L    ++K  G + 
Sbjct: 62  QYVLEVEN--CDYSRLEVSSPGLDRPLKKSADYARFAGERIDITLKLPFQGRKKYQGVLA 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            + E       E        +  +  + + +  ARL+ 
Sbjct: 120 ASGE-----AWELHFNDGKQDQVLGFTLEEVRDARLVP 152


>gi|313893703|ref|ZP_07827270.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441717|gb|EFR60142.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 152

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ 
Sbjct: 1   MKREAVEEFVSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LD ++ I  +Y LEVSSPG+DR + +  D +R+NG  V  ++       ++  G +
Sbjct: 60  LSAVLDEKDPITENYLLEVSSPGLDRVLKKDKDLIRYNGRDVDIQLFKPVNGSKQFTGAL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G ++T                  +     ++   RL
Sbjct: 120 QGFTDTTIDFTINGES--------MTFERSAIAQIRL 148


>gi|226949775|ref|YP_002804866.1| hypothetical protein CLM_2715 [Clostridium botulinum A2 str. Kyoto]
 gi|254801446|sp|C1FS63|RIMP_CLOBJ RecName: Full=Ribosome maturation factor rimP
 gi|226844311|gb|ACO86977.1| conserved hypothetical protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 153

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  ++   I+P+ E + +    I  ++  K   L+I+++  +  ++L  CE++S+
Sbjct: 1   MSKHSLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDS-ENGVSLEGCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS +LD  + I+  Y LEVSSPGIDR +       ++  + +   +      K+K  G+
Sbjct: 60  AISELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKSYNIVLNLYSPIDKKKKYEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +E    ++ E        E  + I  + +    L
Sbjct: 120 LVDFNENEIDIKVE--------ENIVTIPREKISKTTL 149


>gi|332976701|gb|EGK13539.1| hypothetical protein HMPREF9373_1208 [Psychrobacter sp. 1501(2011)]
          Length = 166

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 18/164 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER------DDGNMTLRDCEELSQAI 76
            ++ +I P +         +  L      LL+I++E        D  +T+ +C  ++  +
Sbjct: 9   QLTDIIAPAVAACDVALWGVEFLPQGGRSLLRIYIESLPEDKAADKQVTIENCAAVTHQV 68

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG----DKQKLI 132
           S +L+V + I G Y LEVSSPG+DRP         + G  +   ++ + G     ++K+ 
Sbjct: 69  SGVLEVHDPIAGEYVLEVSSPGLDRPFFAPEQMTDYVGQTLNLRLIQAVGAGSSKRRKVT 128

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           GK+    +    +             Q  I+ D++  A LI  D
Sbjct: 129 GKLEQLGDKQLSI-------VTPEGEQFDIALDNIDKANLIYQD 165


>gi|283850805|ref|ZP_06368091.1| protein of unknown function DUF150 [Desulfovibrio sp. FW1012B]
 gi|283573728|gb|EFC21702.1| protein of unknown function DUF150 [Desulfovibrio sp. FW1012B]
          Length = 181

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVE--------RDDGNMTLRDCEE 71
           +   I  +I P +  M      + L    +  L +++++         +   +T+ +C  
Sbjct: 7   VPDKIRELISPFLASMGLVVWGVELAASGHRQLVRLYLDLAADTPRTPERRGVTIDECAR 66

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            S+ ++ +L++E++    Y LEVSSPG+ R     +    + G V+  ++ +    +++ 
Sbjct: 67  ASRHLATLLEMEDLFHDPYVLEVSSPGLGRRFFEPAQLPAYVGQVIEAKLTVPRDGRKRF 126

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
            G +         +  +   E       ++  F+     RLI   + +  
Sbjct: 127 KGVLTAVEGERVTILVDAAPEAF----PLSFDFEEAEKVRLIHAFDAISE 172


>gi|237742965|ref|ZP_04573446.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
 gi|229430613|gb|EEO40825.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
          Length = 156

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I   
Sbjct: 7   IVEKITKIVNPFIEEMNLSLVDVEYVQDGGYWYIRIFIENLNGDLNIEDCSKLSSKIED- 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             VE +IE  + LEVSSPG++RP+ +  D++R+ G  +   +      K++    I   +
Sbjct: 66  -KVEGLIEHKFFLEVSSPGLERPLKKIEDYVRFKGEKITLHLKHKLNYKKQFKAVIKEVN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +K+        +I I F+ +  A ++ 
Sbjct: 125 GDNIIFLIDKK--------EIEIKFNEIRKANILF 151


>gi|313673262|ref|YP_004051373.1| hypothetical protein Calni_1302 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940018|gb|ADR19210.1| protein of unknown function DUF150 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 157

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 12/156 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +    + +  +       +  + E     L+IF+++++  +TL DC   S+ IS  
Sbjct: 8   IVERVKEYSEKIAPKFGVEIFDVKFVREPSGYTLRIFLDKEN--LTLEDCANFSKEISKW 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI-VLSSGDKQKLIGKIMGT 138
           LD E++I   Y LEVSSPG++RP+    D+ ++ G     E+    S  ++   G I G 
Sbjct: 66  LDKEDLIPHKYNLEVSSPGLNRPLRNIDDYKKYIGRKCKVELFKKDSSGRKNYTGYIKGV 125

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                 ++ +K         +I++S+  +    L  
Sbjct: 126 DGEVILIDLKKE--------EISLSYSDIKKGNLEF 153


>gi|309389229|gb|ADO77109.1| protein of unknown function DUF150 [Halanaerobium praevalens DSM
           2228]
          Length = 155

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 82/154 (53%), Gaps = 9/154 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +A  ++  + P+ +  +   + +  L+   + +L+IF+E  +G +T+ +CE++S+++S 
Sbjct: 6   KVAETVTDFVLPIAQSENLNLIDVEFLKEGSDWILRIFLENKNGELTIEECEKVSRSLSM 65

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD E+ I+  Y LEVSSPG++RP+  + DF R+ G ++A +       +++ +G +   
Sbjct: 66  ILDEEDPIDKSYILEVSSPGLERPLKTEEDFERFKGELIAVKTFKKIEGQKEFVGILKDF 125

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +     LE +           + I +  +  A L
Sbjct: 126 NVDKITLEIDNNK--------LEIDYSLVARANL 151


>gi|289449993|ref|YP_003474584.1| hypothetical protein HMPREF0868_0246 [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184540|gb|ADC90965.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 155

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 2/145 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                +A    S+   +I +M +  V +  ++E     L+ ++++  G + L DC E+S+
Sbjct: 1   MAKSKIAAQAESLCAKLINDMGYDLVDVEFVKEGPDRFLRFYIDKR-GGVGLDDCTEVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +I P++D    I+  Y LEVSSPG+DRP+   SD LR  G  V   +  +    +K +G+
Sbjct: 60  SIDPLIDENLTIDQAYYLEVSSPGLDRPLKTDSDLLRHQGEKVEVTLYQARDGHKKFVGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQ 159
           I+   +    L  E  G       +
Sbjct: 120 IVAVDDGVLKLAVENMGVLSFTAAE 144


>gi|126698904|ref|YP_001087801.1| hypothetical protein CD1306 [Clostridium difficile 630]
 gi|254974852|ref|ZP_05271324.1| hypothetical protein CdifQC_06040 [Clostridium difficile QCD-66c26]
 gi|255092239|ref|ZP_05321717.1| hypothetical protein CdifC_06222 [Clostridium difficile CIP 107932]
 gi|255100325|ref|ZP_05329302.1| hypothetical protein CdifQCD-6_05917 [Clostridium difficile
           QCD-63q42]
 gi|255306263|ref|ZP_05350435.1| hypothetical protein CdifA_06705 [Clostridium difficile ATCC 43255]
 gi|255313979|ref|ZP_05355562.1| hypothetical protein CdifQCD-7_06500 [Clostridium difficile
           QCD-76w55]
 gi|255516659|ref|ZP_05384335.1| hypothetical protein CdifQCD-_06064 [Clostridium difficile
           QCD-97b34]
 gi|255649758|ref|ZP_05396660.1| hypothetical protein CdifQCD_06184 [Clostridium difficile
           QCD-37x79]
 gi|260682914|ref|YP_003214199.1| hypothetical protein CD196_1169 [Clostridium difficile CD196]
 gi|260686512|ref|YP_003217645.1| hypothetical protein CDR20291_1147 [Clostridium difficile R20291]
 gi|306519863|ref|ZP_07406210.1| hypothetical protein CdifQ_07217 [Clostridium difficile QCD-32g58]
 gi|123363595|sp|Q18BH3|RIMP_CLOD6 RecName: Full=Ribosome maturation factor rimP
 gi|115250341|emb|CAJ68163.1| conserved hypothetical protein [Clostridium difficile]
 gi|260209077|emb|CBA62221.1| conserved hypothetical protein [Clostridium difficile CD196]
 gi|260212528|emb|CBE03478.1| conserved hypothetical protein [Clostridium difficile R20291]
          Length = 153

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 9/158 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               L   I  ++  + +E  F  V +  ++E     L++++++++  ++L +CE +S+ 
Sbjct: 1   MKKNLEATIEEIVTKITDEHGFEMVDVEYVKEAGEYYLRVYIDKEE-GISLNECELVSRE 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +SPILD ++ I+ +Y LEVSSPG+DR + +  DF+R+ G  V  ++       ++  G  
Sbjct: 60  LSPILDEKDPIKENYFLEVSSPGLDRALKKDRDFVRYQGRDVDLKLYKPLNGCKQFEG-- 117

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                    L ++   +   N  ++  +   +   RL 
Sbjct: 118 -----ELVGLTEDNNIKIIANGKEMEFNRKDVAIVRLA 150


>gi|16124301|ref|NP_418865.1| hypothetical protein CC_0045 [Caulobacter crescentus CB15]
 gi|13421139|gb|AAK22033.1| conserved hypothetical protein [Caulobacter crescentus CB15]
          Length = 160

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 11/144 (7%)

Query: 51  LLLQIFVERD------DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMV 104
             LQI  E         G+M + DC +LS+A+S +LD  + I G Y LEVSSPGIDRP+ 
Sbjct: 7   RRLQIMAEHPLLEDGSGGDMNVEDCAKLSRAVSEVLDAADPIAGEYTLEVSSPGIDRPLT 66

Query: 105 RKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISF 164
           R  DF  + G     E+   +  +++  G++ G  +    L  E       +++ +   F
Sbjct: 67  RLKDFDDYAGLEARIELDRVAEGRKRFKGELAGVEDDQVGLNIEGE-----DDVTVYFPF 121

Query: 165 DSLLSARLIVTDELLRASLNNYGS 188
             ++ A+L++TD L+        +
Sbjct: 122 AWVIDAKLVMTDALMERGAKQRAA 145


>gi|260589531|ref|ZP_05855444.1| putative cytoplasmic protein [Blautia hansenii DSM 20583]
 gi|260540099|gb|EEX20668.1| putative cytoplasmic protein [Blautia hansenii DSM 20583]
          Length = 154

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
                ++++P++ E  F  V +  ++E +   L+ ++++ +  +T+ DCE +S+  S  L
Sbjct: 8   EQKAEALLEPIVAEHDFELVDVEYVKEGSNFYLRAYIDKPE-GITVDDCEVVSRTFSQKL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y +EVSSPG+ RP+ ++ D+ R  G  +      +   +++  G +   +E
Sbjct: 67  DEEDFIDEAYIMEVSSPGLGRPLKKEKDYKRSMGKELEIRTYRAINKEKEFYGILKEYNE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               ++ E          ++      +   RL   
Sbjct: 127 RSVTIDCEG--------TEMTFQKSDIALIRLAFD 153


>gi|331082959|ref|ZP_08332079.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330399954|gb|EGG79612.1| ribosome maturation factor rimP [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 154

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 75/155 (48%), Gaps = 10/155 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 +++P++ E +F  V +  ++E +   L+ ++++ +  +T+ DCE +S+A S  L
Sbjct: 8   EQKAEVLLEPIVAEHNFELVDVEYVKEGSNFYLRAYIDKPE-GITVDDCEIVSRAFSQKL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y +EVSSPG+ RP+ ++ D+ R  G  +      +   +++  G +   +E
Sbjct: 67  DEEDFIDEAYIMEVSSPGLGRPLKKEKDYKRSMGKELEIRTYRAINKEKEFYGILKEYNE 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +   ++ E          ++      +   RL   
Sbjct: 127 SSVTIDCEG--------TEMTFQKSDIALIRLAFD 153


>gi|291562552|emb|CBL41368.1| Uncharacterized protein conserved in bacteria [butyrate-producing
           bacterium SS3/4]
          Length = 155

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +   + P++EE +F  V +  ++E     L+ ++++ +G  T+ DCE +S+ +S  L
Sbjct: 8   ESRVEKFLIPIMEENNFELVDVEYVKEAGTWYLRAYIDK-EGGFTVDDCEMVSRRLSDWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I+  Y LEVSSPG+ RP+ ++ DF R  G  V  ++  +   ++   G +     
Sbjct: 67  DKEDFIDDSYILEVSSPGLGRPLKKEKDFKRSLGEAVDIKLYRAIERQKDFSGILTAYDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               +  E   E          +   +   RL   
Sbjct: 127 DTVTIRYEDGSEN-------TFNRKDIALIRLAFD 154


>gi|254519188|ref|ZP_05131244.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226912937|gb|EEH98138.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 152

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                L   I  +++P+ EE+++    I  ++E     L+I++++ DG + L DCE LS+
Sbjct: 1   MKVDALLETIDQLVRPIAEELNYEIYHIEYVKENGEYYLRIYIDK-DGGIALSDCEALSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ++D ++ I+  Y LEVSSPG++R +     F +  G  +      S   ++ + G 
Sbjct: 60  RVSDVMDEKDPIKEAYFLEVSSPGLNRTLFTDDHFKKQIGKEIMVRFTKSLNGRKNIKGI 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +   S+    +E +           I I  D + SA L
Sbjct: 120 LKEVSDDSVIVETDD---------LITIPKDKIKSANL 148


>gi|116629467|ref|YP_814639.1| hypothetical protein LGAS_0810 [Lactobacillus gasseri ATCC 33323]
 gi|116095049|gb|ABJ60201.1| hypothetical protein LGAS_0810 [Lactobacillus gasseri ATCC 33323]
          Length = 172

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 16  TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 75

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 76  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE     +      +I I    + S+R
Sbjct: 136 KDLNQNQIVLEV----KIKTRRKEITIPRKVIASSR 167


>gi|71908072|ref|YP_285659.1| hypothetical protein Daro_2454 [Dechloromonas aromatica RCB]
 gi|91208406|sp|Q47D92|RIMP_DECAR RecName: Full=Ribosome maturation factor rimP
 gi|71847693|gb|AAZ47189.1| Protein of unknown function DUF150 [Dechloromonas aromatica RCB]
          Length = 146

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 80/156 (51%), Gaps = 13/156 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD--DGNMTLRDCEELSQAISPILD 81
           D++++++  +  + +  V + +   +   +++F++    +  + + DC ++S  ++ + +
Sbjct: 2   DLNTLLETTVVGLGYELVDVEMSP-RGRTIRVFIDAPAKETGIDVEDCAKVSNQLTRVFE 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VEN      RLE+SSPG+DR + + +DF R++G  +  ++ +  G ++   G+++G  + 
Sbjct: 61  VENF--DFDRLEISSPGLDRVVKKAADFERFSGQEIQIKVRIPQGGRRNFQGELLGLKDG 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
              L   K          + + F ++  ARL+   +
Sbjct: 119 KVGLRLAKDD--------VELEFTNIEKARLVPRFD 146


>gi|167766536|ref|ZP_02438589.1| hypothetical protein CLOSS21_01042 [Clostridium sp. SS2/1]
 gi|167711659|gb|EDS22238.1| hypothetical protein CLOSS21_01042 [Clostridium sp. SS2/1]
          Length = 154

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +      ++ P+IE  +F  V +  ++   N  L+++ ++ +G + + DC  +S+++  
Sbjct: 6   DIETKTEELVLPIIEANNFELVDVEYVKEGANWYLRVYADK-EGGIAIDDCVLISRSLEE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E+ IE  Y LEVSSPG+ RP+ ++ D++R  G  +  ++  +   +++  G +   
Sbjct: 65  KLDAEDFIEDAYILEVSSPGLGRPLKKEKDYVRSVGKSIDIKLYKAIDKQKEFTGILKEN 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            E    L  E +         I     S+ SARL + 
Sbjct: 125 MEDQIVLTIEDQD--------ITFEKKSIASARLSLD 153


>gi|226951827|ref|ZP_03822291.1| YhbC family protein [Acinetobacter sp. ATCC 27244]
 gi|226837367|gb|EEH69750.1| YhbC family protein [Acinetobacter sp. ATCC 27244]
          Length = 174

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--------------- 59
                 +  +  +I P +         I  L   K  LL+I++++               
Sbjct: 1   MKLSNKSQALFDLIAPAVAACDVDLWGIEFLPQGKRSLLRIYIDKAIDENAEPVLNEDGE 60

Query: 60  --DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             +   + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  + S    + G  V
Sbjct: 61  VEEGRGIGVQDCVLVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLSQMSGYIGQQV 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E  G        + I   ++  A LI  D
Sbjct: 121 ALRLIAAVENRRKFQAKLLSVDLENEMIQVEVEG-----GQVLEIDSHNIDKANLIYQD 174


>gi|206889666|ref|YP_002248540.1| YlxS [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|259645127|sp|B5YJX5|RIMP_THEYD RecName: Full=Ribosome maturation factor rimP
 gi|206741604|gb|ACI20661.1| YlxS [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 164

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 6/161 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   I+     V E+     V +      K L L+IF+++ +G +T++DCE  S+AI 
Sbjct: 4   KELKDKITDYANIVGEQEGVEIVNVEIYPGGKGLTLRIFIDK-EGGVTIKDCENFSRAIE 62

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            ILDVE+ I+  Y LEVSSPGIDRP+  K DFLR  G  V         D    IGKI+ 
Sbjct: 63  AILDVEDPIKSSYTLEVSSPGIDRPLKNKKDFLRNIGRDVKITTKEKIADNTFFIGKIVD 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIA----ISFDSLLSARLIV 174
             +    +E ++   K   +        I F+ ++ A++ +
Sbjct: 123 VGDDWVRIEIQETKIKGSKKKGKTELLFIPFNKIIKAQVYL 163


>gi|78222793|ref|YP_384540.1| hypothetical protein Gmet_1583 [Geobacter metallireducens GS-15]
 gi|91208011|sp|Q39VA9|RIMP_GEOMG RecName: Full=Ribosome maturation factor rimP
 gi|78194048|gb|ABB31815.1| protein of unknown function DUF150 [Geobacter metallireducens
           GS-15]
          Length = 159

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 14/165 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++++ + ++       V I      ++++L++FV++  G +TL DC  +S+
Sbjct: 1   MAKDEVVDRVTALAESLLSSQEMELVDIEYKREGRHMVLRLFVDKA-GGITLDDCALVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-----KQ 129
             S ILDVE+ I  +Y LEVSSPG++RP+ R+SD+ R+ G +V         D     ++
Sbjct: 60  EFSEILDVEDFISENYTLEVSSPGLNRPLKRESDYERYRGRLVKVRTYDVVEDEAGNRRK 119

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +G + G +     L       K        I    +  A L  
Sbjct: 120 TFLGDLEGLAGGVVTL-------KLREGQMARIPLAKIAKANLEF 157


>gi|150390439|ref|YP_001320488.1| hypothetical protein Amet_2677 [Alkaliphilus metalliredigens QYMF]
 gi|259585692|sp|A6TRL1|RIMP_ALKMQ RecName: Full=Ribosome maturation factor rimP
 gi|149950301|gb|ABR48829.1| protein of unknown function DUF150 [Alkaliphilus metalliredigens
           QYMF]
          Length = 152

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 83/144 (57%), Gaps = 2/144 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +      +I P++E   F  V I   +E  +  L++++++  G +TL DC+++S+ +S 
Sbjct: 3   KIESITEDLITPIVEAEQFELVDIEFKKEGPHKYLRVYIDKP-GGITLDDCQKVSEGLSK 61

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + I  +Y LEVSSPG+DRP+ R+ DFL++ G ++  ++  +   ++ + G+++G 
Sbjct: 62  KLDEADPIVENYFLEVSSPGLDRPLKREVDFLKFKGEMIELKLYEAIDGQKTIEGELVGL 121

Query: 139 SETGFFLEKEKRGEKDMNELQIAI 162
            +    ++  +  E +M   ++AI
Sbjct: 122 IDDKIVIKISETEEVEMPREKVAI 145


>gi|297180948|gb|ADI17151.1| uncharacterized protein conserved in bacteria [uncultured gamma
           proteobacterium HF0070_08D07]
          Length = 152

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 11/155 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE--KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
             +I S++ P IE +  R   + L      NL + ++++ +D  +++ DC  +S+ +S I
Sbjct: 5   KENIESLVAPTIEALGCRIWGVELQGGLKNNLKVVVYIDSED-GISVDDCATVSEHVSDI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+E ++   Y LEVSSPG+DR + ++  F    G  +   +      ++KL G ++   
Sbjct: 64  LDMEELVPSPYVLEVSSPGLDRILFKEQHFKESLGLKIDVRLNRPFEGRKKLTGVLLDYG 123

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    L  +             I  D++   RL+ 
Sbjct: 124 DLELILRDKMGVRN--------IPVDAIRKVRLVP 150


>gi|293374144|ref|ZP_06620478.1| SP14.3 protein [Turicibacter sanguinis PC909]
 gi|325837436|ref|ZP_08166418.1| hypothetical protein HMPREF9402_1291 [Turicibacter sp. HGF1]
 gi|292647247|gb|EFF65223.1| SP14.3 protein [Turicibacter sanguinis PC909]
 gi|325490968|gb|EGC93266.1| hypothetical protein HMPREF9402_1291 [Turicibacter sp. HGF1]
          Length = 155

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 68/156 (43%), Gaps = 6/156 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +      +++P+ E  +   V +  ++E     L+++V+  +  + +  C ++++A+S
Sbjct: 2   SNIVAKTEELVKPICEANNVELVDVEYVKEGQNFFLRVYVDTPE-GIDIDQCADVAEALS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  + IE  Y LEVSSPG +RP+  K       G  +  +   +   +++  G ++ 
Sbjct: 61  EKLDQHDYIEDEYMLEVSSPGAERPLKTKEAVAESIGAYINVKTYKAIDGQKEFEGHLIK 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             E    LE          +  + I +D     RL 
Sbjct: 121 FEEDILTLEV----LVKTRKKVVEIPYDKAAKVRLA 152


>gi|313115475|ref|ZP_07800940.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622185|gb|EFQ05675.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 161

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 11/160 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  + ++++P +E M  R   +   +E     L++ +++ DG M    C ++S A+ PIL
Sbjct: 10  AQRVEALVRPTVEGMGLRLWDVVFEKEGPDWYLRVLIDK-DGTMDTDTCADVSHALDPIL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLIGKIMGTS 139
           D  + I+  Y LEV SPG+ R + R   +    G  +  +++  +    ++  G + G  
Sbjct: 69  DEADPIDQSYYLEVGSPGLGRKLTRPEHYEALKGQKIRVKLIRPNADGVREFSGILTGRE 128

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
            +   +  +           +    ++  S  L   ++L 
Sbjct: 129 GSTVTVNTDAGA--------VTFEVNAASSVNLCDDEDLF 160


>gi|310828068|ref|YP_003960425.1| hypothetical protein ELI_2480 [Eubacterium limosum KIST612]
 gi|308739802|gb|ADO37462.1| Uncharacterized protein conserved in bacteria [Eubacterium limosum
           KIST612]
          Length = 154

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 2/147 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                    +  +I PV+E   +  V ++     K+ +L  +++  +  + L DCE +S+
Sbjct: 1   MKKQSKESMLEELIAPVVEAEGYECVDVTFEKAGKDWVLTTYIDGPN-GIGLDDCEVVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ++D ++ IE  Y LEVSSPGIDRP+ ++ DF R     +           ++L G 
Sbjct: 60  KLSDLMDEKDPIEQSYLLEVSSPGIDRPLKKEKDFARNMDKRIVVSFYAPVNGSKQLSGI 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIA 161
           + G       L+ +     ++    ++
Sbjct: 120 LKGYKGVTLTLQLDSEEMMELEMSAVS 146


>gi|294649081|ref|ZP_06726524.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292825027|gb|EFF83787.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 174

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--------------- 59
                 +  +  +I P +         I  L   K  LL+I++++               
Sbjct: 1   MKLSNKSQALFDLIAPAVAACDVDLWGIEFLPQGKRSLLRIYIDKAIDENAEPVLNEDGE 60

Query: 60  --DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
             +   + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  + S    + G  V
Sbjct: 61  VEEGRGIGVQDCVLVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLSQMSGYIGQQV 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E  G        + I   ++  A LI  D
Sbjct: 121 ALRLIAAVENRRKFQAKLLSVDLENEMIQVEVEGA-----QVLEIDSHNIDKANLIYQD 174


>gi|154485018|ref|ZP_02027466.1| hypothetical protein EUBVEN_02736 [Eubacterium ventriosum ATCC
           27560]
 gi|149733971|gb|EDM50090.1| hypothetical protein EUBVEN_02736 [Eubacterium ventriosum ATCC
           27560]
          Length = 147

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 79/146 (54%), Gaps = 2/146 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
              ++I P+++E  F  V +  ++   N  L+ +V++ +G +T+ D E +S+ +S  LD 
Sbjct: 2   KTEALITPIVDEKGFELVDVEYVKEGSNWYLRAYVDK-EGGITINDLESVSRILSDKLDE 60

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I   Y LEVSSPG+ RP+ +  DF R  G+ +   +  +   +++L+G +   +   
Sbjct: 61  EDFISDAYILEVSSPGLGRPLKKDKDFDRNMGNEIEVHLYRAVDRQKQLVGLLKAYNADT 120

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLL 168
             +E E   E D++ + +++   ++ 
Sbjct: 121 ITIENEDGSETDIDRVNVSLVRPTID 146


>gi|293610133|ref|ZP_06692434.1| hypothetical protein HMPREF0013_02285 [Acinetobacter sp. SH024]
 gi|292827365|gb|EFF85729.1| hypothetical protein HMPREF0013_02285 [Acinetobacter sp. SH024]
 gi|325124306|gb|ADY83829.1| hypothetical protein BDGL_003243 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 174

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 27/181 (14%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-------------- 60
                 +  +  +I P +E        I  L   K  LL+I++++               
Sbjct: 1   MKLSNKSQALHDLIVPAVEACGVDLWGIEFLPQGKRSLLRIYIDKAVSEDAEPVINEDGE 60

Query: 61  ---DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  +
Sbjct: 61  VELGRGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQGYIGQQI 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTS--ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           A  ++ +  +++K   K++          +E + +         + I  +++  A LI  
Sbjct: 121 ALRLIAAVENRRKFQAKLIAVDLENEEIQVEVDGK-------HVLVIDSNNIDKANLIYQ 173

Query: 176 D 176
           D
Sbjct: 174 D 174


>gi|283797336|ref|ZP_06346489.1| hypothetical protein CLOM621_07330 [Clostridium sp. M62/1]
 gi|291075008|gb|EFE12372.1| hypothetical protein CLOM621_07330 [Clostridium sp. M62/1]
 gi|295090488|emb|CBK76595.1| Uncharacterized protein conserved in bacteria [Clostridium cf.
           saccharolyticum K10]
          Length = 155

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + + + P++E+  F  V +  + E     L+ ++++ +G +T+ DCE +S+ +   L
Sbjct: 8   ESKVEAWLLPLLEKYKFELVDVEYVREAGLWYLRAYIDK-EGGITVDDCEVVSRELGDWL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I   Y LEVSSPG+ RP+ ++ DF R  G  V   +      +++  G +     
Sbjct: 67  DKEDFIADSYILEVSSPGLGRPLKKEKDFARSLGKAVEVRLYRPINRQKEFTGALKAYDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               L  E        E ++ +    +   RL   
Sbjct: 127 DTVTLSMED-------ESELVLEKSDIALIRLAFD 154


>gi|160943265|ref|ZP_02090501.1| hypothetical protein FAEPRAM212_00751 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445504|gb|EDP22507.1| hypothetical protein FAEPRAM212_00751 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105167|emb|CBL02711.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
           prausnitzii SL3/3]
          Length = 161

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 11/160 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  + ++++P +E M  R   +   +E     L+I ++R DG M    C E+S A+ PIL
Sbjct: 10  AQRVEALVRPTVEGMGLRLWDVVFEKEGPDWYLRILIDR-DGTMDTDTCAEVSHALDPIL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLIGKIMGTS 139
           D  + I+  Y LEV SPG+ R + R   +    G  V  +++  +    ++L G + G  
Sbjct: 69  DEADPIDQSYYLEVGSPGLGRKLTRPEHYEALKGQKVRAKLIRPNADGVRELSGILTGRE 128

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
            +   LE E           +    ++    +L   ++L 
Sbjct: 129 GSTVTLETEN--------GPVTFEVNAASGVQLCDDEDLF 160


>gi|50083627|ref|YP_045137.1| hypothetical protein ACIAD0367 [Acinetobacter sp. ADP1]
 gi|51316595|sp|Q6FF42|RIMP_ACIAD RecName: Full=Ribosome maturation factor rimP
 gi|49529603|emb|CAG67315.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
          Length = 174

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-------------- 60
                    +  +I P ++        I  +   K  LL+IF+++               
Sbjct: 1   MKLSNKTQALHDLIAPAVQACDVNLWGIEFIPQGKRSLLRIFIDKPVDETAEPVLNEDGE 60

Query: 61  ---DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + ++DC  ++Q +  ILDV + I G Y LEVSSPG DRP  +      + G  V
Sbjct: 61  TELGRGIGVQDCVRVTQQVGAILDVHDPISGEYALEVSSPGWDRPFFQLEQMSAYIGQQV 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E  G+       + I   ++  A LI  D
Sbjct: 121 ALRLISAVENRRKFQAKLLLVDLENEMIQVEVDGK-----HVLEIDSHNIDKANLIYQD 174


>gi|291613947|ref|YP_003524104.1| hypothetical protein Slit_1480 [Sideroxydans lithotrophicus ES-1]
 gi|291584059|gb|ADE11717.1| protein of unknown function DUF150 [Sideroxydans lithotrophicus
           ES-1]
          Length = 141

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 76/151 (50%), Gaps = 13/151 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D++ +++  +  M +  V + +      L+++F+++ D  +++ DCE +S  +  +  VE
Sbjct: 2   DVAKLVETTLAGMGYELVDLEVSGRG--LMRVFMDKPD-GISVEDCERVSNQLVRLFTVE 58

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +   + RLEVSSPG+DR + ++SDF+R+ G     ++ +    ++   G I    +   
Sbjct: 59  GV--EYERLEVSSPGLDRVLKKESDFVRFAGQKAQIKVRVPLAGRKNFAGIIGEVKDGVV 116

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            L+ +           +AI   ++  ARL+ 
Sbjct: 117 QLDVDGSL--------VAIELSNMDKARLVP 139


>gi|262280757|ref|ZP_06058540.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257657|gb|EEY76392.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 174

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 23/179 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER--------------- 59
                 +  +  +I P ++        I  L   K  LL+I++++               
Sbjct: 1   MKLSNKSQALHDLIVPAVQACGVDLWGIEFLPQGKRSLLRIYIDKAVSEDAEPVLDEDGE 60

Query: 60  --DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
                 + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  +
Sbjct: 61  VEQGRGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQGYIGQQI 120

Query: 118 ACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           A  ++ +  +++K   K++        ++ E  G+       + I  +++  A LI  D
Sbjct: 121 ALRLIAAVENRRKFQAKLIAVDLENEEIQVEVDGQ-----HVLEIDSNNIDKANLIYQD 174


>gi|332704825|ref|ZP_08424913.1| Ribosome maturation factor rimP [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554974|gb|EGJ52018.1| Ribosome maturation factor rimP [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 170

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   I+   + VIE M      + ++ + +   + ++VE     +++    E S+ I 
Sbjct: 5   TEITNRIAQAARTVIEPMGLSLWGVEIVLDGRGQTVLVYVESP-TGVSVEQLAEASRNIG 63

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LDVE+ I G YRLE+SSPG +R          + G  V     +  GD++K  G +  
Sbjct: 64  LVLDVEDFIPGTYRLELSSPGFERSFFSTEQMRDYMGEKVEIRTSVPLGDRRKFRGILKE 123

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
             E    +E E +           + ++ +  ARLIV D
Sbjct: 124 VREDSIAVEAEGQL--------FNLRWEDVKKARLIVED 154


>gi|326791501|ref|YP_004309322.1| hypothetical protein Clole_2418 [Clostridium lentocellum DSM 5427]
 gi|326542265|gb|ADZ84124.1| protein of unknown function DUF150 [Clostridium lentocellum DSM
           5427]
          Length = 153

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 83/161 (51%), Gaps = 10/161 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                L   I   + P++ E+ +  V +  ++E     L+I++++ +G +T++DC+  S+
Sbjct: 1   MNKKELIEVIEGYLDPILAELHYELVDVEYVKEGPNYYLRIYIDK-EGGITIQDCQLTSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AI  +LD ++ I+  Y LEVSSPG+DR + +  +F R+ G +V  ++  +   ++   G+
Sbjct: 60  AIEKVLDEKDPIKDPYVLEVSSPGLDRVLKKDKEFERFKGRLVDVKLYEAINKQKHFTGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           ++  +E   +++ E           +     ++   RL +T
Sbjct: 120 LIKKTEDKLYIDDEG--------TNLEFEMKNVAVVRLAIT 152


>gi|229824766|ref|ZP_04450835.1| hypothetical protein GCWU000182_00115 [Abiotrophia defectiva ATCC
           49176]
 gi|229791095|gb|EEP27209.1| hypothetical protein GCWU000182_00115 [Abiotrophia defectiva ATCC
           49176]
          Length = 155

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 2/142 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                ++I P+I + ++  V +  +    N  L+ +V++ +G  ++ DCE++S+  S +L
Sbjct: 8   EKKAEALILPIINKNNYELVDVEFVREGSNWFLRAYVDK-EGGFSVNDCEKVSREFSDLL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ IE  Y LE+SSPG+ RP+ +  DF R  G  V  ++  +  ++++  G +     
Sbjct: 67  DKEDFIEESYILEISSPGLGRPLKKDKDFERSIGEEVEVKLYKAFEEQKEFSGTLEAYDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAI 162
               +  E   EK      IA+
Sbjct: 127 QTVTIGFEDNTEKTFERKNIAL 148


>gi|238854743|ref|ZP_04645073.1| conserved hypothetical protein [Lactobacillus jensenii 269-3]
 gi|260663975|ref|ZP_05864828.1| conserved hypothetical protein [Lactobacillus jensenii SJ-7A-US]
 gi|282932866|ref|ZP_06338263.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
 gi|313472266|ref|ZP_07812758.1| SP14.3 protein [Lactobacillus jensenii 1153]
 gi|238832533|gb|EEQ24840.1| conserved hypothetical protein [Lactobacillus jensenii 269-3]
 gi|239529662|gb|EEQ68663.1| SP14.3 protein [Lactobacillus jensenii 1153]
 gi|260561861|gb|EEX27830.1| conserved hypothetical protein [Lactobacillus jensenii SJ-7A-US]
 gi|281302901|gb|EFA95106.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 158

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +++++ P+ E+     V +  ++E     L+I+V+R +  + + +   LS+ +S
Sbjct: 2   TKIVDLVTNLVSPIAEKRGDELVDVEYVKEQNQYYLRIYVDRGESGIDIEEIAALSEMVS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ +     +          ++   G +
Sbjct: 62  EELDKLNPDPFTEPYMLELSSPGLERPIKNERDWEKAVNKYIHVACYQKIDGQKAFDGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +   +    L+     +      ++ I   ++ +AR
Sbjct: 122 LSKDDDKITLKI----KIKTRTKELEIPVGAIANAR 153


>gi|256846937|ref|ZP_05552391.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|294784278|ref|ZP_06749573.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
 gi|256717735|gb|EEU31294.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
 gi|294488144|gb|EFG35495.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
          Length = 156

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I   
Sbjct: 7   IVEKITKIVNPFIEEMNLSLVDVEYVQDGGYWYIRIFIENLNGDLNIEDCSKLSSKIED- 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             VE +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I   +
Sbjct: 66  -KVEGLIEHKFFLEVSSPGLERPLKKIEDYVRFTGEKITLHLKHKLDDKKQFKAIIKEVN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +K+        +I I F+ +  A ++ 
Sbjct: 125 GDNIIFLIDKK--------EIEIKFNEIRKANILF 151


>gi|148651971|ref|YP_001279064.1| hypothetical protein PsycPRwf_0155 [Psychrobacter sp. PRwf-1]
 gi|172048444|sp|A5WBS3|RIMP_PSYWF RecName: Full=Ribosome maturation factor rimP
 gi|148571055|gb|ABQ93114.1| protein of unknown function DUF150 [Psychrobacter sp. PRwf-1]
          Length = 166

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 18/164 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER------DDGNMTLRDCEELSQAI 76
            ++ +I P +         +  L      LL+I++E        D  +T+ +C  ++  +
Sbjct: 9   QLTDIIAPAVAACDVALWGVEFLPQGGRSLLRIYIEALPEDKAADKQVTIENCAAVTHQV 68

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG----DKQKLI 132
           S +L+V + I G Y LEVSSPG+DRP         + G  +   ++ + G     ++K+ 
Sbjct: 69  SGVLEVHDPIAGEYVLEVSSPGLDRPFFAPEQMTDYMGQTINLRLIQAVGSGSSKRRKVT 128

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           GK+    +    +          +  +  I+ D++  A LI  D
Sbjct: 129 GKLEQLDDKQLSV-------VTADGERYDIALDNIDKANLIYQD 165


>gi|317490694|ref|ZP_07949160.1| hypothetical protein HMPREF1023_02860 [Eggerthella sp. 1_3_56FAA]
 gi|316910225|gb|EFV31868.1| hypothetical protein HMPREF1023_02860 [Eggerthella sp. 1_3_56FAA]
          Length = 159

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 11/157 (7%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
                   +   + P  E+     V + +   K    +++ ++  D  ++  +       
Sbjct: 1   MLSKKEQQLLDALAPRAEQEGVEIVTVEVAGAKKAPTIRVCIDTPD-GVSFDELSSAQAW 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I+ ++D  +   G Y LEVSSPGIDRP+     F R+ G     +       +    G I
Sbjct: 60  INDLMDELDPFPGAYTLEVSSPGIDRPLRTAEHFARFVGDTAVLKT-QPVDGRGSWTGAI 118

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                    L+ +          +  I  D++  A L
Sbjct: 119 ASVEGDVVVLDVDG--------AEARIPMDTIKRAHL 147


>gi|299771784|ref|YP_003733810.1| hypothetical protein AOLE_17760 [Acinetobacter sp. DR1]
 gi|298701872|gb|ADI92437.1| hypothetical protein AOLE_17760 [Acinetobacter sp. DR1]
          Length = 175

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 28/182 (15%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD-------------- 60
                 +  +  +I P ++        I  L   K  LL+I++++               
Sbjct: 1   MKLSNKSQALHDLIVPAVQACGVDLWGIEFLPQGKRSLLRIYIDKAVSEEDAEPVLNEDG 60

Query: 61  ----DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV 116
                  + ++DC  ++Q +  +LDV + I G Y LEVSSPG DRP  +      + G  
Sbjct: 61  EVELGRGIGVQDCVRVTQQVGAMLDVHDPISGEYSLEVSSPGWDRPFFQLEQLQGYIGQQ 120

Query: 117 VACEIVLSSGDKQKLIGKIMGTS--ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +A  ++ +  +++K   K++          +E + +         + I  +++  A LI 
Sbjct: 121 IALRLIAAVENRRKFQAKLIAVDLENEEIQVEVDGK-------HVLEIDSNNIDKANLIY 173

Query: 175 TD 176
            D
Sbjct: 174 QD 175


>gi|71064648|ref|YP_263375.1| hypothetical protein Psyc_0067 [Psychrobacter arcticus 273-4]
 gi|91207994|sp|Q4FVL7|RIMP_PSYA2 RecName: Full=Ribosome maturation factor rimP
 gi|71037633|gb|AAZ17941.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 166

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 21/173 (12%)

Query: 19  MGLAGDISSV---IQPVIEEMSFRSVQISLLE-EKNLLLQIFVER------DDGNMTLRD 68
           M L+  ++ +   I P +         I         LL+I++E        +  +T+ +
Sbjct: 1   MKLSTKVTELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIEN 60

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD- 127
           C  ++  +S IL+V + I G + LEVSSPG DR          + G  V+  ++ + G+ 
Sbjct: 61  CAAVNHQVSGILEVHDPIAGEFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEG 120

Query: 128 ---KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
              ++K  G +     T   L          +  Q  I+  ++  A LI  D 
Sbjct: 121 DKKRRKATGTLNSIDGTSLKLT-------ATDGEQFEIALSNIDKANLIYEDA 166


>gi|153939522|ref|YP_001391720.1| hypothetical protein CLI_2478 [Clostridium botulinum F str.
           Langeland]
 gi|166987487|sp|A7GG10|RIMP_CLOBL RecName: Full=Ribosome maturation factor rimP
 gi|152935418|gb|ABS40916.1| conserved hypothetical protein [Clostridium botulinum F str.
           Langeland]
 gi|295319746|gb|ADG00124.1| conserved hypothetical protein [Clostridium botulinum F str.
           230613]
          Length = 153

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  ++   I+P+ E + +    I  ++  K   L+I+++  +  ++L  CE++S+
Sbjct: 1   MSKHSLIENLKEQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDS-ENGVSLEGCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +  +   K+K  G+
Sbjct: 60  AVSELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSAIDKKKKYEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +E    ++ E        E  + I  + +    L
Sbjct: 120 LVDFNENEIDIKVE--------ENIVTIPREKISKTTL 149


>gi|238019443|ref|ZP_04599869.1| hypothetical protein VEIDISOL_01312 [Veillonella dispar ATCC 17748]
 gi|237864142|gb|EEP65432.1| hypothetical protein VEIDISOL_01312 [Veillonella dispar ATCC 17748]
          Length = 170

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCE 70
            E        +   +SSV++ +I       V +  + E++  L++++++  G + L DC+
Sbjct: 14  KEAMAMKREAVEEFVSSVVEGIIAGTEMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQ 72

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            +S+ +S +LD ++ I  +Y LEVSSPG+DR + +  D +R+NG  V  ++       ++
Sbjct: 73  LVSEKLSAVLDEKDPITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKPINGSKQ 132

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             G + G ++T                  +     ++   RL
Sbjct: 133 FTGVLEGFTDTTIDFTINGES--------MTFERSAIAQIRL 166


>gi|269797843|ref|YP_003311743.1| hypothetical protein Vpar_0782 [Veillonella parvula DSM 2008]
 gi|269094472|gb|ACZ24463.1| protein of unknown function DUF150 [Veillonella parvula DSM 2008]
          Length = 152

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +SSV++ +I       V +  + E++  L++++++  G + L DC+ +S+ 
Sbjct: 1   MKREAVEEFVSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKP-GGVDLDDCQLVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LD ++ I  +Y LEVSSPG+DR + +  D +R+NG  V  ++  +    ++  G +
Sbjct: 60  LSAVLDEKDPITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKAINGSKQFTGAL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G ++T                  +     ++   RL
Sbjct: 120 QGFTDTTIEFTINGES--------MTFERSTIAQIRL 148


>gi|237743253|ref|ZP_04573734.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
 gi|229433032|gb|EEO43244.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
          Length = 156

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ ++ P +EEM+   V +  ++      ++IF+E  +G++++ DC +LS  I   
Sbjct: 7   IVEKITEIVNPFVEEMNLSLVDVEYVQDGAYWYIRIFIENLNGDLSIEDCSKLSSKIEDK 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +  E +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I   +
Sbjct: 67  I--EKLIEHKFFLEVSSPGLERPLKKIEDYIRFTGEKITLHLKHKLDDKKQFKAIIKEVN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   + +        +I I F+ +  A ++ 
Sbjct: 125 GNNIIFLIDNK--------EIEIKFNEIRKANILF 151


>gi|19705319|ref|NP_602814.1| putative cytoplasmic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|34223125|sp|Q8RHJ4|RIMP_FUSNN RecName: Full=Ribosome maturation factor rimP
 gi|19713290|gb|AAL94113.1| Hypothetical cytosolic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 156

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I   
Sbjct: 7   IVEKITRIVNPFIEEMNLSLVDVEYVQDGGYWYVRIFIENLNGDLNIEDCSKLSSKIED- 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             VE +IE  + LEVSSPG++RP+ +  D+ R+ G  +   +     DK++    I   +
Sbjct: 66  -KVEELIEHKFFLEVSSPGLERPLKKLEDYTRFIGEKITLHLKHKLDDKKQFKTIIKEVN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +K+        ++ I F+ +  A ++ 
Sbjct: 125 GDNIIFLMDKK--------EVEIKFNEIRKANILF 151


>gi|28210958|ref|NP_781902.1| hypothetical protein CTC01272 [Clostridium tetani E88]
 gi|34222839|sp|Q895K1|RIMP_CLOTE RecName: Full=Ribosome maturation factor rimP
 gi|28203397|gb|AAO35839.1| protein associated with NUS operon [Clostridium tetani E88]
          Length = 153

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            ++  + +P++ ++ +    +  + E     L+I+++  +  + L DCE++S+A+S +LD
Sbjct: 8   DNLKELTEPIVNDLDYELYYLEFVNENKENYLRIYIDS-ESGIGLEDCEKVSRAVSAMLD 66

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            ++ I+  Y LEVSSPG++R +          G      +       +K  GK+      
Sbjct: 67  EKDPIDTSYYLEVSSPGLERQLYDDKHIEDNIGKTACVRLESLFNGGRKFEGKLKSFDNE 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              LE      K        I    +    LI
Sbjct: 127 NLTLEINAEDFK--------IPRKKIKRINLI 150


>gi|168187911|ref|ZP_02622546.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
 gi|169294239|gb|EDS76372.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 154

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 76/148 (51%), Gaps = 10/148 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +I+ +I+P++EE+++    I   +E+    L+I+++     + L DCE++S+ +S ILD
Sbjct: 9   DEINKLIKPIVEELNYELYYIEYVVEQNENYLRIYIDSS-KGINLDDCEKVSRRVSEILD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            ++ I   Y LEVSSPGI+R +       ++  + +  ++       ++  GK++  ++ 
Sbjct: 68  EKDPISDSYYLEVSSPGIERVLYTDEHLHKYTNNQIIIKLGKLFEGSREHQGKLLSFNDD 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLS 169
              +E+E           I+I  D +  
Sbjct: 128 TVVIERENES--------ISIPRDRIKK 147


>gi|239626255|ref|ZP_04669286.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520485|gb|EEQ60351.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 155

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 2/146 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
                  +   + P++EE  F  V +  ++E     L+ ++++ +G + + DCE +S+ +
Sbjct: 4   KENYESRVERYLLPLMEEHHFELVDVEYVKEAGTWYLRAYIDK-EGGIAVDDCEVISRKL 62

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              LD E+ I+  Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G + 
Sbjct: 63  GDWLDKEDFIDESYILEVSSPGLGRPLKKEKDFIRSMGKDVDVRLYRQIDKQKEFTGALS 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAI 162
                   L  E   +    +  IA+
Sbjct: 123 AYDGNTVTLTMEDGSQMVFEKPDIAL 148


>gi|299144045|ref|ZP_07037125.1| 15 kDa protein [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518530|gb|EFI42269.1| 15 kDa protein [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 153

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 19/170 (11%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L   I ++ +    E+ +  V +   +  K+ LL IF+ + +  + + DC  +S+
Sbjct: 1   MKKNDLIDKIKNIAEECSNEIGYEIVDVEYQVGNKHDLLSIFIYKKE-GIDINDCTNMSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I  ILD E+II+  Y LE+SSPG+DRP+  K D+ R  G+ V  ++      K+ + G 
Sbjct: 60  IIESILDKEDIIDKPYYLEISSPGLDRPLKTKDDYRRNVGNEVTVKLYAPLDGKKLIEGI 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
           +    E+   L  E           I I   S+          L+R S+ 
Sbjct: 120 LENYDESIIILSVEDEK--------IEIPIKSIS---------LMRQSIK 152


>gi|118443860|ref|YP_878212.1| hypothetical protein NT01CX_2139 [Clostridium novyi NT]
 gi|259585741|sp|A0Q0R0|RIMP_CLONN RecName: Full=Ribosome maturation factor rimP
 gi|118134316|gb|ABK61360.1| Hypothetical UPF0090 protein [Clostridium novyi NT]
          Length = 154

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +I+ +I+P++EE+++    I  + E     L+I+++     + L DCE++S+ +S ILD
Sbjct: 9   DEINKLIKPIVEELNYELYYIEYVREQNENYLRIYIDSS-KGINLEDCEKVSRKVSDILD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            ++ I   Y LEVSSPGI+R +  +    ++  + +  ++       ++  G ++  ++ 
Sbjct: 68  EKDPISDSYYLEVSSPGIERVLYTEEHLHKYTNNQIIVKLAKLFEGSREHQGNLISFNDD 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLS 169
              +EKE           I I  + +  
Sbjct: 128 TVTIEKENES--------INIPRERIKK 147


>gi|93004903|ref|YP_579340.1| hypothetical protein Pcryo_0072 [Psychrobacter cryohalolentis K5]
 gi|122416155|sp|Q1QEP7|RIMP_PSYCK RecName: Full=Ribosome maturation factor rimP
 gi|92392581|gb|ABE73856.1| protein of unknown function DUF150 [Psychrobacter cryohalolentis
           K5]
          Length = 166

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 21/173 (12%)

Query: 19  MGLAGDISSV---IQPVIEEMSFRSVQISLLE-EKNLLLQIFVER------DDGNMTLRD 68
           M L+  ++ +   I P +         I         LL+I++E        +  +T+ +
Sbjct: 1   MKLSTKVTELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIEN 60

Query: 69  CEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD- 127
           C  ++  +S IL+V + I G + LEVSSPG DR          + G  V+  ++ + G+ 
Sbjct: 61  CAAVNHQVSGILEVHDPISGEFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEG 120

Query: 128 ---KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
              ++K  G +     T   L          +  Q  I+  ++  A LI  D 
Sbjct: 121 DKKRRKATGTLNSIDATSLKLT-------ATDGEQFEIALSNIDKANLIYEDA 166


>gi|256028608|ref|ZP_05442442.1| putative cytoplasmic protein [Fusobacterium sp. D11]
 gi|289766526|ref|ZP_06525904.1| conserved hypothetical protein [Fusobacterium sp. D11]
 gi|289718081|gb|EFD82093.1| conserved hypothetical protein [Fusobacterium sp. D11]
          Length = 156

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ ++ P +EEM+   V +  ++      ++IF+E  +G++++ DC +LS  I   
Sbjct: 7   IVEKITEIVNPFVEEMNLSLVDVEYVQDGAYWYIRIFIENLNGDLSIEDCSKLSSKIEDK 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +  E +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I   +
Sbjct: 67  I--EKLIEHKFFLEVSSPGLERPLKKIEDYIRFTGEKITLHLKHKLDDKKQFKAIIKEVN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +K+        +I I F+ +  A ++ 
Sbjct: 125 GNNIIFLIDKK--------EIEIKFNEIRKANILF 151


>gi|291543556|emb|CBL16665.1| Uncharacterized protein conserved in bacteria [Ruminococcus sp.
           18P13]
          Length = 158

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 71/152 (46%), Gaps = 10/152 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + ++  P+ E +      +   +   +  L++F+++D+  +++ DCE +S+ +S +L
Sbjct: 10  EQKVYALAAPLAESLGLVIWDVRFEKEGASWYLRVFIDKDE-GISIDDCEAMSRPLSDLL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMGTS 139
           D  + I+  Y LEV S G++R +VR+S F    G VV   ++      +++ +G +    
Sbjct: 69  DEADPIDQQYFLEVGSAGLERDLVRESHFAASIGAVVRMRLIRPDETGQKEYVGALESFD 128

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +    L  E        +  +   F ++   +
Sbjct: 129 KEQVRLVLED-------DTTVTAPFANIAHIK 153


>gi|313892594|ref|ZP_07826181.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
 gi|313118991|gb|EFR42196.1| conserved hypothetical protein [Dialister microaerophilus UPII
           345-E]
          Length = 156

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 79/149 (53%), Gaps = 4/149 (2%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   + ++IQPV+E+     V +  + E+N +L+IF+++ DG + L DC+E+S +
Sbjct: 1   MSHKEIESAVEALIQPVLEKKGIEVVDVEYVRERNWILRIFIDK-DGGVDLNDCQEISVS 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLI 132
              ++D  ++I  +Y LEVSSPGIDR + +  DF+R+    V+ ++     +    ++  
Sbjct: 60  AGELIDKNDLISDNYMLEVSSPGIDRVLKKDKDFIRYKDSKVSVKLFAPVEELNLDKEFT 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIA 161
             + G       L  +   E  +++ +I+
Sbjct: 120 AILNGLVNDEISLILDDGREIFLSKKKIS 148


>gi|187778985|ref|ZP_02995458.1| hypothetical protein CLOSPO_02580 [Clostridium sporogenes ATCC
           15579]
 gi|187772610|gb|EDU36412.1| hypothetical protein CLOSPO_02580 [Clostridium sporogenes ATCC
           15579]
          Length = 153

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  ++   I+P+++ +S+    I  ++  K   L+I+++  +  ++L  CE++S+
Sbjct: 1   MSKHSLIENLKKQIEPIVKGLSYDLYHIEFVKEGKENYLRIYIDS-ESGVSLEGCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S +LD  + I+  Y LEVSSPGIDR +       ++ G+ +   +      K+K  G+
Sbjct: 60  AVSELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLEKYKGYNIVLNLYSPIDKKKKYEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++  +E    ++ E        E  + I  + +    L
Sbjct: 120 LVDFNENEINIKVE--------ENIVIIPREKISKTTL 149


>gi|225390158|ref|ZP_03759882.1| hypothetical protein CLOSTASPAR_03908 [Clostridium asparagiforme
           DSM 15981]
 gi|225043752|gb|EEG53998.1| hypothetical protein CLOSTASPAR_03908 [Clostridium asparagiforme
           DSM 15981]
          Length = 156

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 9/159 (5%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
                  + + + P++EE  F  V +  ++E     L+ ++++ +G + + DCE +S+ +
Sbjct: 5   KESYESRVEAYLLPLMEEHHFELVDVEYVKEAGTWYLRAYIDK-EGGIAVDDCEVISRKL 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
              LD E+ I   Y LEVSSPG+ RP+ ++ DF+R  G  V   +      +++  G + 
Sbjct: 64  GDWLDKEDFISESYILEVSSPGLGRPLKKEKDFVRSLGKDVEVRLYRMRDKQKEFTGALS 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                   L+ E          Q+      +   RL   
Sbjct: 124 AYDAQTVTLDMED-------GSQMVFDRADIALIRLAFD 155


>gi|315653431|ref|ZP_07906353.1| protein of hypothetical function DUF150 [Lactobacillus iners ATCC
           55195]
 gi|315489356|gb|EFU78996.1| protein of hypothetical function DUF150 [Lactobacillus iners ATCC
           55195]
          Length = 158

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 7/152 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD
Sbjct: 6   DKVIEVITPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLD 65

Query: 82  --VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
               + +   Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++   
Sbjct: 66  LINPDPLPDPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                LE     +    + +I I  + + + R
Sbjct: 126 MDKIILEI----KIKTQQQKITIPRNMIANIR 153


>gi|268608288|ref|ZP_06142015.1| hypothetical protein RflaF_02144 [Ruminococcus flavefaciens FD-1]
          Length = 157

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +  +I+P+ +E+ +    +  ++E     L+IF+++D+  +++ DCE  +  IS 
Sbjct: 8   GTEQKVYDLIKPITDELGYYLWDVCYVKEGAMWYLRIFIDQDE-GISIDDCERATAPISD 66

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD  + +   Y LEV S G++R +V++  F    G  V  +   +   ++++  +++G 
Sbjct: 67  ILDEADPVPQQYMLEVGSAGLERELVKEEHFEVCKGDTVTLKFFRAVDGEKEIRAELVGA 126

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            + G  + KE   EK        I    +   +L + 
Sbjct: 127 DKDGITVIKEDGTEK-------TIPLADVSVVKLWLD 156


>gi|126657164|ref|ZP_01728330.1| hypothetical protein CY0110_24586 [Cyanothece sp. CCY0110]
 gi|126621435|gb|EAZ92146.1| hypothetical protein CY0110_24586 [Cyanothece sp. CCY0110]
          Length = 151

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+++EM    V++     ++  +L++ +   D + +L DCE++S+A+  +
Sbjct: 5   LIPQIIDLATPIVQEMGLDVVEVVFQTNKRPPVLRVDIRNPDSDTSLNDCEQVSRALEAV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+ G Y LE+SSPGI R +  + DF+ + G  V         DK++  G++ G  
Sbjct: 65  LDETAIMPGAYVLEISSPGISRYLSDERDFVAFKGFEVNVTTNPPYKDKKEWQGRLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           +   +L ++ R       +   +    
Sbjct: 125 DKAVYLNRKGRAIAIPCSVITQVQLAD 151


>gi|313885302|ref|ZP_07819053.1| conserved hypothetical protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619408|gb|EFR30846.1| conserved hypothetical protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 157

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 8/156 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +I+  +     R V +  L+E     L+++ ++ DG + L DC  +S+ +S  
Sbjct: 4   VLEKVRPIIEETVAANDCRLVDLEYLKEGPNWYLRVYADK-DGGIDLDDCAFISEKLSEA 62

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEVSSPG +RP+   +D     G  V  +  +    ++   G ++ 
Sbjct: 63  LDLIKPDPFPKSYYLEVSSPGAERPLKTAADIEAAVGEYVHFDYYVPQYGEKFHEGNLLA 122

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +T + +E + +        ++ I   ++  ARL 
Sbjct: 123 VEDTLYRIEVKDK----TRRKELEIDKKAVAKARLA 154


>gi|319944111|ref|ZP_08018389.1| hypothetical protein HMPREF0551_1236 [Lautropia mirabilis ATCC
           51599]
 gi|319742605|gb|EFV95014.1| hypothetical protein HMPREF0551_1236 [Lautropia mirabilis ATCC
           51599]
          Length = 208

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 6/115 (5%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG--NMTLRDCEELSQAISPILDVENI 85
           ++ PV+  M +  V +  +     LL+I +E  D    +TL DCE +S+ +S +  VE++
Sbjct: 1   MVDPVVSGMGYEVVDVEFVAGG--LLRITIENVDHAQPITLDDCERVSEQLSHLFLVEDV 58

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              + RLE+SSPG+DR + R  DF R+ G  V   + +    ++   G ++    
Sbjct: 59  --DYDRLEISSPGLDRRLRRPQDFARFTGDEVKLWLRMPQDGRRTFEGVLLSAEP 111


>gi|227890228|ref|ZP_04008033.1| protein of hypothetical function DUF150 [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849230|gb|EEJ59316.1| protein of hypothetical function DUF150 [Lactobacillus johnsonii
           ATCC 33200]
          Length = 172

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 16  TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 75

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 76  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKAFEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE     +       I I    + S+R
Sbjct: 136 KDLNQDQIVLEV----KIKTRRKYITIPRKVIASSR 167


>gi|302387321|ref|YP_003823143.1| protein of unknown function DUF150 [Clostridium saccharolyticum
           WM1]
 gi|302197949|gb|ADL05520.1| protein of unknown function DUF150 [Clostridium saccharolyticum
           WM1]
          Length = 155

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 2/149 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELS 73
           +             + P+++E  F  V +  ++E  +  L+ ++++ +G +T+ DCE +S
Sbjct: 1   MAKKEEYEAKTEGFLLPLMKENHFELVDVEYVKEAGSWYLRAYIDK-EGGITVDDCETIS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +   LD ++ I   Y LEVSSPG+ RP+ +  DF R  G  V  ++      ++   G
Sbjct: 60  RRLGDWLDEKDFIADSYILEVSSPGLGRPLKKDKDFNRSIGKEVDIKLYKPLNKQKDFTG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAI 162
            +         + +E   E  +N  +IA+
Sbjct: 120 TLTSYDRETVTITQEDGIELVLNRPEIAL 148


>gi|290969146|ref|ZP_06560671.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780652|gb|EFD93255.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
          Length = 153

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 1/125 (0%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   ++   + ++   S   V +  + EK+  L++F+++ +G + L DC+++S+ 
Sbjct: 4   MKREQIETWVTEKAEQLLASTSLELVDVEYVREKDWYLRVFIDK-EGGVDLEDCQQVSEK 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S +LD E+ I  +Y LEVSSPG+DR + +  DFLR+ G  V          K+  +G++
Sbjct: 63  LSKVLDREDPIRDNYLLEVSSPGLDRILKKDKDFLRYAGRTVDIHFFAPREGKKDWVGEL 122

Query: 136 MGTSE 140
           +    
Sbjct: 123 VKKDG 127


>gi|319947586|ref|ZP_08021816.1| hypothetical protein containing DUF150 [Streptococcus australis
           ATCC 700641]
 gi|319746274|gb|EFV98537.1| hypothetical protein containing DUF150 [Streptococcus australis
           ATCC 700641]
          Length = 195

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ ++QP I+   F  V +   +   + +L IFV++  G +TL D  +L++ ISP+
Sbjct: 43  IVELVTEILQPAIQA-PFELVDVEYGKMGGDYVLSIFVDKP-GGITLNDTADLTEVISPL 100

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K    +  G  +   +  +   ++ + G ++ 
Sbjct: 101 LDQIQPDPFPEQYFLEVTSPGLERPLKTKDAVEKSLGQYIHVSLYKAVDKQKVIEGTLVK 160

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    +E   +  K      I I +  +  ARL V
Sbjct: 161 FEDDQLTMEYMDKTRKK----TIEIPYSLVSKARLAV 193


>gi|326803577|ref|YP_004321395.1| hypothetical protein HMPREF9243_1141 [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650272|gb|AEA00455.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
          Length = 157

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 8/157 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + ++I+  I EM ++   I+  +  K+  L+I+++ +D  +T+ DC + S+ IS 
Sbjct: 3   KVTDQVKALIEADINEMGYQLFDITFSKEGKDWYLRIYIDNND-GITIADCVKASEKISE 61

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           ILD   ++ I   Y LEVSSPG +RP+   +   +  G  V           + + G+++
Sbjct: 62  ILDNVEDDPIPQAYYLEVSSPGAERPLNNDNAIQQAIGKWVHLNFYHEIDGSKFVEGRLL 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             SE  F LE + +  + + +        S+   RL 
Sbjct: 122 EASEQYFTLEVKDKTRRLVQD----FPRKSVSLIRLA 154


>gi|116748666|ref|YP_845353.1| hypothetical protein Sfum_1226 [Syntrophobacter fumaroxidans MPOB]
 gi|259645123|sp|A0LHL6|RIMP_SYNFM RecName: Full=Ribosome maturation factor rimP
 gi|116697730|gb|ABK16918.1| protein of unknown function DUF150 [Syntrophobacter fumaroxidans
           MPOB]
          Length = 168

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 10/153 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  + +PVI       ++I    E    +L++FV++ +G +++ DC  +S+ +  +
Sbjct: 17  IVRQVWDLTEPVIRAEGMEIIEIEYRRESPGWVLRVFVDQ-EGGVSVDDCARISRVVGDL 75

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV +II   Y LEVSSPG++RP+ ++  F +  G V+  + ++  G ++   G +    
Sbjct: 76  LDVADIIHYPYHLEVSSPGLNRPLRKREQFAKVVGKVIEVKTLVPFGTRRNFKGILKEVG 135

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                ++ + +           I F ++  ARL
Sbjct: 136 VERIRMDCDNQL--------FEIPFSNMDRARL 160


>gi|282857787|ref|ZP_06266996.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
 gi|282584457|gb|EFB89816.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
          Length = 165

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 11/157 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             IS  ++ ++E + +  V    ++E    +L+++++R DG + L DCE  ++ I  +LD
Sbjct: 4   EKISGQLKTLVESLGYEFVGAETVKEAGSQILRVYIDR-DGGVGLDDCERSAKEIGALLD 62

Query: 82  -VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              +  E HY LEVSSPG++RP+ +  D+ R+ G  V   +      ++++   I G  +
Sbjct: 63  TAADAFEDHYLLEVSSPGLERPLFKAEDYARFAGRPVNVRLKGVYEGRRRVTAVIEGVKD 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
               L+             + +    +  A L+  +E
Sbjct: 123 GSVLLDC--------GGEPLDLPLAEIQRAHLVYVEE 151


>gi|296328567|ref|ZP_06871086.1| probable cytoplasmic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154376|gb|EFG95175.1| probable cytoplasmic protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 156

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ ++ P IEEM+   V +  +++     ++IF+E  +G++ + DC +LS  I   
Sbjct: 7   IVEKITRIVNPFIEEMNLSLVDVEYVQDGGYWYVRIFIENLNGDLNIEDCSKLSSKIEDK 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +  E +IE  + LEVSSPG++RP+ +  D+ R+ G  +   +     DK++    I   +
Sbjct: 67  I--EELIEHKFFLEVSSPGLERPLKKLEDYTRFIGEKITLHLKHKLDDKKQFKTIIKEVN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +K+        ++ I F+ +  A ++ 
Sbjct: 125 GDNIIFLMDKK--------EVEIKFNEIRKANILF 151


>gi|15895074|ref|NP_348423.1| hypothetical protein CA_C1798 [Clostridium acetobutylicum ATCC 824]
 gi|34223132|sp|Q97I55|RIMP_CLOAB RecName: Full=Ribosome maturation factor rimP
 gi|15024771|gb|AAK79763.1|AE007689_1 Uncharacterized protein, YhbC family [Clostridium acetobutylicum
           ATCC 824]
 gi|325509212|gb|ADZ20848.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 149

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 71/133 (53%), Gaps = 2/133 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  +I+PV+E + +    I +++E     L++++++ +  ++L DCE++S+AIS +
Sbjct: 1   MIDKLIEIIRPVVESLGYEFYHIEIVKEDGERYLRVYIDK-ENGISLDDCEKVSRAISDL 59

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD ++ I   Y LEVSSPGI R +  +    ++ G+ V  ++  S        GK++  +
Sbjct: 60  LDEKDPIPYSYYLEVSSPGIYRTLFTEEHLKKYIGNTVDIKLKSSLEKSTNYSGKLIDVN 119

Query: 140 ETGFFLEKEKRGE 152
           E    +      E
Sbjct: 120 EEDIVIVVSDNRE 132


>gi|160880909|ref|YP_001559877.1| hypothetical protein Cphy_2778 [Clostridium phytofermentans ISDg]
 gi|226701647|sp|A9KNW8|RIMP_CLOPH RecName: Full=Ribosome maturation factor rimP
 gi|160429575|gb|ABX43138.1| protein of unknown function DUF150 [Clostridium phytofermentans
           ISDg]
          Length = 155

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 9/155 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                 ++ P++EE +F  V +  ++E  N  L+ ++++ +G +T+ DCE +S+  S +L
Sbjct: 8   ELKAEQLLTPIMEENNFELVDVEYVKEVGNWYLRAYIDK-EGGITVDDCEVVSRRFSDLL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D ++ I   Y LEVSSPG+ R + +  DF R  G  V  ++  +   ++   G +    +
Sbjct: 67  DEKDFIPDAYILEVSSPGLGRQLKKDKDFKRSLGEEVEIKLYKAINKQKDFEGILTDFDQ 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               +E         +   +  +   +   RL + 
Sbjct: 127 EKLIIE-------QADGTTMEFARADIAMVRLALD 154


>gi|284108774|ref|ZP_06386439.1| protein of unknown function DUF150 [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829848|gb|EFC34139.1| protein of unknown function DUF150 [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 157

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 77/153 (50%), Gaps = 2/153 (1%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           GL   +  + +P+ + +    +++    +    +   +   +G + ++DCE+  Q++   
Sbjct: 3   GLGSLVQGIAEPIAKALRLEIIEVECHGQGAKTIVRVIVEKEGGVGIQDCEQFHQSLGRA 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + +   YRL+VSSPG+DRP+ R+ D+ +  G  +  ++      K  ++G++    
Sbjct: 63  LDVADPVAHAYRLDVSSPGLDRPLKRRKDYDQAVGRTIRVKVHAPVQGKGTVVGQLAEVD 122

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  L+      K     ++A+ +D++  A+L
Sbjct: 123 DQGITLQV--PVRKSRTPRRVALEWDAIAHAKL 153


>gi|118594130|ref|ZP_01551477.1| hypothetical protein MB2181_00640 [Methylophilales bacterium
           HTCC2181]
 gi|118439908|gb|EAV46535.1| hypothetical protein MB2181_00640 [Methylophilales bacterium
           HTCC2181]
          Length = 145

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 11/149 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+ S I+ ++ ++ +  V + ++     LL++F+++ +  +T+ DC  +S  ++  L VE
Sbjct: 4   DVESFIEKMVTQLGYELVDLEIINH-GQLLRVFIDKPE-IVTIDDCVLVSNQLNHALSVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
                  RLE+SSPG+DR + +  DF R++G  +  +      +++   G + G      
Sbjct: 62  EEF-DFGRLEISSPGVDRVIKKLEDFGRFDGEKIKIKTRSPISNRRNFSGVLRGIKAGFI 120

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            LE +           + I F+++  ARL
Sbjct: 121 LLEFDG--------SIVEIDFENIDRARL 141


>gi|259501584|ref|ZP_05744486.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|302191442|ref|ZP_07267696.1| hypothetical protein LineA_05504 [Lactobacillus iners AB-1]
 gi|309807190|ref|ZP_07701164.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
 gi|259167102|gb|EEW51597.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|308166411|gb|EFO68616.1| conserved hypothetical protein [Lactobacillus iners LactinV 03V1-b]
          Length = 158

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD
Sbjct: 6   DKVIEVITPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLD 65

Query: 82  --VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
               + +   Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++   
Sbjct: 66  LINPDPLPDPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                LE     +    + +IAI  + + + R
Sbjct: 126 MDKIILEI----KIKTQQKKIAIPRNMIANIR 153


>gi|260887248|ref|ZP_05898511.1| putative cytoplasmic protein [Selenomonas sputigena ATCC 35185]
 gi|330838994|ref|YP_004413574.1| Ribosome maturation factor rimP [Selenomonas sputigena ATCC 35185]
 gi|260863310|gb|EEX77810.1| putative cytoplasmic protein [Selenomonas sputigena ATCC 35185]
 gi|329746758|gb|AEC00115.1| Ribosome maturation factor rimP [Selenomonas sputigena ATCC 35185]
          Length = 150

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
               +   + +++Q ++++ +   V +  ++E++  L++++++ +G + + DC+ +S+ +
Sbjct: 1   MAKHIEEAVEAIVQEIVQDSNLEVVDVEYVKERDWYLRVYLDK-EGGIEIDDCQRVSETL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             ILD ++++   Y LEVSSPG+DR + +  DF R  G  V          K+  +G + 
Sbjct: 60  EQILDEKDLLTEAYILEVSSPGLDRVLKKARDFEREQGKAVDVTFYAPVDGKKTWVGTLT 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G       +  +             +  + +   RL
Sbjct: 120 GYDPGKNAIVLDGEK---------ELPLEKIAQVRL 146


>gi|325685947|gb|EGD28010.1| hypothetical protein HMPREF5505_0324 [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 176

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEE 71
            R      L   I   I+PVI       V +  ++EK+   L+I+V++    + +    E
Sbjct: 15  RRKILPKNLT-PILEAIEPVIIGHDCELVDLEYVKEKSQYYLRIYVDKQPNGIDIETIAE 73

Query: 72  LSQAISPIL--DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           LS+ +   L     + +   Y LE+SSPG++RP+ ++ D+ +  G  +   +      ++
Sbjct: 74  LSELVGEKLDSMQPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYIHVGLYQKLEGEK 133

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              G ++   +    LE     +      Q+ I    + SAR
Sbjct: 134 VFEGHLLDLDDQEIKLEI----KIKTRRKQLTIPRKQIASAR 171


>gi|302670326|ref|YP_003830286.1| hypothetical protein bpr_I0962 [Butyrivibrio proteoclasticus B316]
 gi|302394799|gb|ADL33704.1| hypothetical protein bpr_I0962 [Butyrivibrio proteoclasticus B316]
          Length = 154

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 2/152 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELS 73
           +     +     +++ P+ E    R   +  ++E     L+ ++++ DG + + +C ++S
Sbjct: 1   MSKKDDIEKKTEALLTPIAEANGVRVYDVEYVKEAGEWYLRAYIDK-DGGVDINECVDVS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            A+S  LDV++ IE  Y LEVSSPG+ R + +   F    G  V  ++       ++  G
Sbjct: 60  HALSDALDVDDFIEEAYTLEVSSPGLGRQLKKDRHFANSIGQDVELKLFKPRDGVKEFAG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
            +    +T   +      E  + +    I   
Sbjct: 120 TLKSFDDTTVTVTINDIDETFIRKEISVIKLA 151


>gi|300312900|ref|YP_003776992.1| hypothetical protein Hsero_3606 [Herbaspirillum seropedicae SmR1]
 gi|300075685|gb|ADJ65084.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 164

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 71/164 (43%), Gaps = 17/164 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-------MTLRDCEELSQAI 76
            +  +I+  +  + +  V     +    L+++F++            +T+ DCE+ +  +
Sbjct: 2   QLLELIESTLSGLGYELV--EFEKAPRGLVRVFIDFPFDPEAEEARSITVEDCEKATHQL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIG 133
             +  VEN++  + RLEVSSPG+DRP+ + SDF+R+       ++ +       ++   G
Sbjct: 60  LHVFTVENVL--YERLEVSSPGLDRPLKKFSDFVRFVDCEAVIKLRVPLPGTSNRKTYEG 117

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            +         LE E     D +   +  +   +  A L+   +
Sbjct: 118 VLREPEGEELVLEFE---ANDGSAAVLNFTLADVDKAHLVPQVD 158


>gi|303248241|ref|ZP_07334504.1| protein of unknown function DUF150 [Desulfovibrio fructosovorans
           JJ]
 gi|302490379|gb|EFL50290.1| protein of unknown function DUF150 [Desulfovibrio fructosovorans
           JJ]
          Length = 180

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 13/178 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDG--------NMTLRDCEE 71
           +   I  +I P +         + L    +  L +++++  D          +T+ +C  
Sbjct: 7   VPEKIRELISPFLTAKGLAVWGVELAASGHRQLVRLYLDLADDVVRTPERRGVTIDECAT 66

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +  +L++E++  G Y LEVSSPG  R          + G  +  ++      +++ 
Sbjct: 67  VSRHLGTLLEMEDLFHGPYVLEVSSPGFGRRFFSADQLPAYIGEAIEAKLAAPRDGRKRF 126

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
            GK+     +   +      +       ++  FD     RLI   + +       G  
Sbjct: 127 RGKLSAVDGSRVTMTVNPGPQAFS----LSFEFDEADKVRLIHAFDAISEGEAADGDA 180


>gi|257453567|ref|ZP_05618857.1| hypothetical protein ENHAE0001_1621 [Enhydrobacter aerosaccus SK60]
 gi|257449025|gb|EEV23978.1| hypothetical protein ENHAE0001_1621 [Enhydrobacter aerosaccus SK60]
          Length = 169

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 14/162 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVER------DDGNMTLRDCEELSQA 75
            +++ +I+P +         I  + +    LL+I++E       +   +T+ DC  ++  
Sbjct: 8   AELTQIIEPAVTACDVSLWGIEFVPQGRRSLLRIYIEALPEDRAEGKQVTIEDCAAVTHQ 67

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS----GDKQKL 131
           +  +LD+ + I G Y LEVSSPG+DR          + G  ++  ++ +       ++K+
Sbjct: 68  VGGVLDLHDPIAGEYLLEVSSPGLDRAFFSAEQLHDYVGQTISLRLIHAIGQGSDKRRKV 127

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            G+++   E    ++ E      +N+  +AI  D++  A L+
Sbjct: 128 TGELVNIDERQLTVKTEND---QVNDQLLAIELDNIDKANLV 166


>gi|257463890|ref|ZP_05628276.1| putative cytoplasmic protein [Fusobacterium sp. D12]
 gi|317061419|ref|ZP_07925904.1| conserved hypothetical protein [Fusobacterium sp. D12]
 gi|313687095|gb|EFS23930.1| conserved hypothetical protein [Fusobacterium sp. D12]
          Length = 153

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             I  ++ P  E++    V +  +++     ++I+VE+ DG++ L DC  LS  I     
Sbjct: 6   QKIEKIVTPEAEKLGLSLVDVEYMQDGGYWYVRIYVEKLDGDVNLEDCANLSGNIED--A 63

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           V+ +I+  + LEVSSPGI+RP+ +++DF+R+ G  +   +     +K+ + G ++     
Sbjct: 64  VDQLIDKKFFLEVSSPGIERPLKKEADFIRFTGEKIFVALKHKIHEKRNVEGILLAYENQ 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
                       ++   ++ I F  +  + L+   +  
Sbjct: 124 T--------LLLEVEGEELQIPFSEVKKSHLVFDFDEF 153


>gi|330718232|ref|ZP_08312832.1| hypothetical protein LfalK3_02050 [Leuconostoc fallax KCTC 3537]
          Length = 158

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 14/164 (8%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQ 74
               +   ++ +++PVI+E       ++   E    +L+I +++ D   +T+ D  +L++
Sbjct: 1   MASKVEQTVAQLVKPVIDEHGDILWDLTFGNEGGQRVLRILIDKADHEFITMNDLTKLTE 60

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN--GHVVACEIVLSSGDKQK 130
            I+ +LD    + I G Y L++SSPG DRP+     +         +   + ++   ++K
Sbjct: 61  EINELLDNSEPDPIPGTYMLDISSPGADRPLKALWHYQWAQEADENILVSLFVAKNGRKK 120

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             GKI   ++    L  +           + ++F  +  A L V
Sbjct: 121 WQGKISEINDDAIVLITDDE--------TLTLAFSEIAKASLDV 156


>gi|171058382|ref|YP_001790731.1| hypothetical protein Lcho_1699 [Leptothrix cholodnii SP-6]
 gi|226736416|sp|B1XY65|RIMP_LEPCP RecName: Full=Ribosome maturation factor rimP
 gi|170775827|gb|ACB33966.1| protein of unknown function DUF150 [Leptothrix cholodnii SP-6]
          Length = 183

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 70/175 (40%), Gaps = 14/175 (8%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER---------DDGNMTLRDCEELSQAI 76
              ++  +  M +  V+         LL ++++R             + + DCE +++ +
Sbjct: 4   QQAVETTVTGMGYELVECERSARG--LLCVYIDRVPGSVYLTGPGEFVLVEDCELVTRQL 61

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             + +VEN+   + RLEVSSPG+DRP+ +  DFLR+ G  V   +      ++   G + 
Sbjct: 62  RYLFEVENV--DYSRLEVSSPGLDRPLRKVGDFLRFLGSDVDVTLKAPFQGRKNYRGLLR 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
                      E   +    +  +  + D +  ARL+   +          +  G
Sbjct: 120 QA-GDTPEQGFELVFQDGKEDKVLGFALDEVREARLVPVVDFKGRMRQTADAPQG 173


>gi|329919854|ref|ZP_08276792.1| hypothetical protein HMPREF9210_0185 [Lactobacillus iners SPIN
           1401G]
 gi|328936944|gb|EGG33374.1| hypothetical protein HMPREF9210_0185 [Lactobacillus iners SPIN
           1401G]
          Length = 158

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 7/152 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD
Sbjct: 6   DKVIEVITPLVHARGDELVDIEYVKENNQNYLRIYVDREPDGIDIDEIATLSESVSEQLD 65

Query: 82  --VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
               + +   Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++   
Sbjct: 66  LINPDPLPDPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                LE     +    + +I I  + + + R
Sbjct: 126 MDKIILEI----KIKTQQQKITIPRNMIANIR 153


>gi|312873335|ref|ZP_07733388.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d]
 gi|311091125|gb|EFQ49516.1| conserved hypothetical protein [Lactobacillus iners LEAF 2052A-d]
          Length = 158

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 7/152 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  VI P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD
Sbjct: 6   DKVIEVITPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLD 65

Query: 82  --VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
               + +   Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++   
Sbjct: 66  LINPDPLPDPYILELSSPGVERPIKTEADWCKAKDDYVHVGLYKKINGQKSYEGTLLDYD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                LE     +    + +I I  + + + R
Sbjct: 126 MDKIILEI----KIKTQQQKITIPRNMIANIR 153


>gi|227534930|ref|ZP_03964979.1| protein of hypothetical function DUF150 [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227187686|gb|EEI67753.1| protein of hypothetical function DUF150 [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 150

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL--D 81
           ++++++P++++  F    +  ++      L++++++  G +TL +C  +S+A+S  L   
Sbjct: 1   MTALVKPILDDHHFYLTDVEFVKEGGGWYLRVYIDK-TGGITLDECVMVSEALSEKLDAM 59

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I   Y LEVSSPG +RP+  ++D+ +  G  +   +      K+   G +      
Sbjct: 60  DPDPIPQQYFLEVSSPGAERPLKHETDYEQAVGDYIHVSLFKKLDGKKVFEGTLKELLPD 119

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
              L  + +  K        I    + SARL 
Sbjct: 120 QLTLTVKDKSRKFDQ----VIDRQLIASARLA 147


>gi|332799220|ref|YP_004460719.1| Ribosome maturation factor rimP [Tepidanaerobacter sp. Re1]
 gi|332696955|gb|AEE91412.1| Ribosome maturation factor rimP [Tepidanaerobacter sp. Re1]
          Length = 157

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 11/153 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             + ++    +E   F  + +  ++E  N  L+ ++++  G +T+ DC+ +S  +  +LD
Sbjct: 8   KKLWNLGYKAVEAAGFELIDMEFVKESGNWYLRYYIDKP-GGITIDDCQTVSVEVGRLLD 66

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           + ++I   Y LEVSSPG++RP+    DFLR+ G  V  +     GDK+   G +   S  
Sbjct: 67  IADLIPCSYILEVSSPGLERPIKTDKDFLRYIGSFVEIKTFEKIGDKKVFTGILEDYSNN 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++         N     I  + + SA+L  
Sbjct: 127 TVTVK---------NGECYLIPKEKISSAKLKF 150


>gi|260881110|ref|ZP_05403661.2| hypothetical protein MITSMUL_03619 [Mitsuokella multacida DSM
           20544]
 gi|260849563|gb|EEX69570.1| hypothetical protein MITSMUL_03619 [Mitsuokella multacida DSM
           20544]
          Length = 211

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 72/158 (45%), Gaps = 13/158 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   + +++Q ++++      V    ++E +  L++++++ +G + + DC+ LS+
Sbjct: 62  MAKQQVEDAVEAIVQELLKDQDVIELVDAEYVKEHDWYLRVYIDK-EGGIDIEDCQALSE 120

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +   LD  +++   Y LEVSSPGIDR + +  DF R  G  V   +      K+ ++G+
Sbjct: 121 KLEEALDKGDVVPDSYILEVSSPGIDRVLRKPRDFTREQGKKVDVTLYAPREGKKLVVGE 180

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G       L           + +  I    +   RL
Sbjct: 181 LTGFDGDAIEL-----------DGETKIPLADIAQVRL 207


>gi|260101366|ref|ZP_05751603.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|260084818|gb|EEW68938.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
          Length = 172

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  VI+ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S
Sbjct: 16  SKVVDLVRPVIETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVS 75

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +
Sbjct: 76  EKLDTIDPDPLPDPYVLELSSPGAERPITTEADWKRALNDYVHIGLYQKIDDKKVYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              +     LE + +        ++ I    +   R
Sbjct: 136 KYYNNDEIVLEVKDK----TRRKKLTIPRKLIAKIR 167


>gi|188577682|ref|YP_001914611.1| hypothetical protein PXO_01301 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188522134|gb|ACD60079.1| YhbC family protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 176

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 12/144 (8%)

Query: 38  FRSVQISLLEE-KNLLLQIFVE-----RDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
              + +  L       L+++++     + +  + + DCE +S+ +S  LDVE+ I GHY 
Sbjct: 1   MELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGHYT 60

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           LEVSSPG+DRP+     F R  G      + L+   +++  G+I+               
Sbjct: 61  LEVSSPGVDRPLFTLEQFARHAGESTKIVLKLAQDGRRRFQGEILRIDAEA------GAV 114

Query: 152 EKDMNELQIAISFDSLLSARLIVT 175
              ++   + I FD++  AR++  
Sbjct: 115 VFAIDGKDVQIGFDNIDKARILPD 138


>gi|329121256|ref|ZP_08249883.1| hypothetical protein HMPREF9083_0344 [Dialister micraerophilus DSM
           19965]
 gi|327470190|gb|EGF15653.1| hypothetical protein HMPREF9083_0344 [Dialister micraerophilus DSM
           19965]
          Length = 156

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 79/149 (53%), Gaps = 4/149 (2%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   + ++IQPV+E+     V +  + E+N +L+IF+++ DG + L DC+E+S +
Sbjct: 1   MSHKEIESAVEALIQPVLEKKGIEVVDVEYVRERNWILRIFIDK-DGGVDLNDCQEISVS 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLI 132
              ++D  ++I  +Y LEVSSPGIDR + +  DF+R+    V+ ++     +    ++  
Sbjct: 60  AGELIDKNDLISDNYMLEVSSPGIDRVLKKDKDFIRYKDSKVSVKLFAPVEELNLDKEFA 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIA 161
             + G       L  +   E  +++ +I+
Sbjct: 120 AILNGLVNDEISLILDDGREIFLSKKKIS 148


>gi|255019835|ref|ZP_05291911.1| transcription termination protein NusA-like protein
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970764|gb|EET28250.1| transcription termination protein NusA-like protein
           [Acidithiobacillus caldus ATCC 51756]
          Length = 176

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 9/156 (5%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           GL   +   I      M    V + LL   +++ LQ+F+E+D+G +T+ DC  +S+ +S 
Sbjct: 27  GLEERLLEGIAEQAAAMGCGVVDVRLLRVGRSVTLQVFIEKDEGAVTIEDCAAVSRQLSV 86

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDVEN I G YRLEVSSPG+DRP+ R++DF R+ G +   E+      +++  G+++  
Sbjct: 87  WLDVENPIAGAYRLEVSSPGLDRPLKREADFQRFVGALAEIELRGLRDGRRRWRGRLLLA 146

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           S     L+ +   +              +L A+L+ 
Sbjct: 147 SPGSVALDVDGVRQ--------EFLLAEILKAKLVP 174


>gi|172036757|ref|YP_001803258.1| hypothetical protein cce_1842 [Cyanothece sp. ATCC 51142]
 gi|259585745|sp|B1WZP0|RIMP_CYAA5 RecName: Full=Ribosome maturation factor rimP
 gi|171698211|gb|ACB51192.1| DUF150-containing protein [Cyanothece sp. ATCC 51142]
          Length = 151

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 9/154 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P++EEM    V++     ++  +L++ +     + +L DCE++S+A+  +
Sbjct: 5   LIPQIIDLATPIVEEMGLDVVEVVFQTNKRPPVLRVDIRNPASDTSLNDCEQVSRALEAV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+ G Y LE+SSPGI R +  + DF+ + G  V         DK++  G++ G  
Sbjct: 65  LDETAIMPGAYVLEISSPGISRYLNSERDFIAFKGFEVNIATNPPYKDKKEWRGRLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           E   +L ++ R         IAI    +   +L 
Sbjct: 125 EKAVYLNRKGRA--------IAIPCAVITKVQLA 150


>gi|170077375|ref|YP_001734013.1| hypothetical protein SYNPCC7002_A0752 [Synechococcus sp. PCC 7002]
 gi|169885044|gb|ACA98757.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 166

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I +  +P+  E+    V +     +K  +L+I V     +  L DCE  S+ + P 
Sbjct: 18  LIPRIVTCAEPIAAELGLEVVDVVFQTNKKPPVLRIDVRNLSQDTGLEDCERFSRLLDPQ 77

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+ + II G Y LEVSSPG DR +    +F+ + G  V  +      D+++  G +    
Sbjct: 78  LEAQEIIPGAYVLEVSSPGTDRNLTTDREFIAFRGFPVRVKTYAPYKDQKEWCGTLRERD 137

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    L  + +         IAI  + +   +L
Sbjct: 138 EAAIHLNLKGKA--------IAIPRELVAKVQL 162


>gi|328953956|ref|YP_004371290.1| Ribosome maturation factor rimP [Desulfobacca acetoxidans DSM
           11109]
 gi|328454280|gb|AEB10109.1| Ribosome maturation factor rimP [Desulfobacca acetoxidans DSM
           11109]
          Length = 153

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 10/158 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                + G ++ +I PV++      V+   +      +L++F+++  G ++L DC  LS 
Sbjct: 1   MQPDDVTGRVTELILPVLQAHDVELVETEFVRAGRRYILRLFLDKP-GGISLEDCAYLSN 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +  ++DV ++I   Y LEVSSPG+ RP+ +  DF R+ G +V   +    G +    G+
Sbjct: 60  LLGELIDVHDVIRHAYILEVSSPGLTRPIKKIEDFSRYAGRLVRITVRGGVGKRSLYRGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ++G       +               AI    +  ARL
Sbjct: 120 LLGLDGETVKV--------KEGSRVYAIPVKDIARARL 149


>gi|238852617|ref|ZP_04643027.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
 gi|282850816|ref|ZP_06260190.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
 gi|311110886|ref|ZP_07712283.1| SP14.3 protein [Lactobacillus gasseri MV-22]
 gi|259585807|sp|Q044C1|RIMP_LACGA RecName: Full=Ribosome maturation factor rimP
 gi|238834763|gb|EEQ26990.1| conserved hypothetical protein [Lactobacillus gasseri 202-4]
 gi|282557768|gb|EFB63356.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
 gi|311066040|gb|EFQ46380.1| SP14.3 protein [Lactobacillus gasseri MV-22]
          Length = 158

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 2   TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 61

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 62  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTYEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE     +      +I I    + S+R
Sbjct: 122 KDLNQNQIVLEV----KIKTRRKEITIPRKVIASSR 153


>gi|313124032|ref|YP_004034291.1| ribosome maturation factor rimp [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280595|gb|ADQ61314.1| Ribosome maturation factor rimP [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 158

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 7/150 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAISPIL--D 81
           I   I+PVI       V +  ++EK+   L+I+V++    + +    ELS+ +   L   
Sbjct: 8   ILEAIEPVIIGHDCELVDLEYVKEKSQYYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +   +      ++   G ++   + 
Sbjct: 68  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYIHVGLYQKLEGEKVFEGHLLDLDDQ 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              LE     +      Q+ I    + SAR
Sbjct: 128 EIKLEI----KIKTRRKQLTIPRKQIASAR 153


>gi|297617184|ref|YP_003702343.1| hypothetical protein Slip_0999 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145021|gb|ADI01778.1| protein of unknown function DUF150 [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 153

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
               G+   +  +I+  +E +    V +    +    +LQ+F+++  G + L  C++ S+
Sbjct: 1   MKSKGVVERVEPIIERELEPVGIDVVDVQYKNQAGRWVLQVFIDKP-GGVDLDTCQQASE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I   LD E+ I   Y LEVSSPG+DR + +  DF R+ G  V  ++     +++   G 
Sbjct: 60  IIGRALDWEDPIPHSYVLEVSSPGLDRVLKKDKDFERFTGKKVTVKVREPINNQKNFKGL 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ++G  +    ++          +  + +     L  RL+
Sbjct: 120 LLGLRDGKIMVDL--------GDRILEVPRTEALQVRLV 150


>gi|325677900|ref|ZP_08157542.1| hypothetical protein CUS_7307 [Ruminococcus albus 8]
 gi|324110454|gb|EGC04628.1| hypothetical protein CUS_7307 [Ruminococcus albus 8]
          Length = 183

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 62/157 (39%), Gaps = 3/157 (1%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAI 76
                  ++ + QP+ +E+      +   +      L++ +++ DG +T+ DCE  ++  
Sbjct: 12  KKNTVERVTELAQPLADELGLFLWDVRFEKEGATWYLRVLIDK-DGGVTMEDCENFTRPF 70

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKI 135
           + ILD E+ I   Y  E  SPG+ R + +   F    G  V   ++      +++ I  +
Sbjct: 71  NKILDDEDPIAQSYVFECGSPGLGRELRKPIHFEVCIGDAVRVRLIRPDENGEREFIVGL 130

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +G  +    +  +   E       +          +L
Sbjct: 131 VGYDDEEKVIACQTLDENGDGVENVQFRLSDCAFVKL 167


>gi|302342323|ref|YP_003806852.1| hypothetical protein Deba_0888 [Desulfarculus baarsii DSM 2075]
 gi|301638936|gb|ADK84258.1| protein of unknown function DUF150 [Desulfarculus baarsii DSM 2075]
          Length = 161

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 11/157 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +I+PV+       V++    E    +L++FV+R  G +TL DC  +S+ +S +
Sbjct: 12  LGRRLMELIEPVVRSEGLVLVELQWRPENAGQVLRLFVDRPAGGVTLDDCSLISRQVSDL 71

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG--DKQKLIGKIMG 137
           LDVE+ I G YRLEVSSPG++R +    +++ + G +    I         + L G+++G
Sbjct: 72  LDVEDPIGGAYRLEVSSPGLERRLKSAREYVIFAGRMAKLVIRDDGEKSGNRVLHGRLLG 131

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + R                ++ A L+V
Sbjct: 132 LQGDDVLIEIDGRPTAT--------PLAQVVKANLMV 160


>gi|329667118|gb|AEB93066.1| hypothetical protein LJP_0738 [Lactobacillus johnsonii DPC 6026]
          Length = 158

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 2   TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 61

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 62  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTFEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE     +      +I I    + S+R
Sbjct: 122 KDLNQDQIVLEV----KIKTRRKEITIPRKVIASSR 153


>gi|300812571|ref|ZP_07092988.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496444|gb|EFK31549.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 158

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 7/150 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL--D 81
           I   I+PVI       V +  ++EK+   L+I+V++    + +    ELS+ +   L   
Sbjct: 8   IQEAIEPVIIGHDCELVDLEYVKEKSQDYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +   +      ++   G ++   + 
Sbjct: 68  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYIHVGLYQKLEGEKVFEGHLLDLDDQ 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              LE     +      Q+ I    + SAR
Sbjct: 128 EIKLEI----KIKTRRKQLTIPRKQIASAR 153


>gi|189485236|ref|YP_001956177.1| hypothetical protein TGRD_233 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|259645130|sp|B1GZN4|RIMP_UNCTG RecName: Full=Ribosome maturation factor rimP
 gi|170287195|dbj|BAG13716.1| conserved hypothetical protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 151

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 65/155 (41%), Gaps = 9/155 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M    +I  ++ PV        V +   ++  + + +IF+++ D  +T+ DCE +S    
Sbjct: 1   MRKVQEIEDLLAPVAAREKIEIVDVQYSKKAGDWVARIFIDK-DSGVTISDCENISCIFG 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  +I++  Y LE+SSPG  R +  +  F R+ G            +++  +G ++ 
Sbjct: 60  AFLDESDILKDSYVLEISSPGFKRVLKSEKSFRRFIGSKTRIRTFKPINNQRNFLGTLLN 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +    +         +    + I F  +  A +
Sbjct: 120 FDDGRIKIND-------VTNGVVEIEFSDIRKANI 147


>gi|42523052|ref|NP_968432.1| hypothetical protein Bd1545 [Bdellovibrio bacteriovorus HD100]
 gi|51316637|sp|Q6MMS8|RIMP_BDEBA RecName: Full=Ribosome maturation factor rimP
 gi|39575257|emb|CAE79425.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 174

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 10/160 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN-MTLRDCEELSQAISPIL 80
             +  +   V          I  +   K   L++F++R++   +++ DC  +S+ +S IL
Sbjct: 9   AKVEKIANDVAAAQGCVLYDIEFVGLGKGRTLRLFIDREEEGAISIEDCTNVSRGLSEIL 68

Query: 81  D--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG----DKQKLIGK 134
           D   E I  G Y LEVS+PG+DR + +   F +  G  V  +   +      + +K    
Sbjct: 69  DADEEMIPGGEYNLEVSTPGLDRHLKKPWHFKKAIGKKVYIKTTKALESVGVEDKKWK-- 126

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              T E       E+     + +++I I +  +  A+L+ 
Sbjct: 127 NAKTVEEVLESADEQGVRFVVKDVEIKIPYAMIDRAKLVF 166


>gi|160932905|ref|ZP_02080294.1| hypothetical protein CLOLEP_01746 [Clostridium leptum DSM 753]
 gi|156867979|gb|EDO61351.1| hypothetical protein CLOLEP_01746 [Clostridium leptum DSM 753]
          Length = 167

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 3/145 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
           G    +  + +P++++       +  L+E     L+++++R +  +T+ DCE +S+AI  
Sbjct: 9   GTVEAVWDLCEPIVKDFGLELWDVRYLKEGAQWYLRVYIDRQE-GVTIEDCENVSRAIDE 67

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMG 137
            LD  + ++  Y LEV SPG++R +VR   F R+ G  V  +++      +++  G +  
Sbjct: 68  PLDRLDPVDQSYCLEVCSPGLERELVRPEHFQRFEGWPVMVKLIRPLDSGEREFNGVLGT 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAI 162
                F L   +     + +     
Sbjct: 128 YENGVFDLWVNETDVISLAKKDTVF 152


>gi|295102729|emb|CBL00274.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
           prausnitzii L2-6]
          Length = 161

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  + ++++PV+E M  R   +   +E     L++ ++R DG M    C E+S A+ PIL
Sbjct: 10  AQRVEALVRPVVEGMGLRLWDVVFEKEGPDWYLRVLIDR-DGTMDTDTCAEVSHALDPIL 68

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-GDKQKLIGKIMGTS 139
           D  + I+  Y LEV SPG+ R + R   +    G  +  +++  +    ++  G + G  
Sbjct: 69  DEADPIDQSYYLEVGSPGLGRKLTRPEHYEALKGEKIGVKLIRPTADGVREFAGILKGRE 128

Query: 140 ETGFFLEKEK 149
            +   +E E 
Sbjct: 129 GSTVTVETEN 138


>gi|322391411|ref|ZP_08064881.1| essential protein [Streptococcus peroris ATCC 700780]
 gi|321145837|gb|EFX41228.1| essential protein [Streptococcus peroris ATCC 700780]
          Length = 207

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 55  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 112

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 113 LDTIKPDPFPEQYFLEITSPGLERPLKTKEAVAGAVGKYIHVGLYQAIDKQKVFEGTLLS 172

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I ++ +  ARL V
Sbjct: 173 FEEDELTMEYMDKTRKK----TVQIPYNLVSKARLAV 205


>gi|260495124|ref|ZP_05815253.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
 gi|260197567|gb|EEW95085.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
          Length = 156

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I+ ++ P +EEM+   V +  ++      ++IF+E  +G++++ DC +LS  I   
Sbjct: 7   IVEKITEIVNPFVEEMNLSLVDVEYVQDGAYWYIRIFIENLNGDLSIEDCSKLSSKIEDK 66

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +  E +IE  + LEVSSPG++RP+ +  D++R+ G  +   +     DK++    I   +
Sbjct: 67  I--EKLIEHKFFLEVSSPGLERPLKKIEDYIRFTGEKITLHLKHKLDDKKQFKAIIKEVN 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   +K+        +I I F+ +    ++ 
Sbjct: 125 GDNIIFLIDKK--------EIEIKFNEIRKTNILF 151


>gi|326692689|ref|ZP_08229694.1| hypothetical protein LargK3_02896 [Leuconostoc argentinum KCTC
           3773]
          Length = 158

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 75/162 (46%), Gaps = 14/162 (8%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQ 74
               +  +I+++I P++ E +     ++  +E    +L+I V++ D   +T+ D  + +Q
Sbjct: 1   MANKVEQEITALITPILVEQNDLLWDLTYTKEGGQKVLRIMVDKPDHTFITMADITDFTQ 60

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN--GHVVACEIVLSSGDKQK 130
           A++ +LD    + I   Y L++SSPG DRP+ +   +         +   +  +   ++K
Sbjct: 61  AVNDLLDTVEPDPIPEAYLLDISSPGADRPLKQPWHYKWAQEADETILVALFAAKDGQKK 120

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             GK+   ++ G  L           +  +++ FD +  A L
Sbjct: 121 WQGKVKSVTDDGIVL--------STAQGDLSLQFDEIAKAVL 154


>gi|313888257|ref|ZP_07821928.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845660|gb|EFR33050.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 153

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 10/157 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  +I  + + V EE+ +  V I      K+ LL IF+ + +  + L DC ++S+
Sbjct: 1   MNKKELKKEIYPLAEEVAEELGYEIVDIEFQNGSKHDLLSIFIYKKE-GIDLNDCTDMSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           ++   LD   I++  Y LE+SSPG+DRP+  K D+ R  G+ V  ++      K++    
Sbjct: 60  SLEKKLDNLEILKNPYYLEISSPGLDRPLKTKDDYRRNIGNEVDVKLYAPIDGKKEFSFV 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +    +   +   + +        + AI   S+ S +
Sbjct: 120 LDKYDDENVYCTLDGK--------EFAIPIKSISSMK 148


>gi|160892798|ref|ZP_02073588.1| hypothetical protein CLOL250_00329 [Clostridium sp. L2-50]
 gi|156865839|gb|EDO59270.1| hypothetical protein CLOL250_00329 [Clostridium sp. L2-50]
          Length = 142

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 77/148 (52%), Gaps = 9/148 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           ++ P+IE  +   V +  ++   +  L+I+ ++ +G +T+ DCE +++A+S +LD ++ I
Sbjct: 1   MVLPIIEANNLELVDVEYVKEGSDYYLRIYADK-EGGITIGDCEIVNRAMSDLLDADDFI 59

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           +  Y LEVSSPG+ RP+ +++DF R  G +V  +      + +   G++    E    + 
Sbjct: 60  KDAYILEVSSPGLTRPLKKENDFKRSIGKIVEIKTYTKIDNCKDFEGELTAYDEETVTIL 119

Query: 147 KEKRGEKDMNELQIAISFDSLLSARLIV 174
            E        E ++ I+   +   RL  
Sbjct: 120 TED-------EKELKIARKDISMIRLAF 140


>gi|182683485|ref|YP_001835232.1| hypothetical protein SPCG_0515 [Streptococcus pneumoniae CGSP14]
 gi|225858390|ref|YP_002739900.1| hypothetical protein SP70585_0612 [Streptococcus pneumoniae 70585]
 gi|182628819|gb|ACB89767.1| hypothetical protein SPCG_0515 [Streptococcus pneumoniae CGSP14]
 gi|225720853|gb|ACO16707.1| conserved hypothetical protein [Streptococcus pneumoniae 70585]
          Length = 183

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 31  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEMISPV 88

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 89  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 148

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 149 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 181


>gi|104774215|ref|YP_619195.1| hypothetical protein Ldb1336 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514303|ref|YP_813209.1| hypothetical protein LBUL_1245 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122274965|sp|Q049V1|RIMP_LACDB RecName: Full=Ribosome maturation factor rimP
 gi|122397110|sp|Q1G9P5|RIMP_LACDA RecName: Full=Ribosome maturation factor rimP
 gi|103423296|emb|CAI98137.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093618|gb|ABJ58771.1| hypothetical protein LBUL_1245 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 158

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 7/150 (4%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL--D 81
           I   I+PVI       V +  ++EK+   L+I+V++    + +    ELS+ +   L   
Sbjct: 8   ILEAIEPVIIGHDCELVDLEYVKEKSQDYLRIYVDKQPNGIDIETIAELSELVGEKLDSM 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + +   Y LE+SSPG++RP+ ++ D+ +  G  +   +      ++   G ++   + 
Sbjct: 68  QPDPLPDPYILELSSPGLERPIKKEQDWEKAKGQYIHVGLYQKLEGEKVFEGHLLDLDDQ 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              LE     +      Q+ I    + SAR
Sbjct: 128 EIKLEI----KIKTRRKQLTIPRKQIASAR 153


>gi|67923758|ref|ZP_00517222.1| Protein of unknown function DUF150 [Crocosphaera watsonii WH 8501]
 gi|67854385|gb|EAM49680.1| Protein of unknown function DUF150 [Crocosphaera watsonii WH 8501]
          Length = 151

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+ +EM    V +     ++  +L++ +    G+ +L DCE++S+A+  I
Sbjct: 5   LIPQIIDLATPIAQEMGLEIVDVVFQTNKRPPVLRVDIRNTIGDTSLNDCEKVSRALESI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+ G Y LE+SSPGI R +  + DF+ + G  V         DK++  G++ G  
Sbjct: 65  LDERAIMPGAYVLEISSPGISRYLSSERDFIAFKGFEVKVTTNPPYMDKKEWQGRLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           E   +L ++ R       +   +    
Sbjct: 125 EKAVYLNRKGRAIAVPCSVITQVQLAD 151


>gi|291541941|emb|CBL15051.1| Uncharacterized protein conserved in bacteria [Ruminococcus bromii
           L2-63]
          Length = 159

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 72/151 (47%), Gaps = 9/151 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            +  + QP++E        +  ++   +  L++++++ +  + + DCE +S+AI+  LD 
Sbjct: 12  KVWELCQPIVEGFGLSLWDVRYVKEGADRFLRVYIDKPE-GIDINDCENVSRAINGPLDE 70

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-KQKLIGKIMGTSET 141
            + IE  Y LEV SPGI+R ++R   F+++ G  +  +++       ++  G +   S+ 
Sbjct: 71  LDPIEEAYCLEVCSPGIERELIRDEHFMQFIGADIMVKMLRPIDGIGREFKGVLKDYSDG 130

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +E          E +I IS       +L
Sbjct: 131 KVTIED------HSGENEITISKKDAAWIKL 155


>gi|322387177|ref|ZP_08060787.1| hypothetical protein HMPREF9423_0185 [Streptococcus infantis ATCC
           700779]
 gi|321141706|gb|EFX37201.1| hypothetical protein HMPREF9423_0185 [Streptococcus infantis ATCC
           700779]
          Length = 183

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 31  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 88

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 89  LDTIKPDPFPEQYFLEITSPGLERPLKTKEAVAGAVGKYIHVGLYQAIDKQKVFEGTLLS 148

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I ++ +  ARL V
Sbjct: 149 FEEDELTMEYMDKTRKK----TVRIPYNLVSKARLAV 181


>gi|259585815|sp|A4G7S9|RIMP_HERAR RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISP 78
            +S++I+  +  M +  V     +    L++++++      D G++T+ DCE+++  +  
Sbjct: 2   QLSALIEKTVVGMGYELVNFE--QAARGLVRVYIDFTPEDADKGSITVEDCEKVTHQLLH 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---DKQKLIGKI 135
           +L VEN    + RLEVSSPG+DRP+ + SD++R+ G     ++ L      +++   G +
Sbjct: 60  VLTVENA--NYERLEVSSPGLDRPLKKLSDYVRFAGAEALVKLRLPMPNAANRKSFQGIL 117

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    LE E     +    ++  +   +  A L+ 
Sbjct: 118 QEPVGETLALEFEG----NEGPAKLEFTLADVDKAHLVP 152


>gi|218439320|ref|YP_002377649.1| hypothetical protein PCC7424_2360 [Cyanothece sp. PCC 7424]
 gi|226701263|sp|B7KIU5|RIMP_CYAP7 RecName: Full=Ribosome maturation factor rimP
 gi|218172048|gb|ACK70781.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7424]
          Length = 155

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+ E++    V++     ++  +L++ +     +  L DCE++S+++   
Sbjct: 5   LIPQIIDLATPIAEKLGLEIVEVVFQTNKRPPVLRLDIRNLSSDTGLDDCEQMSRSLEAT 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   +I G Y LE+SSPGI R +    +F+ + G  V  +      ++++  G + G  
Sbjct: 65  LDATELIPGSYVLEISSPGISRQLTSDREFIAFKGFEVIVKTYTPYENQKEWRGNLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L K+ R         IAI    +   +L
Sbjct: 125 EQAVYLNKKGRA--------IAIPRQLVAKVQL 149


>gi|259585811|sp|A6T0Z0|RIMP_JANMA RecName: Full=Ribosome maturation factor rimP
          Length = 161

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 16/159 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISP 78
            +S++I+  +  M +  V     +    L+++F++      D G +T+ DCE+++  +  
Sbjct: 2   QLSALIEKTVVGMGYELVNFE--QAARGLVRVFIDFTPEDADKGAITVEDCEKVTHQLLH 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---DKQKLIGKI 135
           +L VEN    + RLEVSSPG+DRP+ + SD++R+ G     ++ +      +++   G +
Sbjct: 60  VLTVENA--NYERLEVSSPGLDRPLKKLSDYVRFAGAEALVKLRMPMPNAANRKSFQGIL 117

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    LE E          ++  +   +  A L+ 
Sbjct: 118 QEPVGETLALEFEGND----GPAKLEFTLADVDKAHLVP 152


>gi|307243344|ref|ZP_07525508.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306493291|gb|EFM65280.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 155

 Score =  102 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 7/159 (4%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               +A  +   IQP +E   +  V +  ++E     L++ ++  +  + L +CE++S+ 
Sbjct: 1   MKKNIAQRVEEKIQPSVEGFGYELVDVEYVKEAGVYYLRVIIDH-ENGIGLDECEKVSRE 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I+PILD E+ IE +Y LEV SPGIDR + R  +F ++ G  V  ++  +  D +      
Sbjct: 60  INPILDEEDYIEDNYFLEVCSPGIDRVLKRDKEFSKYAGKTVEVKLYKNDQDLKTKQ--- 116

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    L+++      + + +       +   RL V
Sbjct: 117 --FEAELRGLDQDGMVVVSIGDTEKKFDRKEIAQIRLAV 153


>gi|42519363|ref|NP_965293.1| hypothetical protein LJ1491 [Lactobacillus johnsonii NCC 533]
 gi|51316714|sp|Q74IS4|RIMP_LACJO RecName: Full=Ribosome maturation factor rimP
 gi|41583651|gb|AAS09259.1| hypothetical protein LJ_1491 [Lactobacillus johnsonii NCC 533]
          Length = 158

 Score =  102 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R  G + + +   LS+ +S
Sbjct: 2   TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPGGIDIEEIANLSELVS 61

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 62  EKLDELDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTFEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE     +       I I    + S+R
Sbjct: 122 KDLNQDQIVLEV----KIKTRRKDITIPRKVIASSR 153


>gi|317051741|ref|YP_004112857.1| hypothetical protein Selin_1571 [Desulfurispirillum indicum S5]
 gi|316946825|gb|ADU66301.1| protein of unknown function DUF150 [Desulfurispirillum indicum S5]
          Length = 155

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 81/157 (51%), Gaps = 7/157 (4%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +S ++QP+++E++     + L+     +L++++++ +G ++L +CE +S  
Sbjct: 1   MDKERILRGVSELLQPIVQELALELFDVELINASGWILRVYLDK-EGGVSLDECERVSIE 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  +LDVE+II   Y LEVSSPG++R +  ++DF ++ G +          + +  IG +
Sbjct: 60  LGTLLDVEDIIGFRYTLEVSSPGVNRKLRHRADFEKYLGRLARIRTSEVLLNTKLHIGYL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              S+T   + ++ RG        I +    +  A L
Sbjct: 120 ADISDTELTIREKDRGIL------IPVPLAIIEKANL 150


>gi|312143667|ref|YP_003995113.1| protein of unknown function DUF150 [Halanaerobium sp.
           'sapolanicus']
 gi|311904318|gb|ADQ14759.1| protein of unknown function DUF150 [Halanaerobium sp.
           'sapolanicus']
          Length = 156

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +A  ++  + P+    +   V +  L+   + +L++F+E  +G +T+ +CE +S+A+S 
Sbjct: 6   KVADLVTEFVLPIAHNENLNLVDVEFLKEGSDWILRVFLENKEGELTIEECERVSRALSV 65

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           ILD E+ I+  Y LEVSSPG++RP+  + DF R+ G +++ +       +++ IG +   
Sbjct: 66  ILDEEDPIDKSYILEVSSPGLERPLKTEEDFERFQGELISVKTFKKIDGQKEFIGILKAY 125

Query: 139 SETGFFLEKEKRGEKDMNELQIA 161
           +     ++     E D+++  IA
Sbjct: 126 NNGQIKIDLRNGKEIDLDDNIIA 148


>gi|150021291|ref|YP_001306645.1| hypothetical protein Tmel_1413 [Thermosipho melanesiensis BI429]
 gi|259645126|sp|A6LMV9|RIMP_THEM4 RecName: Full=Ribosome maturation factor rimP
 gi|149793812|gb|ABR31260.1| protein of unknown function DUF150 [Thermosipho melanesiensis
           BI429]
          Length = 147

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 14/155 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  + Q + EE       +    +     L+I ++     ++ +DCE +S+ + 
Sbjct: 2   KDIVSQVKDIAQKICEEFHLELFDVKYYNKSGRWFLEIIIDNPYDYISTKDCENVSRKLE 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  NII   Y L VSSPG++RP+    DF R+ G     +   +       IG I  
Sbjct: 62  FELDKINIIPNKYYLTVSSPGLNRPLRNVKDFERFTGKKAKIKTREN-----TYIGYIKN 116

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +     E + +         I   F+ +  A L
Sbjct: 117 VVDNIITFETDGKF--------IEFKFEEIKKANL 143


>gi|169350437|ref|ZP_02867375.1| hypothetical protein CLOSPI_01205 [Clostridium spiroforme DSM 1552]
 gi|169292757|gb|EDS74890.1| hypothetical protein CLOSPI_01205 [Clostridium spiroforme DSM 1552]
          Length = 155

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I  +I+P+++        I  +++K    L+IFVE+++G + +  C  +S+ IS
Sbjct: 1   MELLNKIKEMIEPILQSNDVYLDDIEYVQDKGEWYLRIFVEKNEGFLDMDTCVAVSEQIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I+G Y LEVSSPG+++P+          G  V  +         ++ G I  
Sbjct: 61  QKLDEEDPIKGEYYLEVSSPGVEKPLKTFEQVKSSIGKYVYAKFYNPIAGLDEVEGFINS 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E   +  K   +++    ++++   RL V
Sbjct: 121 IEDETIEFEYLVKNIKKKVKIE----YNNIKFIRLAV 153


>gi|269215360|ref|ZP_06159214.1| hypothetical protein HMPREF0762_00005 [Slackia exigua ATCC 700122]
 gi|269131216|gb|EEZ62290.1| hypothetical protein HMPREF0762_00005 [Slackia exigua ATCC 700122]
          Length = 157

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 8/152 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + + ++P   E     V I ++   K   ++++++  +  +   D       I+ IL
Sbjct: 6   EASLLAALEPRAIEEGIEIVTIEVVGSRKAPTIRVYIDT-EQGIVFDDIAAAQAWINEIL 64

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  +   G Y LEVSSPGIDRP+  +  F    G  V          + +  G ++G +E
Sbjct: 65  DEIDPFPGAYTLEVSSPGIDRPLRTRGHFEAAVGEQVYATCSEPVDGRSRFSGTLLGVAE 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  +         ++  ++ + F  +  A +
Sbjct: 125 DGGAIRL------SVDGDEVVLPFSIIKRAHI 150


>gi|237739229|ref|ZP_04569710.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
 gi|229422837|gb|EEO37884.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
          Length = 156

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 11/158 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P +EEM+   V +  L++     +++F+E  +G++++ DC +LS  I
Sbjct: 4   NSQIIEKITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRVFIENLNGDLSIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++R + +  D++R+ G  +   +     DK++    I 
Sbjct: 64  ED--KVEELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKLNDKKQFKAVIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                      +K+        ++ I F  +  A ++ 
Sbjct: 122 EVKGDNIVFLIDKK--------EVEIEFKEIRKANILF 151


>gi|157363141|ref|YP_001469908.1| hypothetical protein Tlet_0274 [Thermotoga lettingae TMO]
 gi|166988603|sp|A8F3W0|RIMP_THELT RecName: Full=Ribosome maturation factor rimP
 gi|157313745|gb|ABV32844.1| protein of unknown function DUF150 [Thermotoga lettingae TMO]
          Length = 152

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 12/159 (7%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELS 73
           +     +   +  V+  ++ ++      I+L  E+   +L++ ++  +  +++R CE +S
Sbjct: 1   MILVKKIIDKLRPVVIDILSQLGLELFDITLRRERRKLVLRVVIDDPENYVSIRQCEIVS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             I   LD  ++I+  Y LEVSSPG+DRP+    D+ R+ G +    +       + L+G
Sbjct: 61  SQIGNYLDEADLIDSSYILEVSSPGLDRPLREMKDYNRFVGRLAKIWLKDG----KVLVG 116

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            I  T+E    +E +           I  SFD +   +L
Sbjct: 117 NIKETTENTVSIELKN-------GEIITFSFDQIKKGKL 148


>gi|259645133|sp|B1XI06|RIMP_SYNP2 RecName: Full=Ribosome maturation factor rimP
          Length = 153

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I +  +P+  E+    V +     +K  +L+I V     +  L DCE  S+ + P 
Sbjct: 5   LIPRIVTCAEPIAAELGLEVVDVVFQTNKKPPVLRIDVRNLSQDTGLEDCERFSRLLDPQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+ + II G Y LEVSSPG DR +    +F+ + G  V  +      D+++  G +    
Sbjct: 65  LEAQEIIPGAYVLEVSSPGTDRNLTTDREFIAFRGFPVRVKTYAPYKDQKEWCGTLRERD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    L  + +         IAI  + +   +L
Sbjct: 125 EAAIHLNLKGKA--------IAIPRELVAKVQL 149


>gi|268319260|ref|YP_003292916.1| hypothetical protein FI9785_775 [Lactobacillus johnsonii FI9785]
 gi|262397635|emb|CAX66649.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 158

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ V+ P+ E      V +  ++EK    L+I+V+R    + + +   LS+ +S
Sbjct: 2   TKVTELVADVVTPLAEARGDELVDVEYVKEKKQYYLRIYVDRRPVGIDIEEIANLSELVS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ R  G  +   +      ++   G +
Sbjct: 62  EKLDKLDPDPFPEPYILELSSPGLERPIKNEKDWERAKGSYIHVSLYQKIDGEKTFEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE     +       I I    + S+R
Sbjct: 122 KDLNQDQIVLEV----KIKTRRKDITIPRKVIASSR 153


>gi|320530107|ref|ZP_08031177.1| hypothetical protein HMPREF9555_01262 [Selenomonas artemidis F0399]
 gi|320137540|gb|EFW29452.1| hypothetical protein HMPREF9555_01262 [Selenomonas artemidis F0399]
          Length = 149

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)

Query: 17  GDMGLAGDISSVIQPVI-EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  +++ ++  +     V +  + E++  L++++++ +G + + DC  LS+ 
Sbjct: 1   MSAKIEERVEEIVRDLLPVQPELELVDVEYVRERDWYLRVYIDK-EGGIDIEDCRMLSEH 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  +LD E+ I   Y LEVSSPG+DR + +  DF R +G  V   +      K+ L G +
Sbjct: 60  LEEVLDREDFISDAYILEVSSPGLDRVLRKARDFEREHGKRVDVALYAPLDGKKNLTGAL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G       L+ +           + I  + +   RL
Sbjct: 120 TGYDGNVLILDDD-----------VRIPMEQVSQVRL 145


>gi|323466336|gb|ADX70023.1| Ribosome maturation factor rimP [Lactobacillus helveticus H10]
          Length = 172

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +      V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S
Sbjct: 16  SKVVDLARPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVS 75

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +
Sbjct: 76  EKLDTIDPDPLPDPYVLELSSPGAERPIKTEADWKRALNDYVHIGLYQKIDDKKVYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              +     LE + +        ++ I    +   R
Sbjct: 136 KYYNNDEIVLEVKDK----TRRKKLTIPRKLIAKIR 167


>gi|331265776|ref|YP_004325406.1| hypothetical protein SOR_0379 [Streptococcus oralis Uo5]
 gi|326682448|emb|CBZ00065.1| conserved hypothetical protein [Streptococcus oralis Uo5]
          Length = 175

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 80

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E   +  K      + I +  +  ARL V
Sbjct: 141 FEGDELTMEYMNKTRKK----TVQIPYSLVSKARLAV 173


>gi|294783787|ref|ZP_06749111.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480665|gb|EFG28442.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
          Length = 156

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P +EEM+   V +  L++     ++IF+E  +G +++ DC +LS  I
Sbjct: 4   NSQIIEKITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRIFIENLNGELSIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++R + +  D++R+ G  +   +     DK++    I 
Sbjct: 64  ED--KVEELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKLNDKKQFKAVIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                      +K+        ++ I F  +  A ++ 
Sbjct: 122 EVKGDNIVFLIDKK--------EVEIEFKEIRKANILF 151


>gi|329915248|ref|ZP_08276236.1| clustered with transcription termination protein NusA
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327544953|gb|EGF30294.1| clustered with transcription termination protein NusA
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 161

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 16/159 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-----MTLRDCEELSQAISP 78
            +  +I+  +  M +  V     +    LL+++++          +T+ DCE+++  +  
Sbjct: 2   QLLELIEKTVVGMEYELVDFE--QAARGLLRVYIDFPPEQAERGMITVEDCEKVTHQLLH 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIGKI 135
           +L VEN +  + RLEVSSPG+DRP+ + +D+LR+ G     ++ +       ++   G +
Sbjct: 60  VLTVENAV--YERLEVSSPGLDRPLKKLADYLRFAGMEAIVKLRMPMPGAANRKSFQGIL 117

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    LE E +         +  +   +  A L+ 
Sbjct: 118 HAPEGDQIKLEFEGKE----GSAMLEFTLADVDKAHLVP 152


>gi|261367203|ref|ZP_05980086.1| hypothetical protein SUBVAR_05255 [Subdoligranulum variabile DSM
           15176]
 gi|282570801|gb|EFB76336.1| hypothetical protein SUBVAR_05255 [Subdoligranulum variabile DSM
           15176]
          Length = 163

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 10/162 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISP 78
           G A  + ++++P +E M  R   +   +E     L++ ++RD+  +    CE +S+AI P
Sbjct: 9   GAAKTVETLVRPTVEGMGLRLWDVRFEKEGPDWFLRVLIDRDE-PLDTDTCEAVSRAIDP 67

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMG 137
           ILD  + I+  Y LEV SPG+ R + R   +    G   A  ++      ++ + G + G
Sbjct: 68  ILDEADPIDQSYYLEVGSPGLGRRLTRPEHYEALRGQKCAAHLIRPDEAGRRDVAGILQG 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
               G     +        E        +    +L   ++L 
Sbjct: 128 LDGEGNVTLVDG-------EETYTFPVKAAGYVKLCDDEDLF 162


>gi|169824467|ref|YP_001692078.1| hypothetical protein FMG_0770 [Finegoldia magna ATCC 29328]
 gi|303233823|ref|ZP_07320477.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
 gi|226708072|sp|B0S1E8|RIMP_FINM2 RecName: Full=Ribosome maturation factor rimP
 gi|167831272|dbj|BAG08188.1| conserved hypothetical protein associated with Nus operon
           [Finegoldia magna ATCC 29328]
 gi|302495257|gb|EFL55009.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
          Length = 154

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                L   +++ + P+I++       +         +L  ++E+DDG +++ DCE ++ 
Sbjct: 1   MNKKYLRDLMNNDLSPLIKDTGIEFYDVEYSNNNGKNILTFYIEKDDGLISIDDCELINN 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS  LD  + I   Y LE++S  I  P  R  DF +  G+VV   +      K++  G 
Sbjct: 61  KISDKLDEIDPISDPYYLEIASVDITTPFTRDKDFKKNLGNVVIVNLYQKLDSKKEFKGI 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +   ++T   LE EK+        +I I   ++ S +L + D
Sbjct: 121 LTDFNDTEISLELEKK--------EIKIERSNISSIKLSLFD 154


>gi|170288838|ref|YP_001739076.1| hypothetical protein TRQ2_1046 [Thermotoga sp. RQ2]
 gi|281412458|ref|YP_003346537.1| protein of unknown function DUF150 [Thermotoga naphthophila RKU-10]
 gi|226734063|sp|B1LAP5|RIMP_THESQ RecName: Full=Ribosome maturation factor rimP
 gi|170176341|gb|ACB09393.1| protein of unknown function DUF150 [Thermotoga sp. RQ2]
 gi|281373561|gb|ADA67123.1| protein of unknown function DUF150 [Thermotoga naphthophila RKU-10]
          Length = 150

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 13/160 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   +    + + EE       +    E +  +L+I ++   G +++RDCE  S+
Sbjct: 1   MFEEMILEKVRKEAERIAEEQGLEIFDVQYRRESRGWILRIIIDNPMGYVSVRDCELFSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +   LD E++IE  Y LEVSSPG+DRP+    D++R+ G +            +  IG+
Sbjct: 61  EMERFLDREDLIEHSYTLEVSSPGLDRPLRGPRDYVRFTGKLAKIVTKDG----KTFIGR 116

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           I    +    +           + +  I+ D +  A L V
Sbjct: 117 IESFVDGTITISD--------GKKKYEINIDDVKRANLEV 148


>gi|253995582|ref|YP_003047646.1| hypothetical protein Mmol_0209 [Methylotenera mobilis JLW8]
 gi|253982261|gb|ACT47119.1| protein of unknown function DUF150 [Methylotenera mobilis JLW8]
          Length = 161

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 82/166 (49%), Gaps = 26/166 (15%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-----NMTLRDCEELSQAIS 77
            D+ ++I+  + ++ +  V + +   +  LL++F+++ +      ++ + DC  +S  + 
Sbjct: 2   QDLQTLIEKSVSQLGYELVDLEISN-RGKLLRVFIDKQNPADSKDSVNIDDCVLVSNQLG 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---------- 127
            +L VE+ I  + RLEVSSPG+DR + +++D++R+ G  V+ ++ +   D          
Sbjct: 61  NLLAVEHEI-DYDRLEVSSPGMDRVLKKEADYVRFVGERVSIKLRVGIKDEGPNATETTL 119

Query: 128 -KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            ++  +G I G  +    LE E             ++  ++  ARL
Sbjct: 120 PRKTFLGLIQGVEDGHLLLEFEGF--------TYKMALSNIDKARL 157


>gi|159162465|pdb|1IB8|A Chain A, Solution Structure And Function Of A Conserved Protein
           Sp14.3 Encoded By An Essential Streptococcus Pneumoniae
           Gene
          Length = 164

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 10  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEMISPV 67

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 128 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 160


>gi|306824617|ref|ZP_07457962.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|315611733|ref|ZP_07886655.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
 gi|304433185|gb|EFM36156.1| conserved hypothetical protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|315316148|gb|EFU64178.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
          Length = 175

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 80

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E   +  K      + I +  +  ARL V
Sbjct: 141 FEGDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 173


>gi|168492709|ref|ZP_02716852.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|183576817|gb|EDT97345.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
          Length = 159

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E G  +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDGLTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|117927004|ref|YP_867621.1| hypothetical protein Mmc1_3730 [Magnetococcus sp. MC-1]
 gi|189040289|sp|A0LE22|RIMP_MAGSM RecName: Full=Ribosome maturation factor rimP
 gi|117610760|gb|ABK46215.1| protein of unknown function DUF150 [Magnetococcus sp. MC-1]
          Length = 185

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 19/168 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVER------DDGNMTLRDCEE 71
             +A  + ++     +      V++    E    ++++  ++       + +++L +C  
Sbjct: 25  SDIAQKVEALAIQAAKTEDCEVVEVIYRREGGVYVVRVAADKLPDDQGQERHISLDECGS 84

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---- 127
           +S+ IS +LDV ++I   Y LEVSSPGI+RP+++  DF R+ G +V              
Sbjct: 85  ISRQISSLLDVHDVIPNAYHLEVSSPGIERPLIKDGDFTRFAGKLVEIRTYQPMDTESGP 144

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           ++K  G ++G  E    +             ++ I ++ +  A L   
Sbjct: 145 RKKFRGTLLGLQEAMVVV--------AEANGEVRIPWEQVAKAHLTFD 184


>gi|227495146|ref|ZP_03925462.1| protein of hypothetical function DUF150 [Actinomyces coleocanis DSM
           15436]
 gi|226831598|gb|EEH63981.1| protein of hypothetical function DUF150 [Actinomyces coleocanis DSM
           15436]
          Length = 168

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 10/163 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELS 73
                +   +   ++PV++        + + E    +++I V+ ++G   ++  D +E+S
Sbjct: 1   MSRTAIEEKVLDCVEPVVKAQGLFLEDVKVSERSETVVRIIVDLEEGTYLVSSDDLQEVS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             IS  LD  + IE  Y LE+S+PG +R +     + R    +V  ++   S     L G
Sbjct: 61  WKISEALDAADPIEQAYTLEISTPGAERKLHTPRHYRRSLNRLVEIKLADKSE----LRG 116

Query: 134 KIMGTSETGFFLEKE----KRGEKDMNELQIAISFDSLLSARL 172
            I    E+   LE+E    K G K      + +SF+++  AR+
Sbjct: 117 FIREVGESELTLEEEAKAPKPGMKPKPGKLVTVSFENISKARV 159


>gi|227892602|ref|ZP_04010407.1| protein of hypothetical function DUF150 [Lactobacillus ultunensis
           DSM 16047]
 gi|227865587|gb|EEJ73008.1| protein of hypothetical function DUF150 [Lactobacillus ultunensis
           DSM 16047]
          Length = 172

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++ +I+E     V +  + EK    L+I+V+R+   + + +   LS+ +S
Sbjct: 16  SKVIDLVRPVVESIIDEHGDMLVDMEYVTEKGKKYLRIYVDREPDGIDIDEIAALSELVS 75

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG +RP+   +D+ R     +   +     DK+   G +
Sbjct: 76  EKLDSLNPDPFPEPYVLELSSPGAERPIKTAADWKRALNDYIHIGLYQKVEDKKVYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE + +         + +    + + R
Sbjct: 136 KSYNDDEIVLEIKDK----TRRKTLTVPRKLIANVR 167


>gi|260654722|ref|ZP_05860210.1| hypothetical protein GCWU000246_00656 [Jonquetella anthropi E3_33
           E1]
 gi|260630437|gb|EEX48631.1| hypothetical protein GCWU000246_00656 [Jonquetella anthropi E3_33
           E1]
          Length = 173

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 8/155 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
             L G+++++++PV+ E+ +R   + L E  ++ +++F++  +  +T  DCE +S+AI P
Sbjct: 6   PALRGELTALLKPVVVELGYRWEGLQLEEIGSMTVRVFIDGPN-GVTADDCEVVSKAIDP 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +L+        Y LEVSSPG++R +    D+ R+ G              ++L G +   
Sbjct: 65  LLEGAMADSNRYYLEVSSPGLERFLFELDDYRRFIGETARIRFHGEGSHIKRLTGVVEAV 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            E       E R      E   AI F+ ++   L+
Sbjct: 125 DE-------EGRVTIHTEEETAAIPFEDIVEGSLV 152


>gi|237734615|ref|ZP_04565096.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229382435|gb|EEO32526.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 167

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I ++I+P++E        I  L+E     L+IFVE+++G++ +  C  +S+AIS
Sbjct: 13  MELLDTIKTLIKPILENNDVYLDDIEYLQENGEWYLRIFVEKNEGSLDMDTCVAVSEAIS 72

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E+ I+G Y LEVSSPG+++P+          G  V  + +  +    ++ G I  
Sbjct: 73  LKMDEEDPIKGEYYLEVSSPGVEKPLKTFEQVKASVGKYVYAKFINPTAGMDEVEGFIKT 132

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E   +  K     +I I + ++   RL V
Sbjct: 133 IEDETIEFEYLVKNIKK----RIKIDYSNIKFIRLAV 165


>gi|148270199|ref|YP_001244659.1| hypothetical protein Tpet_1066 [Thermotoga petrophila RKU-1]
 gi|166977875|sp|A5ILL0|RIMP_THEP1 RecName: Full=Ribosome maturation factor rimP
 gi|147735743|gb|ABQ47083.1| protein of unknown function DUF150 [Thermotoga petrophila RKU-1]
          Length = 150

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 13/160 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   +    + + EE       +    E +  +L+I ++   G +++RDCE  S+
Sbjct: 1   MFEEMILEKVRKEAERIAEEQGLEIFDVQYRRESRGWVLRIIIDNPVGYVSVRDCELFSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I   LD E++IE  Y LEVSSPG+DRP+    D++R+ G +            +  IG+
Sbjct: 61  EIERFLDREDLIEHSYTLEVSSPGLDRPLRGPKDYVRFTGKLAKIVTKDG----KTFIGR 116

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           I    +    +  EKR           I+ D +  A L V
Sbjct: 117 IESFVDGTITISDEKRK--------YEINIDDVKRANLEV 148


>gi|257439269|ref|ZP_05615024.1| protein associated with NUS operon [Faecalibacterium prausnitzii
           A2-165]
 gi|257198311|gb|EEU96595.1| protein associated with NUS operon [Faecalibacterium prausnitzii
           A2-165]
          Length = 163

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 11/161 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRD-CEELSQAISPI 79
           A  + ++++P +E M  R   +   +E     L++ +++ DG     D C ++S A+ PI
Sbjct: 10  AQRVEALVRPTVEGMGLRLWDVVFEKEGPDWYLRVLIDKTDGTTMDTDTCADVSHALDPI 69

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMGT 138
           LD  + IE  Y LEV SPG+ R + R   +    G  V+  +  ++    ++  G +   
Sbjct: 70  LDEADPIEQSYYLEVGSPGLGRKLTRPEHYEAVQGQKVSVRLYRANENGVKEFSGLLTSR 129

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
                 LE             +     ++ + RL   ++L 
Sbjct: 130 EGNTITLE--------GPAGPMQFELSAVSTVRLCDDEDLF 162


>gi|134095612|ref|YP_001100687.1| hypothetical protein HEAR2435 [Herminiimonas arsenicoxydans]
 gi|133739515|emb|CAL62566.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 172

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISP 78
            +S++I+  +  M +  V     +    L++++++      D G++T+ DCE+++  +  
Sbjct: 13  QLSALIEKTVVGMGYELVNFE--QAARGLVRVYIDFTPEDADKGSITVEDCEKVTHQLLH 70

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---DKQKLIGKI 135
           +L VEN    + RLEVSSPG+DRP+ + SD++R+ G     ++ L      +++   G +
Sbjct: 71  VLTVENA--NYERLEVSSPGLDRPLKKLSDYVRFAGAEALVKLRLPMPNAANRKSFQGIL 128

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    LE E     +    ++  +   +  A L+ 
Sbjct: 129 QEPVGETLALEFEG----NEGPAKLEFTLADVDKAHLVP 163


>gi|262066536|ref|ZP_06026148.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291379770|gb|EFE87288.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 156

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +  +   I+ ++ P +EEM+   V +  L++     +++F+E  +G +++ DC +LS  I
Sbjct: 4   NSQIIEKITKIVNPFVEEMNLSLVDVEYLQDGGYWYVRVFIENLNGELSIEDCSKLSSKI 63

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                VE +IE  + LEVSSPG++R + +  D++R+ G  +   +     DK++    I 
Sbjct: 64  EDR--VEELIEHKFFLEVSSPGLERALKKLEDYIRFTGEKITLHLKHKMNDKKQFKAVIK 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                      +K+        ++ I F  +  A ++ 
Sbjct: 122 EVKGDNIVFLIDKK--------EVEIEFKEIRKANILF 151


>gi|322386002|ref|ZP_08059642.1| protein of hypothetical function DUF150 [Streptococcus cristatus
           ATCC 51100]
 gi|321269985|gb|EFX52905.1| protein of hypothetical function DUF150 [Streptococcus cristatus
           ATCC 51100]
          Length = 164

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I+E  +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 12  IVELVREVIEPAIQE-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPL 69

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +    +   G ++G
Sbjct: 70  LDSIKPDPFPDQYFLEVTSPGLERPLKTKEAVAAAVGSYIHVSLYKALDKNKVFEGTLLG 129

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    +E   +  K     ++ I ++ +  ARL V
Sbjct: 130 FEDDVLLMEYMDKTRKK----EVEIPYNLVSKARLAV 162


>gi|300813715|ref|ZP_07094035.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512172|gb|EFK39352.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 153

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
                    I  + Q   EE+ +  V I   +  K+ LL IF+ + +  + L DC ++S 
Sbjct: 1   MDKKSFKNQIFKIAQVSAEELGYEIVDIEYQKGNKHDLLSIFIFKKE-GIDLDDCTKMSH 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I   LD   I+   Y LE+SSPG+DRP+  K D+ R   + V  ++      K++ +G 
Sbjct: 60  NIEKNLDNLEILTRPYYLEISSPGLDRPIKTKDDYRRNLENEVEVKLYGPYNGKKEYVGI 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   +E    +  E           I I   ++ S + +
Sbjct: 120 LKDYNEHNVIICVEND--------NIEIPIKNISSMKQV 150


>gi|168482792|ref|ZP_02707744.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|303260041|ref|ZP_07346014.1| hypothetical protein CGSSp9vBS293_01125 [Streptococcus pneumoniae
           SP-BS293]
 gi|303261225|ref|ZP_07347173.1| hypothetical protein CGSSp14BS292_07790 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303263890|ref|ZP_07349811.1| hypothetical protein CGSSpBS397_04757 [Streptococcus pneumoniae
           BS397]
 gi|303267074|ref|ZP_07352945.1| hypothetical protein CGSSpBS457_10002 [Streptococcus pneumoniae
           BS457]
 gi|303269289|ref|ZP_07355063.1| hypothetical protein CGSSpBS458_08806 [Streptococcus pneumoniae
           BS458]
 gi|172043720|gb|EDT51766.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1873-00]
 gi|302637359|gb|EFL67846.1| hypothetical protein CGSSp14BS292_07790 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638736|gb|EFL69198.1| hypothetical protein CGSSpBS293_01125 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641186|gb|EFL71559.1| hypothetical protein CGSSpBS458_08806 [Streptococcus pneumoniae
           BS458]
 gi|302643402|gb|EFL73678.1| hypothetical protein CGSSpBS457_10002 [Streptococcus pneumoniae
           BS457]
 gi|302646295|gb|EFL76521.1| hypothetical protein CGSSpBS397_04757 [Streptococcus pneumoniae
           BS397]
          Length = 175

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEMISPV 80

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 141 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 173


>gi|282882028|ref|ZP_06290669.1| conserved hypothetical protein [Peptoniphilus lacrimalis 315-B]
 gi|281298058|gb|EFA90513.1| conserved hypothetical protein [Peptoniphilus lacrimalis 315-B]
          Length = 153

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
                    I  + Q   EE+ +  V I   +  K+ LL IF+ + +  + L DC  +S 
Sbjct: 1   MDKKSFKNQIFKIAQVSAEELGYEIVDIEYQKGNKHDLLSIFIFKKE-GIDLDDCTMMSH 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I   LD   I+   Y LE+SSPG+DRP+  K D+ R   + V  ++      K++ +G 
Sbjct: 60  NIEKNLDNLEILSRPYYLEISSPGLDRPIKTKDDYRRNLENEVEVKLYGPYNGKKEYVGI 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +   +E    +  E           I I   ++ S + +
Sbjct: 120 LKDYNEHNVIICVEND--------NIEIPIKNISSMKQV 150


>gi|322376137|ref|ZP_08050646.1| SP14.3 protein [Streptococcus sp. C300]
 gi|321278905|gb|EFX55949.1| SP14.3 protein [Streptococcus sp. C300]
          Length = 159

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+PVI+   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP 
Sbjct: 7   IVELVREVIEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPA 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E   +  K      + I +  +  ARL V
Sbjct: 125 FEGDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|312898334|ref|ZP_07757724.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310620253|gb|EFQ03823.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 153

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 8/157 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                +   +S  ++ +I       V +  + E++  L++F+++ +G + L DC+ +S+ 
Sbjct: 1   MKRSDIEQLVSQEVETIIAGTDLELVDVEYVRERDWYLRVFIDK-EGGVGLEDCQAVSEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LDV++ I   Y LEVSSPG+DR + + +DF+R+    V           + L  ++
Sbjct: 60  LSEFLDVKDPITDKYLLEVSSPGLDRILKKDTDFVRYKDRHVDVHFFTPYKGVKSLTARL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +G  ++G            ++E   AI    +   RL
Sbjct: 120 VGKDKSGVV-------HLLIDEEDAAIDSKDISQIRL 149


>gi|254468932|ref|ZP_05082338.1| hypothetical protein KB13_1157 [beta proteobacterium KB13]
 gi|207087742|gb|EDZ65025.1| hypothetical protein KB13_1157 [beta proteobacterium KB13]
          Length = 158

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 78/149 (52%), Gaps = 10/149 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +I   I+ + +  V+       + L++IF++  +  +++ DC ++S  ++ +L VE
Sbjct: 16  DLEKIISESIQNIGYELVECE-HNHNSGLIRIFIDNGN-LISVDDCVKVSNHLNRVLSVE 73

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +     RLEVSSPG+DR +++ +D+ R+ G  +  ++     +++K  GK++ + E   
Sbjct: 74  -LDYDFSRLEVSSPGVDRKLIKLADYKRFEGEKIKIKLYSPINNQKKFDGKLIASDEKKI 132

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            +          +E  + + FD +  ARL
Sbjct: 133 KILL-------SDEKILEVPFDEIQMARL 154


>gi|296877070|ref|ZP_06901111.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 15912]
 gi|312867870|ref|ZP_07728075.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
 gi|296431931|gb|EFH17737.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 15912]
 gi|311096625|gb|EFQ54864.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
          Length = 159

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ VIQP I+E  F  V +   +   + +L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVDLVTEVIQPAIKE-PFELVDVEYGKMGGDYVLSIFVDKPE-GITLNDTADLTEIISPL 64

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  V   +  +   ++   G ++G
Sbjct: 65  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEALEGAVGKYVNISLYKAVEKQKVFEGNLVG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I ++ +  ARL V
Sbjct: 125 FEEDVLTIEYMDKTRKK----TVDIPYNLVSKARLAV 157


>gi|207723238|ref|YP_002253637.1| hypothetical protein RSMK00472 [Ralstonia solanacearum MolK2]
 gi|206588434|emb|CAQ35397.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 144

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 2/132 (1%)

Query: 43  ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRP 102
           + +      LL++++++ +  + + DCE++S  ++ + +VEN+   + RLEVSSPG+DRP
Sbjct: 1   MEVERAPAGLLRVYIDQAETGIVIEDCEKVSHQLTRVFEVENV--HYERLEVSSPGLDRP 58

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
           +   +DF R+ G  V   + L    ++   G +   +            E       +  
Sbjct: 59  LRTLTDFTRFAGQEVKVTLRLPVEGQKNFTGIVQAPTGEPGQERIGLEFEGKDGPALLEF 118

Query: 163 SFDSLLSARLIV 174
           +   L  ARL+ 
Sbjct: 119 TLSELDRARLVP 130


>gi|304439998|ref|ZP_07399891.1| protein of hypothetical function DUF150 [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371490|gb|EFM25103.1| protein of hypothetical function DUF150 [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 154

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 10/152 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQ-IFVERDDGNMTLRDCEELSQAIS 77
            G+   ++ +   V EE  +  V+++  +     L  +F+ ++D  ++L DC+ +S+AI 
Sbjct: 5   KGILSKLNEISTKVAEERGYEIVEVAYKKATPHSLVSVFIYKED-GISLDDCDTMSRAIE 63

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+IIE  Y LEVSSPG+DRP+  + D  R  G +V  ++       +   G +  
Sbjct: 64  EELDKEDIIEESYYLEVSSPGLDRPIKTQDDLRRNKGKLVEAKLFAPLDGNKLYEGVLAS 123

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
            ++    L+ E +        ++ +   S+  
Sbjct: 124 YTKDTVILDNEGK--------EVELPLKSISK 147


>gi|302380608|ref|ZP_07269073.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
 gi|302311551|gb|EFK93567.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
          Length = 154

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                L   +++ + P+I++       +         +L  ++E+DDG +++ DCE ++ 
Sbjct: 1   MNKKYLRDLMNNDLSPLIKDTGIEFYDVEYSNNNGKNILTFYIEKDDGLISIDDCELINN 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS  LD  + I   Y LE++S  I  P  R  DF +  G+VV   +      +++  G 
Sbjct: 61  KISDKLDEIDPISDPYYLEIASVDITTPFTRDKDFKKNLGNVVIVNLYQKLDSQKEFKGI 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +   ++    LE EK+        +I I   ++ S +L + D
Sbjct: 121 LKDFNDKEISLELEKK--------EIKIERSNISSIKLSLFD 154


>gi|306830061|ref|ZP_07463247.1| hypothetical protein HMPREF8571_1603 [Streptococcus mitis ATCC
           6249]
 gi|304427774|gb|EFM30868.1| hypothetical protein HMPREF8571_1603 [Streptococcus mitis ATCC
           6249]
          Length = 175

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 80

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLS 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 141 FEEEELTVEYMDKTRKK----TVQIPYSLVSKARLAV 173


>gi|270292190|ref|ZP_06198405.1| conserved hypothetical protein [Streptococcus sp. M143]
 gi|293364177|ref|ZP_06610904.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|270279718|gb|EFA25560.1| conserved hypothetical protein [Streptococcus sp. M143]
 gi|291317355|gb|EFE57781.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
          Length = 175

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 23  IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 80

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 81  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 140

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 141 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 173


>gi|15644523|ref|NP_229575.1| hypothetical protein TM1778 [Thermotoga maritima MSB8]
 gi|34223165|sp|Q9X299|RIMP_THEMA RecName: Full=Ribosome maturation factor rimP
 gi|4982356|gb|AAD36841.1|AE001815_15 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 150

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 13/160 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   +    + + EE       +    E +  +L+I ++   G +++RDCE  S+
Sbjct: 1   MFEEMILEKVRKEAERIAEEQGLEIFDVQYRRESRGWVLRIIIDNPVGYVSVRDCELFSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +   LD E+ IE  Y LEVSSPG+DRP+    D++R+ G +            +  IG+
Sbjct: 61  EMERFLDREDFIEHSYTLEVSSPGLDRPLRGPRDYVRFTGKLAKIVTKDG----KTFIGR 116

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           I    +    +  EKR           I+ D +  A L V
Sbjct: 117 IESFVDGTITISDEKRK--------YEINIDDVKRANLEV 148


>gi|256851260|ref|ZP_05556649.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260660684|ref|ZP_05861599.1| UPF0090 protein [Lactobacillus jensenii 115-3-CHN]
 gi|282934728|ref|ZP_06339971.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
 gi|256616322|gb|EEU21510.1| conserved hypothetical protein [Lactobacillus jensenii 27-2-CHN]
 gi|260548406|gb|EEX24381.1| UPF0090 protein [Lactobacillus jensenii 115-3-CHN]
 gi|281301303|gb|EFA93604.1| conserved hypothetical protein [Lactobacillus jensenii 208-1]
          Length = 158

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             +   ++ ++ P+ E+     V +  ++EKN   L+I+V+R +  + + +   LS+ +S
Sbjct: 2   TKIIDLVTDLVTPLAEKRGDELVDVEYVKEKNQYYLRIYVDRGESGIDIEEIAALSEIVS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG++RP+  + D+ +     +          ++   G +
Sbjct: 62  EELDKLNPDPFTEPYMLELSSPGLERPIKNERDWNKALNKYIHVACYQKIDGQKSFDGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +         +   + +      ++ I   ++ +AR
Sbjct: 122 LSRDNK----KITLKIKIKTRTKELEIPIGAIANAR 153


>gi|297206127|ref|ZP_06923522.1| protein of hypothetical function DUF150 [Lactobacillus jensenii
           JV-V16]
 gi|297149253|gb|EFH29551.1| protein of hypothetical function DUF150 [Lactobacillus jensenii
           JV-V16]
          Length = 169

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 73/168 (43%), Gaps = 10/168 (5%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMT 65
           L S  E  +     +   ++ ++ P+ E+     V +  ++EKN   L+I+V+R +  + 
Sbjct: 4   LFSTEEDFL---TKIIDLVTDLVTPLAEKRGDELVDVEYVKEKNQYYLRIYVDRGESGID 60

Query: 66  LRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           + +   LS+ +S  LD    +     Y LE+SSPG++RP+  + D+ +     +      
Sbjct: 61  IEEIAALSEIVSEELDKLNPDPFTEPYMLELSSPGLERPIKNERDWNKALNKYIHVACYQ 120

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
               ++   G ++         +   + +      ++ I   ++ +AR
Sbjct: 121 KIDGQKSFDGTLLSRDNK----KITLKIKIKTRTKELEIPIGAIANAR 164


>gi|224543311|ref|ZP_03683850.1| hypothetical protein CATMIT_02511 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523844|gb|EEF92949.1| hypothetical protein CATMIT_02511 [Catenibacterium mitsuokai DSM
           15897]
          Length = 153

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 5/153 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             I   + P+I         +  ++EK    L++F+E++DGN+ +  C  +S+A+S  LD
Sbjct: 3   EKIKEGLLPIIASFECHLDSMEYVKEKGEWYLRVFIEKNDGNLDMDTCVAVSEAVSEKLD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             ++I+  Y LEVSSPGI++P+          G  V  ++         L G +      
Sbjct: 63  ELDLIKDEYYLEVSSPGIEKPLKTFEQVEAHVGSYVHIDLKNPQNGIDSLEGTLASIDGK 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++   +  +     ++ I++D +   RL V
Sbjct: 123 ELLIQYMVKAVRK----KMTINYDDIKFIRLAV 151


>gi|148983930|ref|ZP_01817249.1| hypothetical protein CGSSp3BS71_07349 [Streptococcus pneumoniae
           SP3-BS71]
 gi|148990070|ref|ZP_01821324.1| hypothetical protein CGSSp6BS73_05420 [Streptococcus pneumoniae
           SP6-BS73]
 gi|148992338|ref|ZP_01822061.1| hypothetical protein CGSSp9BS68_06575 [Streptococcus pneumoniae
           SP9-BS68]
 gi|148998225|ref|ZP_01825694.1| hypothetical protein CGSSp11BS70_03456 [Streptococcus pneumoniae
           SP11-BS70]
 gi|168485663|ref|ZP_02710171.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|168490558|ref|ZP_02714701.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|168576546|ref|ZP_02722420.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|225854093|ref|YP_002735605.1| hypothetical protein SPJ_0512 [Streptococcus pneumoniae JJA]
 gi|225856262|ref|YP_002737773.1| hypothetical protein SPP_0569 [Streptococcus pneumoniae P1031]
 gi|225860557|ref|YP_002742066.1| hypothetical protein SPT_0582 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|237650176|ref|ZP_04524428.1| hypothetical protein SpneC1_05532 [Streptococcus pneumoniae CCRI
           1974]
 gi|237821776|ref|ZP_04597621.1| hypothetical protein SpneC19_05602 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|298230908|ref|ZP_06964589.1| hypothetical protein SpneCMD_09588 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255626|ref|ZP_06979212.1| hypothetical protein SpneCM_08527 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298502346|ref|YP_003724286.1| hypothetical protein HMPREF0837_10844 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|303255253|ref|ZP_07341326.1| hypothetical protein CGSSpBS455_07226 [Streptococcus pneumoniae
           BS455]
 gi|307709806|ref|ZP_07646257.1| conserved hypothetical protein [Streptococcus mitis SK564]
 gi|254806452|sp|C1CCT4|RIMP_STRZJ RecName: Full=Ribosome maturation factor rimP
 gi|254806512|sp|C1CJ35|RIMP_STRZP RecName: Full=Ribosome maturation factor rimP
 gi|254806519|sp|C1CQ44|RIMP_STRZT RecName: Full=Ribosome maturation factor rimP
 gi|259586203|sp|C1C5S4|RIMP_STRP7 RecName: Full=Ribosome maturation factor rimP
 gi|259586204|sp|B2IME0|RIMP_STRPS RecName: Full=Ribosome maturation factor rimP
 gi|147755868|gb|EDK62912.1| hypothetical protein CGSSp11BS70_03456 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147924077|gb|EDK75189.1| hypothetical protein CGSSp3BS71_07349 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147924596|gb|EDK75683.1| hypothetical protein CGSSp6BS73_05420 [Streptococcus pneumoniae
           SP6-BS73]
 gi|147928964|gb|EDK79976.1| hypothetical protein CGSSp9BS68_06575 [Streptococcus pneumoniae
           SP9-BS68]
 gi|183571099|gb|EDT91627.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|183574915|gb|EDT95443.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC0288-04]
 gi|183577690|gb|EDT98218.1| conserved hypothetical protein [Streptococcus pneumoniae MLV-016]
 gi|225722728|gb|ACO18581.1| conserved hypothetical protein [Streptococcus pneumoniae JJA]
 gi|225725938|gb|ACO21790.1| conserved hypothetical protein [Streptococcus pneumoniae P1031]
 gi|225727228|gb|ACO23079.1| conserved hypothetical protein [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237941|gb|ADI69072.1| protein of hypothetical function DUF150 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301799609|emb|CBW32164.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
 gi|301801433|emb|CBW34120.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
 gi|302597794|gb|EFL64867.1| hypothetical protein CGSSpBS455_07226 [Streptococcus pneumoniae
           BS455]
 gi|307619508|gb|EFN98633.1| conserved hypothetical protein [Streptococcus mitis SK564]
 gi|327390292|gb|EGE88633.1| hypothetical protein SPAR5_0534 [Streptococcus pneumoniae GA04375]
 gi|332076388|gb|EGI86851.1| hypothetical protein SPAR68_0575 [Streptococcus pneumoniae GA41301]
 gi|332202436|gb|EGJ16505.1| hypothetical protein SPAR69_0547 [Streptococcus pneumoniae GA41317]
 gi|332203717|gb|EGJ17784.1| hypothetical protein SPAR93_0588 [Streptococcus pneumoniae GA47368]
          Length = 159

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEMISPV 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|15900464|ref|NP_345068.1| hypothetical protein SP_0552 [Streptococcus pneumoniae TIGR4]
 gi|111657274|ref|ZP_01408040.1| hypothetical protein SpneT_02001512 [Streptococcus pneumoniae
           TIGR4]
 gi|149012574|ref|ZP_01833571.1| hypothetical protein CGSSp19BS75_10108 [Streptococcus pneumoniae
           SP19-BS75]
 gi|168488243|ref|ZP_02712442.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|194396782|ref|YP_002037213.1| hypothetical protein SPG_0498 [Streptococcus pneumoniae G54]
 gi|221231385|ref|YP_002510537.1| hypothetical protein SPN23F_04980 [Streptococcus pneumoniae ATCC
           700669]
 gi|307710805|ref|ZP_07647233.1| conserved hypothetical protein [Streptococcus mitis SK321]
 gi|34222993|sp|Q97S61|RIMP_STRPN RecName: Full=Ribosome maturation factor rimP; AltName: Full=SP14.3
 gi|226707643|sp|B5E262|RIMP_STRP4 RecName: Full=Ribosome maturation factor rimP
 gi|254806440|sp|B8ZM89|RIMP_STRPJ RecName: Full=Ribosome maturation factor rimP
 gi|14972026|gb|AAK74708.1| SP14.3 protein [Streptococcus pneumoniae TIGR4]
 gi|147763379|gb|EDK70316.1| hypothetical protein CGSSp19BS75_10108 [Streptococcus pneumoniae
           SP19-BS75]
 gi|183572963|gb|EDT93491.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|194356449|gb|ACF54897.1| hypothetical protein SPG_0498 [Streptococcus pneumoniae G54]
 gi|220673845|emb|CAR68348.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
           700669]
 gi|301793756|emb|CBW36143.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
 gi|307617411|gb|EFN96583.1| conserved hypothetical protein [Streptococcus mitis SK321]
 gi|332074366|gb|EGI84842.1| hypothetical protein SPAR50_0547 [Streptococcus pneumoniae GA17570]
 gi|332204572|gb|EGJ18637.1| hypothetical protein SPAR120_0537 [Streptococcus pneumoniae
           GA47901]
          Length = 159

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|322391043|ref|ZP_08064547.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 903]
 gi|321142273|gb|EFX37747.1| protein of hypothetical function DUF150 [Streptococcus
           parasanguinis ATCC 903]
          Length = 159

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ VIQP I+E  F  V +   +   + +L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVDLVTEVIQPAIQE-PFELVDVEYGKMGGDYVLSIFVDKPE-GITLNDTADLTEIISPL 64

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  V   +  +   ++   G ++ 
Sbjct: 65  LDQIKPDPFPEQYFLEVTSPGLERPLKTKQALEGALGKYVNISLYKAVEKQKVFEGTLVR 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I ++ +  ARL V
Sbjct: 125 FEEDVLTIEYMDKTRKK----TVEIPYNLVSKARLAV 157


>gi|157151233|ref|YP_001449858.1| hypothetical protein SGO_0542 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|259586201|sp|A8AVP8|RIMP_STRGC RecName: Full=Ribosome maturation factor rimP
 gi|157076027|gb|ABV10710.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 162

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +++VI+P I    F  V +   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 10  IVELVTAVIEPAITA-PFELVDVEYGKIGSDYVLSVFVDKPE-GITVNDTADLTDIISPL 67

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  S   ++   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEVTSPGLERPLKTKEQVEAAVGQYIHVGLYKSLDKQKVFEGTLLQ 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    LE   +  K     +I I +  +  ARL V
Sbjct: 128 FKEDVLTLEYMDKTRKK----EIDIPYSLVSKARLAV 160


>gi|307702468|ref|ZP_07639423.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|307623962|gb|EFO02944.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
          Length = 159

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLVS 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|327398876|ref|YP_004339745.1| Ribosome maturation factor rimP [Hippea maritima DSM 10411]
 gi|327181505|gb|AEA33686.1| Ribosome maturation factor rimP [Hippea maritima DSM 10411]
          Length = 140

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 16/152 (10%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L+ ++   I  V+E + +    I L ++K   + I++++  G +++ DCE  S+ IS +L
Sbjct: 2   LSEELKEDIFVVVESLGYSVYDIELTQKK---ITIYIDKP-GGVSIDDCELASRNISALL 57

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DV++   G Y LEVSSPGI+R +  K  F+   G            + +   G +   ++
Sbjct: 58  DVKDPFSGSYTLEVSSPGINRKLKTKEHFMAAIGKKCVVHTHFPVDNSKVFKGILTECND 117

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +E             + I FD++  AR+
Sbjct: 118 NEIVIE------------GVRIEFDNIKKARI 137


>gi|262282170|ref|ZP_06059939.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
 gi|262262624|gb|EEY81321.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
          Length = 162

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +++VI+P I    F  V +   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 10  IVELVTAVIEPAITA-PFELVDVEYGKIGSDYVLSVFVDKPE-GITVNDTADLTDIISPL 67

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  S   ++   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEVTSPGLERPLKTKEQVEAAVGQYIHVGLYKSLDKQKVFEGTLLQ 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K     +I I +  +  ARL V
Sbjct: 128 FKEDVLTIEYMDKTRKK----EIDIPYSLVSKARLAV 160


>gi|315222141|ref|ZP_07864050.1| UPF0090 protein [Streptococcus anginosus F0211]
 gi|315188767|gb|EFU22473.1| UPF0090 protein [Streptococcus anginosus F0211]
          Length = 162

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+E  +  V I   +   + +L IFV++  G +T+ D  +L+  ISP+
Sbjct: 10  IVELVKEVVEPVIQE-PYELVNIEYGKMGSDHVLSIFVDKP-GGITVNDTADLTDIISPL 67

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +    +   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEVTSPGLERPLKTKEQLAAAVGEYIHVSLYQALDKSKVFEGTLLS 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K +    + I +  +  ARL V
Sbjct: 128 FEEDHLTMEYMDKTRKKV----VQIPYQLVSKARLAV 160


>gi|309799812|ref|ZP_07694019.1| conserved hypothetical protein [Streptococcus infantis SK1302]
 gi|308116528|gb|EFO53997.1| conserved hypothetical protein [Streptococcus infantis SK1302]
          Length = 159

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKEAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|167756907|ref|ZP_02429034.1| hypothetical protein CLORAM_02456 [Clostridium ramosum DSM 1402]
 gi|167703082|gb|EDS17661.1| hypothetical protein CLORAM_02456 [Clostridium ramosum DSM 1402]
          Length = 155

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 5/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   I ++I+P++E        I  L+E     L+IFVE+++G++ +  C  +S+AIS
Sbjct: 1   MELLDTIKTLIKPILENNDVYLDDIEYLQENGEWYLRIFVEKNEGSLDMDTCVAVSEAIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E+ I+G Y LEVSSPG+++P+          G  V  + +  +    ++ G I  
Sbjct: 61  LKMDEEDPIKGEYYLEVSSPGVEKPLKTFEQVKASVGKYVYAKFINPTAGMDEVEGFIKT 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +     E   +  K     +I I + ++   RL V
Sbjct: 121 IEDETIEFEYLVKNIKK----RIKIDYSNIKFIRLAV 153


>gi|289423156|ref|ZP_06424971.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
 gi|289156487|gb|EFD05137.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
          Length = 154

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 83/161 (51%), Gaps = 12/161 (7%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQA 75
               +A  +  ++QP+ +   F  V +  ++E  +  L++ ++ +D  + L +CE++S+ 
Sbjct: 1   MKKNIAQQVEKLVQPIADLYGFELVDVEYVKEAGIYYLRVIIDSED-GIGLDECEKVSRD 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG--DKQKLIG 133
           ++PILD +++IE +Y LEV SPGIDR + R  ++ +++G +V  ++  ++     +    
Sbjct: 60  LNPILDEKDMIEENYLLEVCSPGIDRILKRDHEYEKYSGKLVEVKLYANNDIVKGKHFEA 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            + G  +    L  + +        ++ ++   +   RL V
Sbjct: 120 DLCGLEDDNIVLLYKGK--------ELKLNRKEVAQVRLAV 152


>gi|152981795|ref|YP_001354187.1| hypothetical protein mma_2497 [Janthinobacterium sp. Marseille]
 gi|151281872|gb|ABR90282.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 170

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 16/159 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----RDDGNMTLRDCEELSQAISP 78
            +S++I+  +  M +  V     +    L+++F++      D G +T+ DCE+++  +  
Sbjct: 11  QLSALIEKTVVGMGYELVNFE--QAARGLVRVFIDFTPEDADKGAITVEDCEKVTHQLLH 68

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---DKQKLIGKI 135
           +L VEN    + RLEVSSPG+DRP+ + SD++R+ G     ++ +      +++   G +
Sbjct: 69  VLTVENA--NYERLEVSSPGLDRPLKKLSDYVRFAGAEALVKLRMPMPNAANRKSFQGIL 126

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                    LE E          ++  +   +  A L+ 
Sbjct: 127 QEPVGETLALEFEGND----GPAKLEFTLADVDKAHLVP 161


>gi|15902521|ref|NP_358071.1| hypothetical protein spr0477 [Streptococcus pneumoniae R6]
 gi|116516675|ref|YP_815984.1| hypothetical protein SPD_0478 [Streptococcus pneumoniae D39]
 gi|149002223|ref|ZP_01827165.1| hypothetical protein CGSSp14BS69_01239 [Streptococcus pneumoniae
           SP14-BS69]
 gi|149005662|ref|ZP_01829401.1| hypothetical protein CGSSp18BS74_08855 [Streptococcus pneumoniae
           SP18-BS74]
 gi|149021507|ref|ZP_01835562.1| hypothetical protein CGSSp23BS72_06564 [Streptococcus pneumoniae
           SP23-BS72]
 gi|169833553|ref|YP_001694039.1| hypothetical protein SPH_0649 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|307126755|ref|YP_003878786.1| hypothetical protein SP670_0615 [Streptococcus pneumoniae 670-6B]
 gi|34222871|sp|Q8DQV6|RIMP_STRR6 RecName: Full=Ribosome maturation factor rimP
 gi|122279130|sp|Q04LW4|RIMP_STRP2 RecName: Full=Ribosome maturation factor rimP
 gi|226707991|sp|B1IA76|RIMP_STRPI RecName: Full=Ribosome maturation factor rimP
 gi|15458047|gb|AAK99281.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077251|gb|ABJ54971.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
 gi|147759538|gb|EDK66529.1| hypothetical protein CGSSp14BS69_01239 [Streptococcus pneumoniae
           SP14-BS69]
 gi|147762602|gb|EDK69562.1| hypothetical protein CGSSp18BS74_08855 [Streptococcus pneumoniae
           SP18-BS74]
 gi|147930203|gb|EDK81188.1| hypothetical protein CGSSp23BS72_06564 [Streptococcus pneumoniae
           SP23-BS72]
 gi|168996055|gb|ACA36667.1| conserved hypothetical protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|306483817|gb|ADM90686.1| conserved hypothetical protein [Streptococcus pneumoniae 670-6B]
 gi|332076984|gb|EGI87446.1| hypothetical protein SPAR148_0517 [Streptococcus pneumoniae
           GA17545]
          Length = 159

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVRIPYSLVSKARLAV 157


>gi|312872031|ref|ZP_07732109.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1]
 gi|311092444|gb|EFQ50810.1| conserved hypothetical protein [Lactobacillus iners LEAF 2062A-h1]
          Length = 148

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD    + + 
Sbjct: 4   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 63

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE 
Sbjct: 64  DPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI 123

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
               +    + +IAI  + + + R
Sbjct: 124 ----KIKTQQKKIAIPRNMIANIR 143


>gi|307705616|ref|ZP_07642468.1| conserved hypothetical protein [Streptococcus mitis SK597]
 gi|307620893|gb|EFN99977.1| conserved hypothetical protein [Streptococcus mitis SK597]
          Length = 159

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVIE   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEMISPV 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEEELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|307707651|ref|ZP_07644132.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|322377699|ref|ZP_08052189.1| SP14.3 protein [Streptococcus sp. M334]
 gi|307616364|gb|EFN95556.1| conserved hypothetical protein [Streptococcus mitis NCTC 12261]
 gi|321281464|gb|EFX58474.1| SP14.3 protein [Streptococcus sp. M334]
          Length = 159

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIQA-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEIISPV 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|313896717|ref|ZP_07830265.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312974634|gb|EFR40101.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 149

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 13/157 (8%)

Query: 17  GDMGLAGDISSVIQPVI-EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++Q ++  +     V +  + E++  L++++++ +G + + DC  LS+ 
Sbjct: 1   MSAKIEERVEEIVQDLLPVQPELELVDVEYVRERDWYLRVYIDK-EGGIDIEDCRTLSER 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  ILD E+ I   Y LEVSSPG+DR + +  DF R +G  V   +      K+ L G++
Sbjct: 60  LEEILDREDFIADAYILEVSSPGLDRVLRKARDFEREHGKRVDVALYAPLDGKKNLTGEL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G       L+ +           + I  + +   RL
Sbjct: 120 TGYDGNVLILDDD-----------VRIPMEQVSQVRL 145


>gi|319937396|ref|ZP_08011803.1| hypothetical protein HMPREF9488_02638 [Coprobacillus sp. 29_1]
 gi|319807762|gb|EFW04355.1| hypothetical protein HMPREF9488_02638 [Coprobacillus sp. 29_1]
          Length = 153

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 5/153 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             I+S+IQP+++        I  + EKN   L+IF+E++DG++ +  C  +S+ IS  LD
Sbjct: 3   EKITSLIQPILDNHDVYLDDIEYVSEKNEWYLRIFIEKNDGHLDMDTCVAVSEDISLKLD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            E+II   Y LEVSSPG ++P+       +  G  V  +    +    ++ G +      
Sbjct: 63  EEDIITNEYYLEVSSPGAEKPLKTLEKVQQSIGEYVYIQFKKPTLGMDEVYGTLFNVDGE 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              L+   +  K   +    I +D +   RL V
Sbjct: 123 MIELQYMVKNIKKKCD----IKYDDIAFIRLAV 151


>gi|259585828|sp|B8FCY3|RIMP_DESAA RecName: Full=Ribosome maturation factor rimP
          Length = 152

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 10/151 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +    +E      V           +L+++V++ +G +TL DC  +S+ +  +LD
Sbjct: 2   EQVRKLTGAALEAEGMDLVLAEFKREGGGYILRLYVDK-EGGITLGDCTMVSRYVGDLLD 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
                   YRLEVSSPG+DRP+ R+  F R+ G             ++K  G + G    
Sbjct: 61  AYADEMPRYRLEVSSPGLDRPLTREDHFRRFEGRTALIVTKEPREGRKKFRGVLSGALNG 120

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              L  +        E+ +  +   + SARL
Sbjct: 121 VITLVAD--------EVPMEFALHEIESARL 143


>gi|289167248|ref|YP_003445515.1| hypothetical protein smi_0375 [Streptococcus mitis B6]
 gi|288906813|emb|CBJ21647.1| conserved hypothetical protein [Streptococcus mitis B6]
          Length = 159

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+   F  V I   +   +++L IFV++ +  +TL D  +L++ ISP+
Sbjct: 7   IVELVREVVEPVIQS-PFELVDIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEVISPV 64

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LE++SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 65  LDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLA 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K      + I +  +  ARL V
Sbjct: 125 FEEDELTMEYMDKTRKK----TVQIPYSLVSKARLAV 157


>gi|146319504|ref|YP_001199216.1| hypothetical protein SSU05_1850 [Streptococcus suis 05ZYH33]
 gi|259645119|sp|A4VXH7|RIMP_STRSY RecName: Full=Ribosome maturation factor rimP
 gi|145690310|gb|ABP90816.1| unknown protein [Streptococcus suis 05ZYH33]
          Length = 158

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 9/159 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +++ I P I+   +  V +   +   + +L IFV++ +G ++L+D  +LS+ IS
Sbjct: 4   SSIIELVTAAITPAIQT-PYELVDVEYGKMGGDYVLSIFVDK-EGGISLQDTADLSEKIS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           PILD    +     Y LEV+SPG++RP+       +  G  +  ++  +    +   G +
Sbjct: 62  PILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIHVKLYQAIDKLKVFEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    T   +E   +  K     ++ I + ++  ARL V
Sbjct: 122 LSFDGTDLIMEYMDKTRKK----EVTIPYQTVAKARLAV 156


>gi|227878820|ref|ZP_03996727.1| protein of hypothetical function DUF150 [Lactobacillus crispatus
           JV-V01]
 gi|227861568|gb|EEJ69180.1| protein of hypothetical function DUF150 [Lactobacillus crispatus
           JV-V01]
          Length = 172

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S
Sbjct: 16  SKVIDSVRPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVS 75

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + +   Y LE+SSPG +RP+  K+D+ +     +   +     +K+   G +
Sbjct: 76  EKLDALDPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIENKKMYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE + +         + +    + + R
Sbjct: 136 KSYNDDEVVLEIKDK----TRRKTLTVPRKLIANIR 167


>gi|218782564|ref|YP_002433882.1| hypothetical protein Dalk_4736 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763948|gb|ACL06414.1| protein of unknown function DUF150 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 182

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 10/160 (6%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEEL 72
           R      +   +  +    +E      V           +L+++V++ +G +TL DC  +
Sbjct: 23  RRVDADRILEQVRKLTGAALEAEGMDLVLAEFKREGGGYILRLYVDK-EGGITLGDCTMV 81

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
           S+ +  +LD        YRLEVSSPG+DRP+ R+  F R+ G             ++K  
Sbjct: 82  SRYVGDLLDAYADEMPRYRLEVSSPGLDRPLTREDHFRRFEGRTALIVTKEPREGRKKFR 141

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G + G       L  +        E+ +  +   + SARL
Sbjct: 142 GVLSGALNGVITLVAD--------EVPMEFALHEIESARL 173


>gi|332295449|ref|YP_004437372.1| Ribosome maturation factor rimP [Thermodesulfobium narugense DSM
           14796]
 gi|332178552|gb|AEE14241.1| Ribosome maturation factor rimP [Thermodesulfobium narugense DSM
           14796]
          Length = 159

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 9/158 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   + ++++ V+ ++ F    +    + K  +L++F++  +  ++L DCE +S+
Sbjct: 1   MKSKDIKEKLLNIVEKVLLDIGFELYDLEYFKQGKRWILRVFIDNLEKPISLDDCELVSK 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S ILD  ++I   + LEVSSPGI+R + + SDF R+ G  +       +     +IG 
Sbjct: 61  KLSAILDYYDLIPESFYLEVSSPGIERKLKKDSDFTRFKGEEIIVIFQKPNISP--IIGI 118

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G    G ++       K+       I+ + +   R+
Sbjct: 119 LEGIDSDGNYIIVNTGKSKEK------INRNDVKEVRI 150


>gi|146321699|ref|YP_001201410.1| hypothetical protein SSU98_1852 [Streptococcus suis 98HAH33]
 gi|259586202|sp|A4W3S1|RIMP_STRS2 RecName: Full=Ribosome maturation factor rimP
 gi|145692505|gb|ABP93010.1| unknown protein [Streptococcus suis 98HAH33]
 gi|292559122|gb|ADE32123.1| hypothetical protein SSGZ1_1667 [Streptococcus suis GZ1]
          Length = 158

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 9/159 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +++ I P I+   +  V +   +   + +L IFV++ +G ++L+D  +LS+ IS
Sbjct: 4   SSIIELVTAAITPAIQT-PYELVDVEYGKMGGDYVLSIFVDK-EGGISLQDTADLSEKIS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           PILD    +     Y LEV+SPG++RP+       +  G  +  ++  +    +   G +
Sbjct: 62  PILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIHVKLYQAIDKIKVFEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    T   +E   +  K     ++ I + ++  ARL V
Sbjct: 122 LSFDGTDLIMEYMDKTRKK----EVTIPYQTVAKARLAV 156


>gi|328465728|gb|EGF36932.1| ribosome maturation protein RimP [Lactobacillus helveticus MTCC
           5463]
          Length = 158

 Score = 99.3 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  VI+ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S
Sbjct: 2   SKVVDLVRPVIETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +
Sbjct: 62  EKLDTIDPDPLPDPYVLELSSPGAERPITTEADWKRALNDYVHIGLYQKIDDKKVYEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              +     LE + +        ++ I    +   R
Sbjct: 122 KYYNNDEIVLEVKDK----TRRKKLTIPRKLIAKIR 153


>gi|126640414|ref|YP_001083398.1| hypothetical protein A1S_0334 [Acinetobacter baumannii ATCC 17978]
          Length = 157

 Score = 99.3 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 23/161 (14%)

Query: 34  EEMSFRSVQISLLE-EKNLLLQIFVERD-----------------DGNMTLRDCEELSQA 75
           E        I  L   K  LL+I+++R                     + + DC  ++Q 
Sbjct: 2   EACGVDLWGIEFLPQGKRSLLRIYIDRPVDENAEPVINEDGEVEQGRGIGVEDCVRVTQQ 61

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  +LDV + I G Y LEVSSPG DRP  +      + G  VA  ++ +  +++K   K+
Sbjct: 62  VGAMLDVHDPISGEYALEVSSPGWDRPFFQLEQLQGYIGQQVALRLIAAVENRRKFQAKL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +        ++ E  G+       + I  +++  A LI  D
Sbjct: 122 LAVDLENEEIQVEVEGK-----HVLDIDSNNIDKANLIYQD 157


>gi|119485068|ref|ZP_01619453.1| hypothetical protein L8106_06459 [Lyngbya sp. PCC 8106]
 gi|119457296|gb|EAW38421.1| hypothetical protein L8106_06459 [Lyngbya sp. PCC 8106]
          Length = 172

 Score = 99.3 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV E +    V  +        +L++ +   + +  L DCE++S+A+   
Sbjct: 24  LVPKIIDLATPVAEALGLEVVGAVFYTNHSPPVLRVDIRNPNQDTGLDDCEQMSRALEEQ 83

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + I   Y LE+SSPGI + +    DF+ + G  +      +    ++  GK++   
Sbjct: 84  LDTIDFIPDAYVLEISSPGISQILTSDRDFISFKGFPILIRTSEAYKGYKEWSGKLIRRD 143

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           ET  +L ++ R       +   +    
Sbjct: 144 ETAVYLNQKGRQMAIPRPVIAEVLLQE 170


>gi|312871843|ref|ZP_07731928.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a]
 gi|311092624|gb|EFQ50983.1| conserved hypothetical protein [Lactobacillus iners LEAF 3008A-a]
          Length = 146

 Score = 99.3 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 7/145 (4%)

Query: 30  QPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD--VENII 86
            P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD    + +
Sbjct: 1   TPLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPL 60

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
              Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE
Sbjct: 61  PDPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILE 120

Query: 147 KEKRGEKDMNELQIAISFDSLLSAR 171
                +    + +IAI  + + + R
Sbjct: 121 I----KIKTQQKKIAIPRNMIANIR 141


>gi|145589411|ref|YP_001156008.1| hypothetical protein Pnuc_1229 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|226696286|sp|A4SY80|RIMP_POLSQ RecName: Full=Ribosome maturation factor rimP
 gi|145047817|gb|ABP34444.1| protein of unknown function DUF150 [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 163

 Score = 99.3 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 10/155 (6%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELSQAISPILDVE 83
             +I   +E + +  V+I    E   LL++ +E  D    +++ DCE++S  +S  L VE
Sbjct: 4   QQIIAAELENLGYTLVEIE--REAGGLLRVTIENPDYERLISVLDCEKVSHQLSYALPVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLE+SSPG+DRP+   +DF R+ G  V  ++ +++G+++   G + G      
Sbjct: 62  NI--PYERLEISSPGLDRPVKSAADFERFTGMEVDLKLRVAAGNRKNFRGVLQGLLSGEL 119

Query: 144 FLEKEKRG----EKDMNELQIAISFDSLLSARLIV 174
                K G      D  E Q+  S   +   RL+ 
Sbjct: 120 NSPDAKFGLLFEGADGAESQLEFSLAEVDKTRLVP 154


>gi|186685821|ref|YP_001869017.1| hypothetical protein Npun_R5776 [Nostoc punctiforme PCC 73102]
 gi|226707751|sp|B2J958|RIMP_NOSP7 RecName: Full=Ribosome maturation factor rimP
 gi|186468273|gb|ACC84074.1| protein of unknown function DUF150 [Nostoc punctiforme PCC 73102]
          Length = 153

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV EE+    V +     +   +L++ +     +  L DCE +S+A+   
Sbjct: 5   LVPQIIDLATPVAEELGLEVVGVVFHTHQSPPVLRVDIRNPQQDTGLNDCERMSRALEAS 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   I+   Y LEVSSPGI R +V   +F+ + G  V          +Q+ IG+++   
Sbjct: 65  LDAAEIVPDTYVLEVSSPGISRQLVTDREFISFKGFPVIISTTPPYDGQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L ++ R         + I    +   +L
Sbjct: 125 EITLYLNQKGR--------VVEIPRSLITKVQL 149


>gi|223934078|ref|ZP_03626027.1| protein of unknown function DUF150 [Streptococcus suis 89/1591]
 gi|253752515|ref|YP_003025656.1| hypothetical protein SSUSC84_1671 [Streptococcus suis SC84]
 gi|253754341|ref|YP_003027482.1| hypothetical protein SSU1646 [Streptococcus suis P1/7]
 gi|253756275|ref|YP_003029415.1| hypothetical protein SSUBM407_1719 [Streptococcus suis BM407]
 gi|302024449|ref|ZP_07249660.1| hypothetical protein Ssui0_07814 [Streptococcus suis 05HAS68]
 gi|330833474|ref|YP_004402299.1| hypothetical protein SSUST3_1700 [Streptococcus suis ST3]
 gi|223897248|gb|EEF63660.1| protein of unknown function DUF150 [Streptococcus suis 89/1591]
 gi|251816804|emb|CAZ52447.1| conserved hypothetical protein [Streptococcus suis SC84]
 gi|251818739|emb|CAZ56575.1| conserved hypothetical protein [Streptococcus suis BM407]
 gi|251820587|emb|CAR47343.1| conserved hypothetical protein [Streptococcus suis P1/7]
 gi|319758924|gb|ADV70866.1| hypothetical protein SSUJS14_1808 [Streptococcus suis JS14]
 gi|329307697|gb|AEB82113.1| hypothetical protein SSUST3_1700 [Streptococcus suis ST3]
          Length = 156

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 9/159 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +++ I P I+   +  V +   +   + +L IFV++ +G ++L+D  +LS+ IS
Sbjct: 2   SSIIELVTAAITPAIQT-PYELVDVEYGKMGGDYVLSIFVDK-EGGISLQDTADLSEKIS 59

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           PILD    +     Y LEV+SPG++RP+       +  G  +  ++  +    +   G +
Sbjct: 60  PILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIHVKLYQAIDKIKVFEGTL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +    T   +E   +  K     ++ I + ++  ARL V
Sbjct: 120 LSFDGTDLIMEYMDKTRKK----EVTIPYQTVAKARLAV 154


>gi|313901627|ref|ZP_07835064.1| protein of unknown function DUF150 [Thermaerobacter subterraneus
           DSM 13965]
 gi|313468108|gb|EFR63585.1| protein of unknown function DUF150 [Thermaerobacter subterraneus
           DSM 13965]
          Length = 153

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 66/160 (41%), Gaps = 10/160 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++ + +P+ E+     + +          LQ  V+R +G +T+ +C   S+
Sbjct: 1   MSNRKVEAAVAQLAEPLAEQRGLVLLDVEYRREGGRWFLQCVVDR-EGGVTMDECAAFSE 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+ P+L+  + +     +EV SPG+DR +    +F  + G  V          +++  G+
Sbjct: 60  ALDPVLEGVDGLAEDVVVEVMSPGLDRTLRNDREFAWFRGREVEVTTYRPVDGRRRFQGR 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G  +    +           E    I  D++   +L V
Sbjct: 120 LEGLEDGHVVV--------AGREGIHRIPRDAVAKTQLQV 151


>gi|297588446|ref|ZP_06947089.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
 gi|297573819|gb|EFH92540.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
          Length = 154

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                L   +++ + P+IE+       +    +    +L  ++E+D+G +++ DCE ++ 
Sbjct: 1   MNKKYLRELMNNDLSPLIEDTGIDFYDVEYSNQNGKNILTFYIEKDEGLISIDDCELINN 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I+  LD  + I   Y LE++S  I  P  R  DF +  G+VV   +      K++  G 
Sbjct: 61  RITDKLDEIDPISDPYYLEIASVDITTPFTRDKDFKKNLGNVVIVNLYQKLDSKKEFKGI 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
           +   ++    LE EK         QI I   ++ S +L + D
Sbjct: 121 LKDFNDQEISLELEK--------NQIKIERSNISSIKLSLFD 154


>gi|161507685|ref|YP_001577639.1| hypothetical protein lhv_1346 [Lactobacillus helveticus DPC 4571]
 gi|172048309|sp|A8YVR1|RIMP_LACH4 RecName: Full=Ribosome maturation factor rimP
 gi|160348674|gb|ABX27348.1| hypothetical protein lhv_1346 [Lactobacillus helveticus DPC 4571]
          Length = 158

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S
Sbjct: 2   SKVVDLVRPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + +   Y LE+SSPG +RP+  ++D+ R     V   +     DK+   G +
Sbjct: 62  EKLDTIDPDPLPDPYVLELSSPGAERPIKTEADWKRALNDYVHIGLYQKIDDKKVYEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              +     LE + +        ++ I    +   R
Sbjct: 122 KYYNNDEIVLEVKDK----TRRKKLTIPRKLIAKIR 153


>gi|325912470|ref|ZP_08174863.1| hypothetical protein HMPREF0522_0261 [Lactobacillus iners UPII
           143-D]
 gi|325475717|gb|EGC78890.1| hypothetical protein HMPREF0522_0261 [Lactobacillus iners UPII
           143-D]
          Length = 145

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD    + + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE 
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI 120

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
               +    + +IAI  + + + R
Sbjct: 121 ----KIKTQQQKIAIPRNMIANIR 140


>gi|171463769|ref|YP_001797882.1| protein of unknown function DUF150 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|226696205|sp|B1XV91|RIMP_POLNS RecName: Full=Ribosome maturation factor rimP
 gi|171193307|gb|ACB44268.1| protein of unknown function DUF150 [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 163

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 10/155 (6%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELSQAISPILDVE 83
             VI   +E + +  V+I    E   LL++ +E  D    +T+ DCE++S  +S  L VE
Sbjct: 4   QQVISAELENLGYSLVEIE--REAGGLLRVTIENPDYERLITVLDCEKVSHQLSYTLPVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NI   + RLE+SSPG+DRP+   +DF R+ G  V  ++ +++G+++   G++ G      
Sbjct: 62  NI--PYERLEISSPGLDRPVKSAADFQRFAGMEVDLKLRVAAGNRKNFRGELQGLLSGEL 119

Query: 144 FLEKEKRG----EKDMNELQIAISFDSLLSARLIV 174
                K G      D    Q+  S   +   RL+ 
Sbjct: 120 NSPDAKFGLVFEGADGQSSQLEFSLAEVDKTRLVP 154


>gi|309808386|ref|ZP_07702287.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
 gi|308168371|gb|EFO70488.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
          Length = 145

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD    + + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE 
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI 120

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
               +    + +IAI  + + + R
Sbjct: 121 ----KIKTQQKKIAIPRNMIANIR 140


>gi|257063652|ref|YP_003143324.1| hypothetical protein Shel_09340 [Slackia heliotrinireducens DSM
           20476]
 gi|256791305|gb|ACV21975.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
           20476]
          Length = 158

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 65/157 (41%), Gaps = 7/157 (4%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
                  ++ + ++P  ++     V I ++   K   ++++++  +  +T  D       
Sbjct: 1   MLSAKEAELLASLEPRAQQEGMEIVTIEIVGSRKAPTIRVYLDTPE-GVTFDDIAAAQVW 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           ++ I++  +   G Y LEVSSPGIDRP+     F R+ G  V          + +   ++
Sbjct: 60  VNEIVEEIDPFPGAYTLEVSSPGIDRPLRTPEHFARFAGEDVYVMTAKPFDGQSRFNAQL 119

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  E    +          +  ++AI+ + +  A +
Sbjct: 120 NGFDEESGCVLI-----GLESGEELAIALNDVKKAHV 151


>gi|317057641|ref|YP_004106108.1| hypothetical protein Rumal_3009 [Ruminococcus albus 7]
 gi|315449910|gb|ADU23474.1| protein of unknown function DUF150 [Ruminococcus albus 7]
          Length = 181

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 68/168 (40%), Gaps = 4/168 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ + QP+ +E+      +   +      L++ +++ DG +T+ DCE  ++  + IL
Sbjct: 14  ADIVAGLAQPLADELGLFLWDVRFEKEGATWYLRVLIDK-DGGVTMEDCENFTRPFNKIL 72

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMGTS 139
           D  + I   Y  E  SPG+ R + +   F    G VV   ++      +++ I  ++G  
Sbjct: 73  DEADPIPQSYVFECGSPGLGRELRKPIHFEVCIGDVVRVRLIRPDENGEREFIVGLVGYD 132

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYG 187
           E    +  +   E       +  + +     +L    +L    L    
Sbjct: 133 EEEKLIACQTLDENGDGAANVQFNLNDCAFVKLYDDGDL-EEELAGAK 179


>gi|282898606|ref|ZP_06306594.1| protein of unknown function DUF150 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196474|gb|EFA71383.1| protein of unknown function DUF150 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 164

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+  E+    V +     ++  +L++ +     + +L DCE++S+A+   
Sbjct: 16  LVPQIIDLATPLAAELGLEVVGMVFHTNQRPPILRVDIRNPQQDTSLNDCEKMSRALETS 75

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R +    +F+ + G  V          +++  G+++   
Sbjct: 76  LDAAEIILDTYVLEVSSPGISRELATDREFISFKGFPVVVSTCDPDDGEKEWKGQLIRRD 135

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           ET  +L ++ R    +  L   +  D 
Sbjct: 136 ETKIYLNQKGRVVGILRSLVTKVQLDD 162


>gi|258645577|ref|ZP_05733046.1| hypothetical protein GCWU000321_00427 [Dialister invisus DSM 15470]
 gi|260402935|gb|EEW96482.1| hypothetical protein GCWU000321_00427 [Dialister invisus DSM 15470]
          Length = 156

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 80/157 (50%), Gaps = 5/157 (3%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            G   +  +   +++P ++++    + +  + E+N +L++F++++D  + L DC+++S+ 
Sbjct: 1   MGRKEIELEAERLLEPALKQLGIELIDVEYVRERNWILRVFIDKED-GVDLNDCQQISEK 59

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
              +LD  ++I  +Y LEVSSPG+DR + +  DFLR+ G  V  ++     +    +G +
Sbjct: 60  AGELLDEADLISANYMLEVSSPGLDRVLKKDKDFLRYAGEEVDVKLFAPLEE----VGGV 115

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +     L  + +      +  I +  D +   R+
Sbjct: 116 KAFTAVLDGLSDDGQIRLIFQDKTITLGKDKISQIRI 152


>gi|254412382|ref|ZP_05026156.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196180692|gb|EDX75682.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 153

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +  PV E++    V  +     +  +L++ +   DG+  L DCE +S+A+   
Sbjct: 5   LIPQLIDLATPVAEKLGLEFVGAVFHTNRRPPVLRVDIRNRDGDTGLDDCERMSRALEAE 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  ++I   Y LE+SSPGI + +    DF+ + G  V           ++  GK++   
Sbjct: 65  LDAVDLIPDAYVLEISSPGISQELTTDRDFIAFKGFSVVVNTAEPDQGHKEWRGKLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           +T  ++ ++ R      +    + FD 
Sbjct: 125 DTRVYINQKGRAIAIPRDQVTKVQFDE 151


>gi|325957050|ref|YP_004292462.1| ribosome maturation protein RimP [Lactobacillus acidophilus 30SC]
 gi|325333615|gb|ADZ07523.1| ribosome maturation protein RimP [Lactobacillus acidophilus 30SC]
 gi|327183773|gb|AEA32220.1| ribosome maturation protein RimP [Lactobacillus amylovorus GRL
           1118]
          Length = 158

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++P+I+E     V +  ++EK    L+I+V+R+   + + +   LS+ +S
Sbjct: 2   SKVIDLVRPVVEPIIDEHGDMLVDMEYVKEKGQNYLRIYVDREPNGIDIDEIAALSELVS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG +RP+  ++D+ +     +   +     DK+   G +
Sbjct: 62  EKLDTINPDPFPEPYVLELSSPGAERPIKTEADWKKALNDYIHIGLYQKIKDKKVYEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE   +         + +    + + R
Sbjct: 122 KSYNDEEIVLEVRDK----TRRKTLTVPRKLIANIR 153


>gi|309809702|ref|ZP_07703557.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
 gi|325912543|ref|ZP_08174930.1| hypothetical protein HMPREF0523_0654 [Lactobacillus iners UPII
           60-B]
 gi|308169982|gb|EFO72020.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
 gi|325478152|gb|EGC81277.1| hypothetical protein HMPREF0523_0654 [Lactobacillus iners UPII
           60-B]
          Length = 145

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD    + + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
             Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE 
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKDDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI 120

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
               +    + +I I  + + + R
Sbjct: 121 ----KIKTQQQKITIPRNMIANIR 140


>gi|139436992|ref|ZP_01771152.1| Hypothetical protein COLAER_00126 [Collinsella aerofaciens ATCC
           25986]
 gi|133776639|gb|EBA40459.1| Hypothetical protein COLAER_00126 [Collinsella aerofaciens ATCC
           25986]
          Length = 170

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 10/162 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELS 73
                    I   ++ V  +     V + L+   K   +++ +E  +  +++L D    +
Sbjct: 7   MVKTKTEQAIIDALEAVAPQHDIDIVDVELVGATKAPCVRVRIEGAEGQSLSLNDVTANT 66

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + +  +++  + I   Y LEVSSPG+ RP+ R SDF R+ G         ++  ++K  G
Sbjct: 67  KWVGDVIEELDPISSSYTLEVSSPGMARPLRRPSDFARFVGENCEL-TSTATEGRRKYAG 125

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           KI   +ET   LE E           + + F  +   +L  T
Sbjct: 126 KIASATETSVTLELED-------GESVTLDFSDVKKCKLKPT 160


>gi|289522944|ref|ZP_06439798.1| hypothetical protein HMPREF1705_00858 [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503487|gb|EFD24651.1| hypothetical protein HMPREF1705_00858 [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 161

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 11/143 (7%)

Query: 35  EMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD-VENIIEGHYRL 92
            + +  V + L+ E   ++L+I++    G + ++DCE +S+ +   LD  E I  G Y L
Sbjct: 21  GLGYDFVGMELVHEHGRMILRIYINTP-GGINVKDCETVSRKVDKFLDSREEIFGGRYYL 79

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT-SETGFFLEKEKRG 151
           EVSSPG+D P+    DF  + G  V  +     G ++   GKI+   S     L  +   
Sbjct: 80  EVSSPGLDAPLFYIKDFKNYVGKTVRIKTHDPVGSRRNFKGKIIEILSNNDIKLGLDD-- 137

Query: 152 EKDMNELQIAISFDSLLSARLIV 174
                  +I I F ++  ARL+ 
Sbjct: 138 -----GTEILIPFQNISKARLVP 155


>gi|315038576|ref|YP_004032144.1| hypothetical protein LA2_07130 [Lactobacillus amylovorus GRL 1112]
 gi|312276709|gb|ADQ59349.1| hypothetical protein LA2_07130 [Lactobacillus amylovorus GRL 1112]
          Length = 158

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++P+I+E     V +  ++EK    L+I+V+R+   + + +   LS+ +S
Sbjct: 2   SKVIDLVRPVVEPIIDEHGDMLVDMEYVKEKGQNYLRIYVDREPNGIDIDEIAALSELVS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    +     Y LE+SSPG +RP+  ++D+ +     +   +     DK+   G +
Sbjct: 62  EKLDTINPDPFPEPYVLELSSPGAERPIKTEADWKKALNDYIHIGLYQKIMDKKVYEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE   +         + +    + + R
Sbjct: 122 KSYNDEEIVLEVRDK----TRRKTLTVPRKLIANIR 153


>gi|324991724|gb|EGC23656.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK353]
          Length = 177

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPL 82

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K     ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDKTRKK----EVEIPYSLVSKARLAV 175


>gi|323350355|ref|ZP_08086019.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           VMC66]
 gi|322123428|gb|EFX95104.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           VMC66]
 gi|327472755|gb|EGF18182.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK408]
          Length = 177

 Score = 97.8 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 9/159 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  IS
Sbjct: 23  TTIVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIIS 80

Query: 78  PILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           P+LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G +
Sbjct: 81  PLLDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTL 140

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        +E   +        ++ I +  +  ARL V
Sbjct: 141 LSFEGEVLHMEYLDK----TRRKEVEIPYSLVSKARLAV 175


>gi|282898465|ref|ZP_06306455.1| Protein of unknown function DUF150 [Raphidiopsis brookii D9]
 gi|281196631|gb|EFA71537.1| Protein of unknown function DUF150 [Raphidiopsis brookii D9]
          Length = 163

 Score = 97.8 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+  E+    V +     +   +L++ +     + +L DCE++S+A+   
Sbjct: 15  LVPQIIDLATPLAAELGLEVVGMVFHTNQCPPILRVDIRNPQQDTSLNDCEKMSRALESY 74

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R +    +F+ + G  V          +++  G+++   
Sbjct: 75  LDAAGIIPDTYVLEVSSPGISRQLETDREFISFKGFPVVVSTCDPDDGEKEWKGQLIRRD 134

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           ET  +L ++ R    +  L   +  D 
Sbjct: 135 ETKIYLNQKGRVVGILRSLVTKVQLDD 161


>gi|300173096|ref|YP_003772262.1| hypothetical protein LEGAS_0795 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887475|emb|CBL91443.1| conserved hypothetical protein [Leuconostoc gasicomitatum LMG
           18811]
          Length = 158

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 14/162 (8%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQ 74
               +   I  +I P+++        ++  +E    +L+I +++ +   +T+ D    +Q
Sbjct: 1   MVNKVEQRIIELITPIVDRRKELLWDLTYTKEGGQKVLRILLDKPNHQFITMADLTAFTQ 60

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN--GHVVACEIVLSSGDKQK 130
            ++ +LD    + I   Y L++SSPG DRP+ +   F         +   + ++   ++K
Sbjct: 61  EVNELLDTSDPDPIPEAYLLDISSPGADRPLKQPWHFKWAQDGNENILMSLFVAKNGQKK 120

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             GKI   ++ G  L  +          +I ++FD +  A L
Sbjct: 121 WQGKIKTLTDNGLVLLTD--------HGEIILNFDEIAKAVL 154


>gi|229829177|ref|ZP_04455246.1| hypothetical protein GCWU000342_01262 [Shuttleworthia satelles DSM
           14600]
 gi|229792340|gb|EEP28454.1| hypothetical protein GCWU000342_01262 [Shuttleworthia satelles DSM
           14600]
          Length = 157

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 2/149 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELS 73
           +           + + P++E+  F  V +  ++E     L+ ++++  G +T+ DC ++S
Sbjct: 1   MSRKETYEEKTEAFLLPILEKDGFSLVDVEYVKEGGQYYLRAYIDKP-GGITIDDCVDVS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++ ILD E+ I+G Y  EVSSPG+ RP+ ++ DF R     V  +   +   +++ +G
Sbjct: 60  REMNEILDREDYIDGTYTFEVSSPGLGRPIRKERDFARNLDKEVEIKSYRAIDGEKEFLG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAI 162
            +   S+    +E E+   K   E    I
Sbjct: 120 LLRDYSKADVTIESEEGIRKICREDIALI 148


>gi|55820433|ref|YP_138875.1| hypothetical protein stu0340 [Streptococcus thermophilus LMG 18311]
 gi|55822317|ref|YP_140758.1| hypothetical protein str0340 [Streptococcus thermophilus CNRZ1066]
 gi|81559802|sp|Q5M1C3|RIMP_STRT1 RecName: Full=Ribosome maturation factor rimP
 gi|81560972|sp|Q5M5V9|RIMP_STRT2 RecName: Full=Ribosome maturation factor rimP
 gi|55736418|gb|AAV60060.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55738302|gb|AAV61943.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 163

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 71/165 (43%), Gaps = 9/165 (5%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEE 71
             +     +   +++V+ P I +  +  V I   +   + +L + +++  G +T+ D  +
Sbjct: 3   KEVIMSQKIIDLVTAVVAPAIPD-PYELVDIEYEKIGSDYILSVLIDKP-GGITVEDTAD 60

Query: 72  LSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           L++ ISP+LD    +     Y LEVSSPG++RP+  K       G  +   +  +    +
Sbjct: 61  LTEIISPLLDTIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSLYKAIDKIK 120

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              G ++        ++   +         + I + ++  ARL V
Sbjct: 121 IFQGDLLAFDGETLTIDYLDK----TRHKTVEIPYQTVAKARLAV 161


>gi|25010486|ref|NP_734881.1| hypothetical protein gbs0413 [Streptococcus agalactiae NEM316]
 gi|50403657|sp|P62599|RIMP_STRA5 RecName: Full=Ribosome maturation factor rimP
 gi|50403658|sp|P62600|RIMP_STRA3 RecName: Full=Ribosome maturation factor rimP
 gi|23094839|emb|CAD46057.1| unknown [Streptococcus agalactiae NEM316]
          Length = 159

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 69/163 (42%), Gaps = 9/163 (5%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +  +  +   ++ V+ P I+   F  V +   +   + +L I +++  G +T+ D  +L+
Sbjct: 1   MIANQTIVDIVTQVVTPAIQA-PFELVDVEYEKMGGDYVLSILIDKP-GGITVEDTAQLT 58

Query: 74  QAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
             +SP+LD    +     Y LEVSSPG++RP+          G  +   +  S    +  
Sbjct: 59  DVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIF 118

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G ++        ++   +         + I + ++  ARL V
Sbjct: 119 EGDLLSFDGETLTIDYMDK----TRHKTVDIPYQTVAKARLAV 157


>gi|224367579|ref|YP_002601742.1| hypothetical protein HRM2_04640 [Desulfobacterium autotrophicum
           HRM2]
 gi|259585763|sp|C0QHM0|RIMP_DESAH RecName: Full=Ribosome maturation factor rimP
 gi|223690295|gb|ACN13578.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 155

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I S+ +P+     F  V +  + ++  ++++I++++  G +TL DC  +++ +  I
Sbjct: 11  IVTAIESIAEPLCIAEGFELVHVECVSDQGGMIVRIYLDKP-GGITLDDCVHMTRHLGDI 69

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +DVE      YRLE+SSPG  RP+ + +DF R+ G  V  E V   G + K  G +    
Sbjct: 70  IDVELEEISAYRLEISSPGAKRPLKKLADFERFLGSRVKVEAVEPIGGRLKFTGILSKVQ 129

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +           E  +N   +   F+ +  +RL 
Sbjct: 130 DGC--------VEVVVNNEPVVFHFEQISKSRLA 155


>gi|297537314|ref|YP_003673083.1| hypothetical protein M301_0118 [Methylotenera sp. 301]
 gi|297256661|gb|ADI28506.1| protein of unknown function DUF150 [Methylotenera sp. 301]
          Length = 161

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 80/166 (48%), Gaps = 26/166 (15%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-----NMTLRDCEELSQAIS 77
            D+ ++I+  + ++ +  V + +   +  LL++F+++ +      ++ + DC  +S  + 
Sbjct: 2   QDLHTLIEKSVSQLGYELVDLEISN-RGKLLRVFIDKLNPADIKDSVNIDDCSLVSNQLG 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---------- 127
            +L VEN I  + RLEVSSPG+DR + +++DF+R+ G     ++ +   D          
Sbjct: 61  NLLAVENDI-DYDRLEVSSPGMDRVLKKEADFVRFIGERAQIKLRVGIKDESVTATETTL 119

Query: 128 -KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            ++  +G I G  +    +E +    K         +  ++  ARL
Sbjct: 120 PRKTFLGFIKGVQDGLVLIEFDGVVYKM--------ALSNIDKARL 157


>gi|307297717|ref|ZP_07577523.1| protein of unknown function DUF150 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916977|gb|EFN47359.1| protein of unknown function DUF150 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 177

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             L  ++  +   V   + +    + L    K  L++I +++ DG +++ DCE  S    
Sbjct: 27  EDLKKELFELANEVASNLGYSIYDLGLGRRGKKRLVKITIDKLDGYVSISDCESFSADFG 86

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  +++   Y L V SPG++R +    D++R+ G      +         LIGKI+ 
Sbjct: 87  RALDSADLVPFSYDLVVESPGLERALRDLKDYVRFTGEKAKVILKEPIEGVSVLIGKIIS 146

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E  + G+      +IA  F ++  A L +
Sbjct: 147 CENDVVTVESSENGK------EIAFHFSNVKRANLKL 177


>gi|326316664|ref|YP_004234336.1| ribosome maturation factor rimP [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373500|gb|ADX45769.1| Ribosome maturation factor rimP [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 201

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 41/187 (21%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-----------------RDDGNMTLR 67
           +  +++  +  + +  V+I        LL+I ++                   +  +T+ 
Sbjct: 3   LQQIVEQTVAGLGYDLVEIERSAGG--LLRITIDLPWQPPVEGAASDAAPAGPEAFVTVE 60

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG- 126
           DCE++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G VV   +    G 
Sbjct: 61  DCEKVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRHEQDFQRFAGEVVDITLKAPIGD 118

Query: 127 --------DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ-----------IAISFDSL 167
                   +++K  G +  T   G+ +           +             +  + D L
Sbjct: 119 AAAGQVNANRKKFRGTLERTEAGGWQIVWSDEPPPKPGQKVSKKRVPPPLQALGFTLDEL 178

Query: 168 LSARLIV 174
             ARL  
Sbjct: 179 RDARLAP 185


>gi|222099942|ref|YP_002534510.1| hypothetical protein CTN_0968 [Thermotoga neapolitana DSM 4359]
 gi|254807290|sp|B9K861|RIMP_THENN RecName: Full=Ribosome maturation factor rimP
 gi|221572332|gb|ACM23144.1| Hypothetical Protein CTN_0968 [Thermotoga neapolitana DSM 4359]
          Length = 150

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 13/158 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   +    + + E+       I    E +  +L++ ++   G +++RDCE  S+
Sbjct: 1   MFEEMIVEKVRKEAERIAEKQGLEIFDIQYRRESRGWVLRVVIDNPVGYVSVRDCELFSR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +   LD E++IE  Y LEVSSPG+DRP+    D+ R+ G +            +  IG+
Sbjct: 61  ELERFLDREDLIEHSYTLEVSSPGLDRPLRGPKDYQRFTGKLAKIITKDG----KTFIGR 116

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           I    +    +  EK            I  + +  A L
Sbjct: 117 IESFVDGIVTISDEKGKH--------EIDIEDVRKANL 146


>gi|154249423|ref|YP_001410248.1| hypothetical protein Fnod_0736 [Fervidobacterium nodosum Rt17-B1]
 gi|259585774|sp|A7HL08|RIMP_FERNB RecName: Full=Ribosome maturation factor rimP
 gi|154153359|gb|ABS60591.1| protein of unknown function DUF150 [Fervidobacterium nodosum
           Rt17-B1]
          Length = 152

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 13/158 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   + ++ +P++  M      +   ++    +L I +++ D  ++ RDCE +S 
Sbjct: 3   LSQKEIIERVRAIAEPIVTSMGLELFDVKYRIQAGKWVLSIIIDKLDDYVSTRDCELVSY 62

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I  +LD  + I G Y LEVSSPG+DRP+ +  DF R+ G +      +    K+   G 
Sbjct: 63  EIEKVLDSHDFIPGRYYLEVSSPGLDRPLKKIEDFRRFVGKL------VKVKTKKTYRGY 116

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           I+  +         K     ++   I I +D + SA L
Sbjct: 117 IVDVNMET------KEIILRVDNENITIKYDDVKSANL 148


>gi|319941975|ref|ZP_08016296.1| ribosome maturation factor rimP [Sutterella wadsworthensis 3_1_45B]
 gi|319804628|gb|EFW01498.1| ribosome maturation factor rimP [Sutterella wadsworthensis 3_1_45B]
          Length = 186

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 30/177 (16%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S++++  +E + +  V +  L+   + + I +ER DG ++L DCE +S  ++ +  VE+
Sbjct: 7   LSALVKKTVEGLGYELVDVERLQRGLVRVTIDIER-DGGISLEDCERVSDQLTHLFTVED 65

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-------DKQKLIGKIMG 137
           +   + RLEVSSPG++RP+ R  D+ R+ G +   E+             ++KL G+I+G
Sbjct: 66  V--SYERLEVSSPGVERPLKRARDWERFTGELAWVELFAPLKAEGFPEAGRRKLEGRIVG 123

Query: 138 TSETG--------------------FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            S                         L   K+   +   +++      +  A L+V
Sbjct: 124 ISGESGAEQIEFDYFEVDIARTPRAAALRARKKQTVEAAPVRVVFPLSEVEQAHLLV 180


>gi|149926273|ref|ZP_01914535.1| hypothetical protein LMED105_02033 [Limnobacter sp. MED105]
 gi|149825091|gb|EDM84303.1| hypothetical protein LMED105_02033 [Limnobacter sp. MED105]
          Length = 171

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 6/143 (4%)

Query: 32  VIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           VI  +      I    E N LL+I ++     +T+ DCE++S  ++ +  VEN+   + R
Sbjct: 31  VISSLGLEVADIE--REGNGLLRIMIDSP-TGVTVEDCEKVSHQLTHLFTVENV--NYER 85

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           LE+SSPG+DR + RK DF R+    V+ +   +  ++++  G +    E  + +     G
Sbjct: 86  LEISSPGVDRVLRRKKDFERFLDQEVSLKFKRAINNQKQFKGVLQKGKEQAWGVLVTPDG 145

Query: 152 EKDMNELQIAISFDSLLSARLIV 174
            K+     +      L  ARL+ 
Sbjct: 146 -KNAEPYLLDFEITDLAGARLVP 167


>gi|325695171|gb|EGD37072.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK150]
 gi|328944977|gb|EGG39134.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1087]
 gi|332358011|gb|EGJ35844.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1056]
          Length = 177

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPL 82

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLSDAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +        ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDK----TRRKEVEIPYSLVSKARLAV 175


>gi|327467114|gb|EGF12624.1| hypothetical protein HMPREF9386_2224 [Streptococcus sanguinis
           SK330]
          Length = 177

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILAH-YELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPL 82

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADTVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +        ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDK----TRRKEVEIPYSLVSKARLAV 175


>gi|320547938|ref|ZP_08042221.1| protein of hypothetical function DUF150 [Streptococcus equinus ATCC
           9812]
 gi|320447478|gb|EFW88238.1| protein of hypothetical function DUF150 [Streptococcus equinus ATCC
           9812]
          Length = 150

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 9/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD-- 81
           ++ V+ P I+E  F  V +   +   + +L I +++  G +T+ D  +L++ ISP+LD  
Sbjct: 2   VTEVVAPAIKE-PFELVDVEYGKMGSDYVLSILIDKP-GGITVNDTADLTEIISPLLDAI 59

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEVSSPG++RP+  K    +  G  V   +  +    +   G ++     
Sbjct: 60  KPDPFPEQYMLEVSSPGLERPLKTKEALEKAVGSYVNVSLYKAIDKVKVFQGDLVAFDGE 119

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++   +  K      + I + ++  ARL V
Sbjct: 120 TLTIDYLDKTRKK----TVEIPYSTVAKARLAV 148


>gi|307155147|ref|YP_003890531.1| hypothetical protein Cyan7822_5377 [Cyanothece sp. PCC 7822]
 gi|306985375|gb|ADN17256.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7822]
          Length = 153

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I  +  P+ E++    V++     ++  +L++ +     + +L DCE++S+++   
Sbjct: 5   VIPQIIDLATPIAEQLGLEIVEVVFQTNKRPPVLRVDIRNKSSDTSLNDCEQMSRSLEAN 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   +I G Y LE+SSPGI R +    +F+ + G  +  +      ++++  GK+ G  
Sbjct: 65  LDATELIPGSYVLEISSPGISRQLNSDREFIVFKGFDIIVKTDTPFENQKEWRGKLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L K+ R         IAI    +   +L
Sbjct: 125 EQAVYLNKKGR--------VIAIPRQLITKVQL 149


>gi|125718694|ref|YP_001035827.1| hypothetical protein SSA_1901 [Streptococcus sanguinis SK36]
 gi|259595394|sp|A3CQ22|RIMP_STRSV RecName: Full=Ribosome maturation factor rimP
 gi|125498611|gb|ABN45277.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
 gi|325688732|gb|EGD30741.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK115]
 gi|332364629|gb|EGJ42398.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1059]
          Length = 177

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPL 82

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +        ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDK----TRRKEVEIPYSLVSKARLAV 175


>gi|75908092|ref|YP_322388.1| hypothetical protein Ava_1871 [Anabaena variabilis ATCC 29413]
 gi|91208393|sp|Q3MBZ3|RIMP_ANAVT RecName: Full=Ribosome maturation factor rimP
 gi|75701817|gb|ABA21493.1| Protein of unknown function DUF150 [Anabaena variabilis ATCC 29413]
          Length = 153

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 9/146 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ +  PV E++    V I     ++  +L++ +     +  L DCE +S+A+   LD  
Sbjct: 9   ITDLAIPVAEQLGLEVVGIVFHTNQRPPVLRVDIRNPQQDTGLDDCERMSRALEAALDAT 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            II   Y LEVSSPGI R +V   +F+ + G  V          +Q+ IG+++   ET  
Sbjct: 69  EIIPDAYVLEVSSPGISRQLVTDREFISFKGFPVIVSTSPPHEGQQEWIGQLIRRDETKV 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLS 169
           ++ ++ R         I I    +  
Sbjct: 129 YINQKGR--------VIEIPRSLITR 146


>gi|319939748|ref|ZP_08014105.1| ribosome maturation factor rimP [Streptococcus anginosus 1_2_62CV]
 gi|319811086|gb|EFW07397.1| ribosome maturation factor rimP [Streptococcus anginosus 1_2_62CV]
          Length = 162

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  V++PVI+E  +  V I   +   + +L IFV++  G +T+ D  +L+  ISP+
Sbjct: 10  IVELVKEVVEPVIQE-PYELVNIDYGKMGSDHVLSIFVDKS-GGITVNDTADLTDIISPL 67

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +    +   G ++ 
Sbjct: 68  LDTIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGQYIHVSLYQAVDKSKTFEGTLLS 127

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +  K +    + I +  +  ARL V
Sbjct: 128 FEEDHLTMEYMDKTRKKV----VQIPYKLVSKARLAV 160


>gi|327462401|gb|EGF08726.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1057]
          Length = 177

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPL 82

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +        ++ I +  +  ARL V
Sbjct: 143 FEEEVLHMEYLDK----TRRKEVEIPYSLVSKARLAV 175


>gi|241895993|ref|ZP_04783289.1| hypothetical protein of function DUF150 [Weissella
           paramesenteroides ATCC 33313]
 gi|241870724|gb|EER74475.1| hypothetical protein of function DUF150 [Weissella
           paramesenteroides ATCC 33313]
          Length = 235

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 80/172 (46%), Gaps = 8/172 (4%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDC 69
           +E R+     +  ++ ++++P++ +  F    +   ++  + +L++ V+R DG + + D 
Sbjct: 2   HEGRVRM-AKVTENVQAILKPILAKKGFDLWDVLYEKQDSDFVLRVLVDRVDGEINMDDL 60

Query: 70  EELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
             L++ IS  LD+   +     Y L+VSSPG DR + +  +F+   G  +   +      
Sbjct: 61  VMLTEVISDELDMITPDPFPQAYLLDVSSPGADRELQQPGNFVWAVGKFIEVILNNPVAG 120

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
            +K  G+++   +    ++   +         I I  D++  A L V+ + +
Sbjct: 121 LEKFTGQLVSFLDDKLTIDVALK----TKHQLIEIDLDNIQKANLSVSQDRI 168


>gi|290581069|ref|YP_003485461.1| hypothetical protein SmuNN2025_1543 [Streptococcus mutans NN2025]
 gi|254997968|dbj|BAH88569.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 163

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 11/166 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEE---MSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCE 70
           +  +      +  +++PV+       F  V I   +   N +L I V++ +  +T+ D  
Sbjct: 1   MCKEGNTIATLVDIVRPVVAPVIPKPFELVDIEYEKLGGNYVLSILVDKPE-GITVEDTA 59

Query: 71  ELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           +L+  ISP+LD    +     Y LE+SSPG++RP+      +   GH +   +  +    
Sbjct: 60  DLTDIISPLLDTIKPDPFPEQYMLEISSPGLERPLKTAQSLMNAVGHYINVSLYQAIDKV 119

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   G +         +    +      +  + I +  +  ARL V
Sbjct: 120 KVFEGDLTAFDGETLTMTYLDK----TQQKTVTIPYKMVAKARLAV 161


>gi|116627257|ref|YP_819876.1| hypothetical protein STER_0379 [Streptococcus thermophilus LMD-9]
 gi|122268140|sp|Q03M92|RIMP_STRTD RecName: Full=Ribosome maturation factor rimP
 gi|116100534|gb|ABJ65680.1| Uncharacterized protein conserved in bacteria [Streptococcus
           thermophilus LMD-9]
 gi|312277741|gb|ADQ62398.1| Ribosome maturation factor rimP [Streptococcus thermophilus ND03]
          Length = 157

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 70/161 (43%), Gaps = 9/161 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +++V+ P I +  +  V I   +   + +L + +++  G +T+ D  +L++ 
Sbjct: 1   MSQKIIDLVTAVVAPAIPD-PYELVDIEYEKIGSDYILSVLIDKP-GGITVEDTADLTEI 58

Query: 76  ISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           ISP+LD    +     Y LEVSSPG++RP+  K       G  +   +  +    +   G
Sbjct: 59  ISPLLDTIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSLYKAIDKIKIFQG 118

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++        ++   +         + I + ++  ARL V
Sbjct: 119 DLLAFDGETLTIDYLDK----TRHKTVEIPYQTVAKARLAV 155


>gi|228476573|ref|ZP_04061255.1| conserved hypothetical protein [Streptococcus salivarius SK126]
 gi|228251768|gb|EEK10833.1| conserved hypothetical protein [Streptococcus salivarius SK126]
          Length = 157

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 9/161 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +++V+ P I E  +  V I   +   + +L + +++  G +T+ D  +L++ 
Sbjct: 1   MSQKIIDLVTAVVAPAIPE-PYELVDIEYEKLGGDYVLSVLIDKP-GGITVEDTADLTEI 58

Query: 76  ISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           ISP+LD    +     Y LEVSSPG++RP+  K       G  +   +  +    +   G
Sbjct: 59  ISPLLDTIQPDPFPDQYMLEVSSPGLERPLKTKEALTNAVGQYINVSLYKAIDKIKIFQG 118

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++        ++   +         + I + ++  ARL V
Sbjct: 119 DLVAFDGETLTIDYLDK----TRHKTVEIPYQTVAKARLAV 155


>gi|119511040|ref|ZP_01630160.1| hypothetical protein N9414_09856 [Nodularia spumigena CCY9414]
 gi|119464291|gb|EAW45208.1| hypothetical protein N9414_09856 [Nodularia spumigena CCY9414]
          Length = 153

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 12/158 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV  E+    V I     ++  +L++ +     +  L DCE +S+A+   
Sbjct: 5   LVPQIIDLATPVAAELGLEVVGIVFHTNQRPPVLRVDIRNSQQDTGLNDCERMSRALEAS 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R ++   +F+ + G  V          +Q+ IG+++   
Sbjct: 65  LDAAEIIPDAYVLEVSSPGISRQLITDREFISFKGFPVIISTSQPYDGQQEWIGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
           ET  +L ++ R         I I    +     ++ DE
Sbjct: 125 ETTVYLNQKGRI--------IEIPRTLITR---VLLDE 151


>gi|302335789|ref|YP_003800996.1| protein of unknown function DUF150 [Olsenella uli DSM 7084]
 gi|301319629|gb|ADK68116.1| protein of unknown function DUF150 [Olsenella uli DSM 7084]
          Length = 157

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 74/166 (44%), Gaps = 13/166 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN---MTLRDCEE 71
                L   + + ++          V + ++   K  ++++ ++  D     ++L +   
Sbjct: 1   MATTDLERQLVTALEDAARSHGIDVVDVEVVGSSKAPVVRVRIDHADEGVPTISLDEVAA 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            S  I+ +LD  + I G Y LEVSSPG+ RP+ ++ DF R+ G  V+ +   +   +++ 
Sbjct: 61  QSGWINEVLDDADPIAGSYVLEVSSPGLARPLRKERDFERFAGSDVSLKTF-AREGRRRF 119

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            G+++G       +E          E +++++ D + S  +    +
Sbjct: 120 TGRLLGVEGGRVVVEC--------GEERVSLALDDIKSCHVRPDFD 157


>gi|218247499|ref|YP_002372870.1| hypothetical protein PCC8801_2713 [Cyanothece sp. PCC 8801]
 gi|257061165|ref|YP_003139053.1| hypothetical protein Cyan8802_3390 [Cyanothece sp. PCC 8802]
 gi|226701501|sp|B7K5I1|RIMP_CYAP8 RecName: Full=Ribosome maturation factor rimP
 gi|218167977|gb|ACK66714.1| protein of unknown function DUF150 [Cyanothece sp. PCC 8801]
 gi|256591331|gb|ACV02218.1| protein of unknown function DUF150 [Cyanothece sp. PCC 8802]
          Length = 153

 Score = 96.6 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I ++  P+ E+     V +     ++  +L++ +    G  +L DCE +S+A+  +
Sbjct: 5   LIPQIINLATPIAEDRGLEVVDVVFQTNKRPPVLRVDIRNSQGETSLDDCEAVSRALEAV 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   ++ G Y LE+SSPGI R +    +F+ + G  V     +   D ++  G++ G  
Sbjct: 65  LDESQVMGGSYVLEISSPGISRQLHSDREFISFKGFAVIVTTEIPYLDHKEWRGQLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E+  ++ ++ R         IAI  + +   +L
Sbjct: 125 ESAVYINQKGRA--------IAIPRELIAKVQL 149


>gi|284052677|ref|ZP_06382887.1| hypothetical protein AplaP_14508 [Arthrospira platensis str.
           Paraca]
 gi|291568134|dbj|BAI90406.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 153

 Score = 96.6 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV + +    V  +    +K  +L++ +   + + +L DCE +S+A+   
Sbjct: 5   LIPKIIDLATPVAKALGLEVVGAMFYTNQKPPVLRVDIRNLEQDTSLEDCERMSRALEEQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  ++I   Y LEVSSPG+ R +    DF+ + G  V           ++  GK++G  
Sbjct: 65  LDAVDVIPDAYILEVSSPGVSRSLSCDRDFISFKGFPVTVTTSEPYKGHKQQTGKLVGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           E    + ++ R     N L   +  + 
Sbjct: 125 EMAVHINQKGRQISIPNSLITQVLLEE 151


>gi|296111950|ref|YP_003622332.1| hypothetical protein LKI_09120 [Leuconostoc kimchii IMSNU 11154]
 gi|295833482|gb|ADG41363.1| hypothetical protein LKI_09120 [Leuconostoc kimchii IMSNU 11154]
          Length = 158

 Score = 96.6 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 14/162 (8%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDG-NMTLRDCEELSQ 74
               +   I+ +I P++E+       +S   E    +L+I +++ +  ++T+ D  + +Q
Sbjct: 1   MANKVEQKITVLITPIVEKRDKLLWDLSYTREGGQKVLRILLDKPNHESITMTDLTDFTQ 60

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN--GHVVACEIVLSSGDKQK 130
            ++ +LD    + I   Y L++SSPG DRP+++   F         V   + ++   ++K
Sbjct: 61  EVNELLDTTDPDPIPEPYLLDISSPGADRPLIKPWHFKWAQESEEEVLISLFVAKNGQKK 120

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             G I   ++ G  L  E          ++ ++FD +  A L
Sbjct: 121 WQGNISSLTDDGLVLATEAD--------ELVLNFDEIAKAVL 154


>gi|296129354|ref|YP_003636604.1| protein of unknown function DUF150 [Cellulomonas flavigena DSM
           20109]
 gi|296021169|gb|ADG74405.1| protein of unknown function DUF150 [Cellulomonas flavigena DSM
           20109]
          Length = 186

 Score = 96.6 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 6/182 (3%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGN---MTLRDCEE 71
            G    A  +  V++  +         + +       + ++ V+  D +   + L    +
Sbjct: 1   MGAPATAPRVREVVETAVTGAGLLLDGLEVAGSGRSTVVRVTVDLADDDPGTLDLDRVGD 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +++A+S  LD  +++ G Y LEV SPG +RP+     + R  G  V       +    +L
Sbjct: 61  VTRAVSDALDAADVLPGAYTLEVGSPGAERPLTLARHWRRARGRTVLVRRTDGTTLTGRL 120

Query: 132 IGKIMGTSETGFFLEKEK--RGEKDMNELQIAISFDSLLSARLIVTDELLRASLNNYGSY 189
            G   G +     +      +G + +    + +++D +  AR+ V    +R +    G  
Sbjct: 121 DGVADGDAPELVVVPVTDPGKGRRPVVGAPVTLAWDDVRDARVQVDLAAVREADEEAGPQ 180

Query: 190 AG 191
            G
Sbjct: 181 DG 182


>gi|217077787|ref|YP_002335505.1| hypothetical protein THA_1728 [Thermosipho africanus TCF52B]
 gi|259645125|sp|B7IDT7|RIMP_THEAB RecName: Full=Ribosome maturation factor rimP
 gi|217037642|gb|ACJ76164.1| hypothetical protein THA_1728 [Thermosipho africanus TCF52B]
          Length = 148

 Score = 96.6 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 13/155 (8%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  + +   ++ +     I    +     L+I ++     ++ +DCE +S+ + 
Sbjct: 2   KEIVSKVKEIAESACKKYNLELFDIKYYNKSGKWFLEIVIDNPLDYVSTKDCENISREVE 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  +II   Y L VSSPG+DRP+    DF R+  + V  ++       + +IG I  
Sbjct: 62  FQLDKLDIIPQRYYLTVSSPGLDRPLRSIDDFKRFINNKVKIKLEN-----ETIIGYIKD 116

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             ++  FLE+  +  K        I ++ +  A L
Sbjct: 117 VKDSVIFLEENNKKIK-------EIKYNQIKKANL 144


>gi|288904584|ref|YP_003429805.1| hypothetical protein GALLO_0368 [Streptococcus gallolyticus UCN34]
 gi|306830579|ref|ZP_07463746.1| protein of hypothetical function DUF150 [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325977558|ref|YP_004287274.1| hypothetical protein SGGBAA2069_c03580 [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288731309|emb|CBI12860.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
 gi|304427297|gb|EFM30402.1| protein of hypothetical function DUF150 [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325177486|emb|CBZ47530.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 177

 Score = 96.6 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   ++ V+ P I+E  F  V +   +   + +L I +++ +  +T+ D  EL++ ISP+
Sbjct: 25  IINVVTEVVAPAIKE-PFELVDVEYEKMGSDYVLSILIDKPE-GITVDDTAELTEIISPL 82

Query: 80  LD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEVSSPG++RP+  K    +  G  V   +  +    +   G ++ 
Sbjct: 83  LDAIKPDPFPEQYMLEVSSPGLERPLKTKEALEKAVGSYVNVSLYKAIDKVKVFQGDLVA 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  ++   +      +  + I + ++  ARL V
Sbjct: 143 FDGDTLTIDYLDK----TRKKTVEIPYSTVAKARLAV 175


>gi|83816343|ref|YP_445896.1| hypothetical protein SRU_1779 [Salinibacter ruber DSM 13855]
 gi|83757737|gb|ABC45850.1| Uncharacterized BCR, YhbC family COG0779 [Salinibacter ruber DSM
           13855]
          Length = 217

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 79/159 (49%), Gaps = 10/159 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               LA  +S + + VI    +  V + +   K   +++++++ ++  +   D   +S+ 
Sbjct: 66  TQQHLADRVSGLTEEVIVGTDYFLVDVEVRGHKGTRVVEVYIDSEEE-VGHDDLALISKE 124

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I  +LDVE++++G Y+LE+SSPGI RP+   + + +  G  +      S GD++ ++G +
Sbjct: 125 IGFLLDVEDVVDGSYKLELSSPGIKRPLTMPAQYRKNVGRTLRVR-FESDGDEEIVVGDL 183

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +    LE         +  ++ + + ++  AR+ +
Sbjct: 184 TDADDEEIELELP-------SAERLQLPYTTITQARIEL 215


>gi|324992029|gb|EGC23951.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK405]
 gi|324994122|gb|EGC26036.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK678]
 gi|325697659|gb|EGD39544.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK160]
 gi|327490546|gb|EGF22327.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1058]
          Length = 177

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILP-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPL 82

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E    +E   +        ++ I +  +  ARL V
Sbjct: 143 FAEDVLHMEYLDK----TRRKEVEIPYSLVSKARLAV 175


>gi|322373935|ref|ZP_08048470.1| SP14.3 protein [Streptococcus sp. C150]
 gi|321277307|gb|EFX54377.1| SP14.3 protein [Streptococcus sp. C150]
          Length = 157

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 9/161 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +++V+ P I E  +  V I   +   + +L + +++  G +T+ D  +L++ 
Sbjct: 1   MSQKIVDLVTAVVAPAIPE-PYELVDIEYEKLGSDYVLSVLIDKP-GGITVEDTADLTEI 58

Query: 76  ISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           ISP+LD    +     Y LEVSSPG++RP+  K       G  +   +  +    +   G
Sbjct: 59  ISPLLDTIQPDPFPDQYMLEVSSPGLERPLKTKEALTNAVGQYINVSLYKAIDKIKIFQG 118

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++        ++   +         + I + ++  ARL V
Sbjct: 119 DLVAFDGETLTIDYLDK----TRHKTVEIPYQTVAKARLAV 155


>gi|332362936|gb|EGJ40725.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK49]
          Length = 149

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 9/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+LD  
Sbjct: 1   MREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPLLDQI 58

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++   E 
Sbjct: 59  KPDPFPEQYFLEVTSPGLERPLKTKEQLSNAVGSYIHVSLYKAVDKQKVFEGTLLSFEED 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              +E   +        ++ I +  +  ARL V
Sbjct: 119 VLHMEYLDK----TRRKEVEIPYSLVSKARLAV 147


>gi|315652149|ref|ZP_07905147.1| protein of hypothetical function DUF150 [Eubacterium saburreum DSM
           3986]
 gi|315485641|gb|EFU76025.1| protein of hypothetical function DUF150 [Eubacterium saburreum DSM
           3986]
          Length = 166

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 2/141 (1%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
                 ++ +  E+ F  V I  ++E     L+++ +  DG + + DC E+S+ +S  LD
Sbjct: 21  KRTEEFLEKLSSELKFELVDIEFVKEAGEYYLRVYCDM-DGGIGIEDCAEISRHLSDWLD 79

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            E+ I+  Y LEVSSPG+ R + +  DFLR  G  V  ++  +    +   G +      
Sbjct: 80  EEDFIDEGYILEVSSPGLGRTLKKDKDFLRELGKEVELKLYKARDGVKDFEGVLKSFDGE 139

Query: 142 GFFLEKEKRGEKDMNELQIAI 162
              +E E + E    +    I
Sbjct: 140 NITVETEVKDEVFTKKEIANI 160


>gi|309804399|ref|ZP_07698473.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
 gi|308163514|gb|EFO65787.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
          Length = 144

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 65/143 (45%), Gaps = 7/143 (4%)

Query: 32  VIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEG 88
           ++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD    + +  
Sbjct: 1   LVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLPD 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE  
Sbjct: 61  PYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI- 119

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
              +      +IAI  + + + R
Sbjct: 120 ---KIKTQPKKIAIPRNMIANIR 139


>gi|239617902|ref|YP_002941224.1| protein of unknown function DUF150 [Kosmotoga olearia TBF 19.5.1]
 gi|239506733|gb|ACR80220.1| protein of unknown function DUF150 [Kosmotoga olearia TBF 19.5.1]
          Length = 167

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 72/153 (47%), Gaps = 7/153 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  + + V EE+ +   +++  + +   +L + ++++DG +++ DCE  S+A    
Sbjct: 17  LTEKLRKLAEEVAEELGYEIYKLTFGKGRRRAVLTVAIDKEDGYISISDCENFSRAFEKK 76

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y L + SPG +R + +  DF+R+ G  V   +     ++  L+G+++  +
Sbjct: 77  LDETEIISSSYNLVIESPGAERELRKPGDFMRFTGKSVKIVLKEPLENRSVLVGQLINAN 136

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E    + +        +     + +  +  A L
Sbjct: 137 EDLVTIIEAD------SNRTFEVEYRMIKKANL 163


>gi|227904179|ref|ZP_04021984.1| protein of hypothetical function DUF150 [Lactobacillus acidophilus
           ATCC 4796]
 gi|227868198|gb|EEJ75619.1| protein of hypothetical function DUF150 [Lactobacillus acidophilus
           ATCC 4796]
          Length = 172

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++ +I+E     V +  ++EK+   L+I+V+R+   + + +   LS+ IS
Sbjct: 16  SKVVNLVRPVVESIIDEHGDMLVNMEYIKEKSQNYLRIYVDREPNGIDIDEIAVLSELIS 75

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + +   Y LE+SSPG +RP+  K+D+ +     +   +     DK+   G +
Sbjct: 76  EKLDTLDPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIEDKKMYEGTL 135

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE + +         + +    + + R
Sbjct: 136 KSYNDDEIILEVKDK----TRRKTLTVPRKLIANIR 167


>gi|256843342|ref|ZP_05548830.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256849839|ref|ZP_05555270.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262046915|ref|ZP_06019875.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
 gi|293381213|ref|ZP_06627221.1| SP14.3 family protein [Lactobacillus crispatus 214-1]
 gi|295693138|ref|YP_003601748.1| hypothetical protein LCRIS_01276 [Lactobacillus crispatus ST1]
 gi|312978243|ref|ZP_07789987.1| SP14.3 protein [Lactobacillus crispatus CTV-05]
 gi|256614762|gb|EEU19963.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256713328|gb|EEU28318.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260572897|gb|EEX29457.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
 gi|290922253|gb|EFD99247.1| SP14.3 family protein [Lactobacillus crispatus 214-1]
 gi|295031244|emb|CBL50723.1| UPF0090 protein [Lactobacillus crispatus ST1]
 gi|310894961|gb|EFQ44031.1| SP14.3 protein [Lactobacillus crispatus CTV-05]
          Length = 158

 Score = 95.8 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++ +I+E     V +  ++EK    L+I+V+R    + + +   LS+ +S
Sbjct: 2   SKVIDSVRPVVETIIDEHGDMLVDMEYVKEKGQNYLRIYVDRQPNGIDIDEIAALSELVS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + +   Y LE+SSPG +RP+  K+D+ +     +   +     +K+   G +
Sbjct: 62  EKLDALDPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIENKKMYEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE + +         + +    + + R
Sbjct: 122 KSYNDDEVVLEIKDK----TRRKTLTVPRKLIANIR 153


>gi|210622609|ref|ZP_03293269.1| hypothetical protein CLOHIR_01217 [Clostridium hiranonis DSM 13275]
 gi|210154110|gb|EEA85116.1| hypothetical protein CLOHIR_01217 [Clostridium hiranonis DSM 13275]
          Length = 154

 Score = 95.8 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 78/148 (52%), Gaps = 2/148 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQ 74
                +   +  ++  + +E  + +V +  ++E     L++ V++ +G ++L +CEE+S+
Sbjct: 1   MKKSEIVDRVEKMVTAITDEKGYETVDVEYVKEAGQFYLRVVVDK-EGGISLNECEEVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +SP LD  + IE +Y LEVSSPGIDR + R  +F+++ G  V  ++  +    ++  G+
Sbjct: 60  ELSPKLDENDFIEENYYLEVSSPGIDRALKRDKEFVKYKGRDVEIKLYKAIDGVKQFEGE 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAI 162
           ++G  E    +      E   N   +AI
Sbjct: 120 LVGLDEENNIVVIINNEEMKFNRKDVAI 147


>gi|302874659|ref|YP_003843292.1| hypothetical protein Clocel_1784 [Clostridium cellulovorans 743B]
 gi|307690727|ref|ZP_07633173.1| hypothetical protein Ccel74_21406 [Clostridium cellulovorans 743B]
 gi|302577516|gb|ADL51528.1| protein of unknown function DUF150 [Clostridium cellulovorans 743B]
          Length = 153

 Score = 95.8 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 2/143 (1%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L  +I S +  VI+++ +    I   +E     L+ ++E  +  + L DCE++S+
Sbjct: 1   MDKEKLLIEIESRMGSVIKDLGYDLYHIEYVVEGGENFLRFYIEN-EAGIGLNDCEKVSR 59

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS I+DVE+ I+ +Y LEVSSPG+ R + +   F R+ G  V  ++      ++K    
Sbjct: 60  AISDIIDVEDPIDENYYLEVSSPGVFRTLFKDEHFKRYIGEEVTVKLKSLLNGRKKFDAV 119

Query: 135 IMGTSETGFFLEKEKRGEKDMNE 157
           +    +   +++          +
Sbjct: 120 LDNIDDENIYVKANNEVITVPKK 142


>gi|222153584|ref|YP_002562761.1| hypothetical protein SUB1470 [Streptococcus uberis 0140J]
 gi|259645120|sp|B9DVC1|RIMP_STRU0 RecName: Full=Ribosome maturation factor rimP
 gi|222114397|emb|CAR43160.1| conserved hypothetical protein [Streptococcus uberis 0140J]
          Length = 158

 Score = 95.8 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 70/162 (43%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   +   + PVIE   +  V +   +   + +L +FV++ +G +++ D   L++
Sbjct: 1   MANQTIIDTVMKTVSPVIEP-PYELVDVEYEKMGSDYILSVFVDK-EGGISVEDTVTLTE 58

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+       +  G  V   +  +    +   
Sbjct: 59  LISPLLDAIHPDPFPEQYMLEVSSPGLERPLKTPEALTKAIGSYVNVSLYKAIDKVKVFQ 118

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        +    +      +  + I + ++  ARL V
Sbjct: 119 GDLVAFDGDTLTIHYLDK----TRQKTVEIPYQTVAKARLAV 156


>gi|329769655|ref|ZP_08261059.1| hypothetical protein HMPREF0433_00823 [Gemella sanguinis M325]
 gi|328838410|gb|EGF88019.1| hypothetical protein HMPREF0433_00823 [Gemella sanguinis M325]
          Length = 154

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 73/157 (46%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + S+    +++ ++    +  ++E +   L+++ ++ DG ++L DC  LS+ ++
Sbjct: 1   MSIVQKVKSIATEQVKDSNYSLYDVEYVKEGSDYFLRVYFDK-DGGLSLDDCVLLSERLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I   Y LEVSSPGI+R +    +     G  V  +      ++++  G I+ 
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERDLRDLEEVSNSVGKHVYIKTYEKIDNQKEFYGDIIS 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + +     +     + ++ +   RL V
Sbjct: 120 VDGDEITIEYKDKARVKKS----VVKYEKIAKIRLAV 152


>gi|241889857|ref|ZP_04777155.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
 gi|241863479|gb|EER67863.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
          Length = 154

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + ++     E   F    +  ++E     L+I+ ++ DG +TL DC  LS+ ++
Sbjct: 1   MSIVEKVKAIATKQAENTEFSLYDVEYVKEGTEYFLRIYFDK-DGGLTLDDCVLLSEKLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I   Y LEVSSPGI+R +    +     G  V  +      ++++  G I+ 
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERDLRDLEEVTNSVGKHVYIKTYEKIDNQKEFYGDILA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + +     +     I++  +   RL V
Sbjct: 120 VEGEEITVEYKDKARVKKS----TINYSKIAKIRLAV 152


>gi|329115931|ref|ZP_08244648.1| hypothetical protein SPB_1207 [Streptococcus parauberis NCFD 2020]
 gi|326906336|gb|EGE53250.1| hypothetical protein SPB_1207 [Streptococcus parauberis NCFD 2020]
          Length = 160

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I    F  V +   +   + +L I +++ DG +T+ D   L++
Sbjct: 3   IANQSIIETVTEAVAPKILA-PFELVDVEYEKMGNDYVLSILIDK-DGGITVEDTTALTE 60

Query: 75  AISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 61  IISPVLDQITPDPFPEQYMLEVSSPGLERPLKTAESITNAVGSYINVSLYKAIDKIKVFQ 120

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        +       +   +  + I + S+  ARL V
Sbjct: 121 GDLVAFDGQTLTINY----LEKNRQKTVEIPYQSVAKARLAV 158


>gi|24378910|ref|NP_720865.1| hypothetical protein SMU.417 [Streptococcus mutans UA159]
 gi|34222873|sp|Q8DVQ3|RIMP_STRMU RecName: Full=Ribosome maturation factor rimP
 gi|24376793|gb|AAN58171.1|AE014888_9 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 163

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 68/166 (40%), Gaps = 11/166 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEE---MSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCE 70
           +  +      +  +++PV+       F  V I   +   N +L I V++ +  +T+ D  
Sbjct: 1   MCKEGNTIATLVDIVRPVVAPVIPKPFELVDIEYEKLGGNYVLSILVDKPE-GITVEDTA 59

Query: 71  ELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           +L+  ISP+LD    +     Y LE+SSPG++RP+      +   GH +   +  +    
Sbjct: 60  DLTDIISPLLDTIKPDPFPEQYMLEISSPGLERPLKTAQSLMNAVGHYINVSLYQAIDKV 119

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +   G +         +    +      +  + I +  +  ARL V
Sbjct: 120 KVFEGDLTAFDGETLKMTYLDK----TQQKTVTIPYKMVAKARLAV 161


>gi|300866112|ref|ZP_07110840.1| Ribosome maturation factor rimP [Oscillatoria sp. PCC 6506]
 gi|300335908|emb|CBN55998.1| Ribosome maturation factor rimP [Oscillatoria sp. PCC 6506]
          Length = 153

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  P+ E +    V  +    +   +L++ +     +  L DCE +S+A+   
Sbjct: 5   LIPQIIDLATPLAETLGLEVVGAVFHTNQNPPILRVDIRNPQQDTGLEDCERMSKALEEK 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD+ +I+   Y LE+SSPG+ R +    +F+ + G  V  +   +    ++ +G+++   
Sbjct: 65  LDMADILPDAYVLEISSPGLSRSLASDREFISFKGFPVIVKTSEAYNGLKEWVGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   ++ ++ R         IAI    +   +L
Sbjct: 125 EKAVYINQKGR--------PIAIPRSLITQVQL 149


>gi|312862565|ref|ZP_07722807.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
 gi|322517415|ref|ZP_08070288.1| protein of hypothetical function DUF150 [Streptococcus vestibularis
           ATCC 49124]
 gi|311101970|gb|EFQ60171.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
 gi|322123897|gb|EFX95456.1| protein of hypothetical function DUF150 [Streptococcus vestibularis
           ATCC 49124]
          Length = 157

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 9/161 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +++V+ P I E  +  V I   +   + +L + +++  G +T+ D  +L++ 
Sbjct: 1   MSQKIIDLVTAVVAPAIPE-PYELVDIEYEKIGSDYILSVLIDKP-GGITVEDTADLTEI 58

Query: 76  ISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           ISP+LD    +     Y LEVSSPG++RP+  K       G  +   +  +    +   G
Sbjct: 59  ISPLLDTIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSLYKAIDKIKIFQG 118

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            ++        ++   +         + I + ++  ARL V
Sbjct: 119 DLLTFDGETLTIDYLDK----TRHKTVEIPYQTVAKARLAV 155


>gi|299139240|ref|ZP_07032416.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX8]
 gi|298598920|gb|EFI55082.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX8]
          Length = 193

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 74/185 (40%), Gaps = 34/185 (18%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-------------------- 61
             I +    +    S   V +      K+  L++F+E+D                     
Sbjct: 6   ETIRATADRIAASHSLEVVDLEFTGGSKHRTLRVFLEKDAAARAKFTAEAASNEEAGLPK 65

Query: 62  -------GNMTLRDCEELSQAISPILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWN 113
                    +T  DC   ++    +LDVE++I G  Y LE SSPG++R +++ +D+ R+ 
Sbjct: 66  GVPVETLSGVTHEDCANFARDFGTVLDVEDLIPGAEYTLETSSPGLERKLLKAADYERFK 125

Query: 114 GHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK-----EKRGEKDMNELQIAISFDSLL 168
           G +V  +        +   G+++    T   L+      + + +K +    + IS  ++ 
Sbjct: 126 GSLVKVQTFSPVDSNRHFTGRLVAFEGTNLTLDLAAVKQKGKAKKTLTAQTVEISLANVE 185

Query: 169 SARLI 173
            A L+
Sbjct: 186 KANLV 190


>gi|312875705|ref|ZP_07735702.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b]
 gi|311088770|gb|EFQ47217.1| conserved hypothetical protein [Lactobacillus iners LEAF 2053A-b]
          Length = 144

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 66/143 (46%), Gaps = 7/143 (4%)

Query: 32  VIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEG 88
           ++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD    + +  
Sbjct: 1   LVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLPD 60

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LE+SSPG++RP+  ++D+ +     V   +      ++   G ++        LE  
Sbjct: 61  PYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKINGQKSYEGTLLDYDMDKIILEI- 119

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
              +    + +IAI  + + + R
Sbjct: 120 ---KIKTQQQKIAIPRNMIANIR 139


>gi|160898429|ref|YP_001564011.1| hypothetical protein Daci_2988 [Delftia acidovorans SPH-1]
 gi|226703492|sp|A9C1Z0|RIMP_DELAS RecName: Full=Ribosome maturation factor rimP
 gi|160364013|gb|ABX35626.1| protein of unknown function DUF150 [Delftia acidovorans SPH-1]
          Length = 192

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 74/182 (40%), Gaps = 36/182 (19%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD------------DGNMTLRDCEEL 72
           +  +++  +  + +  V+I        LL++ ++              +  +T+ DCE++
Sbjct: 3   LQQIVEQTVTGLGYDLVEIERSAGG--LLRVTIDLPWQPPVEGGPVVPEQFVTVEDCEKI 60

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------ 126
           ++ +   L+V+     + RLEVSSPGIDRP+  + DF R+ G V+   +    G      
Sbjct: 61  TRQLQFALEVD--GADYTRLEVSSPGIDRPLRHEQDFTRFVGEVIDLTLKEPIGAAAEGQ 118

Query: 127 ---DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ-----------IAISFDSLLSARL 172
              +++K  G +    + G+ +           +             +  + + L  ARL
Sbjct: 119 VSANRKKFRGTLERAEDGGWQIVWSDEPPVKPGQKVSKKRVPAPLQALGFTLEELREARL 178

Query: 173 IV 174
             
Sbjct: 179 AP 180


>gi|158334114|ref|YP_001515286.1| hypothetical protein AM1_0930 [Acaryochloris marina MBIC11017]
 gi|259585654|sp|B0BZP6|RIMP_ACAM1 RecName: Full=Ribosome maturation factor rimP
 gi|158304355|gb|ABW25972.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 150

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 9/150 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            +  +  PV  + +   V       +   +L++ +   D +  L DCE++S+A+  +LD 
Sbjct: 4   KVIDLAAPVAAQFNLEVVGAVFQTNQSPPVLRVDIRNCDADTGLEDCEKMSRALEAVLDE 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +++    Y LE+SSPG+   +    DF+ + G  V  +         + IG + G  E  
Sbjct: 64  DDVFPEAYVLEISSPGLSTLLTCDRDFVSFRGFPVLVQTHQPYRGHHQWIGNLTGRDEKF 123

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             L ++ R         I I  + +L  +L
Sbjct: 124 VQLNQKGR--------PIKIPREEILQVQL 145


>gi|113477416|ref|YP_723477.1| hypothetical protein Tery_3979 [Trichodesmium erythraeum IMS101]
 gi|110168464|gb|ABG53004.1| protein of unknown function DUF150 [Trichodesmium erythraeum
           IMS101]
          Length = 172

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 9/159 (5%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
                 L   I     P+ + +    V  +    +   +L++ +     +  L DCE +S
Sbjct: 18  FVMSHPLVPQIIKFATPIAKSLGLELVGAVFHTNQHPPILRLDIRHPHQDTGLDDCERMS 77

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            AI   LD  NII   Y LE+SSPGI + +    DF+ + G  VA         K   IG
Sbjct: 78  NAIGEQLDAANIIPEPYLLEISSPGISKFLDNDRDFIAFKGFNVAVNTSEPYKGKNYWIG 137

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +++   +T  ++ ++ R          +I    + +  L
Sbjct: 138 QLVSRDQTAVYINQKGRQA--------SIPRSLINTVEL 168


>gi|325686966|gb|EGD28990.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK72]
          Length = 177

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPL 82

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    LE   +        ++ I++  +  ARL V
Sbjct: 143 FEEDVLHLEYLDK----TRRKEVEITYSLVSKARLAV 175


>gi|315502522|ref|YP_004081409.1| hypothetical protein ML5_1726 [Micromonospora sp. L5]
 gi|315409141|gb|ADU07258.1| protein of unknown function DUF150 [Micromonospora sp. L5]
          Length = 216

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  VI+PV+    +    +S+       +   +   DG + L    ++S+A+S  LD  
Sbjct: 42  RLREVIEPVVTAAGYDLEDLSVSRAGRRHVVRVIVDADGGINLDGVADVSRAVSAALDAA 101

Query: 84  -----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
                +I+ G Y+LEVSSPG+DRP+     + R  G +V   +       ++L G+I   
Sbjct: 102 EEAGGDIVAGEYQLEVSSPGVDRPLTLPRHWRRNAGRLVKVTVR-GDAGDRQLTGRITAA 160

Query: 139 SETGFFLEKE----KRGEKDMNELQIAISFDSLLS 169
            +    LE +    +    ++   ++ + F+ L  
Sbjct: 161 DDERVVLETDAGPAEHPYAELGPGRVQVEFNRLDD 195


>gi|302865965|ref|YP_003834602.1| hypothetical protein Micau_1466 [Micromonospora aurantiaca ATCC
           27029]
 gi|302568824|gb|ADL45026.1| protein of unknown function DUF150 [Micromonospora aurantiaca ATCC
           27029]
          Length = 216

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  VI+PV+    +    +S+       +   +   DG + L    ++S+A+S  LD  
Sbjct: 42  RLREVIEPVVTAAGYDLEDLSVSRAGRRHVVRVIVDADGGINLDGVADVSRAVSAALDAA 101

Query: 84  -----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
                +I+ G Y+LEVSSPG+DRP+     + R  G +V   +       ++L G+I   
Sbjct: 102 EEAGGDIVAGEYQLEVSSPGVDRPLTLPRHWRRNAGRLVKVTVR-GDAGDRQLTGRITAA 160

Query: 139 SETGFFLEKE----KRGEKDMNELQIAISFDSLLS 169
            +    LE +    +    ++   ++ + F+ L  
Sbjct: 161 DDERVVLETDAGPAEHPYAELGPGRVQVEFNRLDD 195


>gi|209527730|ref|ZP_03276226.1| protein of unknown function DUF150 [Arthrospira maxima CS-328]
 gi|209491851|gb|EDZ92210.1| protein of unknown function DUF150 [Arthrospira maxima CS-328]
          Length = 153

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV + +    V  +    +K  +L++ +   + + +L DCE +S+A+   
Sbjct: 5   LIPKIIDLATPVAKPLGLEVVGAMFYTNQKPPVLRVDIRNLEQDTSLEDCERMSRALEEQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  ++I   Y LEVSSPG+ R +    DF+ + G  V           ++  GK++G  
Sbjct: 65  LDAVDVIPDAYILEVSSPGVSRSLSCDRDFISFKGFPVTVTTSEPYKGHKQQSGKLVGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           E    + ++ R     N L   +  + 
Sbjct: 125 EMAVHINQKGRQISIPNSLITEVLLEE 151


>gi|170017454|ref|YP_001728373.1| YlxS [Leuconostoc citreum KM20]
 gi|259585783|sp|B1MZH7|RIMP_LEUCK RecName: Full=Ribosome maturation factor rimP
 gi|169804311|gb|ACA82929.1| YlxS [Leuconostoc citreum KM20]
          Length = 158

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 14/162 (8%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQ 74
               +A +IS++I+P+I         +S  +E    +L+I +++ +   +T+ D    +Q
Sbjct: 1   MANKVAQEISTLIEPLINAQQLLLWDVSYTKEGGQKVLRILIDKRNHEFITMDDITTFTQ 60

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN--GHVVACEIVLSSGDKQK 130
           A++ +LD    + I   Y L++SSPG DRP++R   +      G  +     ++   ++K
Sbjct: 61  AVNELLDTIEPDPIPEAYMLDISSPGADRPLIRPWHYEWAKASGENILVAFFVAKNGQKK 120

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             GKI    + G  L          +   I  +FD +  A L
Sbjct: 121 WQGKIETIDDKGITLT--------TSSETIVCTFDEIAKAVL 154


>gi|329767073|ref|ZP_08258601.1| hypothetical protein HMPREF0428_00298 [Gemella haemolysans M341]
 gi|328837798|gb|EGF87423.1| hypothetical protein HMPREF0428_00298 [Gemella haemolysans M341]
          Length = 154

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + ++     E   F    +  ++E     L+I+ ++ DG ++L DC  LS+ ++
Sbjct: 1   MSIVEKVKTIATKQTENTEFSLYDVEYVKEGTEYFLRIYFDK-DGGLSLDDCVLLSEKLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I   Y LEVSSPGI+R +    +     G  V  +      ++++  G I+ 
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERDLRNLEEVTNSVGKHVYIKTYEKIDNQKEFYGDILA 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                  +E + +     +     I++  +   RL V
Sbjct: 120 VEGEEITVEYKDKARVKKS----TINYSKIAKIRLAV 152


>gi|157803621|ref|YP_001492170.1| hypothetical protein A1E_02200 [Rickettsia canadensis str. McKiel]
 gi|166987409|sp|A8EYF2|RIMP_RICCK RecName: Full=Ribosome maturation factor rimP
 gi|157784884|gb|ABV73385.1| hypothetical protein A1E_02200 [Rickettsia canadensis str. McKiel]
          Length = 125

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPI 79
           +   I++VI+  + +M F  V +      + +++I ++  +   +++ DC ++S+ I  I
Sbjct: 4   IEQQITNVIEESLIDMGFELVLVKFKGVNSKVVEILIDSLNSEKVSVEDCTKVSRTIPAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVEN+IE    LEV+S G++RP+V+  ++ R+ G  V   +     DK    GKI+   
Sbjct: 64  LDVENLIEDASSLEVASSGLERPLVKFENYNRFLGREVKITLKELLNDKTSYQGKIIKAE 123

Query: 140 E 140
            
Sbjct: 124 N 124


>gi|187251075|ref|YP_001875557.1| hypothetical protein Emin_0665 [Elusimicrobium minutum Pei191]
 gi|259585767|sp|B2KC93|RIMP_ELUMP RecName: Full=Ribosome maturation factor rimP
 gi|186971235|gb|ACC98220.1| Uncharacterized protein conserved in bacteria [Elusimicrobium
           minutum Pei191]
          Length = 152

 Score = 94.3 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I SV+   +    +  V + +  + +  L Q FV++ +G + L D E+ S+ I  I+++E
Sbjct: 7   IESVVADGLANQGYEVVDLIVQNQGSKKLFQFFVDK-EGGINLDDVEKASRLIDSIIEME 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           N+IEG Y LE SSPGI R + +   F ++ G      +     ++    G I G +ET  
Sbjct: 66  NLIEGAYILEASSPGIKRVLKKPEHFKKFIGQRAKITLKQMIENRANFTGLIAGANETEM 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
            L+            Q    ++ +  A L
Sbjct: 126 TLDD--------GTTQFKFKYEDIKKANL 146


>gi|291287255|ref|YP_003504071.1| hypothetical protein Dacet_1343 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884415|gb|ADD68115.1| protein of unknown function DUF150 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 169

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 11/147 (7%)

Query: 32  VIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE--G 88
           V+ E       ++L  E    +L+I +++ +    + DC E S+AIS  LD E+ I    
Sbjct: 28  VLSEKGLELFDMTLRSERGGKVLRITIDK-ETGPGIEDCTEASRAISAFLDGEDNIVPLD 86

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMGTSETGFFLEK 147
            Y LEVS+PG++RP+  + DF+R  G       V      ++   GKI    ++   L  
Sbjct: 87  KYHLEVSTPGLERPLRSQQDFVRQTGKKCKIITVNKDESGRKSYTGKIDSVDDSKVTLYV 146

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           EK            IS D++  A L+V
Sbjct: 147 EKESAA------FEISLDNISKANLVV 167


>gi|269123543|ref|YP_003306120.1| hypothetical protein Smon_0773 [Streptobacillus moniliformis DSM
           12112]
 gi|268314869|gb|ACZ01243.1| protein of unknown function DUF150 [Streptobacillus moniliformis
           DSM 12112]
          Length = 164

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 12/166 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            I   IQP + E S     I  + E     L+I+VE  +GN +L DC  LS  I  I  V
Sbjct: 7   KIEKEIQPYLNENSLELADIEYVREGGYNFLRIYVESKNGNTSLDDCVMLSTKIDNI--V 64

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           + +I+  + LEVS+PG++R + ++ DF+R+ G  ++ +   +  +K+   G ++G     
Sbjct: 65  DELIDDKFYLEVSTPGLERKLKKEKDFIRFTGKKISVKTKSNVENKKSFEGILLGFENGK 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVT--DELLRASLNNY 186
             ++ +           + I  + +  A+L+    D++ +  + N 
Sbjct: 125 ILIKDD-------IIENVEIPLEKIKVAKLVFNLSDKIFKEDVENE 163


>gi|332528892|ref|ZP_08404862.1| hypothetical protein HGR_03237 [Hylemonella gracilis ATCC 19624]
 gi|332041649|gb|EGI78005.1| hypothetical protein HGR_03237 [Hylemonella gracilis ATCC 19624]
          Length = 202

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 76/190 (40%), Gaps = 37/190 (19%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD------DGNMTLRDCEE 71
              +   +  + +  +  + +  V+I        LL+I ++        +  + + DCE+
Sbjct: 5   KDKIKLTLQEIAEQTVTGLGYELVEIERSAGG--LLRITIDLPWTPGLHEQFVNVEDCEK 62

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG----- 126
           +++ +  +L+VE I   + RLEVSSPGIDRP+  + DF R+ G V+   +    G     
Sbjct: 63  VTRQLQYVLEVEGI--EYKRLEVSSPGIDRPLRHEQDFERFAGQVIDVTLKAPIGAAALA 120

Query: 127 -----------DKQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISF 164
                      +++K  G +    + G+ +               +  +      +  + 
Sbjct: 121 GQDAAGGKVAANRKKFRGTLEKAPQGGWQIVWSDEPAPKPGQRVSKKREPAPLQALGFTL 180

Query: 165 DSLLSARLIV 174
           D L  ARL  
Sbjct: 181 DELRDARLAP 190


>gi|259645132|sp|Q10XM0|RIMP_TRIEI RecName: Full=Ribosome maturation factor rimP
          Length = 153

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I     P+ + +    V  +    +   +L++ +     +  L DCE +S AI   
Sbjct: 5   LVPQIIKFATPIAKSLGLELVGAVFHTNQHPPILRLDIRHPHQDTGLDDCERMSNAIGEQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  NII   Y LE+SSPGI + +    DF+ + G  VA         K   IG+++   
Sbjct: 65  LDAANIIPEPYLLEISSPGISKFLDNDRDFIAFKGFNVAVNTSEPYKGKNYWIGQLVSRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +T  ++ ++ R          +I    + +  L
Sbjct: 125 QTAVYINQKGRQA--------SIPRSLINTVEL 149


>gi|291546818|emb|CBL19926.1| Uncharacterized protein conserved in bacteria [Ruminococcus sp.
           SR1/5]
          Length = 120

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +++ P++E   F  V +  ++E     L+ ++++  G +T+ DCE++S+A S IL
Sbjct: 8   EQKTEAILTPIVESRGFELVDVEYVKEAGTWYLRGYIDKP-GGITVNDCEDVSRAFSDIL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           D ++ IE  Y +E+SSPG+DRP+ ++                  S +++ 
Sbjct: 67  DEQDFIEDSYIMEISSPGLDRPLKKEKTLREALASWWRSVPTGPSRNRKN 116


>gi|15604409|ref|NP_220926.1| hypothetical protein RP554 [Rickettsia prowazekii str. Madrid E]
 gi|6647940|sp|Q9ZCZ6|RIMP_RICPR RecName: Full=Ribosome maturation factor rimP
 gi|3861103|emb|CAA15003.1| unknown [Rickettsia prowazekii]
          Length = 117

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPI 79
           +A  I+++I+  + +M F  V +        ++++ ++  +   +++ DC  +S+ IS I
Sbjct: 4   IAQQITNIIEESLTDMGFELVLVKFKGVSPKVVEVLIDSLNGNKISIEDCTNVSRTISAI 63

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           LDVE++IE  Y LEVSS GI+R +V+  ++ R+ G  V  ++      K
Sbjct: 64  LDVEDLIEEAYSLEVSSSGIERTLVKFENYNRFLGREVKIKLKELLNGK 112


>gi|331002484|ref|ZP_08326002.1| hypothetical protein HMPREF0491_00864 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410300|gb|EGG89734.1| hypothetical protein HMPREF0491_00864 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 154

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 2/141 (1%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILD 81
                 ++ +  E+ F  V +  ++E     L+ + ++  G + + DC ++S+ +S  LD
Sbjct: 9   KRTEEFLEKLSSELDFEVVDVEFVKEAGEHYLRAYCDK-TGGIGIEDCADISRHLSDWLD 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I+  Y LEVSSPG+ R + +  DFLR  G  V  ++  +    +   G +      
Sbjct: 68  ENDFIDEGYILEVSSPGLGRTLKKDKDFLRELGKEVELKLYKAREGVKDFEGVLKSFDGD 127

Query: 142 GFFLEKEKRGEKDMNELQIAI 162
              +E E + E    +    I
Sbjct: 128 NITVEIENKDEVFTKKEIANI 148


>gi|315104206|gb|EFT76182.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
          Length = 245

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 13/176 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER---DDGNMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++    D    +L +  E +  IS
Sbjct: 70  AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 129

Query: 78  PILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ---KLIG 133
             LD    +    Y LEVSS G+  P+ +   + R  GH+V   +   +  ++      G
Sbjct: 130 HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTL-NPAEGQKSGETFDG 188

Query: 134 KIMGTSETGFFLEKEKRGEKDMNE--LQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +I    E    LE E    K          +    +  A  +V  EL R       
Sbjct: 189 RIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 242


>gi|17231320|ref|NP_487868.1| hypothetical protein alr3828 [Nostoc sp. PCC 7120]
 gi|34222944|sp|Q8YQJ5|RIMP_ANASP RecName: Full=Ribosome maturation factor rimP
 gi|17132962|dbj|BAB75527.1| alr3828 [Nostoc sp. PCC 7120]
          Length = 153

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 9/146 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I+ +  PV E++    V I     ++  +L+I +     +  L DCE +S+A+   LD  
Sbjct: 9   ITDLAIPVAEQLGLEVVGIVFHTNQRPPVLRIDIRNPQQDTGLDDCERMSRALEAALDAT 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            II   Y LEVSSPGI R +V   +F+ + G  V         ++Q+ IG+++   ET  
Sbjct: 69  EIIPDAYVLEVSSPGISRQLVTDREFISFKGFPVIVSTSPPHEEQQEWIGQLIRRDETKV 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLS 169
           ++ ++ R         I I    +  
Sbjct: 129 YINQKGR--------VIEIPRPLITR 146


>gi|221195857|ref|ZP_03568910.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
 gi|221184331|gb|EEE16725.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
          Length = 164

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 13/166 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN---MTLRDCEE 71
               G    I SV++          V + ++   K  ++++ ++  D +   ++L +   
Sbjct: 1   MSVEGSVERIISVLEERALGHDIDIVDVEVVGSAKAPVVRVRIDHADEDGKTISLDEVAA 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            +  IS  LD  ++  G + LEVSSPG+DRP+ R  DF R++G  V+ +   +   +++ 
Sbjct: 61  ETGWISDALDEIDVFPGSFTLEVSSPGMDRPLRRVRDFERFSGSQVSLQTT-ALEGRRRY 119

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            GK++G  E    LE +         +   I    +    L  T +
Sbjct: 120 TGKLLGIQENIVSLESDG--------MTYDIPLTEIKKCTLKPTFD 157


>gi|171778094|ref|ZP_02919351.1| hypothetical protein STRINF_00186 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283076|gb|EDT48500.1| hypothetical protein STRINF_00186 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 146

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 9/150 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VEN 84
           ++ P I+E  F  V +   +   + +L I +++  G +T+ D  +L++ ISP+LD    +
Sbjct: 1   MVAPAIKE-PFELVDVEYGKMGSDYVLSILIDKP-GGITVNDTADLTEIISPLLDAIKPD 58

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEVSSPG++RP+  K    +  G  V   +  +    +   G ++        
Sbjct: 59  PFPEQYMLEVSSPGLERPLKTKEALEKALGSYVNVSLYKAIDKVKVFQGDLVAFDGETLT 118

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++   +  K      + I + ++  ARL V
Sbjct: 119 IDYLDKTRKK----TVEIPYSTVAKARLAV 144


>gi|332528134|ref|ZP_08404165.1| hypothetical protein RBXJA2T_19301 [Rubrivivax benzoatilyticus JA2]
 gi|332112705|gb|EGJ12498.1| hypothetical protein RBXJA2T_19301 [Rubrivivax benzoatilyticus JA2]
          Length = 194

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 16/154 (10%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVER--------DDGNMTLRDCEELSQAISPIL 80
           I+  +  +S+  V++        LL++ ++R        +   +T+ DCE +++ +  +L
Sbjct: 25  IERTVTGLSYDLVEVE--RAGRGLLRVTIDRVPGHAYPVEGEFVTVEDCEAVTRQLQYVL 82

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +VEN+   + RLEVSSPG+DRP+ R +D+ R++G  +   +      ++   G +     
Sbjct: 83  EVENV--DYERLEVSSPGLDRPLRRAADYERFSGQEIELTLRQPFQGRKHWKGLLGKGEG 140

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G+ L  +        E  +A S D +  ARL+ 
Sbjct: 141 EGWNLVFQDGKA----EQVLAFSLDEVREARLVP 170


>gi|288574933|ref|ZP_06393290.1| protein of unknown function DUF150 [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570674|gb|EFC92231.1| protein of unknown function DUF150 [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 181

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 77/150 (51%), Gaps = 12/150 (8%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV-- 82
              I+ ++E + +  + + + +E     ++++++   G +++RDCE +S+ I+  L+   
Sbjct: 8   KEEIREIVESLGYEFIGLEVKKESAASFVRVYMDSL-GGISVRDCEIVSRRINNWLEESG 66

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E++++  Y LEVSSPG++RP+    DF R++G   +  +      ++++ G +  + +  
Sbjct: 67  EDLLDDRYYLEVSSPGLERPLFSLDDFRRFSGKEASIRLNELVEGRRRINGIVSVSQDGS 126

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +E          +       + +LSA+L
Sbjct: 127 IRVE--------NQDGAFEFPLEMILSAKL 148


>gi|229815166|ref|ZP_04445503.1| hypothetical protein COLINT_02212 [Collinsella intestinalis DSM
           13280]
 gi|229809396|gb|EEP45161.1| hypothetical protein COLINT_02212 [Collinsella intestinalis DSM
           13280]
          Length = 164

 Score = 93.9 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELS 73
                +  DI   ++    E     V + ++   K   +++ +++ +   + L +    +
Sbjct: 1   MVKSKVEQDIIDALEARAAEHGIDIVDVEVVGATKAPCVRVRLDKLEGDPINLDEVTAQT 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             +S  ++  + I   Y LEVSSPG+ RP+ R SDF R+ G  V          ++   G
Sbjct: 61  AWVSETVEALDPISSAYTLEVSSPGMKRPLRRPSDFARFVGEDVELTTTAM-EGRRSYKG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            I   ++    ++ E           + I+FD +    L
Sbjct: 120 AIAAATDACVTIQPEGEDA-------VTIAFDDVKKCAL 151


>gi|309775436|ref|ZP_07670439.1| 15 kDa protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916825|gb|EFP62562.1| 15 kDa protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 183

 Score = 93.9 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 5/155 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  +I P++ E       ++   E K  +LQ+ +   DG+M +  C   S+ IS
Sbjct: 29  MDQIEKLKKLITPLVAEDGIVLYDVAWHTEGKMRILQVSIMHKDGSMDIDTCAAQSEKIS 88

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD  ++I   Y LEV SPG +R +  +       G  V  ++        ++ G +  
Sbjct: 89  AMLDELDLISSEYFLEVCSPGAERELKSEDQIKDAIGEFVYVKLKNPKAGMDEIKGTLTA 148

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 +L+   +  K   E    I  D++   RL
Sbjct: 149 FENHTVYLDYMAKAVKKKAE----IEMDNIALIRL 179


>gi|251772258|gb|EES52828.1| conserved protein of unknown function [Leptospirillum
           ferrodiazotrophum]
          Length = 171

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 1/138 (0%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             ++  I  +++ M      + L ++   +L++FV+  +  +T+   E +S+ +S +LDV
Sbjct: 11  ERLTEEITLLLDSMGLTLYDLVLPKKSGGVLRVFVDGPE-GVTIDQIESVSRRVSVLLDV 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            +   G Y LEVSSPG+DR +    D  +  G  V+ ++V +   ++ L G+I    + G
Sbjct: 70  LDPFPGRYHLEVSSPGLDRLLKIPEDLRKNEGKWVSLKLVDAIEGQKVLKGRIGSVGDAG 129

Query: 143 FFLEKEKRGEKDMNELQI 160
           FFL  +   +  + E+  
Sbjct: 130 FFLHVDAGKKSRILEVPF 147


>gi|325142813|gb|EGC65184.1| hypothetical protein NMB9615945_0622 [Neisseria meningitidis
           961-5945]
          Length = 109

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 10/113 (8%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
            +G +T+ DC  +S  +S +  VE+I   +  LE+SSPG+DRP+ + +DF+R+ G     
Sbjct: 1   KEGGITVEDCATVSNHLSRVFMVEDI--DYKNLEISSPGLDRPLKKAADFVRFAGQNAKI 58

Query: 120 EIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +  L    ++  IGKI G       +  + +         + I   ++  ARL
Sbjct: 59  KTRLPIDGQKNFIGKIEGCENDTVTISFDGK--------TVQIELGNIDKARL 103


>gi|295426317|ref|ZP_06818976.1| protein of hypothetical function DUF150 [Lactobacillus amylolyticus
           DSM 11664]
 gi|295063990|gb|EFG54939.1| protein of hypothetical function DUF150 [Lactobacillus amylolyticus
           DSM 11664]
          Length = 159

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 8/157 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDD-GNMTLRDCEELSQAI 76
             +   I S I+P+I++     V I  ++EK    L+I+V++D  G + + +   LS+ +
Sbjct: 2   SKITDLIRSEIEPIIDQRGDEFVDIEYVKEKGQNYLRIYVDKDQLGGIDINEIAYLSELV 61

Query: 77  SPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           S  LD    + +   Y L +SSPG + P+    D+ +  G  V   +      K+   G 
Sbjct: 62  SEKLDSLDPDPLPDPYVLGLSSPGAEHPIKSAKDWTKARGEYVHVGLYQKIDGKKIYEGT 121

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +   S+    LE     +       + I    + + R
Sbjct: 122 LKSYSDEEIELEI----KIKTRRKTLNIPRKLIANIR 154


>gi|298490030|ref|YP_003720207.1| hypothetical protein Aazo_0596 ['Nostoc azollae' 0708]
 gi|298231948|gb|ADI63084.1| protein of unknown function DUF150 ['Nostoc azollae' 0708]
          Length = 153

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PV E++    V I L   ++  +L++ +     + +L DCE +S+ +   
Sbjct: 5   LVPQIIDLAIPVAEQLGLEVVGIVLHTNQRPPVLRVDIRNTQQDTSLDDCERMSRVLEAS 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD   II   Y LEVSSPGI R ++   +F+ + G  V          +Q+  G+++   
Sbjct: 65  LDAAEIIPDAYVLEVSSPGISRQLITDREFISFKGFPVVISTSQPYDGQQEWTGQLIRRG 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           ET  +L ++ R  +    L   +  D 
Sbjct: 125 ETKIYLNQKGRVVEIPRPLVTRVQLDE 151


>gi|224373557|ref|YP_002607929.1| hypothetical protein NAMH_1540 [Nautilia profundicola AmH]
 gi|259585797|sp|B9L6E1|RIMP_NAUPA RecName: Full=Ribosome maturation factor rimP
 gi|223588517|gb|ACM92253.1| conserved hypothetical protein [Nautilia profundicola AmH]
          Length = 148

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 18/149 (12%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +++ +I+ ++E+       I L  E  +   ++++ +  G ++L DC +++  ISPI D+
Sbjct: 5   ELNDIIKNIVEDNGCDLYDIELSEEGGHKYFRVYITKP-GGVSLNDCAKINNLISPIFDI 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ +EG Y LEVSSPG++R + +   F +  G  V       +    KL G++    +  
Sbjct: 64  EDPVEGKYFLEVSSPGLERKLTKPEHFEKSIGEKVKVTTNDGT----KLKGELKSFIDNV 119

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             + KEK            ++FD +  A+
Sbjct: 120 AEIGKEK------------VNFDDIKKAK 136


>gi|306832817|ref|ZP_07465952.1| protein of hypothetical function DUF150 [Streptococcus bovis ATCC
           700338]
 gi|304425052|gb|EFM28183.1| protein of hypothetical function DUF150 [Streptococcus bovis ATCC
           700338]
          Length = 146

 Score = 93.1 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 9/150 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VEN 84
           ++ P I+E  F  V +   +   + +L I +++ +  +T+ D  EL++ ISP+LD    +
Sbjct: 1   MVAPAIKE-PFELVDVEYEKMGSDYVLSILIDKPE-GITVDDTAELTEIISPLLDAIKPD 58

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEVSSPG++RP+  K    +  G  V   +  +    +   G ++        
Sbjct: 59  PFPEQYMLEVSSPGLERPLKTKEALEKAVGSYVNVSLYKAIDKVKVFQGDLVAFDGDTLT 118

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++   +  K      + I + ++  ARL V
Sbjct: 119 IDYLDKTRKK----TVEIPYSTVAKARLAV 144


>gi|254382095|ref|ZP_04997457.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194341002|gb|EDX21968.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 170

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 6/153 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++         I + +  K  +L++ V+ D+  + L  C ELS+ IS  LD
Sbjct: 7   DRLRGLLEPLVAAKGLDLEDIEMSKAGKRRMLRVIVDSDE-GVELDTCAELSREISDQLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIMGTS 139
             +++ E  Y LEVSSPG DRP+     ++R  G +V  ++         +L+ +I+   
Sbjct: 66  ESDVMGEDEYVLEVSSPGADRPLTEHRHYVRALGRLVKFQLTAGDDKGAGELVARILDVD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  LE      +        I+F  +  AR+
Sbjct: 126 DEGMDLEVPGVKGRKATAR--RIAFTDIAKARV 156


>gi|163815207|ref|ZP_02206584.1| hypothetical protein COPEUT_01365 [Coprococcus eutactus ATCC 27759]
 gi|158449402|gb|EDP26397.1| hypothetical protein COPEUT_01365 [Coprococcus eutactus ATCC 27759]
          Length = 129

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 42  QISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGID 100
            +  ++   +  L+++ ++ +G +T+ DCE +++A+  +LD E+ I   Y LEVSSPG+ 
Sbjct: 2   DVEYVKEGSDYYLRVYADK-EGGITINDCEIVNRALGDLLDQEDYISDAYILEVSSPGLT 60

Query: 101 RPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQI 160
           RP+ +++DF R  G VV  +  +     ++  G +    +    +E E        E ++
Sbjct: 61  RPLKKENDFKRSIGKVVEIKTFVKINGAKEFEGVLKAYDDATVTIEFED-------ETEV 113

Query: 161 AISFDSLLSARLIV 174
            IS   +   RL  
Sbjct: 114 TISRKDISMIRLAF 127


>gi|237752794|ref|ZP_04583274.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376283|gb|EEO26374.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 150

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 14/155 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER--DDGNMTLRDCEELSQA 75
           M ++ ++   I+ ++E + F    +  L+E  N +L+I + +  +  +++L DC+E+S A
Sbjct: 1   MTISPNLEDKIKVLVESLGFDLYDVLTLKENENQILRICITKNMESKSVSLDDCQEVSLA 60

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +SP+LDVE      Y LEVSSPGI+R +   + +      ++  + +     K++  GK+
Sbjct: 61  LSPLLDVEMPDFEKYYLEVSSPGIERVLKTLAHYKGAINELIKVKTLQEIAGKKEFKGKL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           +  SE+   LE             + I  +++  A
Sbjct: 121 VSVSESVLVLE-----------NGVEIPLNAIKKA 144


>gi|238063379|ref|ZP_04608088.1| hypothetical protein MCAG_04345 [Micromonospora sp. ATCC 39149]
 gi|237885190|gb|EEP74018.1| hypothetical protein MCAG_04345 [Micromonospora sp. ATCC 39149]
          Length = 232

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 19/166 (11%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             + +VI+PV+    +    +S+       +   +   DG + L    ++S+A+S  LD 
Sbjct: 41  ARLHAVIEPVVNAAGYDLEDVSVSRAGRRHVVRVIVDADGGINLDAVADVSRAVSAALDA 100

Query: 83  E-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--------- 128
                 +I+ G Y+LEVSSPG+DRP+     + R  G +V       +            
Sbjct: 101 AEEAGGDILAGEYQLEVSSPGVDRPLTLPRHWRRNVGRLVKVTARAVAPGPRAGDRQPTG 160

Query: 129 -QKLIGKIMGTSETGFFLEKE----KRGEKDMNELQIAISFDSLLS 169
            +++ G+++   +    LE +    +    ++   ++ + F  L  
Sbjct: 161 DRQVTGRVVEADDERVVLETDSGRVEFSHAELGPGRVQVEFHRLDE 206


>gi|289805472|ref|ZP_06536101.1| hypothetical protein Salmonellaentericaenterica_13917 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 86

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +LDVE+ I 
Sbjct: 1   MITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDPIS 59

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNG 114
             Y LEVSSPG+DRPM     +  + G
Sbjct: 60  VAYNLEVSSPGLDRPMFTADHYASFRG 86


>gi|332366409|gb|EGJ44160.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK355]
          Length = 177

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  V I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELVDIEYGKMGGDYVLSVFVDKPE-GITVNDTADLTDIISPL 82

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYIHVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +        ++ I +  +  ARL V
Sbjct: 143 FEEDVLRMEYLDK----TRRKEVEILYSLVSKARLAV 175


>gi|332707467|ref|ZP_08427515.1| hypothetical protein LYNGBM3L_38480 [Lyngbya majuscula 3L]
 gi|332353764|gb|EGJ33256.1| hypothetical protein LYNGBM3L_38480 [Lyngbya majuscula 3L]
          Length = 153

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  +  P+ +++    V+       +  +L++++     + +L DCE +S+A+   
Sbjct: 5   LIPQLIDLATPLAQDLGLEIVEALFQTNRRPPVLRVYIRNPIRDTSLDDCERMSRALEAQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD + II   Y LE+SSPGI + +    +F+ + G  V  +       +Q+  G+++   
Sbjct: 65  LDAKEIILDTYVLEISSPGITQDLTTDREFISFKGFGVIVQTFEPYQGQQEWRGQLIRRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E+G +L  + R          AI    +   +L
Sbjct: 125 ESGVYLNLKGRA--------FAIPRQLVSRVKL 149


>gi|225874865|ref|YP_002756324.1| hypothetical protein ACP_3325 [Acidobacterium capsulatum ATCC
           51196]
 gi|259585657|sp|C1F695|RIMP_ACIC5 RecName: Full=Ribosome maturation factor rimP
 gi|225792684|gb|ACO32774.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 201

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 69/194 (35%), Gaps = 42/194 (21%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER---------------------- 59
             I S  Q V        V +      K+ +L+IF+E+                      
Sbjct: 6   DTIRSAAQRVASSHGLDVVDVEYQGGAKHRMLRIFIEKNAEERAKLAAQSSGRVETIEVH 65

Query: 60  -----------DDGNMTLRDCEELSQAISPILDVENIIEG--HYRLEVSSPGIDRPMVRK 106
                          +T  DC   S     +LDVE ++ G   Y LEVSSPG+DR +  +
Sbjct: 66  EEMPREGMNPEHFSGVTHEDCSAFSTDFGTLLDVEELMPGASEYTLEVSSPGLDRKLQSR 125

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE------KRGEKDMNELQI 160
           +D+ R+ G +V           +   G++ G       L+        K  EK      +
Sbjct: 126 ADYERFAGSLVKLSTFEPVNGNRHWQGRMAGLDGDTLRLDLTAMKQKGKGKEKKSAAETV 185

Query: 161 AISFDSLLSARLIV 174
            I+  ++  A+LI 
Sbjct: 186 EIALGNVEKAQLIP 199


>gi|120612039|ref|YP_971717.1| hypothetical protein Aave_3385 [Acidovorax citrulli AAC00-1]
 gi|226703802|sp|A1TSK5|RIMP_ACIAC RecName: Full=Ribosome maturation factor rimP
 gi|120590503|gb|ABM33943.1| protein of unknown function DUF150 [Acidovorax citrulli AAC00-1]
          Length = 202

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 74/188 (39%), Gaps = 42/188 (22%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD------------------DGNMTL 66
           +  +++  +  + +  V+I        LL+I ++                    +  +T+
Sbjct: 3   LQQIVEQTVAGLGYDLVEIERSAGG--LLRITIDLPWQPPVEGAASDAAAPAGPEAFVTV 60

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
            DCE++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G V+   +    G
Sbjct: 61  EDCEKVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRHEQDFQRFAGEVIDITLKAPIG 118

Query: 127 ---------DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ-----------IAISFDS 166
                    +++K  G +      G+ +           +             +  + D 
Sbjct: 119 DAAAGQVNANRKKFRGTLERAETGGWQIVWSDEPPPKPGQKVSKKRVPAPLQALGFTLDE 178

Query: 167 LLSARLIV 174
           L  ARL  
Sbjct: 179 LRDARLAP 186


>gi|302537259|ref|ZP_07289601.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302446154|gb|EFL17970.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 170

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++         I L +  K  +L+I V+ D+  + L +C ELS+ IS  LD
Sbjct: 7   DRLRGLLEPLVAAKGLDLEDIELSKAGKRRMLRIIVDSDE-GVDLDECAELSREISDRLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV-LSSGDKQKLIGKIMGTS 139
             +++ E  Y LEVSSPG DRP+  +  ++R  G +V  ++         +LI +I+G  
Sbjct: 66  ESDVMGEDEYNLEVSSPGADRPLSERRHYVRATGRLVKFQLSAEGEKGAGELIARILGVD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + G  LE      +        I+F  +  AR+
Sbjct: 126 DEGMDLEVPGVKGRKATAR--RIAFTDVAKARV 156


>gi|327459331|gb|EGF05677.1| protein of hypothetical function DUF150 [Streptococcus sanguinis
           SK1]
          Length = 177

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 9/157 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   +  VI+P I    +  + I   +   + +L +FV++ +  +T+ D  +L+  ISP+
Sbjct: 25  IVELVREVIEPAILA-PYELIDIEYGKMGGDYVLSVFVDKSE-GITVNDTADLTDIISPL 82

Query: 80  LDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD    +     Y LEV+SPG++RP+  K       G  +   +  +   ++   G ++ 
Sbjct: 83  LDQIKPDPFPEQYFLEVTSPGLERPLKTKEQLADAVGSYINVSLYKAVDKQKVFEGTLLS 142

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    +E   +        ++ I +  +  ARL V
Sbjct: 143 FEEDVLHMEYLDK----TRRKEVEIPYSLVSKARLAV 175


>gi|145593915|ref|YP_001158212.1| hypothetical protein Strop_1367 [Salinispora tropica CNB-440]
 gi|259586196|sp|A4X4N4|RIMP_SALTO RecName: Full=Ribosome maturation factor rimP
 gi|145303252|gb|ABP53834.1| protein of unknown function DUF150 [Salinispora tropica CNB-440]
          Length = 220

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  V++PV+ E  +   ++S+       +   +   DG + L    ++S+A+S  LD 
Sbjct: 40  ARLHEVVEPVVGEAGYDLEELSISRAGRRHVVQVIVDADGGIDLDAVADVSRAVSAALDA 99

Query: 83  E-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV-LSSGDKQKLIGKIM 136
                 +I+ G Y+LEVSSPG+ RP+     + R  G +V   +        ++L G+++
Sbjct: 100 AEEARGDIVAGEYQLEVSSPGVSRPLTLPRHWRRNAGRLVRVTVRGGPDAGDRQLTGRVV 159

Query: 137 GTSETGFFLEKE----KRGEKDMNELQIAISF 164
              +    LE +         ++   ++ + F
Sbjct: 160 EADDEQVVLETDAGRAGWSYAELGPGRVQVEF 191


>gi|262037341|ref|ZP_06010806.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264]
 gi|261748598|gb|EEY35972.1| conserved hypothetical protein [Leptotrichia goodfellowii F0264]
          Length = 178

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 12/170 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQ 74
                +       IQ  ++ +      +  ++E     L+++VE+ DG  +L DC ELS 
Sbjct: 15  IILEEILSKFEKEIQDSLDSLDLELSDLEYIQEGGYNYLRVYVEKKDGTTSLDDCIELSS 74

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I  +   +N+I   + LEVS+PG++R + ++ DF+R++G  +          K+   GK
Sbjct: 75  KIDGL--ADNLINEKFYLEVSTPGVERKLKKEKDFIRFSGEKIKLHSKSQIEGKKTFEGK 132

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI---VTDELLRA 181
           +        FL  +  G+       + I    L  A LI     D L + 
Sbjct: 133 LEKFENDTIFLNDQNIGK------TVEIPLSKLKKANLIYELPNDTLEKE 176


>gi|116618454|ref|YP_818825.1| hypothetical protein LEUM_1359 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431860|ref|ZP_03913884.1| protein of hypothetical function DUF150 [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|122271346|sp|Q03WH0|RIMP_LEUMM RecName: Full=Ribosome maturation factor rimP
 gi|116097301|gb|ABJ62452.1| hypothetical protein LEUM_1359 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227352402|gb|EEJ42604.1| protein of hypothetical function DUF150 [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 158

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 14/160 (8%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQ 74
                   +  +I P+IE  +     ++  +E    +L+I +++ D   +T+ D    +Q
Sbjct: 1   MANKTEQTVIDLISPIIEAHNDLLWDLTFTKEGGQKVLRILLDKPDHQFITMNDLTLFTQ 60

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN--GHVVACEIVLSSGDKQK 130
            ++ +LD    + I   Y L++SSPG DRP+     F         +   + ++   ++K
Sbjct: 61  EVNELLDTVDPDPIPEAYVLDISSPGADRPLKELWHFEWAKEANENILVSLFVAKEGQKK 120

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
             GKI   ++ G  L             ++ ++FD +  A
Sbjct: 121 WQGKIADLNKDGLTLTTTN--------GRLPLTFDEIAKA 152


>gi|187478886|ref|YP_786910.1| hypothetical protein BAV2396 [Bordetella avium 197N]
 gi|123514388|sp|Q2KXY5|RIMP_BORA1 RecName: Full=Ribosome maturation factor rimP
 gi|115423472|emb|CAJ50006.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 159

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 75/152 (49%), Gaps = 7/152 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R+D  + + DCE++S+ +S + +V
Sbjct: 2   ADLFALTEEALAGMGIELVDVE--RAALGLLRVTIDRED-GVRIEDCEQVSRQLSRVYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS--E 140
           ENI   + RLEV SPG+DRP+  +++F R+ G  +  ++  +   ++   G +       
Sbjct: 59  ENI--DYKRLEVGSPGVDRPLRNEAEFRRFAGERIEIKLREAVDGRKVFTGILQEADTSA 116

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +   +   K  +   ++ + D +  A+L
Sbjct: 117 DDKTVFGLEFEAKKDDIQVLSFTLDDIERAKL 148


>gi|332522698|ref|ZP_08398950.1| hypothetical protein STRPO_1027 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313962|gb|EGJ26947.1| hypothetical protein STRPO_1027 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 176

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 9/167 (5%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDC 69
            E  +  +  +   ++  + PVI+   F  V +   +   + +L I V++ +G +T+ D 
Sbjct: 14  KEGIVIANQHIIDTVTETVSPVIKS-PFELVDVEYEKMGSDYILSILVDK-EGGITVEDT 71

Query: 70  EELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
            EL++ ISP+LD    +     Y LEVSSPG++RP+  K    +  G  V   +  +   
Sbjct: 72  TELTEIISPLLDQISPDPFPDQYMLEVSSPGLERPLKTKEAIEKAVGSYVNVSLYKAIDK 131

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +   G ++        ++   +         + I + ++  ARL V
Sbjct: 132 VKVFQGDLISFDGKTLTIDYLDK----TRHKVVDIPYQTVAKARLAV 174


>gi|149194181|ref|ZP_01871279.1| hypothetical protein CMTB2_03813 [Caminibacter mediatlanticus TB-2]
 gi|149136134|gb|EDM24612.1| hypothetical protein CMTB2_03813 [Caminibacter mediatlanticus TB-2]
          Length = 147

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 18/155 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
             ++ +VI+ ++E+       I    E ++   ++++ +  G + L DC  ++  ISPI 
Sbjct: 3   KEELKNVIKNIVEDNGCELYDIEETTEGEHKYFRVYITKP-GGVNLNDCTAINNLISPIF 61

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DVE+ ++G Y LEVSSPG++R + +   F +  G  V   +   +    K+ G++    +
Sbjct: 62  DVEDPVDGKYFLEVSSPGVERKLTKSEHFEKSIGENVKVTLNDGT----KIKGQLKSFVD 117

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
               + KEK            ++F+ +  A+  V 
Sbjct: 118 NIAEIGKEK------------VNFEDIKKAKTYVD 140


>gi|332283700|ref|YP_004415611.1| hypothetical protein PT7_0447 [Pusillimonas sp. T7-7]
 gi|330427653|gb|AEC18987.1| hypothetical protein PT7_0447 [Pusillimonas sp. T7-7]
          Length = 164

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 14/158 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            DI ++ Q  I  M    V +        LL++ ++R +  + + DCE++S+ +S + +V
Sbjct: 2   ADIFALTQEAIAGMDVELVDVERAPLG--LLRVTIDRAE-GVRIEDCEQVSKHLSRVFEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           ENI   + RLEV SPGIDRP+ R +DF+R+    V  ++  +  +++   G +  +    
Sbjct: 59  ENI--DYKRLEVGSPGIDRPLKRVADFIRFANERVEIKLREAIDNRKVYAGVLRVSENVA 116

Query: 143 --------FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                   F LE E    K+     +  +FD +  A+L
Sbjct: 117 SDPSANPVFGLELEPTSRKEPA-QVLDFAFDDVDRAKL 153


>gi|91788289|ref|YP_549241.1| hypothetical protein Bpro_2424 [Polaromonas sp. JS666]
 gi|123164890|sp|Q12AU9|RIMP_POLSJ RecName: Full=Ribosome maturation factor rimP
 gi|91697514|gb|ABE44343.1| protein of unknown function DUF150 [Polaromonas sp. JS666]
          Length = 200

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 70/181 (38%), Gaps = 35/181 (19%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-----DGNMTLRDCEELSQAISPI 79
           +   I+  +  + +  V+I        LL++ ++       +  +   DCE++++ +  +
Sbjct: 3   LQETIEQTVTGLGYELVEIERTGGG--LLRVTIDMPYVSGAEQFINAEDCEKVTRQLQFV 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS-----------GDK 128
           L+VE     + RLEVSSPGIDRP+  + DF R+ G +V   +                ++
Sbjct: 61  LEVE--GADYSRLEVSSPGIDRPLRNEKDFERFAGELVDITLKAPIGVAASAGSAVSANR 118

Query: 129 QKLIGKI------MGTSETGFFLEKEKRGEKDMNELQIAIS---------FDSLLSARLI 173
           +K  G +       G +        E   +      +  +           D +  ARL 
Sbjct: 119 KKFRGTLERAAPKDGVAGWQIVWSDEPPVKPGQKVSKKKLPAPLQALGFTLDEIHQARLA 178

Query: 174 V 174
            
Sbjct: 179 P 179


>gi|58337538|ref|YP_194123.1| hypothetical protein LBA1260 [Lactobacillus acidophilus NCFM]
 gi|75357528|sp|Q5FJN2|RIMP_LACAC RecName: Full=Ribosome maturation factor rimP
 gi|58254855|gb|AAV43092.1| hypothetical protein LBA1260 [Lactobacillus acidophilus NCFM]
          Length = 158

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
             +   +  V++ +I+E     V +  ++EK+   L+I+V+R+   + + +   LS+ IS
Sbjct: 2   SKVVNLVRPVVESIIDEHGDMLVNMEYIKEKSQNYLRIYVDREPNGIDIDEIAVLSELIS 61

Query: 78  PILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD    + +   Y LE+SSPG +RP+  K+D+ +     +   +     DK+   G +
Sbjct: 62  EKLDTLDPDPLPDPYVLELSSPGAERPIKTKADWEKALNDYIHVGLYQKIEDKKMYEGTL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              ++    LE + +         + +    + + R
Sbjct: 122 KSYNDDEIILEVKDK----TRRKTLTVPRKLIANIR 153


>gi|239982634|ref|ZP_04705158.1| hypothetical protein SalbJ_24601 [Streptomyces albus J1074]
 gi|291454475|ref|ZP_06593865.1| UPF0090 protein [Streptomyces albus J1074]
 gi|291357424|gb|EFE84326.1| UPF0090 protein [Streptomyces albus J1074]
          Length = 174

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 6/158 (3%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               L+  +  +I+P++        ++++    K  +L++ V+ DD  + L  C +LS+ 
Sbjct: 1   MSTTLSDRLRELIEPLVSSQELDLEEVTVTPAGKRRVLRVVVDSDD-GVQLDTCADLSRT 59

Query: 76  ISPILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +S  LD  +++    Y LEV+SPG DRP+     F+R  G +V   +       ++L+ +
Sbjct: 60  VSARLDETDLMGESEYVLEVTSPGADRPLSEYRHFVRATGRLVKFHLT-PDAGAEELVAR 118

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           I    E G  LE    G K     Q  +    +  AR+
Sbjct: 119 IEAVDEEGLDLEV--PGVKGRKPKQRRLPLKDVARARV 154


>gi|332638632|ref|ZP_08417495.1| ribosome maturation protein RimP [Weissella cibaria KACC 11862]
          Length = 228

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 72/163 (44%), Gaps = 7/163 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + +V+ P + +  F    +   +   +++L++ V+R DG + + D   L++ I  
Sbjct: 3   NVVETVQAVLAPELADQGFDLWDVIYEKQGSDMVLRVLVDRLDGAINMDDLVMLTETIGE 62

Query: 79  ILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            +D    +     Y ++VSSPG +R + R  D+       +   +      + +  G+++
Sbjct: 63  RMDQIEPDPFPEAYLMDVSSPGAERELKRPQDYEWALEKYIHVALNQEVDGENEFDGELL 122

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELL 179
             ++    L    +G++     +I +   ++  A L ++ E +
Sbjct: 123 AVTDDMLTLAITVKGKRK----RIDVPRTAIKQANLTISQERI 161


>gi|33596481|ref|NP_884124.1| hypothetical protein BPP1860 [Bordetella parapertussis 12822]
 gi|51316795|sp|Q7W9A7|RIMP_BORPA RecName: Full=Ribosome maturation factor rimP
 gi|33566250|emb|CAE37161.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 168

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 16/161 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R D  + + DCE++S+ +S + +V
Sbjct: 2   ADLFALTEEALAGMDIELVDVERAAMG--LLRVTIDRVD-GVRIEDCEQVSRQLSHVYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           ENI   + RLEV SPG+DRP+  +++F R+ G  +  ++  +   ++   G +      G
Sbjct: 59  ENI--DYKRLEVGSPGVDRPLRNEAEFRRFAGERIEIKLREALDGRKVFSGTLRAPEADG 116

Query: 143 FFLEKEKRG-----------EKDMNELQIAISFDSLLSARL 172
              + +  G            K  +   ++ + D +  A+L
Sbjct: 117 ASGQDDTAGAGKAVFGLEFEAKKNDIQVLSFTLDDIERAKL 157


>gi|260221429|emb|CBA29983.1| UPF0090 protein Daci_2988 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 199

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 39/185 (21%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-----------DGNMTLRDCEELS 73
           +  +++  +  + +  V+I        LL+I ++             +  + + DCE+++
Sbjct: 3   LQEIVEQTVAGLGYDLVEIERSAGG--LLRITIDLPWVAPVEGQPVSEQFVNVEDCEKVT 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------- 126
           + +   L+V+ +   + RLEVSSPGIDRP+    DF R+ GHV+   +    G       
Sbjct: 61  RQLQFALEVDGV--EYKRLEVSSPGIDRPLRHTQDFERFAGHVIDITLKAPMGAAANGQV 118

Query: 127 --DKQKLIGKIMGT----SETGFFLEKEKRGEKDMNELQ-----------IAISFDSLLS 169
             +++K  G +         TG+ +      E    +             +  +FD L  
Sbjct: 119 SANRKKFRGTLERVPAADGSTGWQIVWSDAPEVKPGQKVSKKRVPPPLQALGFAFDELRD 178

Query: 170 ARLIV 174
           ARL  
Sbjct: 179 ARLAP 183


>gi|310658998|ref|YP_003936719.1| hypothetical protein CLOST_1694 [Clostridium sticklandii DSM 519]
 gi|308825776|emb|CBH21814.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 152

 Score = 91.6 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 81/157 (51%), Gaps = 12/157 (7%)

Query: 21  LAGDISSVIQPVIEEM---SFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAI 76
           +A  +  +I+ ++ +M    F  V +  ++E +   L+I++++  G M+L DC+  S  I
Sbjct: 1   MASKLELLIEGIVSDMITDPFELVDVEYVKEGSLKYLRIYIDK-QGKMSLDDCQHFSHLI 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  + IE +Y LE+SSPG+DR + ++ DF+R  G  V  ++  +    ++  G ++
Sbjct: 60  SEKLDELDPIEENYMLEISSPGLDRHLKKEKDFIREKGKEVELKLFKAIDGVKEFEGTLV 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           G       L ++   E   ++  +     ++   RL+
Sbjct: 120 G-------LSEDNEIEVQTSKGLMKFPKKNVAVIRLM 149


>gi|153813000|ref|ZP_01965668.1| hypothetical protein RUMOBE_03407 [Ruminococcus obeum ATCC 29174]
 gi|149830947|gb|EDM86037.1| hypothetical protein RUMOBE_03407 [Ruminococcus obeum ATCC 29174]
          Length = 129

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +++ P++E   F  V +  ++E  N  L+ ++++  G +T+ DCE +S+A S  L
Sbjct: 35  EQKAEALLAPIVEGQGFELVDVEYVKEAGNWYLRGYIDKP-GGITVNDCEAVSRAFSDKL 93

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKS 107
           D  + IE  Y +E+SSPG+DRP+ R+ 
Sbjct: 94  DENDFIEDSYIMEISSPGLDRPLKRRR 120


>gi|16329286|ref|NP_440014.1| hypothetical protein slr0742 [Synechocystis sp. PCC 6803]
 gi|1651766|dbj|BAA16694.1| slr0742 [Synechocystis sp. PCC 6803]
          Length = 176

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 9/145 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  DI ++ QP+ E++       +    ++  +L+I +     + +L DCE  S++    
Sbjct: 30  VIPDILALAQPIAEDLGLEVTDAVFQTNKRPPVLRIDIRNLQQDTSLNDCEAFSRSFEAQ 89

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+  ++I   Y LEVSSPGI   +  + DF+ + G  V          + +  G + G  
Sbjct: 90  LEESSLIASAYVLEVSSPGISPYLATERDFIAFKGFEVVVTSDNPHQGQSQWQGSLQGRD 149

Query: 140 ETGFFLEKEKRGEKDMNELQIAISF 164
               +L    R         +AI  
Sbjct: 150 GEAVYLSIRGR--------TVAIPL 166


>gi|308233944|ref|ZP_07664681.1| hypothetical protein AvagD15_02782 [Atopobium vaginae DSM 15829]
 gi|328943956|ref|ZP_08241421.1| hypothetical protein HMPREF0091_10646 [Atopobium vaginae DSM 15829]
 gi|327491925|gb|EGF23699.1| hypothetical protein HMPREF0091_10646 [Atopobium vaginae DSM 15829]
          Length = 156

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 13/164 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD---GNMTLRDCEE 71
                +   +   ++          V + L   +   ++++ ++  D     +TL +   
Sbjct: 1   MSLEDIQTTLLKALEEAATPRGIDIVDVELAGTRTAPVIRLRIDHLDETLPTITLDEVAA 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            S+ I+ +LD  + I+  Y LEVSSPG+ RP+ R  DF R+ G  V      +   +++ 
Sbjct: 61  QSEWINEVLDSLDPIDSSYTLEVSSPGLARPLRRIHDFERFCGQEVELVTR-ALEGRKRF 119

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            GK+       F L  + +         +  + D + S ++  T
Sbjct: 120 TGKLSSVEGNTFTLIVDGQD--------MTFTIDDVKSCKIKPT 155


>gi|322436507|ref|YP_004218719.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX9]
 gi|321164234|gb|ADW69939.1| protein of unknown function DUF150 [Acidobacterium sp. MP5ACTX9]
          Length = 207

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 72/200 (36%), Gaps = 48/200 (24%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDG------------------- 62
             I +  + V        V +          L++F+E+D                     
Sbjct: 6   DTIRATAERVAASHHLEVVDVEFSGGAKFRSLRVFIEKDAESRAKLAAQLTAAQEASDSV 65

Query: 63  -------------------NMTLRDCEELSQAISPILDVENIIEG-HYRLEVSSPGIDRP 102
                               +T  DC + ++    +LDVE+ I G  Y LEVSSPG++R 
Sbjct: 66  EVGFELPVLPSGVPVESLSGVTHEDCADFARDFGTVLDVEDTIPGAEYTLEVSSPGLERK 125

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNE----- 157
           + + +DF R++G ++  +   +    +   G++ G +     +  +    K   +     
Sbjct: 126 LAKPADFARFSGFLIKLQTFTAVDGNRHFQGRLTGFNPEAQTIALDPSAVKQKGKSKKSA 185

Query: 158 ---LQIAISFDSLLSARLIV 174
                + I+F ++  A LI 
Sbjct: 186 AAPQPVEIAFQNVEKANLIP 205


>gi|297562527|ref|YP_003681501.1| hypothetical protein Ndas_3595 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846975|gb|ADH68995.1| protein of unknown function DUF150 [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 160

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 11/149 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              I+ +++PV+ E       + L    K  +L++ V+  D  + L    E+SQ ++ +L
Sbjct: 7   EERIAELLEPVLAEAGLDLEAVELTPAGKRRVLRVVVDS-DNGVDLDTVGEVSQEVNTLL 65

Query: 81  DVENIIE-GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  +++    Y LEV+SPG+DRP+ +   + R  G +V   +        K+ G++ G  
Sbjct: 66  DSSDVMGAQPYVLEVTSPGVDRPLTQPRHWRRSRGRLVIASLAEGG----KVTGRVTGAD 121

Query: 140 ETGFFLEKEKR----GEKDMNELQIAISF 164
           + G  L+ E +       ++ + ++ + F
Sbjct: 122 DDGVTLDVEGQPRTFTHAELGKGRVQVEF 150


>gi|58427438|gb|AAW76475.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 160

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 11/127 (8%)

Query: 54  QIFVE-----RDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
           +++++     + +  + + DCE +S+ +S  LDVE+ I GHY LEVSSPG+DRP+     
Sbjct: 2   RLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGHYTLEVSSPGVDRPLFTLEQ 61

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           F R  G      + L+   +++  G+I+                  ++   + I FD++ 
Sbjct: 62  FARHAGESTKIVLKLAQDGRRRFQGEILRIDAEA------GAVVFAIDGKDVQIGFDNID 115

Query: 169 SARLIVT 175
            AR++  
Sbjct: 116 KARILPD 122


>gi|124002856|ref|ZP_01687708.1| 15 kDa protein [Microscilla marina ATCC 23134]
 gi|123992084|gb|EAY31471.1| 15 kDa protein [Microscilla marina ATCC 23134]
          Length = 152

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 75/156 (48%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++++I+  +E   +  + + L  +K    L + ++  D  +++  C  LS+ + 
Sbjct: 1   MNQEEKLTTLIKEHLEPE-YFLIDVILKNQKPKAKLTVLIDG-DQGVSIDRCATLSRWLG 58

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             ++ EN+IEG Y LEVSSPG+D P+  +  +++  G  V   +           G +  
Sbjct: 59  KYIEEENLIEGAYTLEVSSPGVDLPLKNQRQYIKNIGRKVKVSLNEGGNK----TGVLEK 114

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             +    ++ EK+G+    + +  I FD ++  +++
Sbjct: 115 VEDKLIVIQPEKKGKIIPEKEE--IPFDQIMKTKVM 148


>gi|241764250|ref|ZP_04762281.1| protein of unknown function DUF150 [Acidovorax delafieldii 2AN]
 gi|241366373|gb|EER60895.1| protein of unknown function DUF150 [Acidovorax delafieldii 2AN]
          Length = 197

 Score = 91.2 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 37/183 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-------------DGNMTLRDCEE 71
           +  V++ ++  + +  V+I        LL++ ++               +  +T+ DCE+
Sbjct: 3   LQQVVEQIVTGLGYDLVEIERSPGG--LLRVTIDLPWVQPTVDAPVPATEQFITVEDCEK 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG----- 126
           +++ +   L+V+ +   + RLEVSSPGIDRP+  + DF+R+ G V+   +    G     
Sbjct: 61  VTRQLQFALEVDGV--EYKRLEVSSPGIDRPLRHEQDFVRFEGSVIDLTLKAPIGAAAAG 118

Query: 127 ----DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ-----------IAISFDSLLSAR 171
                ++K  G +      G+ +           +             +  + D L  AR
Sbjct: 119 QVSATRKKFRGLLSRAESGGWQIVWSDEPAVKPGQKVSKKRVPAPLQALGFTLDELRDAR 178

Query: 172 LIV 174
           L  
Sbjct: 179 LAP 181


>gi|121594901|ref|YP_986797.1| hypothetical protein Ajs_2563 [Acidovorax sp. JS42]
 gi|120606981|gb|ABM42721.1| protein of unknown function DUF150 [Acidovorax sp. JS42]
          Length = 219

 Score = 90.8 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 38/184 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMTLRDCE 70
           +  +++  +  + +  V+I        LL+I ++                +  +T+ DCE
Sbjct: 25  LQQIVEQTVAGLGYDLVEIERSAGG--LLRITIDLVWVPPTDEVSAAVGAEQFITVEDCE 82

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---- 126
           ++++ +   L+VE +   + RLEVSSPGIDR +  ++DF R+ G V+   +    G    
Sbjct: 83  KVTRQLQFALEVEGV--DYTRLEVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAG 140

Query: 127 -----DKQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSA 170
                +++K  G +      G+ +               +         +  + D L  A
Sbjct: 141 GQVHANRKKFRGALERADSGGWQIVWSDEPPVKPGQRISKKRVPAPLQALGFTLDELREA 200

Query: 171 RLIV 174
           RL  
Sbjct: 201 RLAP 204


>gi|282854641|ref|ZP_06263976.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|282582223|gb|EFB87605.1| conserved hypothetical protein [Propionibacterium acnes J139]
          Length = 199

 Score = 90.8 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 13/176 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER---DDGNMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++    D    +L +  E +  IS
Sbjct: 24  AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 83

Query: 78  PILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ---KLIG 133
             LD    +    Y LEVSS G+  P+ +   + R  GH+V   +   +  ++      G
Sbjct: 84  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTL-NPAEGQKSGETFDG 142

Query: 134 KIMGTSETGFFLEKEKRGEKDMNE--LQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +I    E    LE E    K          +    +  A  +V  EL R       
Sbjct: 143 RIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 196


>gi|33592373|ref|NP_880017.1| hypothetical protein BP1245 [Bordetella pertussis Tohama I]
 gi|33602224|ref|NP_889784.1| hypothetical protein BB3248 [Bordetella bronchiseptica RB50]
 gi|51316792|sp|Q7VYR4|RIMP_BORPE RecName: Full=Ribosome maturation factor rimP
 gi|51316959|sp|Q7WHG0|RIMP_BORBR RecName: Full=Ribosome maturation factor rimP
 gi|33572018|emb|CAE41541.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|33576662|emb|CAE33740.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
 gi|332381789|gb|AEE66636.1| hypothetical protein BPTD_1235 [Bordetella pertussis CS]
          Length = 168

 Score = 90.8 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 16/161 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R D  + + DCE++S+ +S + +V
Sbjct: 2   ADLFALTEEALAGMDIELVDVERAAMG--LLRVTIDRVD-GVRIEDCEQVSRQLSRVYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           ENI   + RLEV SPG+DRP+  +++F R+ G  +  ++  +   ++   G +      G
Sbjct: 59  ENI--DYKRLEVGSPGVDRPLRNEAEFRRFAGERIEIKLREALDGRKVFSGTLRAPEADG 116

Query: 143 FFLEKEKRG-----------EKDMNELQIAISFDSLLSARL 172
              + +  G            K  +   ++ + D +  A+L
Sbjct: 117 ASGQDDTAGAGKAVFGLEFEAKKNDIQVLSFTLDDIERAKL 157


>gi|218282330|ref|ZP_03488620.1| hypothetical protein EUBIFOR_01202 [Eubacterium biforme DSM 3989]
 gi|218216703|gb|EEC90241.1| hypothetical protein EUBIFOR_01202 [Eubacterium biforme DSM 3989]
          Length = 173

 Score = 90.8 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 8/160 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                  ++   I+ V+ E       +  +  +   LL++ VE++DG M L  C   S  
Sbjct: 17  TKEKCMDNLKEWIEEVLNENGCHLYDLEWITNQGTPLLRVSVEKEDGTMDLDTCASCSDV 76

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I  +LD ++     Y LEV SPG +R +    +  R  G  V  ++        ++IG +
Sbjct: 77  IGQMLDEKDWYSHEYMLEVCSPGAERELRTDEEVQRAVGKYVFVKMKDPKQGLDQVIGDL 136

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
           +  +E    +    +        +I I   ++    LI+T
Sbjct: 137 VEATENDVTISYRDK----TRTKKITIEKSNIQ---LIMT 169


>gi|313889634|ref|ZP_07823277.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121931|gb|EFR45027.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 176

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 9/167 (5%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDC 69
            E  +  +  +   +   + PVI    F  V +   +   + LL I V+R +G +T+ D 
Sbjct: 14  KEGIVIANQHIIDTVMETVSPVIRP-PFELVDVEYEKMGSDYLLSILVDR-EGGITVEDT 71

Query: 70  EELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
            EL++ ISP+LD    +     Y LEVSSPG++RP+  K    +  G  V   +  +   
Sbjct: 72  TELTEIISPLLDQISPDPFPDQYMLEVSSPGLERPLKTKEAIEKAVGSYVNVSLYKAIDK 131

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +   G ++        ++   +         +AI + ++  ARL V
Sbjct: 132 VKVFQGDLISFDGETLMIDYLDK----TRHKVVAIPYQTVAKARLAV 174


>gi|314923906|gb|EFS87737.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
 gi|314966034|gb|EFT10133.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
 gi|314981919|gb|EFT26012.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
 gi|315090734|gb|EFT62710.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
 gi|315094982|gb|EFT66958.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
 gi|327328083|gb|EGE69852.1| hypothetical protein HMPREF9341_01135 [Propionibacterium acnes
           HL103PA1]
          Length = 178

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 13/176 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER---DDGNMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++    D    +L +  E +  IS
Sbjct: 3   AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 62

Query: 78  PILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ---KLIG 133
             LD    +    Y LEVSS G+  P+ +   + R  GH+V   +   +  ++      G
Sbjct: 63  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTL-NPAEGQKSGETFDG 121

Query: 134 KIMGTSETGFFLEKEKRGEKDMNE--LQIAISFDSLLSARLIVTDELLRASLNNYG 187
           +I    E    LE E    K          +    +  A  +V  EL R       
Sbjct: 122 RIAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 175


>gi|159027909|emb|CAO89716.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 156

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+  +  P+ E +    V I     ++  +L++ +    G+  L DCE++S+++   
Sbjct: 5   LIPDLLHLATPIAENLGLEVVDIVFQTNKRPPVLRVDIRNLAGDTGLEDCEQMSRSLETA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD + I+ G Y LE+SSPGI R +  + +F  + G  V      S G  Q+  GK+ G  
Sbjct: 65  LDSQEILPGAYVLEISSPGISRQLSSEREFHSFKGFPVIVTGQDSQGKPQEWRGKLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           E   +L ++ R         I++  D 
Sbjct: 125 EQSIYLNQKGRSLTIDRTTVISVRLDE 151


>gi|89900916|ref|YP_523387.1| hypothetical protein Rfer_2132 [Rhodoferax ferrireducens T118]
 gi|122479183|sp|Q21WJ7|RIMP_RHOFD RecName: Full=Ribosome maturation factor rimP
 gi|89345653|gb|ABD69856.1| protein of unknown function DUF150 [Rhodoferax ferrireducens T118]
          Length = 204

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 47/205 (22%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD----------DGNMTLRDCEELSQ 74
           +  +++  +  + +  V+I        LL+I ++            +  +T+ DCE++++
Sbjct: 3   LKEIVEQTVAGLGYDLVEIERSAGG--LLRITIDLPWVPGTAGSEAEQFVTVEDCEKVTR 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-------- 126
            +   L+V+ +   + RLEVSSPGIDRP+    DF R+ G  +   +    G        
Sbjct: 61  QLLFALEVDGV--DYKRLEVSSPGIDRPLRHGQDFERFVGREIDVTLKAPIGAAAGALVN 118

Query: 127 -DKQKLIGKIMGTSETG----------FFLEKEKRGEKDMNELQIAIS---------FDS 166
             ++K  G +  T  +                    +      +  +           D 
Sbjct: 119 ATRKKFRGTLERTQSSNGESGVVPGWQIVWSDAPEVKPGQRVSKKRLPAPLQALGFTLDE 178

Query: 167 LLSARLIVTDELLRASLNNYGSYAG 191
           L  ARL         S    G+ AG
Sbjct: 179 LKEARLAPIV-----SFKGRGAKAG 198


>gi|317121852|ref|YP_004101855.1| hypothetical protein Tmar_1015 [Thermaerobacter marianensis DSM
           12885]
 gi|315591832|gb|ADU51128.1| protein of unknown function DUF150 [Thermaerobacter marianensis DSM
           12885]
          Length = 153

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 31  PVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           P+ E      + ++     +   LQ  V+R  G +T+ +C   SQA+ P+L     ++  
Sbjct: 16  PLAEARGLVLLDVAYRREGRRWFLQCVVDRP-GGVTMDECAAFSQALDPVLAGVEGLDED 74

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
             +EV SPG+DR +    +F  + G  V          +++ +G++ G  +    +  E+
Sbjct: 75  VVVEVMSPGLDRTLRNDREFDWFRGREVEVATFRPVEGRRRFVGRLEGLEDGDVVITDEE 134

Query: 150 RGEKDMNELQIAISFDSLLSARLIV 174
                       I  D++  A+L V
Sbjct: 135 GAH--------RIPRDAVAKAQLYV 151


>gi|330466359|ref|YP_004404102.1| hypothetical protein VAB18032_11940 [Verrucosispora maris
           AB-18-032]
 gi|328809330|gb|AEB43502.1| hypothetical protein VAB18032_11940 [Verrucosispora maris
           AB-18-032]
          Length = 175

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 15/157 (9%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE---- 83
           +I PV++   +    +S+       +   +   DG + L    ++S+A+S  LD      
Sbjct: 1   MIAPVVDSAGYDLEDLSVSRAGRRHVVRVIVDADGGINLDAVADVSRAVSAALDAAEESG 60

Query: 84  -NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------DKQKLIGKIM 136
            +I+ G Y+LEVSSPG+DRP+     + R  G +V   +  +          +++ G+++
Sbjct: 61  GDIVAGEYQLEVSSPGVDRPLTLPRHWRRNVGRLVRVTVRGAGESGARPAGDRQVTGRVV 120

Query: 137 GTSETGFFLEKEKR----GEKDMNELQIAISFDSLLS 169
              +    LE +         D+   ++ + F  L  
Sbjct: 121 AADDESVALEVDGERVQWPYADLGPGRVQVEFSRLDE 157


>gi|34223734|sp|P72687|RIMP_SYNY3 RecName: Full=Ribosome maturation factor rimP
          Length = 151

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 9/145 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  DI ++ QP+ E++       +    ++  +L+I +     + +L DCE  S++    
Sbjct: 5   VIPDILALAQPIAEDLGLEVTDAVFQTNKRPPVLRIDIRNLQQDTSLNDCEAFSRSFEAQ 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+  ++I   Y LEVSSPGI   +  + DF+ + G  V          + +  G + G  
Sbjct: 65  LEESSLIASAYVLEVSSPGISPYLATERDFIAFKGFEVVVTSDNPHQGQSQWQGSLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISF 164
               +L    R         +AI  
Sbjct: 125 GEAVYLSIRGR--------TVAIPL 141


>gi|325962804|ref|YP_004240710.1| hypothetical protein Asphe3_14020 [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468891|gb|ADX72576.1| uncharacterized conserved protein [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 192

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 72/158 (45%), Gaps = 11/158 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG---NMTLRDCEELSQAISP 78
           A  + ++++P ++        ++++   + ++ + V+        + L    ++S+ +S 
Sbjct: 16  AARLRALLEPAVQANRLYLEDVAIVAGSHRVVHVVVDLPQEETGGVGLDVIADISKVLSD 75

Query: 79  ILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +LD +   +G  Y LEVSSPG+ RP+     + R  G +V   ++        + G+I  
Sbjct: 76  VLDNDPGDDGRPYDLEVSSPGVGRPLTEPRHWHRAKGRLVKVNVLQGDN----VTGRIQA 131

Query: 138 TSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
             + G  +  E   K+G K      + + FD + + ++
Sbjct: 132 VDDAGVTIVPEIAVKKGMKPRQGDPVKLPFDRIRNGKV 169


>gi|294339929|emb|CAZ88292.1| conserved hypothetical protein [Thiomonas sp. 3As]
          Length = 191

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 5/118 (4%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVEN 84
           +  I   +  +    V++  L     LL++ ++  DG  +T+ DCE +++ +  + +VEN
Sbjct: 4   AQAIDTAVTSLGLELVEVEHLPRG--LLRVTIDHADGAPVTVEDCERVTRQLQYVFEVEN 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +   + RLEVSSPG+DRP+ +  DF+R+ G  +   + +    ++K  G ++  S+  
Sbjct: 62  V--DYGRLEVSSPGLDRPLRKSEDFVRFAGLEIDVVLRVPFQGRKKYRGVLLERSQDD 117


>gi|294815428|ref|ZP_06774071.1| Conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326443781|ref|ZP_08218515.1| ribosome maturation protein RimP [Streptomyces clavuligerus ATCC
           27064]
 gi|294328027|gb|EFG09670.1| Conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 165

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I L    +   L+I V+ +D   TL  C ELS+AIS  LD
Sbjct: 7   ERLRELLEPLVTAAGLDLEEIELARAGRRRQLRIVVDSED-GATLDACAELSRAISQKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + E  Y LEVSSPG DRP+     ++R  G +V   +         L+ +++   +
Sbjct: 66  ESDAMGEDEYVLEVSSPGADRPLTEHRHYVRATGRLVKLHLADGGE----LVARVLTVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE      +     ++   F  +  AR+
Sbjct: 122 EGLDLEVPGVKGRKPTARRVT--FADIAKARV 151


>gi|317495159|ref|ZP_07953529.1| hypothetical protein HMPREF0432_00131 [Gemella moribillum M424]
 gi|316914581|gb|EFV36057.1| hypothetical protein HMPREF0432_00131 [Gemella moribillum M424]
          Length = 154

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + ++     ++  +    +  ++E +   L+I+ ++ DG +TL DC  LS+ ++
Sbjct: 1   MSIVQRVKAIADEQTKDTVYSLYDVEYVKEGSEFFLRIYFDK-DGGLTLDDCVLLSEKLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E+ I   Y LEVSSPGI+R +    + +   G  V  +      ++++  G I+ 
Sbjct: 60  EELDKEDFISDKYYLEVSSPGIERELRNLEEVIDSIGKHVYIKTYEKVDNQKEFYGDILD 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    +E + +     +     IS++ +   RL V
Sbjct: 120 VEDKEITIEYKDKARVKKS----IISYEKIAKIRLAV 152


>gi|260889855|ref|ZP_05901118.1| UPF0090 protein [Leptotrichia hofstadii F0254]
 gi|260860461|gb|EEX74961.1| UPF0090 protein [Leptotrichia hofstadii F0254]
          Length = 162

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             +  +    I+  ++EM+     +  + +     L+++VE+ DG  TL DC + S+ I 
Sbjct: 2   EQILNEFEKKIKQHLKEMNLELADLEYVRDGGYNYLRVYVEKLDGTTTLDDCIDFSREID 61

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            I   +++IE  + LEVS+PG++R + +  DF+R+ G  +  +   +    +K IGK+  
Sbjct: 62  GI--ADDLIEEKFFLEVSTPGVERRLRKPKDFVRFLGERINVQAKSNIEGAKKFIGKLEK 119

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 FL  +K       E  + I    L  A LI
Sbjct: 120 FENDTVFLLDDK------LEKIVEIPLSKLKKANLI 149


>gi|257784635|ref|YP_003179852.1| hypothetical protein Apar_0832 [Atopobium parvulum DSM 20469]
 gi|257473142|gb|ACV51261.1| protein of unknown function DUF150 [Atopobium parvulum DSM 20469]
          Length = 164

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 13/159 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN---MTLRDCEE 71
             + G+   I S ++          V + ++   KN L+++ ++ DD     ++L +  +
Sbjct: 1   MQNEGVTQKILSALEQAALNHHIDIVDVEIVGSSKNPLVRVRIDHDDETEETISLDEVAQ 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
            +  IS  +D  +     + LEVSSPG+ RP+ R  DF+R+ G  V  +   ++  ++K 
Sbjct: 61  ETSWISETIDELDPFPASFTLEVSSPGMARPLRRAKDFVRFAGQEVQLQTT-ATEGRRKF 119

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            G ++G   T   ++ E             I    L   
Sbjct: 120 TGTLLGIEGTTISIQTEDEVC--------TIDLSELKKC 150


>gi|296135766|ref|YP_003643008.1| protein of unknown function DUF150 [Thiomonas intermedia K12]
 gi|295795888|gb|ADG30678.1| protein of unknown function DUF150 [Thiomonas intermedia K12]
          Length = 191

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 5/118 (4%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVEN 84
           +  I   +  +    V++  L     LL++ ++  DG  +T+ DCE +++ +  + +VEN
Sbjct: 4   AQAIDTAVTSLGLELVEVEHLPRG--LLRVTIDHADGAPVTVEDCERVTRQLQYVFEVEN 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +   + RLEVSSPG+DRP+ +  DF+R+ G  +   + +    ++K  G ++  S+  
Sbjct: 62  V--DYGRLEVSSPGLDRPLRKAEDFVRFAGLEIDVVLRVPFQGRKKYRGVLLERSQDD 117


>gi|333024105|ref|ZP_08452169.1| hypothetical protein STTU_1611 [Streptomyces sp. Tu6071]
 gi|332743957|gb|EGJ74398.1| hypothetical protein STTU_1611 [Streptomyces sp. Tu6071]
          Length = 197

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        ++++    +  +LQI V+  D  ++L  C ELS+ IS +LD
Sbjct: 21  ERLRELVEPLVTARDLDLEEVTVTPAGRRRVLQIVVDG-DSGVSLDTCAELSREISTVLD 79

Query: 82  VENIIEGHYR-LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +  +   LEV+SPG DRP+     ++R  G +V  ++         L+ +++   +
Sbjct: 80  DTDAMGENEYVLEVTSPGADRPLTAHRHYVRATGRLVRFQLAEGGE----LVARLLKADD 135

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE      +     ++      +  AR+
Sbjct: 136 AGLDLEVPGVKGRKPTSRRLEFP--EISKARV 165


>gi|284030870|ref|YP_003380801.1| hypothetical protein Kfla_2937 [Kribbella flavida DSM 17836]
 gi|283810163|gb|ADB32002.1| protein of unknown function DUF150 [Kribbella flavida DSM 17836]
          Length = 178

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 15/150 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + + ++P++E+         +    +  LL++ V+R DG ++L D  ++++AIS  LD +
Sbjct: 13  LENFLRPLVEQFGCDLEAAEVTPAGRRRLLRVLVDR-DGGISLDDVADVTRAISKALDAD 71

Query: 84  NII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +++ +G Y LEVSSPG+DRP+     + R    +VA  +        KL G+I   S+  
Sbjct: 72  DVMGDGAYTLEVSSPGVDRPLTLPRHWRRNISRLVAVTLHSGD----KLTGRIKTVSDET 127

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             L+ +             +++  +  A++
Sbjct: 128 ADLDVDGTLR--------TVAYADVDKAKV 149


>gi|293400741|ref|ZP_06644886.1| putative SP14.3 protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305767|gb|EFE47011.1| putative SP14.3 protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 155

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 5/150 (3%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            I  +I+P++ +       +S  +  KN +LQ+ + R DG+M +  C  +S+ IS  LD 
Sbjct: 6   KIKELIKPLLAQEDIELYDVSWQQEGKNRILQVAIMRKDGSMDIDTCAAMSEKISEKLDE 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            ++I   Y LEV SPG +R +  ++         V  ++         + G +       
Sbjct: 66  VDMIASEYFLEVCSPGAERELKDETQIQDALDEYVYVKLKNPKAGMDAVKGYLRAYENGD 125

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             +E   +  K     +I I  D++   RL
Sbjct: 126 ITMEYMDKAVKK----KITIDGDNIALIRL 151


>gi|297156813|gb|ADI06525.1| hypothetical protein SBI_03404 [Streptomyces bingchenggensis BCW-1]
          Length = 180

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        ++ +    K  +L+I V+ DD  + L  C ELS+AIS  LD
Sbjct: 7   ERLRGLLEPLVSARDLDLEEVEVTPAGKRRVLRIVVDSDD-GVQLDACAELSRAISQTLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +    Y LEV+SPG DRP+     + R  G ++   +         L+ +I    +
Sbjct: 66  DTDAMGRHPYVLEVTSPGADRPLTEPRHYRRAAGRLMKARLAEGGE----LVARITAVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  L+ E  G K        ++F  +  AR+
Sbjct: 122 EG--LDVEVPGVKGRRPTARRLAFKEISKARV 151


>gi|313897501|ref|ZP_07831044.1| conserved hypothetical protein [Clostridium sp. HGF2]
 gi|312957871|gb|EFR39496.1| conserved hypothetical protein [Clostridium sp. HGF2]
          Length = 155

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 5/155 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  +I  ++ E       ++   E +  +LQ+ +   DG+M +  C   S+ IS
Sbjct: 1   MDQIQKLKELITLLVAEDGIELYDVAWHTEGSMRILQVSIMHKDGSMDIDTCAAQSEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD  ++I   Y LEV SPG +R +  +       G  V  ++        ++ G +  
Sbjct: 61  TMLDEMDMIASEYFLEVCSPGAERELKSEEQIRDAIGEFVYVKLKNPRAGMDEIKGTLTA 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 +L+   +  K   E    I  D++   RL
Sbjct: 121 FENNTVYLDYMAKAVKKKAE----IEMDNIALIRL 151


>gi|229820978|ref|YP_002882504.1| protein of unknown function DUF150 [Beutenbergia cavernae DSM
           12333]
 gi|259585729|sp|C5BWS6|RIMP_BEUC1 RecName: Full=Ribosome maturation factor rimP
 gi|229566891|gb|ACQ80742.1| protein of unknown function DUF150 [Beutenbergia cavernae DSM
           12333]
          Length = 162

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 70/160 (43%), Gaps = 14/160 (8%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN--MTLRDCEELSQ 74
           D  L G +  +++PV          +++    +   +++ ++  DG   +   D  + S+
Sbjct: 6   DTALLGRLRDLLEPVAAGCGLHLEDVAVSPAGRRRRVRVTLDLADGPGALGSNDLADASR 65

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           A+S  LD  +++ G Y LEVS+PG DRP+ +   F R  G +V   +   +     + G+
Sbjct: 66  AVSAALDDADVVTGPYVLEVSTPGTDRPLTQPRHFRRAQGRLVTLTLAAGTH----VSGR 121

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++   + G  +  +              ++  + + R+ V
Sbjct: 122 LLSADDDGIHVRTD-------AGATTTFAYADVATGRVEV 154


>gi|264677929|ref|YP_003277836.1| hypothetical protein CtCNB1_1794 [Comamonas testosteroni CNB-2]
 gi|262208442|gb|ACY32540.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
          Length = 192

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 36/182 (19%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD------------DGNMTLRDCEEL 72
           +  +++  +  + +  V+I        LL+I ++              +  +T+ DCE++
Sbjct: 3   LQQIVEQTVTGLGYDLVEIERSAGG--LLRITIDLPWQAPEEGAPELPEQFVTVEDCEKV 60

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------ 126
           ++ +   L+V+     + RLEVSSPGIDR +  + DF+R+ G  V   +    G      
Sbjct: 61  TRQLQFALEVD--GADYARLEVSSPGIDRLLRHEQDFIRFEGSEVDLTLKAPIGAAGGDK 118

Query: 127 ---DKQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSARL 172
              +++K  G +  T E G+ +               +  +      +  + D L  ARL
Sbjct: 119 INANRKKFRGTLERTEEGGWQIVWSDEPPPKPGVRVSKKREPAPLNAMGFTLDELREARL 178

Query: 173 IV 174
             
Sbjct: 179 AP 180


>gi|227497550|ref|ZP_03927778.1| YhbC family protein [Actinomyces urogenitalis DSM 15434]
 gi|226833004|gb|EEH65387.1| YhbC family protein [Actinomyces urogenitalis DSM 15434]
          Length = 154

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 16/159 (10%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD--GNMTLRDCEELSQA 75
                 ++ ++ PV+E+       +          +++ V+  D  G++ L    E++Q 
Sbjct: 7   TATTERLTELLTPVVEQAGLFLEGVETTRAGRYSTVRVIVDLPDGPGDLDLDAVAEVTQT 66

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  LD  + ++G Y LEV+SPG +R +     F R  GH             Q L G +
Sbjct: 67  VSDALDEADPVKGQYTLEVTSPGAERELTTPRTFRRATGHQARLVTA-----GQTLTGTV 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               E    +E +          +  I++  LL AR++V
Sbjct: 122 RSADEETVTVEVDG--------SEQTIAYTDLLEARMVV 152


>gi|313829612|gb|EFS67326.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
 gi|315109016|gb|EFT80992.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
          Length = 178

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 70/175 (40%), Gaps = 11/175 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDD---GNMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++ D       +L +  E +  IS
Sbjct: 3   AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 62

Query: 78  PILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGK 134
             LD    +    Y LEVSS G+  P+ +   + R  GH+V   +  +   K  +   G+
Sbjct: 63  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGR 122

Query: 135 IMGTSETGFFLEKEKRGEKDMNE--LQIAISFDSLLSARLIVTDELLRASLNNYG 187
           I    E    LE E    K          +    +  A  +V  EL R       
Sbjct: 123 IAEAGEEVVTLEVEAENSKPHKPLYTTREVQLADVAKA--VVQVELNRRDAQASK 175


>gi|221067738|ref|ZP_03543843.1| protein of unknown function DUF150 [Comamonas testosteroni KF-1]
 gi|220712761|gb|EED68129.1| protein of unknown function DUF150 [Comamonas testosteroni KF-1]
          Length = 192

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 36/182 (19%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD------------DGNMTLRDCEEL 72
           +  +++  +  + +  V+I        LL+I ++              +  +T+ DCE++
Sbjct: 3   LQQIVEQTVTGLGYDLVEIERSAGG--LLRITIDLPWQAPEEGVPELPEQFVTVEDCEKV 60

Query: 73  SQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG------ 126
           ++ +   L+V+     + RLEVSSPGIDR +  + DF+R+ G  V   +    G      
Sbjct: 61  TRQLQFALEVD--GADYARLEVSSPGIDRLLRHEQDFIRFEGSEVDLTLKAPIGAAGGDK 118

Query: 127 ---DKQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSARL 172
              +++K  G +  T E G+ +               +  +      +  + D L  ARL
Sbjct: 119 INANRKKFRGTLERTEEGGWQIVWSDEPPPKPGVRVSKKREPAPLNAMGFTLDELREARL 178

Query: 173 IV 174
             
Sbjct: 179 AP 180


>gi|289426404|ref|ZP_06428147.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|289153132|gb|EFD01850.1| conserved hypothetical protein [Propionibacterium acnes SK187]
          Length = 197

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 70/175 (40%), Gaps = 11/175 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDD---GNMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++ D       +L +  E +  IS
Sbjct: 22  AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 81

Query: 78  PILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGK 134
             LD    +    Y LEVSS G+  P+ +   + R  GH+V   +  +   K  +   G+
Sbjct: 82  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGR 141

Query: 135 IMGTSETGFFLEKEKRGEKDMNE--LQIAISFDSLLSARLIVTDELLRASLNNYG 187
           I    E    LE E    K          +    +  A  +V  EL R       
Sbjct: 142 IAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 194


>gi|149925032|ref|ZP_01913350.1| hypothetical protein PPSIR1_10025 [Plesiocystis pacifica SIR-1]
 gi|149814096|gb|EDM73722.1| hypothetical protein PPSIR1_10025 [Plesiocystis pacifica SIR-1]
          Length = 174

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 24/172 (13%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + + I+PV  +M + ++ I      +  +L++F++     +T+ DC  + + I   LD  
Sbjct: 1   MEAAIEPVCADMGYEALLIEWSGSGQRRVLRVFLDSP-KGVTIADCTRMGRLIGNSLDAA 59

Query: 84  N--------------IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI----VLSS 125
                          ++   Y LEVSSPG+DRP+ +K  F    G  V  +       + 
Sbjct: 60  EAAVEAGEGNPALAALLAPGYTLEVSSPGVDRPLAKKRHFTAQVGGRVKLKTWESPAAAD 119

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRG----EKDMNELQIAISFDSLLSARLI 173
            D++   G+++   +     E ++RG         +  I I    +  A L+
Sbjct: 120 ADERSFNGRLVAVHDDDAAPEDQRRGTVVVHDPERDRTIPIPLPLIRRANLV 171


>gi|50842973|ref|YP_056200.1| hypothetical protein PPA1495 [Propionibacterium acnes KPA171202]
 gi|289428787|ref|ZP_06430470.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|295131044|ref|YP_003581707.1| hypothetical protein HMPREF0675_4562 [Propionibacterium acnes
           SK137]
 gi|81611447|sp|Q6A7M3|RIMP_PROAC RecName: Full=Ribosome maturation factor rimP
 gi|50840575|gb|AAT83242.1| conserved protein [Propionibacterium acnes KPA171202]
 gi|289158185|gb|EFD06405.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|291375538|gb|ADD99392.1| conserved hypothetical protein [Propionibacterium acnes SK137]
 gi|313763590|gb|EFS34954.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
 gi|313773528|gb|EFS39494.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
 gi|313793984|gb|EFS42008.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
 gi|313801371|gb|EFS42622.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
 gi|313807950|gb|EFS46431.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
 gi|313811581|gb|EFS49295.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
 gi|313813359|gb|EFS51073.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
 gi|313816770|gb|EFS54484.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
 gi|313819519|gb|EFS57233.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
 gi|313822157|gb|EFS59871.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
 gi|313823609|gb|EFS61323.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
 gi|313825932|gb|EFS63646.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
 gi|313831321|gb|EFS69035.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
 gi|313834931|gb|EFS72645.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
 gi|313839908|gb|EFS77622.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
 gi|314914744|gb|EFS78575.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
 gi|314919294|gb|EFS83125.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
 gi|314920796|gb|EFS84627.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
 gi|314924648|gb|EFS88479.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
 gi|314930475|gb|EFS94306.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
 gi|314954367|gb|EFS98773.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
 gi|314957447|gb|EFT01550.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
 gi|314962085|gb|EFT06186.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
 gi|314963664|gb|EFT07764.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
 gi|314968508|gb|EFT12606.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
 gi|314974196|gb|EFT18292.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
 gi|314976695|gb|EFT20790.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
 gi|314978821|gb|EFT22915.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
 gi|314984333|gb|EFT28425.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
 gi|314986522|gb|EFT30614.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
 gi|314990881|gb|EFT34972.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
 gi|315079514|gb|EFT51507.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
 gi|315081256|gb|EFT53232.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
 gi|315083454|gb|EFT55430.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
 gi|315087140|gb|EFT59116.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
 gi|315089312|gb|EFT61288.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
 gi|315095335|gb|EFT67311.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
 gi|315099218|gb|EFT71194.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
 gi|315100431|gb|EFT72407.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
 gi|315106775|gb|EFT78751.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
 gi|327328402|gb|EGE70164.1| hypothetical protein HMPREF9338_01419 [Propionibacterium acnes
           HL096PA2]
 gi|327329732|gb|EGE71488.1| hypothetical protein HMPREF9337_01796 [Propionibacterium acnes
           HL096PA3]
 gi|327334249|gb|EGE75963.1| hypothetical protein HMPREF9344_01150 [Propionibacterium acnes
           HL097PA1]
 gi|327444189|gb|EGE90843.1| hypothetical protein HMPREF9571_02320 [Propionibacterium acnes
           HL043PA2]
 gi|327444932|gb|EGE91586.1| hypothetical protein HMPREF9570_01994 [Propionibacterium acnes
           HL043PA1]
 gi|327446417|gb|EGE93071.1| hypothetical protein HMPREF9568_00999 [Propionibacterium acnes
           HL013PA2]
 gi|327451994|gb|EGE98648.1| hypothetical protein HMPREF9584_02200 [Propionibacterium acnes
           HL092PA1]
 gi|327454969|gb|EGF01624.1| hypothetical protein HMPREF9581_01157 [Propionibacterium acnes
           HL087PA3]
 gi|327457745|gb|EGF04400.1| hypothetical protein HMPREF9586_00321 [Propionibacterium acnes
           HL083PA2]
 gi|328752172|gb|EGF65788.1| hypothetical protein HMPREF9563_02441 [Propionibacterium acnes
           HL020PA1]
 gi|328755196|gb|EGF68812.1| hypothetical protein HMPREF9579_01223 [Propionibacterium acnes
           HL087PA1]
 gi|328758324|gb|EGF71940.1| hypothetical protein HMPREF9588_00964 [Propionibacterium acnes
           HL025PA2]
 gi|328760060|gb|EGF73640.1| hypothetical protein HMPREF9343_02215 [Propionibacterium acnes
           HL099PA1]
 gi|332675924|gb|AEE72740.1| ribosome maturation factor RimP [Propionibacterium acnes 266]
          Length = 178

 Score = 89.3 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 70/175 (40%), Gaps = 11/175 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDD---GNMTLRDCEELSQAIS 77
           A  ++ +++PV+ ++     ++ ++   +  L+++ ++ D       +L +  E +  IS
Sbjct: 3   AERLTRLLEPVVSQVGLELDRVDVVPAGRRRLVRVTIDGDGPDGHGPSLDEISEATAEIS 62

Query: 78  PILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK--QKLIGK 134
             LD    +    Y LEVSS G+  P+ +   + R  GH+V   +  +   K  +   G+
Sbjct: 63  HCLDDSGAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGR 122

Query: 135 IMGTSETGFFLEKEKRGEKDMNE--LQIAISFDSLLSARLIVTDELLRASLNNYG 187
           I    E    LE E    K          +    +  A  +V  EL R       
Sbjct: 123 IAEAGEEVVTLEVEAENSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 175


>gi|254423906|ref|ZP_05037624.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196191395|gb|EDX86359.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 154

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 2/135 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERD-DGNMTLRDCEELSQAISP 78
           L   +  +  PV + +    V       +   +L++ V      +  L DCE LS A++ 
Sbjct: 5   LIPQVLELAAPVADRVGLEIVDAVFQTNQSPPVLRLDVRNPTQEDTGLNDCERLSIALTE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  N+I   Y LEVSSPG+   +    DF  + G  V   +      KQ   G ++G 
Sbjct: 65  ALDESNLIPDAYVLEVSSPGVSDVLSSDRDFKVFKGFPVEVRLSEPYKSKQIWRGSLIGR 124

Query: 139 SETGFFLEKEKRGEK 153
            +    L  + R  K
Sbjct: 125 DDDKLTLNLKGRPVK 139


>gi|295098917|emb|CBK88006.1| Uncharacterized protein conserved in bacteria [Eubacterium
           cylindroides T2-87]
          Length = 154

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 8/152 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   I+PV+ E       I  L  +   +LQI VE+ DG M L  C   S  I  +LD +
Sbjct: 6   LKEWIEPVLNEKDCVLYDIEWLTNQNPPILQISVEKQDGTMDLDTCAMCSDVIGTLLDNK 65

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +     Y LEV SPG +R +          G  V  +++       +++G +   ++   
Sbjct: 66  DWYTKEYMLEVCSPGAERELKTDQQLRDAIGKYVYVKLIDPKQGLDQVLGDLKEVNDDSI 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
            +      ++      I I  +++    +I+T
Sbjct: 126 IV----AYKEKTRNKTIEIDRNNI---NVIMT 150


>gi|322378931|ref|ZP_08053345.1| hypothetical protein HSUHS1_0574 [Helicobacter suis HS1]
 gi|322379785|ref|ZP_08054082.1| hypothetical protein HSUHS5_0146 [Helicobacter suis HS5]
 gi|321147753|gb|EFX42356.1| hypothetical protein HSUHS5_0146 [Helicobacter suis HS5]
 gi|321148607|gb|EFX43093.1| hypothetical protein HSUHS1_0574 [Helicobacter suis HS1]
          Length = 152

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 13/152 (8%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++++  ++ M      ++ L+E    +L+I ++  +G  +L  CEE S  ISP+LDV
Sbjct: 6   ELENLLETTLKGMGCALYDVAFLKENKRDILRISIKALEGPTSLDICEEASLLISPLLDV 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
               +  Y LEVSS G++R + +   F    G +V C+ + ++    +L G I   + + 
Sbjct: 66  HAPFKNAYTLEVSSMGLERSLSKLKHFKLSIGDLVECKTIENT----RLKGVIQAVNGSS 121

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L+  +  E         + F+++  A+ I 
Sbjct: 122 IVLQCAEGLEN--------LPFENIKKAKTIF 145


>gi|328955635|ref|YP_004372968.1| protein of unknown function DUF150 [Coriobacterium glomerans PW2]
 gi|328455959|gb|AEB07153.1| protein of unknown function DUF150 [Coriobacterium glomerans PW2]
          Length = 167

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 11/161 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGN-MTLRDCEELS 73
                L   +   ++          V + L    K   +++ +E+ DG+ ++L D    +
Sbjct: 1   MVKTKLEQRLIDALEAEASARDIDIVDVELTGATKAPCVRVRLEKADGSALSLDDVCAQN 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI--VLSSGDKQKL 131
             +S +++  + + G Y LEVSSPG+ RP+ R  DF R+ G               + +L
Sbjct: 61  CWVSAVVEDIDPVAGRYTLEVSSPGMARPLRRPRDFARFVGQTAQIGFIQTQGPDGRSRL 120

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G I   +E    +          +   +A+ F+++  A L
Sbjct: 121 TGLIQSANEDCVTI-------APKDGEPLAVPFEAIKKATL 154


>gi|269120927|ref|YP_003309104.1| hypothetical protein Sterm_2319 [Sebaldella termitidis ATCC 33386]
 gi|268614805|gb|ACZ09173.1| protein of unknown function DUF150 [Sebaldella termitidis ATCC
           33386]
          Length = 157

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 11/151 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I   I   ++EM+     +  + E     L+I++ER DG  ++ DC   S+ I P++  
Sbjct: 7   EIEKTIASYLDEMNLELADLEYVPEGGYNYLRIYIERVDGVTSIEDCVSFSEKIDPLI-- 64

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E+ I+  + LEVS+PGI+R + ++ DFLR+ G  +   +     DK+ L G ++      
Sbjct: 65  EDFIKDKFFLEVSTPGIERRLRKEKDFLRFKGKKIRLALKSKVNDKKVLTGDLVDFISNE 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             ++ E           I I  + +  A LI
Sbjct: 125 VVVDVEGTL--------INIPLEKVKKANLI 147


>gi|291279909|ref|YP_003496744.1| hypothetical protein DEFDS_1528 [Deferribacter desulfuricans SSM1]
 gi|290754611|dbj|BAI80988.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 158

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 11/156 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   + S ++  ++        I    EK   +L+IF+E D+  + L DC  +S+ +S 
Sbjct: 7   SIKEKVKSYLEENVKNEFLDIYDIQFRREKSGWVLRIFIEGDN--VGLSDCISVSKQVSK 64

Query: 79  ILDVENIIE-GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG-DKQKLIGKIM 136
            LD  +II   +Y LEVS+PG  R +    +F ++ G     ++V      ++   G I 
Sbjct: 65  WLDEVDIIPYENYNLEVSTPGATREIRNLDEFKKYIGKYCKIKLVEHDKYGRKNYKGYIK 124

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                   L  E+         +  I +  +  A L
Sbjct: 125 NVEGDIITLFVEE------ENKEFEIDYYLVKKANL 154


>gi|86609688|ref|YP_478450.1| hypothetical protein CYB_2246 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123501415|sp|Q2JJI0|RIMP_SYNJB RecName: Full=Ribosome maturation factor rimP
 gi|86558230|gb|ABD03187.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 156

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 3/148 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVE--RDDGNMTLRDCEELSQAIS 77
           L   + S+ +P+  ++ ++ VQ+     +   +L++ +     D   +  DCE +SQA+ 
Sbjct: 5   LIPQLESLARPLAAQLGYQLVQMVFHTNQHPPVLRVDIRPLDPDRETSHADCEAMSQALE 64

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I G Y LEVSSPGI   +    DF+ + G  V   +      K    G ++G
Sbjct: 65  VELDRVDLIPGQYVLEVSSPGISNLLTSDRDFVVFKGFAVEVTLDPPYKGKAVWSGHLLG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFD 165
             E    L  + R  +        ++  
Sbjct: 125 RDEERVALSLKGRRVQLPRASVQRVALS 152


>gi|154174423|ref|YP_001408783.1| hypothetical protein CCV52592_0357 [Campylobacter curvus 525.92]
 gi|259585735|sp|A7GZZ1|RIMP_CAMC5 RecName: Full=Ribosome maturation factor rimP
 gi|112802245|gb|EAT99589.1| protein conserved hypothetical protein [Campylobacter curvus
           525.92]
          Length = 138

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 15/147 (10%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +  +++E         +  E    + +I++ + +G ++L DCE++S+ +SPI DVE  I 
Sbjct: 4   LNELVKECGVELYDTEIANENGRAIYRIYITK-NGGVSLDDCEKVSRLLSPIFDVEPPIS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R +     F    G +V  +   +     K  G+++   +    LE 
Sbjct: 63  GDYNLEVSSPGLERKLSEARHFKASLGELVKAQTAEA-----KFAGRLVKADDESIALEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           +        E    I    +  A+  +
Sbjct: 118 D--------EGVFEIKIGDIKKAKTYL 136


>gi|166364177|ref|YP_001656450.1| YhbC family protein [Microcystis aeruginosa NIES-843]
 gi|226734161|sp|B0JU70|RIMP_MICAN RecName: Full=Ribosome maturation factor rimP
 gi|166086550|dbj|BAG01258.1| YhbC family protein [Microcystis aeruginosa NIES-843]
          Length = 156

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 1/147 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  D+  +  P+ E +    V I     ++  +L++ +    G+  L DCE++S+A+   
Sbjct: 5   LIPDLLHLAIPIAENLGLEVVDIVFQTNKRPPVLRVDIRNLAGDTGLEDCEQMSRALETA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD + I+ G Y LE+SSPGI R +  + +F  + G  V      S G  Q+  GK+ G  
Sbjct: 65  LDSQEILPGAYVLEISSPGISRQLSSEREFQSFKGFPVIVTGQDSQGKPQEWRGKLQGRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDS 166
           E   +L ++ R         I++  D 
Sbjct: 125 EQSIYLNQKGRSLTIDRTTVISVRLDE 151


>gi|294507806|ref|YP_003571864.1| hypothetical protein SRM_01991 [Salinibacter ruber M8]
 gi|294344134|emb|CBH24912.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 160

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 79/159 (49%), Gaps = 10/159 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               LA  +S + + VI    +  V + +   K   +++++++ ++  +   D   +S+ 
Sbjct: 9   TQQHLADRVSGLTEEVIVGTDYFLVDVEVRGHKGTRVVEVYIDSEEE-VGHDDLALISKE 67

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +  +LDVE++++G Y+LE+SSPGI RP+   + + +  G  +      S GD++ ++G +
Sbjct: 68  VGFLLDVEDVVDGSYKLELSSPGIKRPLTMPAQYRKNVGRTLRVR-FESDGDEEIVVGDL 126

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +    LE         +  ++ + + ++  AR+ +
Sbjct: 127 TDADDEEIELEL-------PSAERLQLPYTTITQARIEL 158


>gi|251783185|ref|YP_002997490.1| hypothetical protein SDEG_1793 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391817|dbj|BAH82276.1| hypothetical protein SDEG_1793 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 149

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 9/153 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV- 82
           ++  + P I+   +  V +   +   + +L I V++ +G +T+ D  +L+  ISP+LD  
Sbjct: 1   MTKTVAPEIKA-PYELVDVEYDKMGSDYVLSILVDK-EGGITVEDTSDLTDIISPLLDTI 58

Query: 83  -ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEVSSPG++RP+          G  V   +  +    +   G ++     
Sbjct: 59  TPDPFPDQYMLEVSSPGLERPLKTVESLKAAVGSYVNVSLYKAIDKVKVFQGDLLAFDGE 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++   +         + I + ++  ARL V
Sbjct: 119 TLTIDYLDK----TRHKTVDIPYQTVAKARLAV 147


>gi|315604482|ref|ZP_07879547.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313809|gb|EFU61861.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 156

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 15/150 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD--DGNMTLRDCEELSQAISPILD 81
           +  ++ P++E+       ++     +  LL++ V+     G +       +S+A+S  LD
Sbjct: 10  LEELLAPIVEQAGLELESVTRSRSDHTPLLRVIVDAPIGAGGVDSDALANVSRAVSRALD 69

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I+G Y LEVS+PG +R + +   +LR  G +V  ++         + G+++   E+
Sbjct: 70  DADPIDGEYLLEVSTPGAERELTKVDHWLRQVGRLVRVKLRAGGH----VSGRVVDADES 125

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           G  ++ +             I++  +  AR
Sbjct: 126 GATIDVDGNAT--------TIAYSDMRKAR 147


>gi|222110448|ref|YP_002552712.1| hypothetical protein Dtpsy_1245 [Acidovorax ebreus TPSY]
 gi|254800004|sp|B9MGN9|RIMP_DIAST RecName: Full=Ribosome maturation factor rimP
 gi|221729892|gb|ACM32712.1| protein of unknown function DUF150 [Acidovorax ebreus TPSY]
          Length = 197

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 38/184 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMTLRDCE 70
           +  +++  +  + +  V+I        LL+I ++                +  +T+ DCE
Sbjct: 3   LQQIVEQTVAGLGYDLVEIERSAGG--LLRITIDLVWVPPTDEVSAAVGVEQFITVEDCE 60

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---- 126
           ++++ +   L+VE +   + RLEVSSPGIDR +  ++DF R+ G V+   +    G    
Sbjct: 61  KVTRQLQFALEVEGV--DYTRLEVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAG 118

Query: 127 -----DKQKLIGKIMGTSETGFFLEKEKRGEKDMNE-----------LQIAISFDSLLSA 170
                +++K  G +      G+ +           +             +  + D L  A
Sbjct: 119 GQVHANRKKFRGTLERADSGGWQIVWSDEPPVKPGQRISKKRVPAPLQALGFTLDELREA 178

Query: 171 RLIV 174
           RL  
Sbjct: 179 RLAP 182


>gi|259586215|sp|Q2S1N5|RIMP_SALRD RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 79/159 (49%), Gaps = 10/159 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               LA  +S + + VI    +  V + +   K   +++++++ ++  +   D   +S+ 
Sbjct: 4   TQQHLADRVSGLTEEVIVGTDYFLVDVEVRGHKGTRVVEVYIDSEEE-VGHDDLALISKE 62

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           I  +LDVE++++G Y+LE+SSPGI RP+   + + +  G  +      S GD++ ++G +
Sbjct: 63  IGFLLDVEDVVDGSYKLELSSPGIKRPLTMPAQYRKNVGRTLRVR-FESDGDEEIVVGDL 121

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
               +    LE         +  ++ + + ++  AR+ +
Sbjct: 122 TDADDEEIELEL-------PSAERLQLPYTTITQARIEL 153


>gi|206602207|gb|EDZ38689.1| Conserved protein of unknown function [Leptospirillum sp. Group II
           '5-way CG']
          Length = 167

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 9/153 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M    ++  ++ P    +      + L  +   + ++FV+     + L   E +S+ IS 
Sbjct: 1   MRFEKELDHILTP----LGLSLHDLVLPGKNGGVFKVFVDHP-KGVGLDQLEAVSRRISD 55

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDV +   G YRLEVSSPG+DR +    D L   G  +  +       ++   G I   
Sbjct: 56  LLDVLDPFPGKYRLEVSSPGLDRVLRIPEDLLLHVGKHIKVKTKEPLQGQRVFRGTIGSL 115

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                 +       +   +L+ +I  D +   R
Sbjct: 116 EAGVLLIS----SVEGKKQLKHSIPLDLVAEVR 144


>gi|259585710|sp|A1W8Z6|RIMP_ACISJ RecName: Full=Ribosome maturation factor rimP
          Length = 197

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 38/184 (20%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMTLRDCE 70
           +  +++  +  + +  V+I        LL+I ++                +  +T+ DCE
Sbjct: 3   LQQIVEQTVAGLGYDLVEIERSAGG--LLRITIDLVWVPPTDEVSAAVGAEQFITVEDCE 60

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---- 126
           ++++ +   L+VE +   + RLEVSSPGIDR +  ++DF R+ G V+   +    G    
Sbjct: 61  KVTRQLQFALEVEGV--DYTRLEVSSPGIDRLLRNEADFKRFEGEVIDITLKQPMGAAAG 118

Query: 127 -----DKQKLIGKIMGTSETGFFLEKEKRGEKDMNE-----------LQIAISFDSLLSA 170
                +++K  G +      G+ +           +             +  + D L  A
Sbjct: 119 GQVHANRKKFRGALERADSGGWQIVWSDEPPVKPGQRISKKRVPAPLQALGFTLDELREA 178

Query: 171 RLIV 174
           RL  
Sbjct: 179 RLAP 182


>gi|160913531|ref|ZP_02076222.1| hypothetical protein EUBDOL_00007 [Eubacterium dolichum DSM 3991]
 gi|158434083|gb|EDP12372.1| hypothetical protein EUBDOL_00007 [Eubacterium dolichum DSM 3991]
          Length = 181

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSV--QISLLE-EKNLLLQIFVERDDGNMTLRDCEE 71
           IF    +      + Q V + +    V   ++  +  KN +LQI + R DG M +  C E
Sbjct: 21  IFKKENVMEHNEKIKQLVSDVLGDELVLYDVAWHQEGKNKILQIAIMRKDGTMDIDTCAE 80

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ IS  LD E+ I+  Y LEV SPG +R +          G  V  ++         +
Sbjct: 81  VSEKISAKLDEEDFIQSEYFLEVCSPGAERELKTYEQIKDAIGEFVYVKLKDPKAGMCDV 140

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G ++   E    ++   +  K   E    I   ++   RL
Sbjct: 141 KGTLLSCEENSILIQYMDKAVKKKAE----IEIANIALIRL 177


>gi|163857447|ref|YP_001631745.1| hypothetical protein Bpet3135 [Bordetella petrii DSM 12804]
 gi|226703725|sp|A9ITY3|RIMP_BORPD RecName: Full=Ribosome maturation factor rimP
 gi|163261175|emb|CAP43477.1| conserved hypothetical protein [Bordetella petrii]
          Length = 163

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 11/156 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ Q  +  M    V +        LL++ +++  G + + DCE++S+ +S + +V
Sbjct: 2   ADLYALTQQALAGMDVELVDVE--RAALGLLRVTIDKA-GGVRIEDCEQVSRQLSRVYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           ENI   + RLEV SPG+DRP+  +++  R+ G  +  ++      ++   G +   +  G
Sbjct: 59  ENI--DYKRLEVGSPGVDRPLRTEAELRRFAGERIEIKLRQPLDGRKVFSGILSAPANDG 116

Query: 143 FFLEKE------KRGEKDMNELQIAISFDSLLSARL 172
              + +      +   K  +   +  +   +  A+L
Sbjct: 117 AAADAQPAVFGLEFEAKKDDIQVLNFTLGDVERAKL 152


>gi|302522223|ref|ZP_07274565.1| conserved hypothetical protein [Streptomyces sp. SPB78]
 gi|318062644|ref|ZP_07981365.1| ribosome maturation protein RimP [Streptomyces sp. SA3_actG]
 gi|318081084|ref|ZP_07988416.1| ribosome maturation protein RimP [Streptomyces sp. SA3_actF]
 gi|302431118|gb|EFL02934.1| conserved hypothetical protein [Streptomyces sp. SPB78]
          Length = 183

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        ++++    +  +LQI V+  D  ++L  C ELS+ IS +LD
Sbjct: 7   ERLRELVEPLVTARDLDLEEVTVTPAGRRRVLQIVVDG-DSGVSLDTCAELSREISTVLD 65

Query: 82  VENIIEGHYR-LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +  +   LEV+SPG DRP+     ++R  G +V  ++         L+ +++   +
Sbjct: 66  DTDAMGENEYVLEVTSPGADRPLTAHRHYVRATGRLVRFQLAEGGE----LVARLLKADD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE      +     ++      +  AR+
Sbjct: 122 AGLDLEVPGVKGRKPTSRRLEFP--EISKARV 151


>gi|284992352|ref|YP_003410906.1| hypothetical protein Gobs_3968 [Geodermatophilus obscurus DSM
           43160]
 gi|284065597|gb|ADB76535.1| protein of unknown function DUF150 [Geodermatophilus obscurus DSM
           43160]
          Length = 196

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 8/160 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +A  ++ ++ PV+E   +   ++ +    +  ++++ V+R D  +TL D  E+S+A+S  
Sbjct: 10  VATRMAGLVAPVVEAAGYDLEELVVTPAGRRSIVRVVVDR-DAGVTLDDVAEVSRAVSTA 68

Query: 80  LDVEN--IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           LD  +       Y LEV+SPG+DRP+     + R  G +V   +    G  +++  +++ 
Sbjct: 69  LDEHDGEFGSAPYVLEVTSPGVDRPLTEPRHWRRNTGRLVTVAVGR-EGSSEQVTARVLE 127

Query: 138 TSETGFFLEKEKRGE---KDMNELQIAISFDSLLSARLIV 174
               G  L  E +G+   K     +  + +  L + R+ V
Sbjct: 128 VDGDGVTLAVEAKGKPGAKKRPPTRRQVPWQELGAGRVQV 167


>gi|121604914|ref|YP_982243.1| hypothetical protein Pnap_2013 [Polaromonas naphthalenivorans CJ2]
 gi|226701127|sp|A1VNU4|RIMP_POLNA RecName: Full=Ribosome maturation factor rimP
 gi|120593883|gb|ABM37322.1| protein of unknown function DUF150 [Polaromonas naphthalenivorans
           CJ2]
          Length = 202

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 39/185 (21%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD---------DGNMTLRDCEELSQA 75
           +   I+  +  + +  V+I        LL++ ++           +  +   DCE++++ 
Sbjct: 3   LQETIEQTVTGLGYELVEIERTSGG--LLRVTIDMPYLAGTAPGAEQFINAEDCEKVTRQ 60

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG--------- 126
           +  +L+VE     + RLEVSSPGIDRP+  + DF R+ G ++   +    G         
Sbjct: 61  LQFVLEVE--GAEYSRLEVSSPGIDRPLRSEKDFERFAGELIDITLKAPIGVAASAGSTV 118

Query: 127 --DKQKLIGKIMGTSETG------FFLEKEKRGEKDMNELQIAIS---------FDSLLS 169
              ++K  G +                  E   +      +  I           D +  
Sbjct: 119 SASRKKFRGTLERAEPVDGKPGWQIVWSDEPAVKPGQKISKKRIPAPLQALGFTLDEINQ 178

Query: 170 ARLIV 174
           ARL  
Sbjct: 179 ARLAP 183


>gi|319778228|ref|YP_004129141.1| transcription termination protein NusA [Taylorella equigenitalis
           MCE9]
 gi|317108252|gb|ADU90998.1| transcription termination protein NusA [Taylorella equigenitalis
           MCE9]
          Length = 171

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 20/165 (12%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            DI  + +  IE + +  V I    +  L + I ++R    +T+ DCEE+S+ +S I +V
Sbjct: 2   KDIFEISRGPIEGLGYELVDIERAAQGLLRVTIDIDR---GITIEDCEEVSRLLSRIYEV 58

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE-- 140
           E++   + RLEV SPG DRP+ ++ DF R+ G  V  +   +   K+   G +  T +  
Sbjct: 59  EDV--DYARLEVGSPGTDRPLKKEDDFHRFAGQRVEVKFHEAIASKKVFKGVLEVTQDIN 116

Query: 141 TGFFLEKE-------------KRGEKDMNELQIAISFDSLLSARL 172
             F L  +                 ++ +   I  ++  +  A+L
Sbjct: 117 NPFRLVLDPEIKNSKSKKTKNVESAQEQSNQIIEFNYSDVDRAKL 161


>gi|159036963|ref|YP_001536216.1| hypothetical protein Sare_1324 [Salinispora arenicola CNS-205]
 gi|259586188|sp|A8M743|RIMP_SALAI RecName: Full=Ribosome maturation factor rimP
 gi|157915798|gb|ABV97225.1| protein of unknown function DUF150 [Salinispora arenicola CNS-205]
          Length = 219

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 68/152 (44%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  V++PV++   +    +S+       +   +   DG + L    ++S+A+S  LD 
Sbjct: 40  ARLHQVVEPVVQGAGYDLEDLSVSRAGRRHVVQVIVDADGGVDLDAVADVSRAVSAALDA 99

Query: 83  E-----NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-KQKLIGKIM 136
                 +I+ G Y+LEVSSPG+ RP+     + R  G +V   +        +++ G+++
Sbjct: 100 AEEVGGDIVAGEYQLEVSSPGVARPLTLPRHWRRNTGRLVRFTVRGGPEAVDRQVTGRVV 159

Query: 137 GTSETGFFLEKE----KRGEKDMNELQIAISF 164
              +    +E +    +    ++   ++ + F
Sbjct: 160 EADDERVVVETDAGRTEWRHAELGPGRVQVEF 191


>gi|223038669|ref|ZP_03608962.1| conserved hypothetical protein [Campylobacter rectus RM3267]
 gi|222880071|gb|EEF15159.1| conserved hypothetical protein [Campylobacter rectus RM3267]
          Length = 142

 Score = 87.8 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 11/144 (7%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ +I +   +   + +  E    + +I++ +  G + L DCE++S+ +SPI DVE  + 
Sbjct: 4   LENLISQCGVQLYDVEVANENGRAIYRIYIAKP-GGVNLDDCEKVSRLLSPIFDVEPPLS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + + S F+   G +         G+ +KL GKI+   +    LE 
Sbjct: 63  GDYVLEVSSPGLERKLEKPSHFISSVGELAKIS-AEVDGENKKLKGKILSADDDETSLES 121

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
           E           + I   ++  A+
Sbjct: 122 EG--------QILKIKIANIKKAK 137


>gi|124515702|gb|EAY57211.1| conserved protein of unknown function [Leptospirillum rubarum]
          Length = 167

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 9/153 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M    ++  ++ P    +      + L  +   + ++FV+     + L   E +S+ IS 
Sbjct: 1   MRFEKELDHILTP----LGLSLHDLVLPGKNRGVFKVFVDHP-QGVGLDQLEAVSRRISD 55

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDV +   G YRLEVSSPG+DR +    D L   G  +  ++      ++   G I   
Sbjct: 56  LLDVLDPFPGKYRLEVSSPGLDRVLRIPEDLLLHVGKHIKVKMKEPFQGQRVFRGTIGSL 115

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                 +       +   +L+ +I  D +   R
Sbjct: 116 EAGVLLIS----SVEGKKQLKHSIPLDLVAEVR 144


>gi|239944686|ref|ZP_04696623.1| hypothetical protein SrosN15_27072 [Streptomyces roseosporus NRRL
           15998]
 gi|239991149|ref|ZP_04711813.1| hypothetical protein SrosN1_27849 [Streptomyces roseosporus NRRL
           11379]
 gi|291448147|ref|ZP_06587537.1| UPF0090 protein [Streptomyces roseosporus NRRL 15998]
 gi|291351094|gb|EFE77998.1| UPF0090 protein [Streptomyces roseosporus NRRL 15998]
          Length = 167

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 7/152 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I +    +  +L++ V+ D+  + L  C ELS+AIS  LD
Sbjct: 7   ERLRGLLEPLVSAQELDLEEIEVSRAGRRGVLRVIVDSDE-GVELDACAELSRAISQKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + EG Y LEVSSPG DRP+     ++R  G +    +        +L+ +I+   E
Sbjct: 66  ETDAMGEGEYVLEVSSPGADRPLTEHRHYVRATGRLARFHLTG--DGSGELVARILAVDE 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE    G K        ++FD +  AR+
Sbjct: 124 DGLDLEV--PGVKGRKPTARRLAFDEIAKARV 153


>gi|160902005|ref|YP_001567586.1| hypothetical protein Pmob_0529 [Petrotoga mobilis SJ95]
 gi|189040239|sp|A9BH33|RIMP_PETMO RecName: Full=Ribosome maturation factor rimP
 gi|160359649|gb|ABX31263.1| protein of unknown function DUF150 [Petrotoga mobilis SJ95]
          Length = 157

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 7/159 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +  +  +   I      V  ++      I +    KN +L++ +++ DG +++ DCE  S
Sbjct: 1   MLTNKEIKQLIWEKADNVASKLGLEIFDILIKGSNKNKILEVVIDKADGYVSIGDCERFS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A  P LD  ++ +  Y L VSSPG+DR +  K+D+ R+ G +    +         +IG
Sbjct: 61  KAFDPWLDEIDLFDKSYELVVSSPGLDRKLRGKADYERFKGKLAKFILKGKETKHPVVIG 120

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            I    E    + ++  G+         I  + +  A L
Sbjct: 121 YIDEILEDQIKITEKDSGKL------FNIDLNEIDKANL 153


>gi|313906215|ref|ZP_07839561.1| protein of unknown function DUF150 [Eubacterium cellulosolvens 6]
 gi|313468945|gb|EFR64301.1| protein of unknown function DUF150 [Eubacterium cellulosolvens 6]
          Length = 157

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 36  MSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
           M++  V +  ++E     L+ + ++ +G +T+ DCE +S+A    LD  ++IE  Y LEV
Sbjct: 23  MNYEFVDLEYVKEAGTWYLRAYADK-EGGITVDDCEIISRAFEEKLDAADLIEEAYILEV 81

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEK 153
           SSPG+ RP+ ++ D++R  G  V          +++  G +    +    +  ++  ++
Sbjct: 82  SSPGLGRPLKKERDYVRAMGQRVEIRTYKIINHEKEFTGVLQAYDDQSVTIVSDEDEQE 140


>gi|256544695|ref|ZP_05472067.1| hypothetical protein HMPREF0078_0324 [Anaerococcus vaginalis ATCC
           51170]
 gi|256399584|gb|EEU13189.1| hypothetical protein HMPREF0078_0324 [Anaerococcus vaginalis ATCC
           51170]
          Length = 152

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 8/149 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +   ++  I  + +  V I  +   KN +L+ F+ + DG +T+ DCE+ S  +S
Sbjct: 7   MDLISKLKENLESDINGLGYELVDIEFVNEGKNKILRFFIYK-DGGITIDDCEKTSNFLS 65

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSSP + RP+    D  R    ++  ++       +K IGKI  
Sbjct: 66  ERLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELLEIKLKNG----EKFIGKIKE 121

Query: 138 TSETGF--FLEKEKRGEKDMNELQIAISF 164
             E      LE E++  +      I I  
Sbjct: 122 IKENSLIFTLENEQKEIEKSEIKTIKIEI 150


>gi|271963646|ref|YP_003337842.1| hypothetical protein Sros_2114 [Streptosporangium roseum DSM 43021]
 gi|270506821|gb|ACZ85099.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 166

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++PV+         +++    K  LL++ V+R DG ++L D  E+S A+S  LD
Sbjct: 8   DRLIKLLEPVVGAEGLDLEDVTVTPAGKRRLLRVVVDR-DGGVSLDDVAEVSLAVSATLD 66

Query: 82  VENIIE-GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            ++ +    Y LEVSSPG+DRP+     + R    +V  ++   +     + G+I+ T E
Sbjct: 67  ADDAMGATPYVLEVSSPGVDRPLTEPRHWRRAVKRLVKADLRDGT----SVEGRIVATDE 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           TG  L+               I ++ L   R+ V
Sbjct: 123 TGVELDIAGAPR--------RIDYEDLTRGRVQV 148


>gi|255321999|ref|ZP_05363149.1| conserved hypothetical protein [Campylobacter showae RM3277]
 gi|255301103|gb|EET80370.1| conserved hypothetical protein [Campylobacter showae RM3277]
          Length = 142

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 11/144 (7%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ +I +   +   + +  E    + +I++ +  G + L DCE++S+ +SPI DVE  + 
Sbjct: 4   LENLISQCGVQLYDVEVANENGRAIYRIYIAKP-GGVNLDDCEKVSRILSPIFDVEPPLT 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + + S F+   G +         G+ +KL GKI+   +     E 
Sbjct: 63  GDYVLEVSSPGLERKLEKPSHFILSIGELAKIS-AEVDGENKKLKGKILSADDEEISFES 121

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
           E           + I   ++  A+
Sbjct: 122 EG--------QILKIKIANIKKAK 137


>gi|212704655|ref|ZP_03312783.1| hypothetical protein DESPIG_02718 [Desulfovibrio piger ATCC 29098]
 gi|212671889|gb|EEB32372.1| hypothetical protein DESPIG_02718 [Desulfovibrio piger ATCC 29098]
          Length = 244

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 67/193 (34%), Gaps = 38/193 (19%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD--------------- 60
             +  L   ++ +  P+++        + + +     +++FV+                 
Sbjct: 1   MSENSLKETVTRLATPLVQAQGLEIWGVEIAQAGRTTVRVFVDLPLEVKQAQAALSADSD 60

Query: 61  -------------DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKS 107
                          + ++  CEE+S+ +   L+VE++IE  Y LEVS+PG  R      
Sbjct: 61  PADNLEDSADIMAARSASIDQCEEISRQLGLALEVEDLIEQAYVLEVSTPGFSRLFFSLD 120

Query: 108 DFLRWNGHVVACEI------VLSSGDKQKLIGKIMGTSETGFFL----EKEKRGEKDMNE 157
               + G +V   +        +   ++   G +   +++   +       +        
Sbjct: 121 QMRSYVGDMVELRMVSAYAPENAPAARRAWRGVLREVTDSAVRVAPASVSAEGDICPEAM 180

Query: 158 LQIAISFDSLLSA 170
            ++ + +D +  A
Sbjct: 181 DEVLVPWDMVRRA 193


>gi|34558305|ref|NP_908120.1| hypothetical protein WS2018 [Wolinella succinogenes DSM 1740]
 gi|51316745|sp|Q7MQU0|RIMP_WOLSU RecName: Full=Ribosome maturation factor rimP
 gi|34484024|emb|CAE11020.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 142

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 17/146 (11%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
              I+ +++        + LL+E    +L++++ + +  ++L DC  +S  ISP+LDVE+
Sbjct: 7   QEKIEKLVQSCGCNLYDLLLLKENERSILRLYITK-EVGVSLDDCAMVSDLISPLLDVED 65

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            + G Y LEVSSPGI+RP+ R + +    G +   +       K ++ G+I    ET   
Sbjct: 66  PLAGEYFLEVSSPGIERPLKRPAHYQHALGELARIKFAD----KNEIEGEIEAADETSVK 121

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSA 170
           L+ E+            I +  +  A
Sbjct: 122 LKGEEP-----------IPYSLIKKA 136


>gi|302542144|ref|ZP_07294486.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302459762|gb|EFL22855.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 168

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        ++ +    K  +L+I V+ DD  + L  C ELS+AIS  LD
Sbjct: 7   ERLRGLLEPLVSARDLDLEEVEVTPAGKRRVLRIVVDSDD-GVQLDTCAELSRAISQALD 65

Query: 82  VENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +    Y LEV+SPG +RP++ +  + R  G ++  ++V        LI +I+   +
Sbjct: 66  ESDAMGQTPYVLEVTSPGAERPLIEQRHYRRATGRLMKAQLVEGGE----LIARIIAVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE    G K        ++F  +  AR+
Sbjct: 122 EGLDLEV--PGVKGRKPTTRRLAFKEISKARV 151


>gi|255994862|ref|ZP_05427997.1| conserved hypothetical protein [Eubacterium saphenum ATCC 49989]
 gi|255993575|gb|EEU03664.1| conserved hypothetical protein [Eubacterium saphenum ATCC 49989]
          Length = 187

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 75/192 (39%), Gaps = 43/192 (22%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER---------------- 59
               +   +    +  + E+S     +      K+ +L+++++R                
Sbjct: 1   MKKEIENAVEEACKAKLAELSLEIYSVEYKREGKDWILRVYIDRMFCEDAVGIGYDKQAG 60

Query: 60  ------------------DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDR 101
                              +  + + +C  +S+AIS  LD  +II+ +Y LEVS+PGIDR
Sbjct: 61  MNTDARCQKAQGIKADSKREKPIGIDECTAISEAISEYLDKNDIIDNNYYLEVSTPGIDR 120

Query: 102 PMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIA 161
            + +  DF+R+ G  V   +      +++  G ++  ++ G  +E ++  +   N     
Sbjct: 121 ELKKDIDFIRFKGRSVDISLYKRIDGQKEYRGTLIEKNDEGIAVEVDESTKVFSN----- 175

Query: 162 ISFDSLLSARLI 173
              + +    L 
Sbjct: 176 ---NDVAKVNLA 184


>gi|328885405|emb|CCA58644.1| conserved hypothetical protein [Streptomyces venezuelae ATCC 10712]
          Length = 168

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 6/152 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++   +    +I +    +  LL+I V+ D+  + L  C ELS+AIS  LD
Sbjct: 7   DRLRGLVEPLVAAKNLDLEEIEVSRAGRRGLLRIVVDSDE-GVELDACAELSRAISEKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + EG Y LEVSSPG DRP+ +   ++R  G +V  ++    G  ++L+ +I+   E
Sbjct: 66  ETDAMGEGEYVLEVSSPGADRPLTQHRHYVRATGRLVKLQLSS-DGAAEELVARIVAVDE 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE      +     ++   F  +  AR+
Sbjct: 125 DGLDLEVPGVKGRKPTARRVE--FADVAKARV 154


>gi|313836821|gb|EFS74535.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
 gi|314929770|gb|EFS93601.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
 gi|314972199|gb|EFT16296.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
 gi|328907627|gb|EGG27391.1| hypothetical protein PA08_0657 [Propionibacterium sp. P08]
          Length = 178

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 68/177 (38%), Gaps = 15/177 (8%)

Query: 22  AGDISSVIQPVIEEMSFRS--VQISLLEEKNLLLQIFVERDD---GNMTLRDCEELSQAI 76
           A  ++S+++P +  +      V + +   +  L+++ V+ D       +L +  E +  I
Sbjct: 3   AERLTSLLEPAVSRLGLELDCVDV-VPAGRRRLVRVTVDGDGPDGHGPSLDEISEATAEI 61

Query: 77  SPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK---LI 132
           S  LD  + +    Y LEVSS G+  P+ +   + R  GH+V   +   S  +       
Sbjct: 62  SRCLDDSDAMGESPYTLEVSSRGVSTPLTQPRHYRRNIGHLVRFTL-NPSEGQTSGEAFD 120

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNE--LQIAISFDSLLSARLIVTDELLRASLNNYG 187
           G+I    E    LE E    K          +    +  A  +V  EL R       
Sbjct: 121 GRITEAGEEVVTLEVEAGNSKPHKPVYTTREVQLADVAKA--VVQVELNRRDAQASK 175


>gi|256396851|ref|YP_003118415.1| hypothetical protein Caci_7750 [Catenulispora acidiphila DSM 44928]
 gi|256363077|gb|ACU76574.1| protein of unknown function DUF150 [Catenulispora acidiphila DSM
           44928]
          Length = 203

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 66/157 (42%), Gaps = 10/157 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G A  + ++++PV+    +    + + +         V   D  ++L    ++++ +S +
Sbjct: 8   GPADRLQALLEPVVAAAGYDLESVRVSQVARRRRVEVVVDGDDGVSLDAVSDITRVVSDV 67

Query: 80  LDVEN----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           LD       + E  Y LEV SPG DRP+     + R  G +V   +         + G++
Sbjct: 68  LDAPEGVAVMGEQPYVLEVGSPGTDRPLTLPKHWRRAKGRLVRALLRNGGD----VTGRV 123

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           + + + G  LE   + +    E    + +  +  AR+
Sbjct: 124 LDSDDEGVLLEVPGKKKGQTEER--RLEYSEVAKARV 158


>gi|218960601|ref|YP_001740376.1| hypothetical protein CLOAM0262 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729258|emb|CAO80169.1| conserved hypothetical protein [Candidatus Cloacamonas
           acidaminovorans]
          Length = 156

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  + + + +EM      I   +  K  ++ +++ +  G +TL +C   S A+   L+
Sbjct: 6   AQVEEIARKICQEMHLAVYDIEEKMSGKGRIITVYLTKI-GGVTLDECAAFSNALGKELE 64

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           + ++I   Y LEVSSPG++RP+  KS ++      VA +      +++ ++G +   ++ 
Sbjct: 65  IFDLIPERYFLEVSSPGLERPLKLKSHYVSAINEKVAVQFQAG-EERKSIMGTLTEVNQD 123

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ++               I F S++ A+ + 
Sbjct: 124 TIVIDDRGSVT--------EIPFKSIIRAKTVF 148


>gi|182435607|ref|YP_001823326.1| hypothetical protein SGR_1814 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776241|ref|ZP_08235506.1| Ribosome maturation factor rimP [Streptomyces cf. griseus
           XylebKG-1]
 gi|226695980|sp|B1VYN8|RIMP_STRGG RecName: Full=Ribosome maturation factor rimP
 gi|178464123|dbj|BAG18643.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326656574|gb|EGE41420.1| Ribosome maturation factor rimP [Streptomyces cf. griseus
           XylebKG-1]
          Length = 167

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 7/152 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I +    +  +L+I V+ ++  + L  C ELS+AIS  LD
Sbjct: 7   ERLRGLLEPLVSAQQLDLEEIEVSRAGRRGVLRIIVDSEE-GVELDACAELSRAISEKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + EG Y LEVSSPG DRP+     ++R  G +    +  +     +L+ +I+   E
Sbjct: 66  ETDAMGEGEYVLEVSSPGADRPLTEHRHYVRATGRLARFHL--AGDGSGELVARILAVDE 123

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE    G K        ++FD +  AR+
Sbjct: 124 EGLDLEV--PGVKGRKPTARRLAFDEIARARV 153


>gi|108804246|ref|YP_644183.1| hypothetical protein Rxyl_1409 [Rubrobacter xylanophilus DSM 9941]
 gi|122381798|sp|Q1AW57|RIMP_RUBXD RecName: Full=Ribosome maturation factor rimP
 gi|108765489|gb|ABG04371.1| protein of unknown function DUF150 [Rubrobacter xylanophilus DSM
           9941]
          Length = 152

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 12/150 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +S  ++  + E     V+         LL + V+R+ G +    C  +   ++P L+ 
Sbjct: 9   DRLSEAVERALPE-GTELVEARFSRG--PLLTLLVDREGGPVDHEFCARIISIVAPALEE 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E        +EVSSPGI+RP+ R S F R+ G  V   +      ++   G I   ++ G
Sbjct: 66  E---GYSGMIEVSSPGIERPLTRPSHFRRFIGRRVRVRVGEPVDGRRNFTGVIERVADAG 122

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           F L   + GE      ++ + F S+  A L
Sbjct: 123 FVLRLSEDGE------EVELPFGSVTRAHL 146


>gi|86605174|ref|YP_473937.1| hypothetical protein CYA_0456 [Synechococcus sp. JA-3-3Ab]
 gi|123507667|sp|Q2JX22|RIMP_SYNJA RecName: Full=Ribosome maturation factor rimP
 gi|86553716|gb|ABC98674.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 157

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 13/157 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVE--RDDGNMTLRDCEELSQAIS 77
           L   + S+ +P+   + +  VQ+     +   +L++ +     +   +  DCE +SQA+ 
Sbjct: 5   LIPQLESLARPLAARLGYELVQMVFHTNQYPPVLRVDIRPLDPEQETSHADCEAMSQALE 64

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I GHY LEVSSPGI   ++   DF+ + G  V   +      K    G ++G
Sbjct: 65  VELDRVDLIPGHYVLEVSSPGISNLLISDRDFVVFKGFAVEVTVDPPYKGKAVWSGHLLG 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             E    L  + R        ++ +   S+   R+++
Sbjct: 125 RDEEKVALSLKGR--------RVQLPRASVQ--RVVL 151


>gi|56807386|ref|ZP_00365365.1| COG0779: Uncharacterized protein conserved in bacteria
           [Streptococcus pyogenes M49 591]
          Length = 162

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V++ +G +T+ D  +L+ 
Sbjct: 5   IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDK-EGGITVEDTSDLTN 62

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 63  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 122

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +         + I + ++   R+ V
Sbjct: 123 GDLLAFDGETLTIDYLDK----TRHKIVNIPYQAVAKVRMAV 160


>gi|282861438|ref|ZP_06270503.1| protein of unknown function DUF150 [Streptomyces sp. ACTE]
 gi|282564096|gb|EFB69633.1| protein of unknown function DUF150 [Streptomyces sp. ACTE]
          Length = 165

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 7/151 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  +++P++        +I +       +   +   D  + L  C ELS+ IS  LD 
Sbjct: 7   DRLRGLLEPLVSAKELDLEEIEVSRAGRRRVLRVIVDSDDGVELDTCAELSRTISETLDA 66

Query: 83  ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + + EG Y LEVSSPG DRP+     ++R  G +    +         L+ +I+G  + 
Sbjct: 67  TDAMGEGEYVLEVSSPGADRPLTEHRHYVRATGRLAKLNLADGGE----LVARILGVDDE 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G  LE      +     ++  +FD +  AR+
Sbjct: 123 GLDLEVPGVKGRKPTARRV--AFDEIAKARV 151


>gi|269127539|ref|YP_003300909.1| hypothetical protein Tcur_3333 [Thermomonospora curvata DSM 43183]
 gi|268312497|gb|ACY98871.1| protein of unknown function DUF150 [Thermomonospora curvata DSM
           43183]
          Length = 205

 Score = 85.8 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 9/149 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  +++ ++ P+         ++ +       L   V   DG +TL D   LSQA+S  L
Sbjct: 35  VQAELTRLVGPLAAAQGLDLEELDVKPAGRRRLVRIVVDADGGVTLEDTATLSQAVSAAL 94

Query: 81  DVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  +++    Y LEV+SPG+DRP+     + R  G +V   +         + G+++   
Sbjct: 95  DDTDVMGEAPYVLEVTSPGVDRPLTEPRHWRRATGRLVRAALADGGQ----VEGRVVAAD 150

Query: 140 ETGFFLEKEKR----GEKDMNELQIAISF 164
           E    LE   R    G  ++   ++ + F
Sbjct: 151 EEAVVLEVAGRRRRFGHGELGRGRVQVEF 179


>gi|261416679|ref|YP_003250362.1| protein of unknown function DUF150 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373135|gb|ACX75880.1| protein of unknown function DUF150 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326580|gb|ADL25781.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 150

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++S+I    +  S   V+       K   L+IF+++ +  +T+ DC  +S  +S  L
Sbjct: 4   QEKLNSLIADACKSASVTLVEADVFRAGKRKTLRIFIDKPE-GVTIDDCTNVSHFLSDAL 62

Query: 81  DVE-NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D++  +IEG Y LEVSSPGIDRP+   +DF R  G ++           + + G+++   
Sbjct: 63  DLDPELIEGAYTLEVSSPGIDRPLKSMADFERNKGRLLRVTRSTG----KPVTGELLNAD 118

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    L+ +          +I I    +LSA++ V
Sbjct: 119 EENLTLKLKGNA------GEIVIPRSEVLSAKVEV 147


>gi|317402908|gb|EFV83449.1| hypothetical protein HMPREF0005_01713 [Achromobacter xylosoxidans
           C54]
          Length = 175

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 73/160 (45%), Gaps = 15/160 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R  G + + DCE++S+ +S + +V
Sbjct: 10  ADLFALTEEALAGMDVELVDVERAALG--LLRVTIDRV-GGVRIEDCEQVSRQLSRVYEV 66

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           ENI   + RLEV SPGIDRP+  +++F R+ G  +  ++  +   ++   G +    +  
Sbjct: 67  ENI--DYKRLEVGSPGIDRPLRNEAEFRRFAGERIEIKLREALDGRKVFSGTLTVPEDAP 124

Query: 143 F----------FLEKEKRGEKDMNELQIAISFDSLLSARL 172
                       +   +   K      +  + D +  A+L
Sbjct: 125 AASDAVAGMHKTVFGLEFEAKKNEIQVLNFTVDDIERAKL 164


>gi|319762632|ref|YP_004126569.1| hypothetical protein Alide_1938 [Alicycliphilus denitrificans BC]
 gi|330824722|ref|YP_004388025.1| ribosome maturation factor rimP [Alicycliphilus denitrificans K601]
 gi|317117193|gb|ADU99681.1| protein of unknown function DUF150 [Alicycliphilus denitrificans
           BC]
 gi|329310094|gb|AEB84509.1| Ribosome maturation factor rimP [Alicycliphilus denitrificans K601]
          Length = 196

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 75/200 (37%), Gaps = 42/200 (21%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE-------------RDDGNMTLRDCEE 71
           +  +++  +  + +  V+I        LL+I ++                  +T+ DCE+
Sbjct: 3   LQQIVEQTVAGLGYDLVEIERSAGG--LLRITIDLMWAPPADGGEVQATGQFVTVEDCEK 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS------ 125
           +++ +   L+VE +   + RLEVSSPGIDR +  + DF R+ G V+   +          
Sbjct: 61  VTRQLQFALEVEGV--DYKRLEVSSPGIDRLLRNEQDFTRFEGEVIDITLKEPLGAAAGG 118

Query: 126 ---GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ-----------IAISFDSLLSAR 171
               +++K  G +      G+ +           +             +  + D L  AR
Sbjct: 119 QVAANRKKFRGTLERVPAGGWQIVWSDEPPVKPGQRVSKKRVPAPLQALGFTLDELREAR 178

Query: 172 LIVTDELLRASLNNYGSYAG 191
           L    +         G+  G
Sbjct: 179 LAPIVD-----FKGRGARPG 193


>gi|57505608|ref|ZP_00371535.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
 gi|57016155|gb|EAL52942.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
          Length = 138

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 14/144 (9%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + EE         L+ E    + +I++ + +G ++L DC  LS+ +SPI DVE  + 
Sbjct: 3   LKALCEEAGVELYDSELVSENGKKIYRIYIMK-EGGVSLEDCARLSEILSPIFDVEPPVN 61

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSS G++R +     F +  G ++          K+K+ GK++       FL+ 
Sbjct: 62  GEYFLEVSSAGLERKLSTLEHFEKSVGEMLKITTSE----KEKIQGKLLKVEGENIFLQD 117

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
           EK         +I I F  +  A+
Sbjct: 118 EK--------AEICIEFSQVKKAK 133


>gi|220903348|ref|YP_002478660.1| hypothetical protein Ddes_0062 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254799886|sp|B8J1Y7|RIMP_DESDA RecName: Full=Ribosome maturation factor rimP
 gi|219867647|gb|ACL47982.1| protein of unknown function DUF150 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 258

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 52/207 (25%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD--------------- 60
             D  L   I  + QPV+  +      +        ++++FV+                 
Sbjct: 1   MTDNALRETIIRLAQPVVHTLGLVIWGVETARAGRTIVRLFVDVPTIPQRPGMPEGSEEP 60

Query: 61  ------------------------DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSS 96
                                     + T+  CEE+S+ ++  L+VE+ I   Y LEVS+
Sbjct: 61  SSAITAPAPAHDPQESSGAEAPAAPTSATIEQCEEISRHLALALEVEDSIADAYVLEVST 120

Query: 97  PGIDRPMVRKSDFLRWNGHVVACEIVLSS---------GDKQKLIGKIMGTSETGFFL-- 145
           PG+ R        + + G VV   +             G ++   G ++   +  F L  
Sbjct: 121 PGLSRLFFSLEQMIPYVGDVVEARLHTPVASTDPAAHGGPRRVWRGTLVAVEDDAFVLAP 180

Query: 146 --EKEKRGEKDMNELQIAISFDSLLSA 170
                +   +D N+  + + ++++  A
Sbjct: 181 VTVSPEGEVEDENQPPVRLPWEAVRRA 207


>gi|307067173|ref|YP_003876139.1| hypothetical protein SPAP_0544 [Streptococcus pneumoniae AP200]
 gi|306408710|gb|ADM84137.1| Uncharacterized protein conserved in bacteria [Streptococcus
           pneumoniae AP200]
          Length = 134

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 8/136 (5%)

Query: 42  QISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPG 98
            I   +   +++L IFV++ +  +TL D  +L++ ISP+LD    +     Y LE++SPG
Sbjct: 2   DIEYGKIGSDMILSIFVDKPE-GITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPG 60

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNEL 158
           ++RP+  K       G  +   +  +   ++   G ++   E    +E   +  K     
Sbjct: 61  LERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKK---- 116

Query: 159 QIAISFDSLLSARLIV 174
            + I +  +  ARL V
Sbjct: 117 TVQIPYSLVSKARLAV 132


>gi|295836232|ref|ZP_06823165.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|295825917|gb|EFG64551.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 183

 Score = 85.4 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I++    +  +LQI V+  D  ++L  C ELS+ IS +LD
Sbjct: 7   ERLREILEPLVTARDLDLEEITVTPAGRRRVLQIVVDG-DTGVSLDTCAELSREISTVLD 65

Query: 82  VENIIEGHYR-LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +  +   LEV+SPG DRP+     ++R  G +V  ++         L+ +++   +
Sbjct: 66  DTDAMGENEYVLEVTSPGADRPLSAHRHYVRATGRLVRFQLAEGGE----LVARLLKADD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE      +     ++      +  AR+
Sbjct: 122 AGLDLEVPGVKGRKPTSRRLEFP--EISKARV 151


>gi|152990172|ref|YP_001355894.1| hypothetical protein NIS_0423 [Nitratiruptor sp. SB155-2]
 gi|167012920|sp|A6Q228|RIMP_NITSB RecName: Full=Ribosome maturation factor rimP
 gi|151422033|dbj|BAF69537.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 142

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 18/157 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAIS 77
           M L  +I  +    +E    +   I  + ++   + ++ +   +  + L+ C E+S  IS
Sbjct: 1   MSLEQEIKQI----VESCGAKLYDIETVSDRGKTIYRVTITAPE-GVDLQKCVEISNLIS 55

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDV   + G Y LEVSSPG++R + + S F    G  V         D + + G +  
Sbjct: 56  PLLDVHPPVSGDYNLEVSSPGVERKLKKPSHFEHSVGEKVRVT----KNDGETIEGVLSD 111

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +    L+             I I  D +  A+ I 
Sbjct: 112 FRDHTLTLQ--------TKNGPIEIPLDQITYAKTIF 140


>gi|119963357|ref|YP_947325.1| uncharacterized Bcr YhbC family protein [Arthrobacter aurescens
           TC1]
 gi|259585697|sp|A1R513|RIMP_ARTAT RecName: Full=Ribosome maturation factor rimP
 gi|119950216|gb|ABM09127.1| putative Uncharacterized BCR YhbC family protein [Arthrobacter
           aurescens TC1]
          Length = 203

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 12/159 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDG---NMTLRDCEELSQAIS 77
              + ++++P +         +S+ +   +  + + V+        ++L    ++S+ +S
Sbjct: 26  ESRLKALLEPAVLASRLYLEDVSIHVAGSHRTVHVVVDLPQEETGGVSLDAIADVSRGLS 85

Query: 78  PILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            ILD +   +G  Y LEVSSPG+ RP+     + R  G +V   ++        L+G+I 
Sbjct: 86  DILDNDPHDDGRPYDLEVSSPGVSRPLTEPRHWHRARGRMVRVNVIQGDN----LLGRIA 141

Query: 137 GTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
              +    L  E   K+G K      I I FD +   ++
Sbjct: 142 SVGDDAVTLIPEHEVKKGMKPKQGEPITIPFDRIRQGKV 180


>gi|268316866|ref|YP_003290585.1| hypothetical protein Rmar_1307 [Rhodothermus marinus DSM 4252]
 gi|262334400|gb|ACY48197.1| protein of unknown function DUF150 [Rhodothermus marinus DSM 4252]
          Length = 160

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 78/158 (49%), Gaps = 10/158 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAIS 77
             L   I + ++ V++  +F  + + +   +   +++IF++  D   +LRD E+LS+ I 
Sbjct: 9   PALIEQIRARVEEVLQGTTFFLIDVVVRGRRGAHVVEIFIDG-DRGPSLRDLEQLSREIG 67

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK-QKLIGKIM 136
            +LD ++++ G Y L VSSPG+DRP+V    + +  G  +  ++V  +    ++L G + 
Sbjct: 68  FLLDSDDLLPGPYTLNVSSPGVDRPLVHPRQYPKHVGRELEVKLVAVADAPAERLRGTLQ 127

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
                   L      ++        + ++ + SAR+ +
Sbjct: 128 RADAEAIELRLPDGSQR-------RLRYEEIQSARVCL 158


>gi|293604236|ref|ZP_06686644.1| protein of hypothetical function DUF150 [Achromobacter piechaudii
           ATCC 43553]
 gi|292817461|gb|EFF76534.1| protein of hypothetical function DUF150 [Achromobacter piechaudii
           ATCC 43553]
          Length = 174

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 14/159 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R  G + + DCE++S+ +S + +V
Sbjct: 10  ADLFALTEEALAGMDVELVDVERAALG--LLRVTIDRV-GGVRIEDCEQVSRQLSRVFEV 66

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           EN+   + RLEV SPGIDRP+  +++F R+ G  +  ++  +   ++   G +    +  
Sbjct: 67  ENV--DYKRLEVGSPGIDRPLRNEAEFRRFAGERIEIKLREALDGRKVFSGTLTVPEDAA 124

Query: 143 FFLEKEK---------RGEKDMNELQIAISFDSLLSARL 172
                              K      +  + + +  A+L
Sbjct: 125 ASDADAGMHRTVFGLEFEAKKNEIQVLNFTVEDIERAKL 163


>gi|116490509|ref|YP_810053.1| hypothetical protein OEOE_0429 [Oenococcus oeni PSU-1]
 gi|118587524|ref|ZP_01544948.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163]
 gi|290889909|ref|ZP_06552996.1| hypothetical protein AWRIB429_0386 [Oenococcus oeni AWRIB429]
 gi|122277304|sp|Q04GN4|RIMP_OENOB RecName: Full=Ribosome maturation factor rimP
 gi|116091234|gb|ABJ56388.1| hypothetical protein OEOE_0429 [Oenococcus oeni PSU-1]
 gi|118431975|gb|EAV38717.1| conserved hypothetical protein [Oenococcus oeni ATCC BAA-1163]
 gi|290480519|gb|EFD89156.1| hypothetical protein AWRIB429_0386 [Oenococcus oeni AWRIB429]
          Length = 156

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 10/153 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN-MTLRDCEELSQAISPILD 81
             I   IQP++ E       +S       +L I ++  D   + +    E++  IS  LD
Sbjct: 7   DTIKEKIQPILSEKHLLLWDLSFFGGSPAVLTILIDGQDHQAIRMNQISEVTSLISDALD 66

Query: 82  --VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
               +     Y L++SSPGIDR +          G  +   +       +   G +   S
Sbjct: 67  KVEPDPFPDRYNLDISSPGIDRSIKTDEHLDWALGQPIKLNLFEKIDGSKSAEGILKSFS 126

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    LE      K+          + +    L
Sbjct: 127 DLEISLEVSPAEVKN-------FPREKISKISL 152


>gi|303233384|ref|ZP_07320053.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
 gi|302480513|gb|EFL43604.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
          Length = 157

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 66/159 (41%), Gaps = 12/159 (7%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD---GNMTLRDCEE 71
                L   + S ++          V + +       ++++ ++  D     ++L +  +
Sbjct: 1   MTPEALRTALLSALEQAAPAHGIDIVDVEIAGSSRAPIIRLRIDNADESLPTISLDEVAQ 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
             + I+  LD  + IEG Y LEVSSPG+ RP+ +  DF R+    V  +    +  +++ 
Sbjct: 61  QHEWINATLDEMDPIEGSYTLEVSSPGLARPLRKHHDFERFAHETVQLQTNN-TEGRKRF 119

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            G++ G       ++        ++   +    ++++S 
Sbjct: 120 SGELCG-------IDDNDVVTVVVDGEDMQFPRNTIVSC 151


>gi|319957625|ref|YP_004168888.1| hypothetical protein Nitsa_1895 [Nitratifractor salsuginis DSM
           16511]
 gi|319420029|gb|ADV47139.1| protein of unknown function DUF150 [Nitratifractor salsuginis DSM
           16511]
          Length = 146

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 18/158 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAIS 77
           M L   I+ +++               + E +  + ++++ + DG + L  C ++S  +S
Sbjct: 1   MNLEDQIAKIVR----SHGAEFYDTETVNENDQTIYRVYITK-DGGVDLDTCADISNDLS 55

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDV   + G Y LEVSSPGI+R + +   F    G  V  +        +KL G +  
Sbjct: 56  PLLDVHPPVGGKYFLEVSSPGIERTLKKPRHFQSAVGERVKLK----IAGGEKLRGILES 111

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             E G  L           E +   S+  +L AR    
Sbjct: 112 ADEEGIILR--------NKEGEHRYSYPQILKARTYFD 141


>gi|297571192|ref|YP_003696966.1| hypothetical protein Arch_0611 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931539|gb|ADH92347.1| protein of unknown function DUF150 [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 156

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 19/168 (11%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG--NMTLRDCEELS 73
               ++  I+ ++ PV++E       + ++   K+ ++++ V+   G   +      ++S
Sbjct: 1   MVDNVSAQIAQLLDPVVQESGLWLETVRVVGAGKHTVVRVTVDLPSGPGGVDSTQLMDVS 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           +A+S +LD ++ I+G Y LEVS+PG  R +  +  F R  G  VA ++   +    K   
Sbjct: 61  RAVSVVLDEKDPIKGAYTLEVSTPGATRELSEERHFSRAIGRKVAFQLSDDT----KFTE 116

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRA 181
           +I+  ++    L                I+   +  A +++  EL +A
Sbjct: 117 RIVDVADGVITL----------AGQPGTIAVVDVARAHVVL--ELNKA 152


>gi|319793510|ref|YP_004155150.1| hypothetical protein Varpa_2847 [Variovorax paradoxus EPS]
 gi|315595973|gb|ADU37039.1| protein of unknown function DUF150 [Variovorax paradoxus EPS]
          Length = 215

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 73/191 (38%), Gaps = 45/191 (23%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD--------------DGNMTLRDCE 70
           +  +++  +  + +  V+I        LL++ ++                +  +T+ DCE
Sbjct: 3   LQQIVEQTVAGLGYDLVEIERSAGG--LLRVTIDLPWTAPTSEAVAAGVPEPFVTVEDCE 60

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---- 126
           ++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G V+   +    G    
Sbjct: 61  KVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRNEQDFERFVGSVIDLTLKAPMGAAAA 118

Query: 127 -----DKQKLIGKIMGTSETG-------FFLEKEKRGEKDMNELQ-----------IAIS 163
                 ++K  G +    +         + +      +    +             +   
Sbjct: 119 GQVSATRKKFRGTLERAEKAEGADAAPGWQIVWSDAPKPKPGQKVSKKRAPAPLHALGFV 178

Query: 164 FDSLLSARLIV 174
            D L  ARL  
Sbjct: 179 LDELRDARLAP 189


>gi|223984471|ref|ZP_03634604.1| hypothetical protein HOLDEFILI_01898 [Holdemania filiformis DSM
           12042]
 gi|223963542|gb|EEF67921.1| hypothetical protein HOLDEFILI_01898 [Holdemania filiformis DSM
           12042]
          Length = 156

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 6/154 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +I ++I PV++ +  +   +  + EK + +LQI V R DG+M +  C  +S+ IS  LD
Sbjct: 5   ENIKTLILPVLDSLGIQLYDLKWVNEKKSRILQIAVMRADGSMDIDTCALVSEKISEALD 64

Query: 82  -VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             ++ I   Y LEV SPG +R +    +     G  V   +        ++ G ++  +E
Sbjct: 65  AHDDWISFEYFLEVCSPGAERELRNAGEIRGALGKHVCVRLKSPVKSMMEITGDLLEMNE 124

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           T   L    +      +++     D +   RL V
Sbjct: 125 TTLTLSYRDKAVTRKAQVE----LDQIEKIRLAV 154


>gi|22299481|ref|NP_682728.1| hypothetical protein tll1938 [Thermosynechococcus elongatus BP-1]
 gi|22295664|dbj|BAC09490.1| tll1938 [Thermosynechococcus elongatus BP-1]
          Length = 168

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 9/149 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++ Q V ++     V +  L  +   +L++ V   + + +L DCE LS+A+   LD  
Sbjct: 21  VQTLAQQVADQEHLDLVSVQWLTHQSPPILRVEVRHPENDTSLEDCERLSRALEMALDEL 80

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
              E  Y LEVSSPG+   +    DF  + G  V          K    G ++   E   
Sbjct: 81  PEFEFAYVLEVSSPGLSDYLSSDRDFDAFRGFPVRVTTTAPHRGKTLWEGNLIRRDEVNV 140

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +L +  R         +AI    + S +L
Sbjct: 141 YLNQRGRS--------LAIPRSLIASVQL 161


>gi|257126085|ref|YP_003164199.1| hypothetical protein Lebu_1320 [Leptotrichia buccalis C-1013-b]
 gi|257050024|gb|ACV39208.1| protein of unknown function DUF150 [Leptotrichia buccalis C-1013-b]
          Length = 163

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 10/157 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD-GNMTLRDCEELSQAI 76
             +  +    I+  ++EM      +  + +     L+++VE++D    TL DC + S+ I
Sbjct: 2   EQILNEFEKRIELHLKEMKLELADLEYVRDGGYNYLRVYVEKEDGSTTTLDDCIDFSREI 61

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             +   +++I+  + LEVS+PG++R + +  DFLR+ G  +  +   +    +K +GK+ 
Sbjct: 62  DGV--ADDLIDEKFFLEVSTPGVERRLKKPKDFLRFLGEKINVQAKSNIDGAKKFLGKLE 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  FL  E  G+       + I    L  A LI
Sbjct: 120 KFENDTIFLLDENLGK------VVEIPLLKLKKANLI 150


>gi|315452832|ref|YP_004073102.1| ribosome maturation factor rimP [Helicobacter felis ATCC 49179]
 gi|315131884|emb|CBY82512.1| ribosome maturation factor rimP [Helicobacter felis ATCC 49179]
          Length = 156

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + ++++  ++ +      ++ L+E    +L+I ++  +G  +L  C+E S  ISP+L
Sbjct: 3   TSQLETLLENTLQSIGCALYDVAFLKENQTDILRISIKALEGPTSLDVCQEASLLISPLL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           DV   I G Y LEVSS G++R + ++  F    G ++ C+I+ ++    +L G +     
Sbjct: 63  DVHAPIAGSYTLEVSSMGLERTLSKRRHFELSIGELIECKILDNT----RLRGTLEALEG 118

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
               L  E            ++    +  A+ I   E
Sbjct: 119 ENILLNIEG--------TTQSLPLAQIKRAKTIFEFE 147


>gi|157164808|ref|YP_001466379.1| hypothetical protein CCC13826_1497 [Campylobacter concisus 13826]
 gi|259585734|sp|A7ZC71|RIMP_CAMC1 RecName: Full=Ribosome maturation factor rimP
 gi|112801640|gb|EAT98984.1| protein Tmden_0678 [Campylobacter concisus 13826]
          Length = 138

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 15/147 (10%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +  +I E         +  E    + ++++ + DG ++L DCE++S+ +SPI DV   + 
Sbjct: 4   LDKLIRECGVELYDSEIANENGRAIFRVYITK-DGGVSLDDCEKVSRLLSPIFDVTPPVS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSSPG++R + + S F    G +V  +        +K  G+++   E    +E 
Sbjct: 63  GDYNLEVSSPGLERKLSKPSHFKASVGELVKVQTEA-----EKFAGRLVKADEESIAVEN 117

Query: 148 EKRGEKDMNELQIAISFDSLLSARLIV 174
           E        E    I+   +  A+  +
Sbjct: 118 E--------EGIFEINISEIKKAKTYL 136


>gi|116669974|ref|YP_830907.1| hypothetical protein Arth_1413 [Arthrobacter sp. FB24]
 gi|259585698|sp|A0JUT7|RIMP_ARTS2 RecName: Full=Ribosome maturation factor rimP
 gi|116610083|gb|ABK02807.1| protein of unknown function DUF150 [Arthrobacter sp. FB24]
          Length = 205

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 12/159 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDG---NMTLRDCEELSQAIS 77
           A  + ++++P ++        +S+ +   N ++ + V+        ++L    E+S+ +S
Sbjct: 28  AERVRALLEPSVQAHRLYLEDVSIHVAGANRVVHVVVDLPQEETGGVSLDVIAEISKELS 87

Query: 78  PILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            ILD +   +   Y LEVSSPG+ RP+     + R  G +V   ++      + L G+I 
Sbjct: 88  GILDGDPSYDSRPYDLEVSSPGVGRPLTEPRHWHRARGRMVKVNVIQG----ENLTGRIQ 143

Query: 137 GTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
              + G  L  E   K+G K        I FD + + ++
Sbjct: 144 SVDDDGVTLVPEIAAKKGMKPKQGEPEKIPFDRIRNGKV 182


>gi|21911035|ref|NP_665303.1| hypothetical protein SpyM3_1499 [Streptococcus pyogenes MGAS315]
 gi|34223120|sp|Q8K642|RIMP_STRP3 RecName: Full=Ribosome maturation factor rimP
 gi|21905244|gb|AAM80106.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
          Length = 178

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V+++D  +T+ D  +L+ 
Sbjct: 21  IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDKED-GITVEDTSDLTN 78

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 79  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +         + I + ++   R+ V
Sbjct: 139 GDLLAFDGETLTIDYLDK----TRHKIVNIPYQAVAKVRMAV 176


>gi|239815724|ref|YP_002944634.1| hypothetical protein Vapar_2746 [Variovorax paradoxus S110]
 gi|259645131|sp|C5CLW1|RIMP_VARPS RecName: Full=Ribosome maturation factor rimP
 gi|239802301|gb|ACS19368.1| protein of unknown function DUF150 [Variovorax paradoxus S110]
          Length = 212

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 72/188 (38%), Gaps = 42/188 (22%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVE--------------RDDGNMTLRDCE 70
           +   ++  +  + +  V+I        LL++ ++                +  +T+ DCE
Sbjct: 3   LQQTVEQTVAGLGYDLVEIERSAGG--LLRVTIDLPWTAPTSEAVAAGIPEPFVTVEDCE 60

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---- 126
           ++++ +   L+V+ +   + RLEVSSPGIDRP+  + DF R+ G V+   +    G    
Sbjct: 61  KVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRNEQDFERFVGEVIDITLKAPMGAAAA 118

Query: 127 -----DKQKLIGKIMGTSETG----FFLEKEKRGEKDMNELQ-----------IAISFDS 166
                 ++K  G +   +       + +      E    +             +    D 
Sbjct: 119 GQVSATRKKFRGTLERVAGADGAPGWQIVWSDAPEPKPGQKVSKKRAPAKLHALGFVLDE 178

Query: 167 LLSARLIV 174
           L  ARL  
Sbjct: 179 LRDARLAP 186


>gi|50914807|ref|YP_060779.1| hypothetical protein M6_Spy1461 [Streptococcus pyogenes MGAS10394]
 gi|71904118|ref|YP_280921.1| hypothetical protein M28_Spy1456 [Streptococcus pyogenes MGAS6180]
 gi|71911226|ref|YP_282776.1| hypothetical protein M5005_Spy_1413 [Streptococcus pyogenes
           MGAS5005]
 gi|94989045|ref|YP_597146.1| hypothetical protein MGAS9429_Spy1415 [Streptococcus pyogenes
           MGAS9429]
 gi|94991043|ref|YP_599143.1| hypothetical protein MGAS10270_Spy1534 [Streptococcus pyogenes
           MGAS10270]
 gi|94992936|ref|YP_601035.1| hypothetical protein MGAS2096_Spy1439 [Streptococcus pyogenes
           MGAS2096]
 gi|209559842|ref|YP_002286314.1| hypothetical protein Spy49_1341c [Streptococcus pyogenes NZ131]
 gi|34223094|sp|P59819|RIMP_STRP1 RecName: Full=Ribosome maturation factor rimP
 gi|73921027|sp|Q5XAG7|RIMP_STRP6 RecName: Full=Ribosome maturation factor rimP
 gi|91208006|sp|Q48RU4|RIMP_STRPM RecName: Full=Ribosome maturation factor rimP
 gi|166979769|sp|Q1JFG0|RIMP_STRPD RecName: Full=Ribosome maturation factor rimP
 gi|166979847|sp|Q1JAB7|RIMP_STRPB RecName: Full=Ribosome maturation factor rimP
 gi|166979918|sp|Q1JKG7|RIMP_STRPC RecName: Full=Ribosome maturation factor rimP
 gi|226695935|sp|B5XHV7|RIMP_STRPZ RecName: Full=Ribosome maturation factor rimP
 gi|50903881|gb|AAT87596.1| Hypothetical cytosolic protein [Streptococcus pyogenes MGAS10394]
 gi|71803213|gb|AAX72566.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS6180]
 gi|71854008|gb|AAZ52031.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS5005]
 gi|94542553|gb|ABF32602.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
 gi|94544551|gb|ABF34599.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
 gi|94546444|gb|ABF36491.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
 gi|209541043|gb|ACI61619.1| transcription termination protein NusA-like protein [Streptococcus
           pyogenes NZ131]
          Length = 178

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V++ +G +T+ D  +L+ 
Sbjct: 21  IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDK-EGGITVEDTSDLTN 78

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 79  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +         + I + ++   R+ V
Sbjct: 139 GDLLAFDGETLTIDYLDK----TRHKIVNIPYQAVAKVRMAV 176


>gi|220907501|ref|YP_002482812.1| hypothetical protein Cyan7425_2088 [Cyanothece sp. PCC 7425]
 gi|254801539|sp|B8HUA6|RIMP_CYAP4 RecName: Full=Ribosome maturation factor rimP
 gi|219864112|gb|ACL44451.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7425]
          Length = 154

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 9/153 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L  +I  +  P+  +++   V           +L++ +     + +L DCE +S  +   
Sbjct: 5   LIPEILDLAVPLAADLNLEVVGAVFHTHLNPPVLRVDIRNLSADTSLEDCERMSHRLETA 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  +++ G Y LEVSSPGI R +    +F+ + G  V          +++ +G ++   
Sbjct: 65  LDAADLVAGTYVLEVSSPGISRLLSSDREFVSFRGFSVIVRTREPIAGQREWVGNLVQRD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           E   +L ++ R         I+I    +   +L
Sbjct: 125 EEFVYLNQKGRA--------ISIPRHLVTQVQL 149


>gi|315639113|ref|ZP_07894280.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
 gi|315480817|gb|EFU71454.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
          Length = 139

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 14/144 (9%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ + +E         L+ E    + +I++ + +G ++L DC  LS+ +SPI DVE  + 
Sbjct: 4   LKALCKEAGVELYDSELVSENGKKIYRIYIMK-EGGVSLEDCARLSEILSPIFDVEPPVS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y LEVSS G++R +     F +  G ++          K+K+ GK++       FL+ 
Sbjct: 63  GEYFLEVSSAGLERKLSTLEHFEKSVGEMLKITTSE----KEKIQGKLLKVEGENIFLQD 118

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
           EK         +I I F  +  A+
Sbjct: 119 EK--------AEICIEFSQVKKAK 134


>gi|157414451|ref|YP_001481707.1| hypothetical protein C8J_0131 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|205425409|sp|A8FJU3|RIMP_CAMJ8 RecName: Full=Ribosome maturation factor rimP
 gi|157385415|gb|ABV51730.1| hypothetical protein C8J_0131 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|315931533|gb|EFV10500.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 140

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAGLSFYDDELVSENGRKIYRIYVQKEGGVNLDDCARLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|297191725|ref|ZP_06909123.1| UPF0090 protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721419|gb|EDY65327.1| UPF0090 protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 165

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 9/152 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I +    +  +L+I V+ D+  + L  C ELS+AIS  LD
Sbjct: 7   ERLRGLLEPLVSAAELDLEEIEVSRAGRRRMLRITVDSDE-GVELDACAELSRAISEKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + EG Y LEVSSPG DRP+     F+R  G +V  ++         L+ +++   +
Sbjct: 66  ETDAMGEGEYVLEVSSPGADRPLSEHRHFVRATGRLVKLQLKEGGD----LVARLLTVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  LE      +     ++  +FD ++ AR+
Sbjct: 122 EGLDLEVPGVKGRKPTARRV--AFDDIVKARV 151


>gi|329947838|ref|ZP_08294770.1| hypothetical protein HMPREF9056_02685 [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328523462|gb|EGF50560.1| hypothetical protein HMPREF9056_02685 [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 165

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 11/169 (6%)

Query: 10  KYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN--MTL 66
            ++PR   D  LA  ++ ++ PV+ +       +         ++++FV+  DG   + +
Sbjct: 3   AHDPRKRSD-ALARSLTDLLAPVVADAGLHLEAVETTRAGRYSVVRVFVDLADGPGDLDI 61

Query: 67  RDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG 126
                ++ A+S  LD  + ++G Y LEVS+PG +R +     F R  GH           
Sbjct: 62  DTLGPVTAAVSQALDESDPVKGQYTLEVSTPGAERELSTLRHFRRAVGHSARVRTAD--- 118

Query: 127 DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
             ++L G +      G           +++ ++  I+   +  AR++VT
Sbjct: 119 --EELTGVVTAADAGGD--NDAGLVSIEVDGVERRIALGDIAEARMVVT 163


>gi|311104986|ref|YP_003977839.1| hypothetical protein AXYL_01790 [Achromobacter xylosoxidans A8]
 gi|310759675|gb|ADP15124.1| hypothetical protein AXYL_01790 [Achromobacter xylosoxidans A8]
          Length = 182

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 21/163 (12%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+ ++ +  +  M    V +        LL++ ++R  G + + DCE++S+ +S + +V
Sbjct: 17  ADLFALTKEALAGMDVELVDVERAALG--LLRVTIDRV-GGVRIEDCEQVSRQLSRVFEV 73

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM------ 136
           EN+   + R+EV SPG+DRP+  +++F R+ G  +  ++  +   ++   G +       
Sbjct: 74  ENV--DYKRMEVGSPGVDRPLRNEAEFRRFAGERIEIKLREALDGRKVFAGILTMPEDDA 131

Query: 137 -------GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                  G  +T F LE E    K      +  + D +  A+L
Sbjct: 132 AASDAAAGMQKTVFGLEFE---AKKNEIQVLNFTVDDIERAKL 171


>gi|57237145|ref|YP_178157.1| hypothetical protein CJE0133 [Campylobacter jejuni RM1221]
 gi|218561819|ref|YP_002343598.1| hypothetical protein Cj0138 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|34223082|sp|Q9PIY9|RIMP_CAMJE RecName: Full=Ribosome maturation factor rimP
 gi|81354202|sp|Q5HX28|RIMP_CAMJR RecName: Full=Ribosome maturation factor rimP
 gi|57165949|gb|AAW34728.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
 gi|112359525|emb|CAL34309.1| conserved hypothetical protein Cj0138 [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315057578|gb|ADT71907.1| hypothetical protein CJS3_0137 [Campylobacter jejuni subsp. jejuni
           S3]
 gi|315926922|gb|EFV06284.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 140

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE+ + G
Sbjct: 3   LEALCKEAGLSFYDDELVSENGRKIYRIYVQKEGGVNLDDCARLSEILSPIFDVESPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|307747095|gb|ADN90365.1| UPF0090 protein [Campylobacter jejuni subsp. jejuni M1]
          Length = 140

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAGLSFYDDELVSENGRKIYRIYVQKEGGVNLDDCARLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F  +  A+
Sbjct: 119 ENKEKT------TINFSDIRKAK 135


>gi|306826864|ref|ZP_07460164.1| protein of hypothetical function DUF150 [Streptococcus pyogenes
           ATCC 10782]
 gi|34223095|sp|P59820|RIMP_STRP8 RecName: Full=Ribosome maturation factor rimP
 gi|304430882|gb|EFM33891.1| protein of hypothetical function DUF150 [Streptococcus pyogenes
           ATCC 10782]
          Length = 178

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V++ +G +T+ D  +L+ 
Sbjct: 21  IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDK-EGGITVEDTSDLTN 78

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 79  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +         + I + ++   R+ V
Sbjct: 139 GDLLAFDGETLTIDYLDK----TRHKIVNIPYQAVAKVRMAV 176


>gi|54026040|ref|YP_120282.1| hypothetical protein nfa40690 [Nocardia farcinica IFM 10152]
 gi|81373776|sp|Q5YSC3|RIMP_NOCFA RecName: Full=Ribosome maturation factor rimP
 gi|54017548|dbj|BAD58918.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 217

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 16/165 (9%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-----LLQIFVERDDGNMTLRDCEE 71
             M     +S ++  ++E   F    + +    +       + + V+  DG   L    E
Sbjct: 1   MPMPTEERVSQLVAGLVERRGFDLEGVEITRAGSRADAQPRVTVVVDS-DGAADLDAVAE 59

Query: 72  LSQAISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---- 126
           LS  +S +LD  +I     Y LEV++PG+DRP+     + R  G  V   +   +     
Sbjct: 60  LSSEMSVVLDDTDIFGDSPYLLEVTTPGVDRPLTAPRHWRRAQGRKVRITLRPGAEPPDP 119

Query: 127 -DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
                   ++         L    +     N  ++ +    +  A
Sbjct: 120 GGSAGFEARVGVLDGEQIALVLGGK----RNPHRVRVPLADIERA 160


>gi|284925431|gb|ADC27783.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 140

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE+ + G
Sbjct: 3   LEALCKEAGLSFYDDELVSENGKKIYRIYVQKEGGVNLDDCARLSEILSPIFDVESPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|325479429|gb|EGC82525.1| hypothetical protein HMPREF9290_1585 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 147

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  + +  I E+ +  V I     K   +  F   ++  +T+ DCE++S  +  
Sbjct: 1   MDLTDRLREIFEADISELGYELVDIEYKGSKGNKILTFFIFNEEGITIDDCEKVSAFLDT 60

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  ++I+  Y LEVSS  + RP+    D  R    V+  ++       +  +GK+   
Sbjct: 61  RLDELDLIKDSYYLEVSSQDLSRPLKTDRDIERNINEVLKVKMKDG----EVFLGKVSDI 116

Query: 139 SETGFFLEKEKRGEKDMNELQI 160
           +E  +  + E    + +N+  +
Sbjct: 117 NEDTYEFDLEDGTSRQVNKSDV 138


>gi|259016315|sp|Q8DHL1|RIMP_THEEB RecName: Full=Ribosome maturation factor rimP
          Length = 157

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 9/149 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++ Q V ++     V +  L  +   +L++ V   + + +L DCE LS+A+   LD  
Sbjct: 10  VQTLAQQVADQEHLDLVSVQWLTHQSPPILRVEVRHPENDTSLEDCERLSRALEMALDEL 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
              E  Y LEVSSPG+   +    DF  + G  V          K    G ++   E   
Sbjct: 70  PEFEFAYVLEVSSPGLSDYLSSDRDFDAFRGFPVRVTTTAPHRGKTLWEGNLIRRDEVNV 129

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +L +  R         +AI    + S +L
Sbjct: 130 YLNQRGRS--------LAIPRSLIASVQL 150


>gi|118474205|ref|YP_892625.1| hypothetical protein CFF8240_1491 [Campylobacter fetus subsp. fetus
           82-40]
 gi|261885775|ref|ZP_06009814.1| hypothetical protein CfetvA_11986 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|259585736|sp|A0RQZ2|RIMP_CAMFF RecName: Full=Ribosome maturation factor rimP
 gi|118413431|gb|ABK81851.1| hypothetical protein CFF8240_1491 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 140

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 67/141 (47%), Gaps = 13/141 (9%)

Query: 32  VIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
           ++ +         ++ E   ++ ++++ + +G ++L +CE +S+ +SPI DV   + G +
Sbjct: 7   LVSQCGVDLYDAEVVNENGRVIYRVYITK-NGGVSLEECEAVSKLLSPIYDVMPPVSGEW 65

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            LEVSSPG++R + +   F    G      +     DK ++ GKI+   +    +  +  
Sbjct: 66  ILEVSSPGLERKLSKIEHFTLSIGEFAKIIL----NDKTEIKGKIVSVKDDNICINIKNN 121

Query: 151 GEKDMNELQIAISFDSLLSAR 171
                    I + F+++  A+
Sbjct: 122 -------ESIEVKFENIKKAK 135


>gi|320008231|gb|ADW03081.1| protein of unknown function DUF150 [Streptomyces flavogriseus ATCC
           33331]
          Length = 165

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 7/151 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  +++P++        +I +       +   +   +  + L  C ELS++IS  LD 
Sbjct: 7   DRLRGLLEPLVSAKELDLEEIEVSRAGRRRVLRVIVDSEDGVELDTCAELSRSISEKLDE 66

Query: 83  ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + + E  Y LEVSSPG DRP+     ++R  G +    +         L+ +I+G  + 
Sbjct: 67  TDAMGEDEYVLEVSSPGADRPLTEHRHYVRATGRLARLTLGEGGE----LVARILGVDDE 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G  LE      +     ++  +FD +  AR+
Sbjct: 123 GLDLEVPGVKGRKPTSRRV--AFDEISRARV 151


>gi|227486446|ref|ZP_03916762.1| protein of hypothetical function DUF150 [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227235627|gb|EEI85642.1| protein of hypothetical function DUF150 [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 147

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 11/154 (7%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   + + ++  IE + +  V +  +  K+    IF    +  +T+ DCE +S  +  
Sbjct: 1   MDLIEKLKNALESDIENLGYDLVDLEFIGGKDGNRLIFYIYKEDGITIDDCERVSGFLDE 60

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  ++I+  Y LEVSS  + RP+    D LR    ++  ++        K+       
Sbjct: 61  KLDELDLIKSSYYLEVSSQDLSRPLKTDKDLLRNKDELLKIKLKNGDLILAKMK------ 114

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 ++ E       +   I I+   +   ++
Sbjct: 115 -----DIKDESIVFAKEDGKDIEINKSDIKEIKI 143


>gi|160947564|ref|ZP_02094731.1| hypothetical protein PEPMIC_01499 [Parvimonas micra ATCC 33270]
 gi|158446698|gb|EDP23693.1| hypothetical protein PEPMIC_01499 [Parvimonas micra ATCC 33270]
          Length = 154

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 3/155 (1%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELS 73
           +  +  L   I    + ++ E     V +  ++E K  +L+IF+++ DG + L  CE  S
Sbjct: 1   MKKENELLKTIEKNFKTILLEKGIYFVNVEYVKEPKGNVLRIFIDK-DGGVDLDSCEMTS 59

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             IS  LD  + IE  Y LEVSSPG++R +        + G  V  +      ++++ IG
Sbjct: 60  NIISDWLDEVDPIEDSYFLEVSSPGVEREIKSDEQLKTFIGKKVLVKCYKKINNEKEFIG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
            +         LE   +     +   IAI    + 
Sbjct: 120 YLKSFDREKLTLEI-GKSSIIFSRKDIAIIKSQIE 153


>gi|326799023|ref|YP_004316842.1| ribosome maturation factor rimP [Sphingobacterium sp. 21]
 gi|326549787|gb|ADZ78172.1| Ribosome maturation factor rimP [Sphingobacterium sp. 21]
          Length = 154

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           MG+   ++ +++  I +      V + +       L I ++  D  +T++DC  +S+ + 
Sbjct: 1   MGIEKRVTELVEEKIADRPDLFLVDVKMHSNGK--LIIHMDG-DQGITIQDCAAISRHVG 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ EN IE  Y LEVSSPGID P+     + +  G  +  ++   S    K  G ++ 
Sbjct: 58  YHLEEENAIENAYNLEVSSPGIDTPLKLLRQYQKNIGRSITLKMADGS----KREGTLLA 113

Query: 138 TSETGFFL-EKEKRGEKDMNELQIAISFDSLLSARL 172
            SE    L E  K   K   +++  +  D ++  ++
Sbjct: 114 ASEKEMKLAETIKEKGKKAIQVETVVPLDQVIETKV 149


>gi|291298940|ref|YP_003510218.1| hypothetical protein Snas_1418 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568160|gb|ADD41125.1| protein of unknown function DUF150 [Stackebrandtia nassauensis DSM
           44728]
          Length = 162

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 14/152 (9%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             I +V++PV+ E  +   ++ + +     L   +   D  + L     +S+ +S  LD 
Sbjct: 7   KRILAVLEPVLAEAGYDLEELKVSQAGRRTLVRVLVDRDAGVDLDAIASVSRVLSKALDK 66

Query: 83  ENIIEG-----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
               +G      Y LEVSSPG+DRP+     + R  G +V+  +  +      +  +I  
Sbjct: 67  SEADDGPFATNSYTLEVSSPGVDRPLTLPRHWRRNVGRLVSVRLSDA-----TVTARIHA 121

Query: 138 TSETGFFLEKEKR----GEKDMNELQIAISFD 165
             +    LE           D+   ++ + F 
Sbjct: 122 ADDENVELELSDGTRRVAYGDLGPGRVQLEFS 153


>gi|257460847|ref|ZP_05625948.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
 gi|257442178|gb|EEV17320.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
          Length = 139

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 14/144 (9%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++ +  E   +   +  + E    + +I + +  G + L DCE LS+ +SPI DVE  +E
Sbjct: 4   LEALARECGVQLYDVETVSENGRTIYRISITKA-GGVGLDDCERLSRLLSPIYDVEPPLE 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G + LEV SPG++R + +   F    G +V           QKL G+++        L  
Sbjct: 63  GEWTLEVGSPGLERKLSKPQHFANSVGELVRLSCTDG----QKLSGEVLDCEGGVLRLRT 118

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
           +          ++++  D +  AR
Sbjct: 119 DG--------GEVSVRLDEIKKAR 134


>gi|329736175|gb|EGG72447.1| hypothetical protein SEVCU028_0396 [Staphylococcus epidermidis
           VCU028]
          Length = 114

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 5/115 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
             +   + ++IQPV+ +++F  V I  ++  K+  L+I +++ +G + L DC   S+ IS
Sbjct: 2   SKITEQVEALIQPVLNDLNFELVDIEYVKEGKDHFLRISIDK-EGGVDLNDCTIASEKIS 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ++D  + I   Y L+V+SPG +RP+ +K     +    +   + L     +++ 
Sbjct: 61  EVMDENDPIPEMYYLDVASPGAERPIKKK---KIFIMLSINPFLYLFMHQLKEIK 112


>gi|325847928|ref|ZP_08170099.1| hypothetical protein HMPREF9246_0391 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480797|gb|EGC83851.1| hypothetical protein HMPREF9246_0391 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 146

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 6/150 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +   ++  I  + +  V I    E KN +L+ F+ + DG +T+ DCE+ S  +S
Sbjct: 1   MDLISKLKENLESDINNLGYELVDIEFVTEGKNKILRFFIYK-DGGITIDDCEKTSNLLS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSSP + RP+    D  R    ++  ++       +K +  I  
Sbjct: 60  ERLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELLEVKLKNG----EKFLANIEE 115

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSL 167
             E     + E   ++        I  + +
Sbjct: 116 IKEDSLVFKCEDGQKEVDKNEIKTIKIEIV 145


>gi|283955583|ref|ZP_06373077.1| hypothetical protein C1336_000030016 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792926|gb|EFC31701.1| hypothetical protein C1336_000030016 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 140

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAGLSFYDDELVSENGRKIYRIYVQKEGGVNLDDCARLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V       + +K+K   KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKIT----ANEKEKFEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|320528333|ref|ZP_08029495.1| hypothetical protein HMPREF9430_01620 [Solobacterium moorei F0204]
 gi|320131247|gb|EFW23815.1| hypothetical protein HMPREF9430_01620 [Solobacterium moorei F0204]
          Length = 153

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 5/151 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             ++ + QPV +E   R  +I  L      LQ+ ++ D   + L  C E+S+ +  +LD 
Sbjct: 5   DKLTKLFQPVFDECHVRLYEIVWL-GNEKTLQVAIDNDAHAIDLDICAEVSEKLGVVLDK 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I+  Y LEV SPG +R +   ++F +     +  E+     +  ++ G +   S   
Sbjct: 64  YDPIKEEYSLEVCSPGAEREIKDYAEFEQLVDEYIYVELKEPFKNMVEITGYVRSASVDA 123

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             LE   +  K        I  +++  ARL 
Sbjct: 124 IELEYRDKAVK----RTATIEKNNIRFARLA 150


>gi|139473253|ref|YP_001127968.1| hypothetical protein SpyM50378 [Streptococcus pyogenes str.
           Manfredo]
 gi|166990902|sp|A2RCZ7|RIMP_STRPG RecName: Full=Ribosome maturation factor rimP
 gi|134271499|emb|CAM29720.1| conserved hypothetical protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 178

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +  +   ++  + P I+   +  V +   +   + +L I V++ +G +T+ D  +L+ 
Sbjct: 21  IANTSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDK-EGGITVEDTSDLTN 78

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 79  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +         + I +  +   R+ V
Sbjct: 139 GDLLAFDGETLTIDYLDK----TRHKIVNIPYQVVAKVRMAV 176


>gi|226226959|ref|YP_002761065.1| hypothetical protein GAU_1553 [Gemmatimonas aurantiaca T-27]
 gi|259585777|sp|C1A8N5|RIMP_GEMAT RecName: Full=Ribosome maturation factor rimP
 gi|226090150|dbj|BAH38595.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 155

 Score = 82.7 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 7/155 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER-DDGNMTLRDCEELSQAISPIL 80
             I  ++   +  + F  V++     +   +L+I ++R D+  +T+ DC  +S+A+   L
Sbjct: 3   EAIEPIVTQELAGLGFDLVELRRGGSRARPVLEIRIDRRDEEKVTIDDCARVSRALEARL 62

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +   ++   Y LEVSSPG DRP+   +D+ R+ G        L +G KQ++    +    
Sbjct: 63  EAAALVGEQYVLEVSSPGADRPLRHAADWRRFVGRRATVTSGLLAGGKQEVEIVAVTGEG 122

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                  E    +D    ++++    +  ARL   
Sbjct: 123 GA-----EVALVRDPKGREVSVPLREVSQARLAFN 152


>gi|212696552|ref|ZP_03304680.1| hypothetical protein ANHYDRO_01090 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676488|gb|EEB36095.1| hypothetical protein ANHYDRO_01090 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 146

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 6/150 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +   ++  I  + +  V I    E  N +L+ F+ + DG +T+ DCE+ S  +S
Sbjct: 1   MDLISKLKENLESDINNLGYELVDIEFVTEGNNKILRFFIYK-DGGITIDDCEKTSNLLS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD  ++I+  Y LEVSSP + RP+    D  R    ++  ++       +K +  I  
Sbjct: 60  ERLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELLEVKLKNG----EKFLANIEE 115

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSL 167
             E     + E   ++        I  + +
Sbjct: 116 IKENSLVFKCEDEQKEVDKNEIKTIKIEIV 145


>gi|21224052|ref|NP_629831.1| hypothetical protein SCO5703 [Streptomyces coelicolor A3(2)]
 gi|256784870|ref|ZP_05523301.1| hypothetical protein SlivT_10300 [Streptomyces lividans TK24]
 gi|289768764|ref|ZP_06528142.1| UPF0090 protein [Streptomyces lividans TK24]
 gi|34223163|sp|Q9KYR2|RIMP_STRCO RecName: Full=Ribosome maturation factor rimP
 gi|7801275|emb|CAB91139.1| hypothetical protein SC5H4.27 [Streptomyces coelicolor A3(2)]
 gi|289698963|gb|EFD66392.1| UPF0090 protein [Streptomyces lividans TK24]
          Length = 177

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 9/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I++    +  +L + V+  D    L    ++S+A+S  LD
Sbjct: 7   ERLRELLEPLVASQGLDLEEIAVDSVGRRRVLSVVVDS-DTGADLDRIADVSRALSAKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + EG Y LEV +PG +R + +   ++R    +V  ++         L+ +I+   E
Sbjct: 66  ETDAMGEGEYTLEVGTPGAERSLTQHRHYVRATDRLVRFQLREGGE----LVARILAVDE 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  LE    G K        + F  +  AR+ V
Sbjct: 122 DGLDLEV--PGVKGRRPTTRRLPFGDIDKARVQV 153


>gi|94994922|ref|YP_603020.1| hypothetical protein MGAS10750_Spy1526 [Streptococcus pyogenes
           MGAS10750]
 gi|166979761|sp|Q1J5B0|RIMP_STRPF RecName: Full=Ribosome maturation factor rimP
 gi|94548430|gb|ABF38476.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
          Length = 178

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 9/162 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQ 74
                +   ++  + P I+   +  V +   +   + +L I V++ +G +T+ D  +L+ 
Sbjct: 21  IAITSIIDIVTKTVTPEIKA-PYELVDVEYDKMGSDYILSILVDK-EGGITVEDTSDLTN 78

Query: 75  AISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
            ISP+LD    +     Y LEVSSPG++RP+          G  +   +  +    +   
Sbjct: 79  IISPLLDTIDPDPFPNQYMLEVSSPGLERPLKTADSLKAAVGSYINVSLYQAIDKVKVFQ 138

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G ++        ++   +         + I + ++   R+ V
Sbjct: 139 GDLLAFDGETLTIDYLDK----TRHKIVNIPYQAVAKVRMAV 176


>gi|206895232|ref|YP_002247277.1| protein of unknown function, putative [Coprothermobacter
           proteolyticus DSM 5265]
 gi|259585743|sp|B5Y930|RIMP_COPPD RecName: Full=Ribosome maturation factor rimP
 gi|206737849|gb|ACI16927.1| protein of unknown function, putative [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 169

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            D+   I  ++    F  + +    EK   +   V   + ++T+ DCE+L++AI P+L+ 
Sbjct: 8   ADLEERISKIVVSKGFYFIDLEERMEKGAHIISVVVHGEPSVTIGDCEKLTRAILPLLES 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
                 +  LEV+SPG+DR + R+ ++  + G V+        G  Q +  K++G     
Sbjct: 68  FPWYGDNDHLEVTSPGLDRVLKREWEYEIFKGRVIDIS-FDRDGKSQTIRAKLVGRENEN 126

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTD 176
             +E E             I FD +  A+L+  +
Sbjct: 127 VVIEYEGNY--------FRIPFDQVRKAKLVFDE 152


>gi|291166363|gb|EFE28409.1| hypothetical protein HMPREF0389_00324 [Filifactor alocis ATCC
           35896]
          Length = 152

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 76/150 (50%), Gaps = 4/150 (2%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               +A  I  +   V++E  +  V +  ++E     L++FV++ DG + + +  ++++ 
Sbjct: 1   MSKRIAVQIEELFLSVLDEK-YELVDVEYVKEGAFYYLRVFVDK-DGGLDIDEISDITRV 58

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           ++ +LD ++ I+  Y LEVS+PG+ R + ++ DF+R +G  +  ++      +++L G +
Sbjct: 59  LNKLLDEKDPIQQQYFLEVSTPGLGRALKKERDFIRESGKEIELKLYQPVNGQKELSGVL 118

Query: 136 MGTSE-TGFFLEKEKRGEKDMNELQIAISF 164
           +G  E     ++ E        +   +I  
Sbjct: 119 IGLDETGNIVIQSEDEQLCLSKKDIASIKL 148


>gi|320108354|ref|YP_004183944.1| hypothetical protein AciPR4_3194 [Terriglobus saanensis SP1PR4]
 gi|319926875|gb|ADV83950.1| protein of unknown function DUF150 [Terriglobus saanensis SP1PR4]
          Length = 195

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 39/193 (20%)

Query: 19  MGLA-GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG-------------- 62
           M L    I      V        V++S     K   LQIFVE++                
Sbjct: 1   MALELDKIRDAADRVAASHQLEIVEVSFTGAGKFSALQIFVEKNAEGRAAMLREAETDES 60

Query: 63  -------------NMTLRDCEELSQAISPILDVENIIEG--HYRLEVSSPGIDRPMVRKS 107
                         +T +DC   +     +LDVE ++ G   Y LEVSSPGI+R + + +
Sbjct: 61  KALPRGVPVEALSGVTHQDCAAFATDFGTLLDVEELVPGTTEYTLEVSSPGIERKLFKTA 120

Query: 108 DFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMN-------ELQI 160
           D+ R+ G +V  +   +    +   G++   ++    L+      K             +
Sbjct: 121 DYERFAGSLVTLKTFQAINGTKNFTGRMT-FTDGTATLDLAAVKAKGKKKGTKAEAPQTV 179

Query: 161 AISFDSLLSARLI 173
            I F+++  A+L+
Sbjct: 180 EIPFNAIEKAQLV 192


>gi|242309141|ref|ZP_04808296.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239524182|gb|EEQ64048.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 143

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 17/153 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M ++ ++ + IQ ++E    +   I+ L+E  N +L+I + +   +++L DC+E+S A+S
Sbjct: 1   MLISQELQAKIQKLVESFGCKIYDITTLKENENQILRISITKK-PSVSLDDCQEVSLALS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDVE      Y LEVSSPGI+RP+  K  F    G ++  + +          GK++ 
Sbjct: 60  PLLDVEIPNFEKYYLEVSSPGIERPLKTKEHFEDAIGELIKIKTISKQD----FKGKLIA 115

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
             +    LE  +            I    +  A
Sbjct: 116 IDDESLKLESGE-----------IIPISEIKKA 137


>gi|226366089|ref|YP_002783872.1| hypothetical protein ROP_66800 [Rhodococcus opacus B4]
 gi|254806567|sp|C1B310|RIMP_RHOOB RecName: Full=Ribosome maturation factor rimP
 gi|226244579|dbj|BAH54927.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 190

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 12/151 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ +I  +++   +    +++    K+  ++I V+  D  + L     LS  IS + 
Sbjct: 6   KERVTELISDLVQRQGYDVEDVAVTLAGKHSAVRIMVDS-DAGLELDAVANLSHEISEVF 64

Query: 81  D-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D V +  E  Y LEV+SPGIDRP+  +  + R  G     ++       + ++G+I    
Sbjct: 65  DSVSDFGESPYTLEVTSPGIDRPLTHERHWRRARGRKARIDLAH-----ETVVGRIGALD 119

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
                +    R   D+      I+   +  A
Sbjct: 120 GDSVAVVIGSRTGPDVR----RIALADIQKA 146


>gi|309804436|ref|ZP_07698504.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
 gi|308166249|gb|EFO68464.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c]
          Length = 115

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 31  PVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIE 87
           P++       V I  ++E N   L+I+V+R+   + + +   LS+++S  LD    + + 
Sbjct: 1   PLVHARGDELVDIEYVKENNQNYLRIYVDREPNGIDIDEIATLSESVSEQLDLINPDPLP 60

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
             Y LE+SSPG++RP+  ++D+ +     V   +      ++ + 
Sbjct: 61  DPYILELSSPGVERPIKTEADWCKAKNDYVHVGLYKKLMGRKVMK 105


>gi|299530200|ref|ZP_07043626.1| hypothetical protein CTS44_05471 [Comamonas testosteroni S44]
 gi|298721857|gb|EFI62788.1| hypothetical protein CTS44_05471 [Comamonas testosteroni S44]
          Length = 182

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 70/173 (40%), Gaps = 36/173 (20%)

Query: 34  EEMSFRSVQISLLEEKNLLLQIFVERD------------DGNMTLRDCEELSQAISPILD 81
             + +  V+I        LL+I ++              +  +T+ DCE++++ +   L+
Sbjct: 2   TGLGYDLVEIERSAGG--LLRITIDLPWQAPEEGAPELPEQFVTVEDCEKVTRQLQFALE 59

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSG---------DKQKLI 132
           V+     + RLEVSSPGIDR +  + DF+R+ G  V   +    G         +++K  
Sbjct: 60  VD--GADYARLEVSSPGIDRLLRHEQDFIRFEGSEVDLTLKAPIGAAGGDKINANRKKFR 117

Query: 133 GKIMGTSETGFFLEKEK-----------RGEKDMNELQIAISFDSLLSARLIV 174
           G +  T E G+ +               +  +      +  + D L  ARL  
Sbjct: 118 GTLERTEEGGWQIVWSDEPPPKPGVRVSKKREPAPLNAMGFTLDELREARLAP 170


>gi|227537267|ref|ZP_03967316.1| protein of hypothetical function DUF150 [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227242871|gb|EEI92886.1| protein of hypothetical function DUF150 [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 156

 Score = 81.6 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 9/158 (5%)

Query: 17  GDMGLAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ + + +      V I +      +L+I V+  D  + + DC ++S+ 
Sbjct: 1   MKTKVEQRVEELVLEKIGDREDLFIVSIKMQGNG--VLEILVDG-DSGIAIDDCVKISRH 57

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +   L+ EN+IE  YRLEVSSPGID P+V    + +  G  V  +        +K  GK+
Sbjct: 58  VGFHLEEENVIETAYRLEVSSPGIDSPLVLIRQYEKNIGRNVRVKNHEG----EKREGKL 113

Query: 136 MGTSETGFFLEKEKRGEKDMN-ELQIAISFDSLLSARL 172
           +  +E+   +E+ K+ +      ++  I F+ +   ++
Sbjct: 114 LDVTESAITIEESKKEKGKKAVPVESVIPFEQIKETKV 151


>gi|222823265|ref|YP_002574838.1| conserved hypothetical protein (DUF150 domain protein)
           [Campylobacter lari RM2100]
 gi|254801701|sp|B9KEV2|RIMP_CAMLR RecName: Full=Ribosome maturation factor rimP
 gi|222538486|gb|ACM63587.1| conserved hypothetical protein (DUF150 domain protein)
           [Campylobacter lari RM2100]
          Length = 140

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAGLSFYDDELVSENGKKIYRVYVQKEGGVKLDDCARLSEILSPIFDVEPPVSG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSS G++R + +   F +    +V          K+K+  KI+   +    LE  
Sbjct: 63  EYFLEVSSCGLERKLSKIEHFAKSINELVKITTSE----KEKIEAKIVSVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           K  EK        + F  +  AR
Sbjct: 119 KTQEKT------TLKFSDIRKAR 135


>gi|256379833|ref|YP_003103493.1| hypothetical protein Amir_5837 [Actinosynnema mirum DSM 43827]
 gi|255924136|gb|ACU39647.1| protein of unknown function DUF150 [Actinosynnema mirum DSM 43827]
          Length = 174

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 13/151 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           LA  ++ V++  +E + +    + + +     L   V   D  + L +  + S+A+S  L
Sbjct: 9   LAAQLTPVVREAVEAIGYDLELLDVNQAGRRRLVKVVVDGDEGIGLDEVAQASRAVSAAL 68

Query: 81  D-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  E++I G Y LEV+SPG DRP+ R   +LR    +V  +            G++    
Sbjct: 69  DANEHLIAGPYTLEVTSPGADRPLTRPRHWLRARLRLVKVKQPEQVE----WFGRVGDCD 124

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           +TG  L  +             + + ++  A
Sbjct: 125 DTGVVLLVKGELR--------RVEYSAIERA 147


>gi|149277311|ref|ZP_01883453.1| hypothetical protein PBAL39_10486 [Pedobacter sp. BAL39]
 gi|149232188|gb|EDM37565.1| hypothetical protein PBAL39_10486 [Pedobacter sp. BAL39]
          Length = 154

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 77/156 (49%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   ++ +I+  I +      V++ +L      L I V+ D+  ++++DC  +S+ + 
Sbjct: 1   MQVEKRVTELIEEKISDRPELFLVEVKMLPNNK--LIIHVDGDE-GISIQDCAAISRHVG 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ EN IE  Y LEVSSPG+  P+  K  + +  G  V+ ++       +   GK++ 
Sbjct: 58  FHLEEENTIEKAYNLEVSSPGVGEPLKLKRQYDKNIGREVSVKLS----GGEVKEGKLLS 113

Query: 138 TSETGFFLEKE-KRGEKDMNELQIAISFDSLLSARL 172
             + G  +E + K   K    ++ ++ F+S+   ++
Sbjct: 114 VDDKGIIIEAKVKEKGKKAQLVETSVDFNSITETKV 149


>gi|154509103|ref|ZP_02044745.1| hypothetical protein ACTODO_01620 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798737|gb|EDN81157.1| hypothetical protein ACTODO_01620 [Actinomyces odontolyticus ATCC
           17982]
          Length = 156

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 15/153 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERD--DGNMTLRDCEELSQAISP 78
            G +  ++ PV+ +       +     +   LL++ VE     G +      ++S+A+S 
Sbjct: 7   EGPLEELLAPVVAQSGLELDSVIRSRSDAMPLLRVIVEAPIGAGGIDSDTLADVSRAVSK 66

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDV + I+G Y LEVS+PG +R + +   ++R  G +V  ++         + G+++  
Sbjct: 67  ALDVADPIDGEYLLEVSTPGAERELTKVGHWMRQIGRLVRIKLRAGG----YVSGRVVAA 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +ET   ++ +             I +  +  AR
Sbjct: 123 NETSATIDVDGE--------TTIIDYQDMRKAR 147


>gi|56752081|ref|YP_172782.1| hypothetical protein syc2072_d [Synechococcus elongatus PCC 6301]
 gi|81300832|ref|YP_401040.1| hypothetical protein Synpcc7942_2023 [Synechococcus elongatus PCC
           7942]
 gi|81561540|sp|Q5N0A8|RIMP_SYNP6 RecName: Full=Ribosome maturation factor rimP
 gi|123556488|sp|Q31LL6|RIMP_SYNE7 RecName: Full=Ribosome maturation factor rimP
 gi|56687040|dbj|BAD80262.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169713|gb|ABB58053.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 153

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 9/150 (6%)

Query: 25  ISSVIQPVIEEMSFRSVQ-ISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           I  + +P+ +++    VQ +    +   +L++ +    G+  L DCE +S++    LD  
Sbjct: 9   ILDLARPIADDLDLEVVQAVFHTNQSPPILRLDIRSRVGDTGLEDCERMSRSFELALDEA 68

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           NII   Y LE+SSPG+   +    DFL + G  V       + D  +  G ++G      
Sbjct: 69  NIIPDAYVLEISSPGLSDTLESDRDFLSFKGFPVQVTSRSPNDDTVEQQGTLLGRDADSV 128

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           +L K  R         + I+   +L  +LI
Sbjct: 129 YLNKRGR--------TVRIARSQVLEVKLI 150


>gi|308182570|ref|YP_003926697.1| Ribosome maturation factor rimP [Helicobacter pylori PeCan4]
 gi|308064755|gb|ADO06647.1| Ribosome maturation factor rimP [Helicobacter pylori PeCan4]
          Length = 146

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIESVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSVDFELEDHAIKSVEYKDL 137


>gi|268678891|ref|YP_003303322.1| hypothetical protein Sdel_0250 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616922|gb|ACZ11287.1| protein of unknown function DUF150 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 142

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +  +IE          ++ E    + +I++   +  + L  C E+S+ +SPI DVE 
Sbjct: 4   TEQLIKIIESCGVSLYDTEVVSEFDKKIFRIYITSKE-GINLDKCAEVSRILSPIFDVEP 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +EG Y  EVSSPGI+R +++   F    G  V  ++     +K+K IG + G +     
Sbjct: 63  PLEGEYLFEVSSPGIERKLLKPEHFSVSVGEKVKIKLK----NKEKFIGILEGFANNTLQ 118

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSAR 171
           +  E   +         I+ D +  AR
Sbjct: 119 VRVENEVK--------EIALDDIEKAR 137


>gi|210134596|ref|YP_002301035.1| hypothetical protein HPP12_0398 [Helicobacter pylori P12]
 gi|226706095|sp|B6JKX7|RIMP_HELP2 RecName: Full=Ribosome maturation factor rimP
 gi|210132564|gb|ACJ07555.1| hypothetical protein HPP12_0398 [Helicobacter pylori P12]
          Length = 146

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E  + +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEHNILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERVLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DWSADFELENHAIKSVEYKDL 137


>gi|88597399|ref|ZP_01100634.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88190460|gb|EAQ94434.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 147

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 17/150 (11%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERD------DGNMTLRDCEELSQAISPILD 81
           ++ + +E++       L  E    + +++V +          + L DC  LS+ +SPI D
Sbjct: 3   LEALCKEVNLELYDSELTSENGKKIYRVYVMKPLDEKGERRGVNLDDCARLSEILSPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE  + G Y LEVSS G++R + +   F +    +V        G+K+K+  KI+   + 
Sbjct: 63  VEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVKITT----GEKEKIEAKIISVEDE 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              LE  +  EK        I+F+ +  AR
Sbjct: 119 NITLENLENKEKT------TINFNDIKKAR 142


>gi|284044672|ref|YP_003395012.1| hypothetical protein Cwoe_3218 [Conexibacter woesei DSM 14684]
 gi|283948893|gb|ADB51637.1| protein of unknown function DUF150 [Conexibacter woesei DSM 14684]
          Length = 139

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 61/151 (40%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            I   I+  + +       +         +++F++  D  ++L  CE ++  ++      
Sbjct: 3   RIQEQIETTLSKTEPEVEVLLAEVLGGTTVRLFIDHPD-GVSLELCERVTHHLAG----- 56

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             I   Y LEVSSPG +RP+ + + F R+ G         + G +    G+++G +E+  
Sbjct: 57  --IRERYGLEVSSPGSERPLTKPAHFRRYLGQRARVRTRGAHGGQGSFTGELVGANESEV 114

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +              +AI +  +  + L+ 
Sbjct: 115 TI--------AAETGVVAIPYTEIKRSNLVP 137


>gi|227499285|ref|ZP_03929397.1| protein of hypothetical function DUF150 [Anaerococcus tetradius
           ATCC 35098]
 gi|227218636|gb|EEI83870.1| protein of hypothetical function DUF150 [Anaerococcus tetradius
           ATCC 35098]
          Length = 147

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 4/142 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  + +  IE M +  V I     KN  +  F   +   +T+ DCE+ S  +  
Sbjct: 1   MNLTNRLKEIFERDIESMGYELVDIEFKGGKNNKVLTFFIYNKEGITIEDCEKASAFLDT 60

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  +II+  Y LEVSS  + RP+    D  R    ++  ++       +  + K+   
Sbjct: 61  KLDEIDIIKDSYYLEVSSQDLSRPLKTDRDLERNKDELLKVKLKDG----EVFLAKLKEI 116

Query: 139 SETGFFLEKEKRGEKDMNELQI 160
            +  +  + E +  +++ + +I
Sbjct: 117 LDDSYIFDIEDKEAREVRKDEI 138


>gi|29829096|ref|NP_823730.1| hypothetical protein SAV_2554 [Streptomyces avermitilis MA-4680]
 gi|34223104|sp|Q82K50|RIMP_STRAW RecName: Full=Ribosome maturation factor rimP
 gi|29606202|dbj|BAC70265.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 169

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++         I +    +  +L++ V+ D+    L    ++S+A+S  LD
Sbjct: 7   ERLRELLEPLVGSQGLDLEGIEVESVGRKRVLRVVVDSDE-GADLDAIADVSRALSAKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + EG Y LEV +PG +R +     ++R    +V  ++         L+ +I+   +
Sbjct: 66  ETDAMGEGEYTLEVGTPGAERALTEHRHYVRAVDRLVRFQLTEGDE----LVARILTVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  LE    G K        ++F+ +  AR+ V
Sbjct: 122 AGLDLEV--PGVKGRKATTRRLAFEDIAKARVQV 153


>gi|228473622|ref|ZP_04058374.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228274994|gb|EEK13804.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 154

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 16/160 (10%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  +I   +EE +     I     K+ L+++ V+  D  + + DC  LS+AI  
Sbjct: 1   MNLKEKVKELIDKHLEE-NPSLFLIEYSIGKDNLIKVIVDG-DHGVNIDDCVALSRAIEH 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E      + LEVSS GI  P+ ++  + +  G  V  +   +       IG I   
Sbjct: 59  NLDREE---EDFSLEVSSSGIFAPLTQERQYTKNIGREVEVKTATA-----THIGVIQEV 110

Query: 139 SETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARL 172
           S+    L+   R  K   + +I       +  + +  A L
Sbjct: 111 SDGKVTLQVTSRQPKPQGKGKITVTEQFSLPIEEIKEATL 150


>gi|303326258|ref|ZP_07356701.1| transcription elongation factor [Desulfovibrio sp. 3_1_syn3]
 gi|302864174|gb|EFL87105.1| transcription elongation factor [Desulfovibrio sp. 3_1_syn3]
          Length = 156

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 51/127 (40%), Gaps = 17/127 (13%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDD-------------- 61
             +  L   +  + +PV+  +      + +++   + +++FV+                 
Sbjct: 23  MSENALKETVIRLAEPVVRSLGLVIWGVEVVQAGRMAVRLFVDVPSGAPESLQAADGEEN 82

Query: 62  ---GNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVA 118
               + ++  CEE+S+ +   L+VE+ +   Y LEVS+PG+ R          + G +V 
Sbjct: 83  EAPTSASIGQCEEISRHLGLALEVEDAVPSAYVLEVSTPGLTRLFFSLDQMRPYLGDMVE 142

Query: 119 CEIVLSS 125
             +    
Sbjct: 143 ARLHAPV 149


>gi|300772909|ref|ZP_07082778.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759080|gb|EFK55907.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 156

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 9/158 (5%)

Query: 17  GDMGLAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +   +  ++ + + +      V I +      +L+I V+  D  + + DC ++S+ 
Sbjct: 1   MKTKVEKRVEELVLEKIGDREDLFIVSIKMQSNG--VLEILVDG-DSGIAIDDCVKISRH 57

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +   L+ EN+IE  YRLEVSSPGID P++    + +  G  V  +        +K  GK+
Sbjct: 58  VGFHLEEENVIETAYRLEVSSPGIDSPLIMIRQYKKNIGRNVRVKNHEG----EKREGKL 113

Query: 136 MGTSETGFFLEKEKRGEKDMN-ELQIAISFDSLLSARL 172
           +  +E+   +E+ K+ +      ++  I F+ +   ++
Sbjct: 114 LNVTESNITIEESKKEKGKKAVPVESVIPFEQIKETKV 151


>gi|22536560|ref|NP_687411.1| hypothetical protein SAG0377 [Streptococcus agalactiae 2603V/R]
 gi|76786908|ref|YP_329097.1| hypothetical protein SAK_0451 [Streptococcus agalactiae A909]
 gi|76798054|ref|ZP_00780311.1| UPF0090 protein SP0552 (SP14.3) [Streptococcus agalactiae 18RS21]
 gi|77406351|ref|ZP_00783413.1| conserved hypotehtical protein [Streptococcus agalactiae H36B]
 gi|77408760|ref|ZP_00785490.1| conserved hypotehtical protein [Streptococcus agalactiae COH1]
 gi|77411665|ref|ZP_00788005.1| conserved hypotehtical protein [Streptococcus agalactiae CJB111]
 gi|77414448|ref|ZP_00790599.1| conserved hypotehtical protein [Streptococcus agalactiae 515]
 gi|91208361|sp|Q3K306|RIMP_STRA1 RecName: Full=Ribosome maturation factor rimP
 gi|22533394|gb|AAM99283.1|AE014208_23 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
 gi|76561965|gb|ABA44549.1| conserved hypothetical protein [Streptococcus agalactiae A909]
 gi|76586613|gb|EAO63114.1| UPF0090 protein SP0552 (SP14.3) [Streptococcus agalactiae 18RS21]
 gi|77159493|gb|EAO70653.1| conserved hypotehtical protein [Streptococcus agalactiae 515]
 gi|77162309|gb|EAO73280.1| conserved hypotehtical protein [Streptococcus agalactiae CJB111]
 gi|77172605|gb|EAO75744.1| conserved hypotehtical protein [Streptococcus agalactiae COH1]
 gi|77175020|gb|EAO77827.1| conserved hypotehtical protein [Streptococcus agalactiae H36B]
          Length = 127

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVR 105
             + +L I +++  G +T+ D  +L+  +SP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GGDYVLSILIDKP-GGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  S    +   G ++        ++   +         + I + 
Sbjct: 61  AEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDK----TRHKTVDIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 TVAKARLAV 125


>gi|325000942|ref|ZP_08122054.1| ribosome maturation protein RimP [Pseudonocardia sp. P1]
          Length = 209

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 14/167 (8%)

Query: 14  RIFGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDD----GNMTLRD 68
           R      LA  +  V++PV+ +       + +    +   +++ V+  +      + L D
Sbjct: 16  RSPDPEQLADQLRGVLEPVVTDAGLEIDAVEVRTAGRRHAVKLVVDLPEASTATGIDLDD 75

Query: 69  CEELSQAISPIL-DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
              LS+  +  L   E++IEG Y LEV+SPGIDRP+     + R    +    +      
Sbjct: 76  IARLSRTAAAELDPHEHLIEGSYTLEVTSPGIDRPLTTPRHWRRNFLRLARITLAGGDD- 134

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              L  +I    +    +    R + ++ E    I++D +  A++ V
Sbjct: 135 ---LEARIGRAGDDRVQVAVPGRKQPELRE----IAYDDVTHAQVQV 174


>gi|148243066|ref|YP_001228223.1| hypothetical protein SynRCC307_1967 [Synechococcus sp. RCC307]
 gi|147851376|emb|CAK28870.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 185

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 60/162 (37%), Gaps = 11/162 (6%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER--DDGNMTLRDCE 70
           PR      L   I ++     + + F    + L   +     I   R  D  ++ L DC 
Sbjct: 28  PRALAHPPLE-PIEALASATAQSLGFLMESVVLHSHRAPQALIVAVRKGDGSDVNLDDCA 86

Query: 71  ELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
             SQA    L+   ++ G Y LE++SPG+   + +  DF  + G  V      + G + +
Sbjct: 87  SFSQAFGEALETGELLTGAYVLEITSPGLGDVLQQDRDFRSFRGFPVCVRQRDAKGGEIQ 146

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             G ++G       L    R +         I    +L  RL
Sbjct: 147 REGTLLGRDADAVELNLRGRIQ--------RIPRSDVLEVRL 180


>gi|255530055|ref|YP_003090427.1| hypothetical protein Phep_0139 [Pedobacter heparinus DSM 2366]
 gi|255343039|gb|ACU02365.1| protein of unknown function DUF150 [Pedobacter heparinus DSM 2366]
          Length = 154

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 9/156 (5%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   ++ +++  I +      V++ +L      L I V+ D+  ++++DC  +S+ + 
Sbjct: 1   MQVEKRVTELVEEKISDRPELFLVEVKMLPNNK--LIIHVDGDE-GISIQDCAAISRHVG 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ EN IE  Y LEVSSPG+  P+  K  +L+  G  ++ ++       +   GK++ 
Sbjct: 58  FHLEEENTIEKAYNLEVSSPGVGEPLKLKRQYLKNVGRELSVKL----DGGEVKEGKLLA 113

Query: 138 TSETGFFLEKE-KRGEKDMNELQIAISFDSLLSARL 172
             E G  +E + K   K +  ++  I F+ ++  ++
Sbjct: 114 ADEQGITIEAKIKEKGKKVQLVETRIDFNKIIETKV 149


>gi|326335428|ref|ZP_08201615.1| hypothetical protein HMPREF9071_1081 [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692194|gb|EGD34146.1| hypothetical protein HMPREF9071_1081 [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 154

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 16/162 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  +I   ++E +     I     K  L+++ ++  D  + + DC  LS+AI  
Sbjct: 1   MNLKERVKYLIDKALKE-NPSLFLIEYSIGKGNLIKVIIDG-DNGVNIDDCVILSRAIEH 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E      + LEVSS GI  P+ ++  +++  G  V  E         K IG I   
Sbjct: 59  NLDREE---EDFSLEVSSCGIFAPLTQERQYIKNIGREVEIETTE-----TKYIGVIKEV 110

Query: 139 SETGFFLEKEKRGEKDMNE------LQIAISFDSLLSARLIV 174
            E    LE   R  K   +        I +  +++   +L +
Sbjct: 111 HEGKVSLEVTSRQPKANGKGKTTITETIVLPINNIKETKLKL 152


>gi|269792607|ref|YP_003317511.1| hypothetical protein Taci_0997 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100242|gb|ACZ19229.1| protein of unknown function DUF150 [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 150

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 14/150 (9%)

Query: 26  SSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILD--V 82
              I+ ++E++ +  V++ L+ +    ++++ ++  D  +   DCE +S+ +  +LD   
Sbjct: 10  KDRIRRLVEDLGYICVEVKLVRDLGGQVVRVTIDSPDAPIGHGDCEAVSRKVGELLDGEG 69

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E  ++G Y LEVSSPG +RP++   DF R+ G  +          K++         +  
Sbjct: 70  EGFLKGRYYLEVSSPGPNRPLLSLDDFRRFKGSKIRVSTGK---GKKRTYFIDDVFDDGM 126

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             L  E          ++   +  L + RL
Sbjct: 127 VRLVHEGE--------ELVCPWGDLKNPRL 148


>gi|315123740|ref|YP_004065744.1| YlxS [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315017462|gb|ADT65555.1| YlxS [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 140

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKEGGVNLDDCARLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + R   F +  G +V         +K+K   KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSRIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|293192165|ref|ZP_06609377.1| hypothetical protein HMPREF0970_01722 [Actinomyces odontolyticus
           F0309]
 gi|292820361|gb|EFF79353.1| hypothetical protein HMPREF0970_01722 [Actinomyces odontolyticus
           F0309]
          Length = 156

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 15/153 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERD--DGNMTLRDCEELSQAISP 78
            G +  ++ PV+ +       +     +   LL++ VE     G +      E+S+A+S 
Sbjct: 7   EGPLEELLTPVVAQSGLELDSVIRSRSDAMPLLRVIVEAPIGAGGIDSDTLAEVSRAVSK 66

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  + I+G Y LEVS+PG +R + +   ++R  G +V  ++         + G+++  
Sbjct: 67  ALDAADPIDGEYLLEVSTPGAERELTKVGHWMRQIGRLVRIKLRAGG----YVSGRVVAA 122

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            ET   ++ +             I +  +  AR
Sbjct: 123 DETSATIDVDGE--------TTIIDYQDMRKAR 147


>gi|317009046|gb|ADU79626.1| Ribosome maturation factor rimP [Helicobacter pylori India7]
          Length = 146

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E R  K +    +
Sbjct: 117 DLSADFELEDRAVKSVEYKDL 137


>gi|331698437|ref|YP_004334676.1| ribosome maturation factor rimP [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953126|gb|AEA26823.1| Ribosome maturation factor rimP [Pseudonocardia dioxanivorans
           CB1190]
          Length = 176

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 16/160 (10%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG--NMTLRDCEE 71
           +     L   +  V++P++    F   ++ +    +   +++ V+  D    + L D   
Sbjct: 1   MPTPDQLGRQLQDVLEPIVAGAGFELDELDVRATGRRHTVKVVVDSADEAAGVNLDDIAR 60

Query: 72  LSQAISPILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           LS+A S  LD  E++I G Y LEV+SPGIDRP+ +   + R    +V   +V       K
Sbjct: 61  LSRAASAELDQHEHLIGGSYTLEVTSPGIDRPLTQPRHWRRAYLRLVEVTLVEGG----K 116

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           L G+I    E    +  +            ++++  +  A
Sbjct: 117 LAGRIGRAGEDAVDVLVDGSVR--------SVAYADVAKA 148


>gi|207093098|ref|ZP_03240885.1| hypothetical protein HpylHP_09959 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 146

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAVKSVEYKDL 137


>gi|297202731|ref|ZP_06920128.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297148178|gb|EFH28865.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 165

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I++    +  +L++ V+  D    L    ++S+A+S  LD
Sbjct: 7   ERLRELLEPLVTSQGLDLEEIAVDSVGRKRVLRVVVDS-DTGADLDQIADVSRALSAKLD 65

Query: 82  VENIIE-GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +  G Y LEV +PG +R +     ++R    +V  ++         L+ +I+   +
Sbjct: 66  ESDAMGAGEYTLEVGTPGAERLLKEHRHYVRAVSRLVKFQLTEGGE----LVARILKVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  L+ E  G K        ++F  +  AR+ V
Sbjct: 122 DG--LDVEVPGVKGRKATARRLAFSEVDKARVQV 153


>gi|257066113|ref|YP_003152369.1| hypothetical protein Apre_0606 [Anaerococcus prevotii DSM 20548]
 gi|256797993|gb|ACV28648.1| protein of unknown function DUF150 [Anaerococcus prevotii DSM
           20548]
          Length = 147

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 4/142 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   +  + +  IE + +  V I    +KN  +  F   +   +T+ DCE++S  +  
Sbjct: 1   MDLTKRLKEIFEADIENLGYELVDIEFKGQKNNKILTFFIYNKDGITIEDCEKVSAFLDE 60

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD  +II+  Y LEVSS  + RP+    D  R    ++  ++       +  +GKI+  
Sbjct: 61  KLDEIDIIKDSYYLEVSSQDLSRPIKTDRDLERNKDELLKIKLKDG----EIFLGKIINI 116

Query: 139 SETGFFLEKEKRGEKDMNELQI 160
            E  +    E    K++ +  +
Sbjct: 117 GEDFYEFILEDENTKNIKKEDV 138


>gi|47095906|ref|ZP_00233509.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47015652|gb|EAL06582.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 101

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 4/102 (3%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  +D  + I  +Y LEVSSPG +RP+ ++ DF       V          ++  
Sbjct: 1   MSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMW 60

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            G ++    T   +    +  K   E    I  D +  ARL 
Sbjct: 61  EGTLVSYDGTTLVITITDKTRKITCE----IPKDKVAKARLA 98


>gi|86153804|ref|ZP_01072007.1| YlxS [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842765|gb|EAQ59977.1| YlxS [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 140

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKEGGVNLDDCARLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|298345266|ref|YP_003717953.1| hypothetical protein HMPREF0573_10140 [Mobiluncus curtisii ATCC
           43063]
 gi|315655686|ref|ZP_07908584.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|298235327|gb|ADI66459.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
 gi|315489750|gb|EFU79377.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
          Length = 197

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 17/170 (10%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD--GN 63
           + ++ +P    D  +   I  V+ PV+E       +I++   K+  ++ I ++  D   N
Sbjct: 25  ITTEAQPHTSTDPSVEA-IIQVVNPVVEAAGLYLEKIAVTGPKHQRVVAISLDLPDGVDN 83

Query: 64  MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVL 123
           +     E+ S+AI   LD  + + G Y LE+S+ G +  +       R  G  V      
Sbjct: 84  LGSAQLEDASRAIGAALDAADPLSGAYTLEISTLGAEHELTNLRLARRALGKDVEVRT-- 141

Query: 124 SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                Q   G +   +ETG  +  +               F+ + S R +
Sbjct: 142 ---GGQVRAGILTEVTETGLSVNDDGDVTVY--------PFEDIESVRTV 180


>gi|224438171|ref|ZP_03659106.1| hypothetical protein HcinC1_09335 [Helicobacter cinaedi CCUG 18818]
 gi|313144616|ref|ZP_07806809.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129647|gb|EFR47264.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 156

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 23/165 (13%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVER----------DDGNMTLRDC 69
           L+   +  I+ +   +S     I  L+E    +L+I + +          D   ++L+DC
Sbjct: 2   LSAQTTQKIERLAASLSLYIYDIDFLKEDERHILRISITKKAPMQNLSSKDSNAVSLQDC 61

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + LS+ +SP+LDVE+I   +Y LEVSSPG+DR + +   +    G +++ +++     K 
Sbjct: 62  QILSELLSPLLDVEHINMDNYHLEVSSPGLDRILKKPQHYAFSLGEMISLKLID----KS 117

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            L G +   ++T   L  +K          I I F S+  A++I 
Sbjct: 118 SLQGILENVNDTEIALLVDKEK--------INIPFSSIKKAKVIF 154


>gi|325067075|ref|ZP_08125748.1| ribosome maturation protein RimP [Actinomyces oris K20]
          Length = 172

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 10/171 (5%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG--NM 64
             + +PR   D  LA  ++ ++ P++ +       +      K  ++++FV+  DG  ++
Sbjct: 5   DQRKDPRQRAD-ALARSLADLLSPIVNDAGLHLESVETTRAGKYSVVRVFVDLLDGPGDL 63

Query: 65  TLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
            L     ++ AIS  LD  + ++G Y LEVS+PG +R +     F R  GH         
Sbjct: 64  DLDALGPVTAAISQALDEADPVKGQYTLEVSTPGAERELTTLRHFRRAVGHSARVRTADD 123

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEK-DMNELQIAISFDSLLSARLIV 174
                +L G +    E     +        +++ ++  I+   +  AR+++
Sbjct: 124 -----ELTGVVTAAEEDDEASDHNGGMVGIEVDGVERRIALGDITEARMVL 169


>gi|121613126|ref|YP_999862.1| hypothetical protein CJJ81176_0173 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167004833|ref|ZP_02270591.1| hypothetical protein Cjejjejuni_00785 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|166980215|sp|A1VXM1|RIMP_CAMJJ RecName: Full=Ribosome maturation factor rimP
 gi|87250144|gb|EAQ73102.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 140

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKEGGVNLDDCARLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|326333614|ref|ZP_08199852.1| hypothetical protein NBCG_05048 [Nocardioidaceae bacterium Broad-1]
 gi|325948595|gb|EGD40697.1| hypothetical protein NBCG_05048 [Nocardioidaceae bacterium Broad-1]
          Length = 166

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQA 75
               +A  I   +   ++ +      + +    K  +L+I V++ DG +T  +  E ++ 
Sbjct: 11  RKDAIASAIDKALADPLQALGLDIEAVEITPAGKRRILRIAVDK-DGGITHEEVTEATRE 69

Query: 76  ISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           ++ +LD  +++ E  Y LEV+SPG+DRP+     + R  G +V       S       G+
Sbjct: 70  VNRVLDESDVMGEQPYTLEVTSPGVDRPLTLPRHWRRNKGRLVKVTATDGS----TFTGR 125

Query: 135 IMGTSETGFFLEKEKR----GEKDMNELQIAISFDSLLS 169
           +  + E    LE   +       D+ +  + I F  +  
Sbjct: 126 VKESDEDRVSLEVSGKRREVAYADVKKALVQIEFKRIDE 164


>gi|86151421|ref|ZP_01069636.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85841768|gb|EAQ59015.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 140

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKEGGVNLDDCARLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V         +K+K   KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKFEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  A+
Sbjct: 119 ENKEKT------TINFNDIKKAK 135


>gi|313676537|ref|YP_004054533.1| hypothetical protein Ftrac_2447 [Marivirga tractuosa DSM 4126]
 gi|312943235|gb|ADR22425.1| protein of unknown function DUF150 [Marivirga tractuosa DSM 4126]
          Length = 157

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 78/157 (49%), Gaps = 7/157 (4%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           GL   I + +  +I E  +  V I +     L + + ++ D+  +++  C  +S+ ++  
Sbjct: 3   GLDEKIKAYLGEIITEPQYFIVDIVISGNDKLKIVVLLDGDE-GVSIDYCASVSRQLAHR 61

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           ++ + ++E  Y LEVSSPG+D P+     +L+  G  V  +        + + G+++   
Sbjct: 62  MEEDEVLEKAYVLEVSSPGLDHPLTNLRQYLKNIGRKVKVDTTDG----KAIRGELLEAK 117

Query: 140 ETGFFLE--KEKRGEKDMNELQIAISFDSLLSARLIV 174
           E    +    +++G+K +   +  +SF+++   +++V
Sbjct: 118 EDFILVNQEIKEKGKKKIKLEETKVSFENIDKTKVLV 154


>gi|259585703|sp|B8HG52|RIMP_ARTCA RecName: Full=Ribosome maturation factor rimP
          Length = 205

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 12/159 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDG---NMTLRDCEELSQAIS 77
           A  + ++++P +         + + +   + ++ + V+        ++L    ++S+ +S
Sbjct: 28  ADRLRALLEPSVLANRLYLEDVVINVAGSHRVVHVVVDLPQEETGGVSLDVIADISKVLS 87

Query: 78  PILDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             LD +       Y LEVSSPG+ RP+     + R  G +   +++      + + G+I 
Sbjct: 88  DALDNDPGADTRPYDLEVSSPGVGRPLTEPRHWHRAKGRIATVKVIQG----ENVTGRIQ 143

Query: 137 GTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
              + G  L  E   K+G K      + + FD + + ++
Sbjct: 144 SVDDGGVTLVPEIAVKKGMKPKQGDPVKLPFDRIRTGKV 182


>gi|57168691|ref|ZP_00367823.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|305432680|ref|ZP_07401841.1| conserved hypothetical protein [Campylobacter coli JV20]
 gi|57019972|gb|EAL56652.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|304444391|gb|EFM37043.1| conserved hypothetical protein [Campylobacter coli JV20]
          Length = 147

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 17/150 (11%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERD------DGNMTLRDCEELSQAISPILD 81
           ++ + +E++       L  E    + +++V +          + L DC  LS+ +SPI D
Sbjct: 3   LEALCKEVNLELYDSELTSENGKKIYRVYVMKPLDEKGERRGVNLDDCARLSEILSPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE  + G Y LEVSS G++R + +   F +    +V        G+K+K+  KI+   + 
Sbjct: 63  VEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVKITT----GEKEKIEAKIISVEDE 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              LE  +  EK        + F  +  AR
Sbjct: 119 NITLENLENQEKT------TLKFSDIKKAR 142


>gi|259585814|sp|B5Z6E8|RIMP_HELPG RecName: Full=Ribosome maturation factor rimP
          Length = 146

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|220912194|ref|YP_002487503.1| hypothetical protein Achl_1424 [Arthrobacter chlorophenolicus A6]
 gi|219859072|gb|ACL39414.1| protein of unknown function DUF150 [Arthrobacter chlorophenolicus
           A6]
          Length = 222

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 69/159 (43%), Gaps = 12/159 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDG---NMTLRDCEELSQAIS 77
           A  + ++++P +         + + +   + ++ + V+        ++L    ++S+ +S
Sbjct: 45  ADRLRALLEPSVLANRLYLEDVVINVAGSHRVVHVVVDLPQEETGGVSLDVIADISKVLS 104

Query: 78  PILDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             LD +       Y LEVSSPG+ RP+     + R  G +   +++      + + G+I 
Sbjct: 105 DALDNDPGADTRPYDLEVSSPGVGRPLTEPRHWHRAKGRIATVKVIQG----ENVTGRIQ 160

Query: 137 GTSETGFFLEKE---KRGEKDMNELQIAISFDSLLSARL 172
              + G  L  E   K+G K      + + FD + + ++
Sbjct: 161 SVDDGGVTLVPEIAVKKGMKPKQGDPVKLPFDRIRTGKV 199


>gi|109947687|ref|YP_664915.1| hypothetical protein Hac_1157 [Helicobacter acinonychis str.
           Sheeba]
 gi|122973267|sp|Q17WR0|RIMP_HELAH RecName: Full=Ribosome maturation factor rimP
 gi|109714908|emb|CAJ99916.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 146

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L +C+++S+ ISP+
Sbjct: 1   MTKRIEERIEGVIESLGYLLYDVSLIKESEQHILRVSLKNPNGAVSLDNCQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + ++  Y LEVSS G++R +     F    G  VA ++     +KQ     +   +
Sbjct: 61  LDVCDFLKDAYILEVSSMGLERTLKTPKHFKLSLGEKVAVKL----MNKQSFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSVDFELENHTIKSVEYKDL 137


>gi|311898672|dbj|BAJ31080.1| hypothetical protein KSE_53040 [Kitasatospora setae KM-6054]
          Length = 184

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 8/160 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                   + ++++P+  +      ++ +        +QI V+  DG + L    E S+ 
Sbjct: 1   MSTTPTDRLRALLEPLAADAGLDLEEVKVTQAGSRRQVQIDVD-ADGGVDLDAVAEFSRL 59

Query: 76  ISPILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           +S  LD   ++    Y LEV SPG +RP+     + R  G + A ++V  +     L  +
Sbjct: 60  VSRALDDSALMGETPYVLEVGSPGAERPLSEPRHWRRAVGRLAAVKLVDGAE----LTAR 115

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++ + E G  +E  +  +      +  + F  +  AR+ V
Sbjct: 116 VLESDEDGALVEV-QPVKGRGRPKERRLEFAEVARARVQV 154


>gi|319744371|gb|EFV96731.1| hypothetical protein containing DUF150 [Streptococcus agalactiae
           ATCC 13813]
          Length = 127

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVR 105
             + +L I +++  G +T+ D  +L+  +SP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GGDYVLSILIDKP-GGITVEDTVQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  S    +   G ++        ++   +         + I + 
Sbjct: 61  AEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDK----TRHKTVDIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 TVAKARLAV 125


>gi|148926309|ref|ZP_01809993.1| hypothetical protein Cj8486_0133 [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145844701|gb|EDK21806.1| hypothetical protein Cj8486_0133 [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 140

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAELSFYDDELVSENGRKIYRIYVQKEGGVNLDDCARLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V         +K+K+  KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKIEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|224419195|ref|ZP_03657201.1| hypothetical protein HcanM9_07971 [Helicobacter canadensis MIT
           98-5491]
 gi|253828125|ref|ZP_04871010.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313142699|ref|ZP_07804892.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253511531|gb|EES90190.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131730|gb|EFR49347.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 143

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 17/153 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M ++ D+ + IQ ++E    +   I  L+E  N +L+IFV +   +++L DC+E+S A+S
Sbjct: 1   MLISQDLQTKIQKLVESFDCKLYDIVTLKENDNQILRIFVTKK-SSVSLDDCQEISLALS 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDVE      Y LEVSSPGI+R +  K  +    G ++  +       K++  GK++ 
Sbjct: 60  PLLDVEIPESKSYFLEVSSPGIERTLKTKEHYCDAIGELLKVKTFA----KEEFKGKLLA 115

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            +     LE             I I  DS+  A
Sbjct: 116 VNSDNLELE-----------NNIIIPLDSIKKA 137


>gi|261839249|gb|ACX99014.1| hypothetical protein HPKB_0406 [Helicobacter pylori 52]
          Length = 146

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHATKSVEYKDL 137


>gi|283955315|ref|ZP_06372815.1| hypothetical protein C414_000440054 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793229|gb|EFC31998.1| hypothetical protein C414_000440054 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 147

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERD------DGNMTLRDCEELSQAISPILD 81
           ++ + +E +       L  E    + ++FV +          + L DC  LS+ +SPI D
Sbjct: 3   LEALCKEANLELYDSELTSENGKKIYRVFVMKPLDEKGQRVGVNLDDCARLSEILSPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           VE  + G Y LEVSSPG++R + +   F +  G +V         +K+K+  KIM   + 
Sbjct: 63  VEPPVNGEYFLEVSSPGLERKLGKIEHFAKSIGELVKITT----NEKEKIEAKIMSVEDE 118

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              LE  +  EK        + F  +  AR
Sbjct: 119 NIILENLENQEKT------TLKFSDIKKAR 142


>gi|152993548|ref|YP_001359269.1| hypothetical protein SUN_1969 [Sulfurovum sp. NBC37-1]
 gi|166980517|sp|A6QBQ3|RIMP_SULNB RecName: Full=Ribosome maturation factor rimP
 gi|151425409|dbj|BAF72912.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 142

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 8/134 (5%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   IS +    +E        I    E +  +   +    G + L  C  +S  +SP
Sbjct: 1   MNLEAQISKI----VEANGAALYDIETANEFDETIYRVLITKTGGVNLDLCATISNELSP 56

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LDV   + GHYRLEVSSPGI+R + +   F    G  V  +++       KL G +   
Sbjct: 57  FLDVHPPMNGHYRLEVSSPGIERKLSKPIHFQNAIGEKVKVKLL----GGDKLKGVLKAA 112

Query: 139 SETGFFLEKEKRGE 152
            + G  +E ++  E
Sbjct: 113 DDKGITVETKQGEE 126


>gi|317012240|gb|ADU82848.1| Ribosome maturation factor rimP [Helicobacter pylori Lithuania75]
          Length = 146

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G + L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVNLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERVLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|302554521|ref|ZP_07306863.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302472139|gb|EFL35232.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 169

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 9/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I++    +  +L++ V+  D    L    ++S+A+S  LD
Sbjct: 7   ERLRELLEPLVNSQGLDLDEIAVDSVGRKRVLRVVVDS-DTGADLDRIADVSRALSAKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + EG Y LEV +PG +RP+     ++R    +V  ++         L+ +I+   +
Sbjct: 66  ETDAMGEGEYTLEVGTPGAERPLTEHRHYVRATDRLVKFQLAEGDE----LVARILKVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G   + E  G K        I+FD ++ AR+ V
Sbjct: 122 EGV--DAEVPGVKGRKATARRIAFDDIVRARVQV 153


>gi|317180703|dbj|BAJ58489.1| hypothetical protein HPF32_0907 [Helicobacter pylori F32]
          Length = 146

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|87125355|ref|ZP_01081201.1| hypothetical protein RS9917_08055 [Synechococcus sp. RS9917]
 gi|86167124|gb|EAQ68385.1| hypothetical protein RS9917_08055 [Synechococcus sp. RS9917]
          Length = 155

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 2/143 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPILD 81
           D+++V     +   F    + ++   + + LQI + R +  +++L DC  LS  +   +D
Sbjct: 8   DLTAVAASTAQAHGFELADVQVMTHLQPMTLQIQIRRSNGDDVSLDDCARLSAPMGDAID 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
              +    Y LE+SSPGI   +    DF  +  + +        G +Q+  G ++  ++ 
Sbjct: 68  NAALPIEAYVLEISSPGIGDQLQTDRDFRTFRSYPIEVIYRDDEGGEQRQQGSLLERTDE 127

Query: 142 GFFLEKEKRGEKDMNELQIAISF 164
              L    R ++   +  IA+  
Sbjct: 128 HIHLNVRGRIKRISRQAVIAVQL 150


>gi|317179205|dbj|BAJ56993.1| hypothetical protein HPF30_0896 [Helicobacter pylori F30]
          Length = 146

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E R  K +    +
Sbjct: 117 DLSADFELEDRAIKSVEYKDL 137


>gi|301167103|emb|CBW26682.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 172

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 68/167 (40%), Gaps = 22/167 (13%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL-RDCEELSQAIS 77
            G+      +   + EE+      +  L+  +  L++F+   +    +  +C +L +A++
Sbjct: 8   TGVEKKFYELCSRLCEELGLEIYDLDYLKGSH-TLRVFIMNPETKTAVLEECSKLDRALT 66

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV------------LSS 125
           P ++ E  +     LEVSSPG+ R + +   F       +   I              S 
Sbjct: 67  PYIEEEEWMPSELTLEVSSPGMFRHLSKIEHFEMSLEEDIQFTIRARLTQDLFPGIPKSL 126

Query: 126 GDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             ++K++GK++  +E    +          ++ ++ + ++ +  A L
Sbjct: 127 QGERKILGKLLKVTEETITVL--------SHDYELTLKYEDIKKANL 165


>gi|217031630|ref|ZP_03437135.1| hypothetical protein HPB128_21g188 [Helicobacter pylori B128]
 gi|298736659|ref|YP_003729185.1| hypothetical protein HPB8_1164 [Helicobacter pylori B8]
 gi|216946830|gb|EEC25426.1| hypothetical protein HPB128_21g188 [Helicobacter pylori B128]
 gi|298355849|emb|CBI66721.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 146

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYTLEVSSMGLERTLKTPKHFKLSLGEKVEVKLI----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K++    +
Sbjct: 117 DLSADFELEDHAIKNVEYKDL 137


>gi|257055489|ref|YP_003133321.1| hypothetical protein Svir_14540 [Saccharomonospora viridis DSM
           43017]
 gi|256585361|gb|ACU96494.1| uncharacterized conserved protein [Saccharomonospora viridis DSM
           43017]
          Length = 179

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 13/155 (8%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
               LA  +  ++   +    F    + + +     L   V   D  + L    E+S+A+
Sbjct: 1   MPNELASRLEPLVAEAVGAAGFDLDALDVQQAGRRKLVKVVVDGDEGVELDKVAEISRAV 60

Query: 77  SPILDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           S +LD  + +I G Y LEV+SPG+DRP+ +   + R    +V              IG++
Sbjct: 61  SAVLDQHDHLIAGAYTLEVTSPGLDRPLTKPRHWRRSRNRLVRVTPKEGPA----YIGRV 116

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               E    +  +             + +  +  A
Sbjct: 117 GAAGEDSVRILVDGEIRD--------LRYADVRKA 143


>gi|113954072|ref|YP_731567.1| hypothetical protein sync_2370 [Synechococcus sp. CC9311]
 gi|123327605|sp|Q0I7K5|RIMP_SYNS3 RecName: Full=Ribosome maturation factor rimP
 gi|113881423|gb|ABI46381.1| DUF150 [Synechococcus sp. CC9311]
          Length = 157

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 60/145 (41%), Gaps = 2/145 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPILD 81
           D+  +      +  F    + +L   + + +QI + R    ++TL DC   S  +   L+
Sbjct: 10  DLKDLASATAVDHGFELADLQVLAHMQPMTVQIQIRRSSGDDVTLDDCAAFSAPMGEALE 69

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
              ++   Y LE+SSPGI   +    DF  +  + V        G +QK  G ++  +E 
Sbjct: 70  NSAVLNEAYVLEISSPGIGDHLQSDRDFQTFRRYPVDVIHRDPDGAEQKHSGTLLERTEN 129

Query: 142 GFFLEKEKRGEKDMNELQIAISFDS 166
              +    R ++   +  +++   +
Sbjct: 130 HLKISIHGRIKQIPRDSILSVELTN 154


>gi|188527211|ref|YP_001909898.1| hypothetical protein HPSH_02090 [Helicobacter pylori Shi470]
 gi|226701161|sp|B2USN6|RIMP_HELPS RecName: Full=Ribosome maturation factor rimP
 gi|188143451|gb|ACD47868.1| hypothetical protein HPSH_02090 [Helicobacter pylori Shi470]
 gi|261837834|gb|ACX97600.1| hypothetical protein KHP_0389 [Helicobacter pylori 51]
 gi|297379622|gb|ADI34509.1| UPF0090 protein [Helicobacter pylori v225d]
 gi|308061753|gb|ADO03641.1| Ribosome maturation factor rimP [Helicobacter pylori Cuz20]
 gi|308063263|gb|ADO05150.1| Ribosome maturation factor rimP [Helicobacter pylori Sat464]
          Length = 146

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|15611447|ref|NP_223098.1| hypothetical protein jhp0379 [Helicobacter pylori J99]
 gi|6648012|sp|Q9ZM44|RIMP_HELPJ RecName: Full=Ribosome maturation factor rimP
 gi|4154909|gb|AAD05958.1| putative [Helicobacter pylori J99]
          Length = 146

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLI----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E +    K +    +
Sbjct: 117 DLSADFELDNHAIKSVEYKDL 137


>gi|255033850|ref|YP_003084471.1| hypothetical protein Dfer_0034 [Dyadobacter fermentans DSM 18053]
 gi|254946606|gb|ACT91306.1| protein of unknown function DUF150 [Dyadobacter fermentans DSM
           18053]
          Length = 160

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 70/158 (44%), Gaps = 11/158 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   +  ++ P++E+     V I++   K +  + I V+ D+  +T++ C  +S+ ++
Sbjct: 1   MTVKEHLEVLLAPLLEDGDCFLVDIAIKPSKLSQKVTILVDSDE-GITIQQCTSISRRLA 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+   +    Y LEVSSPG+D+P++    + +  G  +   +       + L G +  
Sbjct: 60  KQLEELEVFTQAYTLEVSSPGLDQPLLLPRQYKKNVGRNLKITLKSG----EILQGTLTD 115

Query: 138 TSETGFFLEKEKRGEKDMNELQ-----IAISFDSLLSA 170
             ++   ++     +K    +        I+ D +  A
Sbjct: 116 AGDSDITIQLPAPKKKPKTPVDEASLVRTIALDDISKA 153


>gi|153952308|ref|YP_001397397.1| hypothetical protein JJD26997_0151 [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|166979754|sp|A7H1L7|RIMP_CAMJD RecName: Full=Ribosome maturation factor rimP
 gi|152939754|gb|ABS44495.1| protein Tmden_0678 [Campylobacter jejuni subsp. doylei 269.97]
          Length = 140

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC  LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAELSFYDDELVSENGKKIYRIYVQKEGGVNLDDCARLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +V         +K+K+  KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELVKITT----NEKEKIEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|117928725|ref|YP_873276.1| hypothetical protein Acel_1518 [Acidothermus cellulolyticus 11B]
 gi|259585656|sp|A0LV30|RIMP_ACIC1 RecName: Full=Ribosome maturation factor rimP
 gi|117649188|gb|ABK53290.1| protein of unknown function DUF150 [Acidothermus cellulolyticus
           11B]
          Length = 170

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 17/154 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++ PV+         ++LL+ +    L+I V++ DG + L +    SQAIS  L
Sbjct: 7   AQRLAELLAPVVAGQGLDLEGVTLLDHRTSAHLRIVVDK-DGGVQLDEIAAASQAISHFL 65

Query: 81  DVEN-----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D +      I    Y LEVSSPGIDRP+V    + R  G +V  ++         ++ ++
Sbjct: 66  DNDAEADAIIGPRSYTLEVSSPGIDRPLVEPRHWRRAIGRLVRVQLPDLGP----VVARV 121

Query: 136 MGTSETGFFL------EKEKRGEKDMNELQIAIS 163
              +     L        +    +   E  +AI+
Sbjct: 122 QDVTGDQVRLGIEWQYTDDGACVRQYEERTVAIA 155


>gi|332673248|gb|AEE70065.1| conserved hypothetical protein [Helicobacter pylori 83]
          Length = 146

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|307637097|gb|ADN79547.1| transcription termination protein [Helicobacter pylori 908]
 gi|325995688|gb|ADZ51093.1| ribosome maturation factor [Helicobacter pylori 2018]
 gi|325997284|gb|ADZ49492.1| hypothetical protein hp2017_0406 [Helicobacter pylori 2017]
          Length = 146

 Score = 78.9 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYTLEVSSMGLERTLKTPKHFKLSLGEKVEVKLI----NKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|323127912|gb|ADX25209.1| hypothetical protein SDE12394_08865 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 127

 Score = 78.9 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVR 105
             + +L I V++ +G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GSDYVLSILVDK-EGGITVEDTSDLTDIISPLLDTITPDPFPDQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  V   +  +    +   G ++        ++   +         + I + 
Sbjct: 61  VESLKAAVGSYVNVSLYKAIDKVKVFQGDLLAFDGETLTIDYLDK----TRHKTVDIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 TVAKARLAV 125


>gi|291276415|ref|YP_003516187.1| hypothetical protein HMU01790 [Helicobacter mustelae 12198]
 gi|290963609|emb|CBG39441.1| Putative hypothetical protein [Helicobacter mustelae 12198]
          Length = 147

 Score = 78.9 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           ++ ++   I+ +I+ + +    I  L+E    +L+I +   D  +TL  C+ +S+A+SP+
Sbjct: 2   ISQELQERIENLIQSLGYTLYDIVFLKENQSDILRISITHADQPITLDACQMVSEALSPL 61

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV    +  Y LEVSSPG++R +     F       V   +     DK +    ++   
Sbjct: 62  LDVALSDQKSYFLEVSSPGVERILKTPRHFALSLHTRVRVRL----EDKSEFEAVLLEAK 117

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           E       +   ++          + +L   + I+
Sbjct: 118 EEHATFLLDDGVKQSH-------PYAALKKVKTIL 145


>gi|114777566|ref|ZP_01452547.1| hypothetical protein SPV1_07661 [Mariprofundus ferrooxydans PV-1]
 gi|114552037|gb|EAU54554.1| hypothetical protein SPV1_07661 [Mariprofundus ferrooxydans PV-1]
          Length = 158

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 7/150 (4%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +   I S+++P+++E+    ++ISL    +  L   V    G +     E +S+ ++  L
Sbjct: 1   MESKIESLLRPIVDELGVEIIKISLGGGGHNPLLKVVVDKAGGVDSGMLERISRGLALQL 60

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG-TS 139
           DVE++I+  +RLEV++PG+D P+   +DF R+ G  +       S       G+ +G  S
Sbjct: 61  DVEDLIKSAFRLEVTTPGLDWPLTTNADFERYRGEWLKVMFADGS----SQEGRNLGPVS 116

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLS 169
           +  F L  E  G K + + +  I    +  
Sbjct: 117 DHAFMLLVE--GSKRVKDQEQVIEMADVNK 144


>gi|108562826|ref|YP_627142.1| hypothetical protein HPAG1_0401 [Helicobacter pylori HPAG1]
 gi|122386653|sp|Q1CUA4|RIMP_HELPH RecName: Full=Ribosome maturation factor rimP
 gi|107836599|gb|ABF84468.1| hypothetical protein HPAG1_0401 [Helicobacter pylori HPAG1]
          Length = 146

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLI----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVGYKDL 137


>gi|269956008|ref|YP_003325797.1| hypothetical protein Xcel_1208 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304689|gb|ACZ30239.1| protein of unknown function DUF150 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 192

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 5/154 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTL---RDCEELSQ 74
              A  +  V+ P ++        +S        ++++ V+  +  +        + +S+
Sbjct: 14  SATAEAVRRVVAPAVDAEGLFLESVSATRAGARSVVRVTVDLPEDAVGSLGSDALDAVSR 73

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           AIS  LD ++++ G Y LEVS+PG  RP+     F R    +V   +V     + +L   
Sbjct: 74  AISAALDADDVVRGVYVLEVSTPGTSRPLTELRHFKRARTRLVTLSLVDGGEAEGRLQDV 133

Query: 135 IMGTSETGFFLEKEKRGEKDM-NELQIAISFDSL 167
           + GT      LE   R       + ++ +    +
Sbjct: 134 VAGTDGDELVLEDGGRFPVATVRQGRVEVELKRV 167


>gi|315586392|gb|ADU40773.1| conserved hypothetical protein [Helicobacter pylori 35A]
 gi|317181743|dbj|BAJ59527.1| hypothetical protein HPF57_0453 [Helicobacter pylori F57]
          Length = 146

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL+ E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIRENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|217033305|ref|ZP_03438736.1| hypothetical protein HP9810_9g58 [Helicobacter pylori 98-10]
 gi|216944246|gb|EEC23671.1| hypothetical protein HP9810_9g58 [Helicobacter pylori 98-10]
          Length = 146

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLIKENEQHILRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y  EVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYIFEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|195977580|ref|YP_002122824.1| hypothetical protein Sez_0439 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|259586200|sp|B4U1E4|RIMP_STREM RecName: Full=Ribosome maturation factor rimP
 gi|195974285|gb|ACG61811.1| hypothetical protein Sez_0439 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 127

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVR 105
             + +L I V++    +T+ D  EL++ ISP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GSDYVLSILVDKA-SGITVEDTAELTELISPLLDTISPDPFPDQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  +    +   G ++        ++   +         + I + 
Sbjct: 61  AESLKAAVGSYINVSLYRAIDKVKVFQGDLVAFDGDILTIDYLDK----TRHKTVEIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 AVAKARLAV 125


>gi|312892422|ref|ZP_07751917.1| protein of unknown function DUF150 [Mucilaginibacter paludis DSM
           18603]
 gi|311295206|gb|EFQ72380.1| protein of unknown function DUF150 [Mucilaginibacter paludis DSM
           18603]
          Length = 161

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 72/163 (44%), Gaps = 16/163 (9%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   ++ +++  I +      V + +L  + L++ +  +     + + DC  +S+ + 
Sbjct: 1   MNIEKRVALLVEEKIADRPELFLVDVKMLPNRKLIILVDGD---AGIGIADCAAISRFVG 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ +N+IE  Y LEVSSPGID P+     + +  G  ++ ++       Q   GK++ 
Sbjct: 58  FKLEEDNVIEEAYNLEVSSPGIDSPLTLIRQYTKNIGRDLSVKMTDG----QLREGKLLS 113

Query: 138 TSETGFFLEKE--------KRGEKDMNELQIAISFDSLLSARL 172
            +E    ++++            K    ++  I    +  A++
Sbjct: 114 LAEDAIVIDEKIKAVRKAPGEKGKKAEVVESTIPLTEIAEAKV 156


>gi|86149726|ref|ZP_01067956.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|205356511|ref|ZP_03223275.1| hypothetical protein Cj8421_0138 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|85839994|gb|EAQ57253.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|205345698|gb|EDZ32337.1| hypothetical protein Cj8421_0138 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 140

 Score = 78.5 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           ++ + +E         L+ E    +     + +G + L DC +LS+ +SPI DVE  + G
Sbjct: 3   LEALCKEAELSFYDDELVSENGKKIYRIYVQKEGGVNLDDCAKLSEILSPIFDVEPPVNG 62

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
            Y LEVSSPG++R + +   F +  G +          +K+K+  KI+   +    LE  
Sbjct: 63  EYFLEVSSPGLERKLSKIEHFAKSIGELAKITT----NEKEKIEAKIIAVDDENITLENL 118

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
           +  EK        I+F+ +  AR
Sbjct: 119 ENKEKT------TINFNDIKKAR 135


>gi|42526618|ref|NP_971716.1| hypothetical protein TDE1108 [Treponema denticola ATCC 35405]
 gi|51316704|sp|Q73NP4|RIMP_TREDE RecName: Full=Ribosome maturation factor rimP
 gi|41816811|gb|AAS11597.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
 gi|325473160|gb|EGC76356.1| hypothetical protein HMPREF9353_02549 [Treponema denticola F0402]
          Length = 148

 Score = 78.5 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 63/143 (44%), Gaps = 14/143 (9%)

Query: 30  QPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           +P++E + F+ V +++L +K+   ++  + + +  + ++DC  + + + P +    I   
Sbjct: 16  EPLVEGLGFKLVDLNVLHKKDVWQVKAVI-KSEKGVGIKDCTSVHRTLQPRI-EALIGSQ 73

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
              +EVSSPGI+R + R  +F  + G          +  +    G I   +  G  L  +
Sbjct: 74  DVTMEVSSPGINRLVKRAVEFYAFVGEEAQIWDNSITDWR---HGIIKEVNSEGLVLNSD 130

Query: 149 KRGEKDMNELQIAISFDSLLSAR 171
            +         I I +  +  AR
Sbjct: 131 NQD--------IQIPYQDIKKAR 145


>gi|332665271|ref|YP_004448059.1| ribosome maturation factor rimP [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334085|gb|AEE51186.1| Ribosome maturation factor rimP [Haliscomenobacter hydrossis DSM
           1100]
          Length = 158

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSF-RSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I +++Q   +E  F     I + +E    L++FV+  D  M    C+ +S+ +   
Sbjct: 2   ITEKIEALLQEKYQEPEFADCFTIEIKQEGGNRLEVFVDS-DSGMQFEKCQRISRFLEAH 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD    +   Y LEVSSPGI+RP+     +LR  G      +       +   G +   +
Sbjct: 61  LDTNGWLGEVYTLEVSSPGIERPLKFARQYLRNIGRTFEVRLSAG----ETKTGVLKAVN 116

Query: 140 ETGFFLEKEKR----GEKDMNELQIAISFDSLLSA 170
                LE+E +     +     +Q  I F+ +  A
Sbjct: 117 PESIVLEEEIKWKEGKKNMKGTVQTVIPFEHIAKA 151


>gi|15645660|ref|NP_207836.1| hypothetical protein HP1046 [Helicobacter pylori 26695]
 gi|6647978|sp|O25687|RIMP_HELPY RecName: Full=Ribosome maturation factor rimP
 gi|2314193|gb|AAD08091.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 146

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I  VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIGGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|312130304|ref|YP_003997644.1| hypothetical protein Lbys_1583 [Leadbetterella byssophila DSM
           17132]
 gi|311906850|gb|ADQ17291.1| protein of unknown function DUF150 [Leadbetterella byssophila DSM
           17132]
          Length = 151

 Score = 78.1 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L   +  +++ +I +  +  V+I++ + K    + IF++  D  +T+  C E+S+ + 
Sbjct: 1   MSLKDTVIKLVEDLIRDTDYYVVEIAVSDSKIRRKVSIFLDS-DAGITIDQCTEVSRKLG 59

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L +E +I+  + LEVSSPG D P+  +  +++  G  +    V  S     + GK++ 
Sbjct: 60  --LQLEEVIDEAFTLEVSSPGADSPLKFERQYVKNIGRSLKILKVDGSE----IKGKLVS 113

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                  +E E +  K +    +A+S D +  A++I
Sbjct: 114 VENGSITIETEAK--KKVKSETVALSLDEIKEAKVI 147


>gi|317498936|ref|ZP_07957219.1| hypothetical protein HMPREF0996_02203 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893769|gb|EFV15968.1| hypothetical protein HMPREF0996_02203 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 95

 Score = 78.1 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 2/87 (2%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +      ++ P+IE  +F  V +  ++   N  L+++ ++ +G + + DC  +S+++  
Sbjct: 6   DIETKTEELVLPIIEANNFELVDVEYVKEGANWYLRVYADK-EGGIAIDDCVLISRSLEE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVR 105
            LD E+ IE  Y LEVSSPG+ RP+ +
Sbjct: 65  KLDAEDFIEDAYILEVSSPGLGRPLKK 91


>gi|308184203|ref|YP_003928336.1| Ribosome maturation factor rimP [Helicobacter pylori SJM180]
 gi|308060123|gb|ADO02019.1| Ribosome maturation factor rimP [Helicobacter pylori SJM180]
          Length = 146

 Score = 78.1 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKIPKHFKLSLGEKVEVKLT----NKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DWSADFELENHAIKSVEYKDL 137


>gi|322412489|gb|EFY03397.1| hypothetical protein SDD27957_08990 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 127

 Score = 78.1 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVSSPGIDRPMVR 105
             + +L I V++ +G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GSDYVLSILVDK-EGGITVEDTSDLTDIISPLLDTITPDPFPDQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  V   +  +    +   G ++        ++   +         + I + 
Sbjct: 61  VESLKSAVGSYVNVSLYKAIDKVKVFQGDLLAFDGETLTIDYLDK----TRHKTVDIPYQ 116

Query: 166 SLLSARLIV 174
           ++  ARL V
Sbjct: 117 TVAKARLAV 125


>gi|317010677|gb|ADU84424.1| Ribosome maturation factor rimP [Helicobacter pylori SouthAfrica7]
          Length = 146

 Score = 78.1 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E  + +L++ ++  +G ++L +C+++S+ ISP+
Sbjct: 1   MTKRIEERIEGVIESLGYLLYDVSLIKENEHNILRVSLKNPNGAVSLDNCQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + ++  Y LEVSS G++R +     F    G  V  ++V    +K+     +   +
Sbjct: 61  LDVCDFLKDAYILEVSSMGLERVLKTPKHFKLSLGEKVGVKLV----NKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHTIKSVEYKDL 137


>gi|134102375|ref|YP_001108036.1| hypothetical protein SACE_5928 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291004240|ref|ZP_06562213.1| hypothetical protein SeryN2_06952 [Saccharopolyspora erythraea NRRL
           2338]
 gi|167016718|sp|A4FM36|RIMP_SACEN RecName: Full=Ribosome maturation factor rimP
 gi|133914998|emb|CAM05111.1| protein of unknown function DUF150 [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 185

 Score = 77.7 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +A  +  V+   +    F   ++ + +     L   V   +  + L +  E+S+A+S +L
Sbjct: 9   VAARLEPVVAEAVSAAGFDLEELDVQQAGRRRLVKVVVDAEEGVGLDEISEISRAVSKVL 68

Query: 81  D-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D  E+++ G Y LEV+SPG+DRP+ R   + R    +V   +   S     L+ ++    
Sbjct: 69  DAHEHVLAGSYTLEVTSPGVDRPLTRPRHWRRARYRLVRVRLADGSD----LVVRVGEAD 124

Query: 140 ETGFFLEKEKR----GEKDMNELQIAISFDS 166
           + G  +  +        +D+    + + F  
Sbjct: 125 DEGVVVLADGEIRTLAYRDVERAVVEVEFQQ 155


>gi|296269041|ref|YP_003651673.1| hypothetical protein Tbis_1058 [Thermobispora bispora DSM 43833]
 gi|296091828|gb|ADG87780.1| protein of unknown function DUF150 [Thermobispora bispora DSM
           43833]
          Length = 171

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 16/152 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++ PV+E        +++       +   V   DG +T+ +  ++S+++S  LD  
Sbjct: 9   RLVELLGPVVEAKGLDLEDVTITSAGRRRIVRVVVDRDGGVTVDEIADVSRSVSDRLDEV 68

Query: 84  NIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +++    Y LEV+SPG+DRP+  +  + R  G +V   +         + G+I   +ET 
Sbjct: 69  DVLGDAPYVLEVTSPGVDRPLTEQRHWRRARGLLVKAVLRDGG----TVEGRITDVTETE 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             L           +    I    L+  R+ +
Sbjct: 125 VEL-----------DGTRRIPLADLVKGRVQL 145


>gi|325676663|ref|ZP_08156338.1| hypothetical protein HMPREF0724_14121 [Rhodococcus equi ATCC 33707]
 gi|325552518|gb|EGD22205.1| hypothetical protein HMPREF0724_14121 [Rhodococcus equi ATCC 33707]
          Length = 189

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 63/150 (42%), Gaps = 12/150 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  ++   I    +    +++    ++  +++ V+  D  + L +   LS  IS + D
Sbjct: 7   ERVVELLADPIGREGYDLEDVTITLAGRHSSVRVMVDS-DSGLELDEVARLSHVISDVFD 65

Query: 82  V-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              +  E  Y LEV+SPGIDRP+     + R  G  V  E+       + + G++   ++
Sbjct: 66  AASDFGESPYTLEVTSPGIDRPLTEGRHWRRAQGRKVLVELAE-----ESVTGRVGRLTD 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            G  L  + +G   +  ++       +  A
Sbjct: 121 GGVDLVVKAKGGPVVRRVE----LADVKKA 146


>gi|254779091|ref|YP_003057196.1| hypothetical protein HELPY_0404 [Helicobacter pylori B38]
 gi|254001002|emb|CAX28946.1| Conserved hypothetical protein [Helicobacter pylori B38]
          Length = 146

 Score = 77.7 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +      +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVK----PTNKESFQAILKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DWSADFELEDHAIKSVEYKDL 137


>gi|210634028|ref|ZP_03297946.1| hypothetical protein COLSTE_01864 [Collinsella stercoris DSM 13279]
 gi|210158972|gb|EEA89943.1| hypothetical protein COLSTE_01864 [Collinsella stercoris DSM 13279]
          Length = 164

 Score = 77.7 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 10/159 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELS 73
                L  DI   ++          V + ++   K   +++ +++ +   + L +    +
Sbjct: 1   MVKSKLEQDIIDALEAQAPLHGVDVVDVEVVGATKAPCIRVRLDKLEGDPINLDEVTAQT 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
             +S  ++  + I G Y LEVSSPG+ RP+ R SDF R+ G  V          ++   G
Sbjct: 61  AWVSDTVEALDPIAGAYTLEVSSPGMKRPLRRPSDFARFAGEEVELTTTAM-EGRRSYKG 119

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            I  T++T   ++ E        E  + ISFD +    L
Sbjct: 120 VIAETTDTAVTIQPEG-------EEAVTISFDDVKKCTL 151


>gi|114566430|ref|YP_753584.1| hypothetical protein Swol_0896 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|122318498|sp|Q0AYJ1|RIMP_SYNWW RecName: Full=Ribosome maturation factor rimP
 gi|114337365|gb|ABI68213.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 139

 Score = 77.7 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 4/123 (3%)

Query: 41  VQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGI 99
           V I   +E     L++F+++ D  + L  C + ++AI    D + I   +  LEVSSPG+
Sbjct: 14  VNIEYRKENKEQFLRVFIDK-DNGVDLDMCSQANRAIKESFDEQEIPYDY--LEVSSPGL 70

Query: 100 DRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQ 159
           DR + ++ D+ R++G+ V  +   S    Q++ G ++G       +E E    K   E+ 
Sbjct: 71  DRVLKKERDWERFSGYRVRIKTRKSFPGPQRITGILLGFDSENIAVELEGELLKVPREMI 130

Query: 160 IAI 162
             I
Sbjct: 131 TII 133


>gi|284036132|ref|YP_003386062.1| hypothetical protein Slin_1213 [Spirosoma linguale DSM 74]
 gi|283815425|gb|ADB37263.1| protein of unknown function DUF150 [Spirosoma linguale DSM 74]
          Length = 170

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 19/171 (11%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFV-ERDDGNMTLRDCEELSQAIS 77
           M     I+ ++QP ++   F  V I +   +   L++ +    D  +T+ DC ++S+ + 
Sbjct: 1   MDDKAKITELLQPYLKNDLFYIVDIQVAGRQGGRLKVTILLDSDAGITIDDCADISRRLG 60

Query: 78  PILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             +D  N      + LE+SSPG+D P+     F+R  G  +   +           G + 
Sbjct: 61  GQMDEMNFFGDSPFTLEISSPGVDYPLTFSRQFVRNVGRQLIVTLTDGVI----RKGVLE 116

Query: 137 GTSETGFFLEKEKRGEKDMNE-------------LQIAISFDSLLSARLIV 174
             +E    L+ E   +    +                 I F  +  A++ V
Sbjct: 117 SVAEDHIVLDIEAEKKSKSKKKKDADVSPDLQPVGPTPILFGQIKKAQVEV 167


>gi|259016313|sp|Q7U8L5|RIMP_SYNPX RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 2/141 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISPILD 81
           ++ ++   V  +  F    I LL     + L++ + R +G ++ + DC   S  +   L+
Sbjct: 8   ELETLATSVAADQGFELCGIQLLTHLAPMTLEVHIRRSNGVDVNMDDCAGFSGTLGEALE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
              ++   Y LE+SSPGI   +    DF  + G  V          +Q+L G ++   E 
Sbjct: 68  SAQLLTEAYVLEISSPGIGETLSSDRDFQTFRGFPVEVVHRDRDDTEQRLEGLLLERDED 127

Query: 142 GFFLEKEKRGEKDMNELQIAI 162
              +    R ++   +  +++
Sbjct: 128 TLQINIRGRIKRLPRDHVLSV 148


>gi|207109808|ref|ZP_03243970.1| hypothetical protein HpylH_11664 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 143

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 71/145 (48%), Gaps = 12/145 (8%)

Query: 28  VIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENII 86
           +++ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+LDV + I
Sbjct: 5   LLEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPLLDVCDFI 64

Query: 87  EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE 146
           +  Y LEVSS G++R +     F    G  V  ++     +K+     +   ++     E
Sbjct: 65  QDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDANDLSADFE 120

Query: 147 KEKRGEKDMNELQIAISFDSLLSAR 171
            E    K       ++ +  L   +
Sbjct: 121 LEDHAVK-------SVEYKDLKKVK 138


>gi|87301302|ref|ZP_01084143.1| hypothetical protein WH5701_15491 [Synechococcus sp. WH 5701]
 gi|87284270|gb|EAQ76223.1| hypothetical protein WH5701_15491 [Synechococcus sp. WH 5701]
          Length = 156

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 10/155 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD-GNMTLRDCEELSQAISP 78
           L   +  ++ P+ E        + +   +  L L I +   D  ++ L +C   S  +  
Sbjct: 5   LIPHLERLVTPLAEASGLALQGVEIQAHRLPLTLVIQIRHADGRDINLDECAAFSGVLGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +++   ++   Y LEVSSPGI   ++   DF  + G  VA       G +    G ++  
Sbjct: 65  VVEASELMTQAYVLEVSSPGIGEELLDDRDFHSFRGFPVAVRFRDGKGLETTREGLLLER 124

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
            E    L    R           I    ++S RL+
Sbjct: 125 DEEHLQLNLHGRIS--------RIPRPDVISVRLV 151


>gi|290957022|ref|YP_003488204.1| hypothetical protein SCAB_25381 [Streptomyces scabiei 87.22]
 gi|260646548|emb|CBG69645.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 169

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 9/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I++    +  +L++ V+ D+    L    ++S+A+S  LD
Sbjct: 7   ERLRELLEPLVRSQGLDLEEIAVDSVGRKRVLRVVVDSDE-GADLDAVADVSRALSAKLD 65

Query: 82  VENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +    Y LEV +PG +R +     + R    +V   +         LI +I+   +
Sbjct: 66  ETDAMGQSEYTLEVGTPGAERALTEHRHYRRAVDRLVKFTLREDGE----LIARILTVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  LE    G K        ++FD +  AR+ V
Sbjct: 122 EGLDLEV--PGVKGRRATSRRLAFDEIDRARVQV 153


>gi|148240412|ref|YP_001225799.1| hypothetical protein SynWH7803_2076 [Synechococcus sp. WH 7803]
 gi|166980273|sp|A5GNI7|RIMP_SYNPW RecName: Full=Ribosome maturation factor rimP
 gi|147848951|emb|CAK24502.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
          Length = 155

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 2/143 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPILD 81
           DI+ V         F  V+I +L   + + +Q+ + R D  +++L DC   S  +   L+
Sbjct: 8   DITPVAASTAAAHGFELVEIQILTHLQPMTVQVQIRRTDGSDVSLDDCAGFSGPMGEALE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + ++   Y LE+SSPGI   +    DF  +  + V        G +Q+  G ++  +  
Sbjct: 68  SQALLTEAYVLEISSPGIGEQLQSDRDFQTFRSYPVEVLYRDDEGREQRQQGSLLERNAD 127

Query: 142 GFFLEKEKRGEKDMNELQIAISF 164
              +    R ++      I++  
Sbjct: 128 HVQVNVRGRIKRIARASVISVQL 150


>gi|317177213|dbj|BAJ55002.1| hypothetical protein HPF16_0405 [Helicobacter pylori F16]
          Length = 146

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ +IE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKKIEEKIEGMIESLGYLLYDVSLIKENEQHVLRVSLKNPNGAVSLDICQQVSEIISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  ++     +K+     +   +
Sbjct: 61  LDVCDFIQDAYILEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|125624586|ref|YP_001033069.1| hypothetical protein llmg_1797 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166980233|sp|A2RM41|RIMP_LACLM RecName: Full=Ribosome maturation factor rimP
 gi|124493394|emb|CAL98368.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071377|gb|ADJ60777.1| hypothetical protein LLNZ_09255 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 157

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +   I+P I    F    +   +   +++L I V++ +G + + +  ELS+ ISP
Sbjct: 3   DVVKIVEDFIKPHI-PKPFELFAVEWEKFGGDMMLSILVDK-EGGIEIDETAELSELISP 60

Query: 79  ILDVENIIE---GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LD  +        Y LEV+SPG +RP+ +   F    G  +  ++     ++++  G +
Sbjct: 61  LLDTISPDPFPTEGYLLEVASPGAERPLRKAEHFAGAVGEYIFVKLYQKINNEKEFTGDL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++   +         I I   ++  A+ +V
Sbjct: 121 VSFDGETLVVDVLDK----TRHKNIEIPLSAVAKAQTMV 155


>gi|317013844|gb|ADU81280.1| Ribosome maturation factor rimP [Helicobacter pylori Gambia94/24]
          Length = 146

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   I+ VIE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+
Sbjct: 1   MTKRIEEKIEGVIESLGYLLYDVSLVKENEQHVLRVSLKNPNGAVSLDICQQVSEVISPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDV + I+  Y LEVSS G++R +     F    G  V  +++    +K+     +   +
Sbjct: 61  LDVCDFIQDAYTLEVSSMGLERTLKIPKHFKLSLGEKVEVKLI----NKESFQAVLKDAN 116

Query: 140 ETGFFLEKEKRGEKDMNELQI 160
           +     E E    K +    +
Sbjct: 117 DLSADFELEDHAIKSVEYKDL 137


>gi|116511572|ref|YP_808788.1| hypothetical protein LACR_0813 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|122940261|sp|Q030K6|RIMP_LACLS RecName: Full=Ribosome maturation factor rimP
 gi|116107226|gb|ABJ72366.1| hypothetical protein LACR_0813 [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 157

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +   I+P I    F    +   +   +++L I V++ +G + + +  ELS+ ISP
Sbjct: 3   DVVKIVEDFIKPHI-PKPFELFAVEWEKFGGDMMLSILVDK-EGGIEIDETAELSELISP 60

Query: 79  ILDVENIIE---GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LD  +        Y LEV+SPG +RP+ +   F    G  +  ++     ++++  G +
Sbjct: 61  LLDTISPDPFPTEGYLLEVASPGAERPLRKAEHFAGAVGEYIFVKLYQKINNEKEFTGDL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++   +         I I   ++  A+ +V
Sbjct: 121 VSFDGENLVVDVLDK----TRHKNIEIPLSAVAKAQTMV 155


>gi|167751251|ref|ZP_02423378.1| hypothetical protein EUBSIR_02237 [Eubacterium siraeum DSM 15702]
 gi|167655758|gb|EDR99887.1| hypothetical protein EUBSIR_02237 [Eubacterium siraeum DSM 15702]
          Length = 163

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 61/148 (41%), Gaps = 3/148 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +       + P+IE   +    +   +E     L++  ++ DG +   +CEE+++ ++  
Sbjct: 15  VERITEQKVLPIIERYGYELWDVIFEKEGAMWYLKVLFDKADGGIDDVECEEITEPLNKA 74

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           +D  + I+     EV SPG+DR + +   F++  G  +   +   +G      G +    
Sbjct: 75  VDTLSCIDLVDVFEVGSPGLDRQLRKPFHFVKMKGEKIKVTVRDENGKTAYYSGVLGDYD 134

Query: 140 ET--GFFLEKEKRGEKDMNELQIAISFD 165
           E    F ++ +    K        I+ D
Sbjct: 135 ENSGEFTVQTDDGEMKFNAAKCRRIALD 162


>gi|291532988|emb|CBL06101.1| Uncharacterized protein conserved in bacteria [Megamonas
           hypermegale ART12/1]
          Length = 112

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 50/89 (56%), Gaps = 1/89 (1%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
               +   +  + + ++    +  V +  ++E++  L++++++ +G + L DC+E+S  +
Sbjct: 1   MANRVEEAVEKIAEEILANTDYELVDVEYVKERDWFLRVYIDK-EGGIGLDDCQEVSGLL 59

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVR 105
              L+  NII   Y LEVSSPG+DR + +
Sbjct: 60  DEKLEELNIINDRYILEVSSPGLDRALKK 88


>gi|291296310|ref|YP_003507708.1| hypothetical protein Mrub_1931 [Meiothermus ruber DSM 1279]
 gi|290471269|gb|ADD28688.1| protein of unknown function DUF150 [Meiothermus ruber DSM 1279]
          Length = 159

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 7/158 (4%)

Query: 11  YEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDG-NMTLRDC 69
            EP      G A   S V + V+  + +  ++  L   KN +L + +ER D   +++ D 
Sbjct: 1   MEPEHPLQAGGAPQWSQVAESVLAPLGYEVLEAGLKSGKNPVLLVRIERKDEVPISIADL 60

Query: 70  EELSQAISPILD-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDK 128
           E  ++A+S  LD +E ++   Y L+V SPG DRP+     F R+ G  V           
Sbjct: 61  ERANRALSAHLDTLEALLPARYLLQVESPGADRPLFTARHFERFAGLKVRVRSPQG---- 116

Query: 129 QKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
               G+I            EK   + +       +   
Sbjct: 117 -NFTGRIGAVRGDMVEFLLEKDETRSLQLGTFKATLAE 153


>gi|307331527|ref|ZP_07610640.1| protein of unknown function DUF150 [Streptomyces violaceusniger Tu
           4113]
 gi|306882844|gb|EFN13917.1| protein of unknown function DUF150 [Streptomyces violaceusniger Tu
           4113]
          Length = 174

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 7/151 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  +++P++        ++ +       +   V   D  + L  C ELS+ IS  LD 
Sbjct: 7   ERLRGLLEPLVSARDLDLEEVEVTPAGRRRVLRVVVDSDDGVQLDTCAELSRDISQTLDD 66

Query: 83  ENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + +    Y LEV+SPG +RP+     + R  G ++   +   +     L+ +I+   + 
Sbjct: 67  TDAMGQVAYVLEVTSPGAERPLTEPRHYRRATGRLMRARLTDDAE----LVARIVSVDDE 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G  LE    G K        ++F+ +  AR+
Sbjct: 123 GLDLEV--PGVKGRKPTARRLAFEEISKARV 151


>gi|296272022|ref|YP_003654653.1| hypothetical protein Arnit_0482 [Arcobacter nitrofigilis DSM 7299]
 gi|296096197|gb|ADG92147.1| protein of unknown function DUF150 [Arcobacter nitrofigilis DSM
           7299]
          Length = 142

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 14/147 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   I+  ++        I   +E +  + +I++   D  ++L  C E+S+ +SPILD  
Sbjct: 3   LEESIEMTVKGCGVELYDILTTKENDRDIFRIYITSKD-GVSLDKCAEISRLVSPILDTN 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             + G Y LEVSSPGI+R + + + ++   G  V  +                   +   
Sbjct: 62  EPMYGKYNLEVSSPGIERKLKKTAHYISSIGENVKVKDFD------------KNVLKGEL 109

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
               E   +    E +  IS+D + SA
Sbjct: 110 IFADENEIKVKTQEGEETISYDKISSA 136


>gi|15672745|ref|NP_266919.1| hypothetical protein L173151 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|34223137|sp|Q9CHG8|RIMP_LACLA RecName: Full=Ribosome maturation factor rimP
 gi|12723681|gb|AAK04861.1|AE006310_3 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406314|gb|ADZ63385.1| Ribosome maturation factor [Lactococcus lactis subsp. lactis CV56]
          Length = 157

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +   I+P I    F    +   +   +++L I V++ +G + + +  ELS+ ISP
Sbjct: 3   DVVKIVEDFIRPHI-PQPFELFAVEWEKFGGDMMLSILVDK-EGGIEIDETAELSEIISP 60

Query: 79  ILDVENIIE---GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LD  +        Y LEV+SPG +RP+ +   F    G  +  ++     +++++ G +
Sbjct: 61  LLDTISPDPFPTEGYLLEVASPGAERPLRKAEHFAGAVGEYIFVKLYQKINNEKEITGDL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++   +         I I   ++  A+ +V
Sbjct: 121 VSFDGETLVVDVLDK----TRHKNIEIPLSAVAKAQTMV 155


>gi|94985334|ref|YP_604698.1| hypothetical protein Dgeo_1233 [Deinococcus geothermalis DSM 11300]
 gi|259585747|sp|Q1IZ05|RIMP_DEIGD RecName: Full=Ribosome maturation factor rimP
 gi|94555615|gb|ABF45529.1| protein of unknown function DUF150 [Deinococcus geothermalis DSM
           11300]
          Length = 155

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 7/129 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDV 82
           + ++ + V++ + +  + + +    +  ++ I ++R D+  +T+ D E  S+A+    D 
Sbjct: 12  LRTLAEGVLQPLGYEVLDVQVQNPGRRPIVVIRMDRLDEQPVTVEDLETASRAVGAEFDR 71

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I G YRLE+ SPG  RP+ R   + R  G           GD       I       
Sbjct: 72  VDPIAGEYRLELESPGAKRPLTRARHYERMLGLKARVR-----GDGHSFTAPIKAVDGEQ 126

Query: 143 FFLEKEKRG 151
              +     
Sbjct: 127 VTFDVGGED 135


>gi|226306116|ref|YP_002766076.1| hypothetical protein RER_26290 [Rhodococcus erythropolis PR4]
 gi|259586185|sp|C0ZYA2|RIMP_RHOE4 RecName: Full=Ribosome maturation factor rimP
 gi|226185233|dbj|BAH33337.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 206

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 12/150 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +I  ++    +    + +    K+  ++I V+  D  + L    E+S+ +S + D
Sbjct: 7   ERVIELISELVHAQGYDVEDVVVTSAGKHSAVRIMVDS-DAGIELDAAAEISRLVSELFD 65

Query: 82  -VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            +E I E  Y LEV+SPGIDRP+  +  + R  G     ++       + ++G+I   ++
Sbjct: 66  SLEEIGETPYTLEVTSPGIDRPLTLERHWRRARGRKARIDLA-----GETVVGRIGTLND 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               +    RG   + E    I+   +  A
Sbjct: 121 DSVAVVIGGRGGLTVRE----IALGDVQKA 146


>gi|193214184|ref|YP_001995383.1| hypothetical protein Ctha_0465 [Chloroherpeton thalassium ATCC
           35110]
 gi|259585751|sp|B3QUN0|RIMP_CHLT3 RecName: Full=Ribosome maturation factor rimP
 gi|193087661|gb|ACF12936.1| protein of unknown function DUF150 [Chloroherpeton thalassium ATCC
           35110]
          Length = 182

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 21/183 (11%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVER 59
           M+S   L   +  ++  +M ++        P   E     V I +   K + ++++F + 
Sbjct: 2   MDSRLKLIQDWLLQLLAEMTVSD-------PDGNEHEVFLVDIEVHSNKTIDIIEVFADT 54

Query: 60  DDGNMTLRDCEELSQAISPILDVEN----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
            D  +++ +C+ LS+ IS  LD       ++  H++L VSSPG+ RP+     + +  G 
Sbjct: 55  -DSGISVENCKFLSKHISAELDASEEMQALLPRHFKLVVSSPGLSRPLTMNRQYKKNIGR 113

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSET---GFFLEKEKRGE-----KDMNELQIAISFDSL 167
           ++      + G+ + + G+ +   E       L+  K  +     K      + I F  +
Sbjct: 114 LMQVTYQNADGEIKTIDGRFISLEEEAEASITLDITKIQKSKPNAKPKPPELVTIPFSQI 173

Query: 168 LSA 170
             A
Sbjct: 174 QKA 176


>gi|229491457|ref|ZP_04385281.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229321742|gb|EEN87539.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 206

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 65/150 (43%), Gaps = 12/150 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +I  ++    +    + +    K+  ++I V+  D  + L    E+S+ +S + D
Sbjct: 7   ERVIELISELVHAQGYDVEDVVVTSAGKHSAVRIMVDS-DAGIELDAAAEISRLVSELFD 65

Query: 82  -VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
            +E I E  Y LEV+SPGIDRP+     + R  G     ++       + ++G+I   ++
Sbjct: 66  TLEEIGETPYTLEVTSPGIDRPLTLDRHWRRARGRKARIDLA-----GETVVGRIGTLND 120

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               +    RG   + E    I+   +  A
Sbjct: 121 DSVAVVIGGRGGLTVRE----IALGDVQKA 146


>gi|297626629|ref|YP_003688392.1| hypothetical protein PFREUD_14670 [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922394|emb|CBL56966.1| Hypothetical protein PFREUD_14670 [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 157

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 19/166 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVE---RDDGNMTLRDCEELSQAIS 77
              +  ++ P++ E      ++ ++   K+ +L+I ++    +     L    + ++AIS
Sbjct: 3   ESTLIDLLDPIVAEHGLEIDELKIVRAGKHSVLRISLDGDGSEGHGPDLDQIADATRAIS 62

Query: 78  PILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
             LD  E      Y LEVSS G+  P+ R + + R    +V          ++   G+I 
Sbjct: 63  HALDEAEAPSNSPYTLEVSSRGVSAPLTRPAHWRRNATRLVEVT---PLEGEK-YTGRIT 118

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
              E G  LE + +           + F  +  A  +V  E+ R S
Sbjct: 119 SADEDGAELEIDGQPRH--------VDFGQVRRA--VVQIEMNRKS 154


>gi|312865482|ref|ZP_07725709.1| conserved hypothetical protein [Streptococcus downei F0415]
 gi|311099000|gb|EFQ57217.1| conserved hypothetical protein [Streptococcus downei F0415]
          Length = 134

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 8/136 (5%)

Query: 42  QISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPG 98
            +   +   + +L I V++ +  +T+ D  EL+  ISP+LD    +     Y LE+SSPG
Sbjct: 2   DVEYEKLGADYVLSILVDKPE-GITVDDTAELTDIISPLLDTIKPDPFPSQYMLEISSPG 60

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNEL 158
           ++RP+          G  +   +  +    +   G ++        LE   +  K     
Sbjct: 61  LERPLKTAESLEAAIGSYINVSLYKAIDKVKVFEGDLLDFDGQTLTLEYLDKTRKK---- 116

Query: 159 QIAISFDSLLSARLIV 174
           Q+ I + ++  AR+ V
Sbjct: 117 QVEIPYSTVAKARMAV 132


>gi|328479977|gb|EGF49014.1| hypothetical protein AAULR_12702 [Lactobacillus rhamnosus MTCC
           5462]
          Length = 119

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 7/121 (5%)

Query: 55  IFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112
           +++++  G +TL +C  +S+A+S  LD    + I   Y LEVSSPG +RP+ R++D+ + 
Sbjct: 1   VYIDKS-GGITLDECVLVSEALSEQLDAINPDPIPQQYFLEVSSPGAERPLKRETDYEQA 59

Query: 113 NGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            G  +   +      K+   G +         L  + +  K        I    + SARL
Sbjct: 60  IGDYIHVSLFKKLDGKKVFEGTLKDLKPDQLTLTVKDKSRKFDQ----VIDRKLIASARL 115

Query: 173 I 173
            
Sbjct: 116 A 116


>gi|313681591|ref|YP_004059329.1| hypothetical protein Sulku_0462 [Sulfuricurvum kujiense DSM 16994]
 gi|313154451|gb|ADR33129.1| protein of unknown function DUF150 [Sulfuricurvum kujiense DSM
           16994]
          Length = 143

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 15/153 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L  DI  +++ +           ++  E    +        G ++L  C E +  ISP
Sbjct: 1   MSLESDIKKMVESI----GLSLYDTAVFNENENTIFRVSVTAPGGVSLDQCVEATHLISP 56

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDV   + G YRLEVSSPGI+R +     F +  G  V    V    +K+K  G+++  
Sbjct: 57  LLDVTPPVGGEYRLEVSSPGIERKLKTLDHFAQSVGEKVVFSTV----NKEKFDGEVVSV 112

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                 +       K        + F S+  A+
Sbjct: 113 ENEEITI-------KTKEGETHTVPFRSISKAK 138


>gi|328950380|ref|YP_004367715.1| Ribosome maturation factor rimP [Marinithermus hydrothermalis DSM
           14884]
 gi|328450704|gb|AEB11605.1| Ribosome maturation factor rimP [Marinithermus hydrothermalis DSM
           14884]
          Length = 147

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 7/145 (4%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISPILD 81
           ++ +VI+ V+  + +  ++++L    K  +L + +ER D+  ++  D E  SQ IS  LD
Sbjct: 2   ELWNVIEAVVRPLGYEVLEVTLKGGGKTRVLTVRLERADEQPISFADLERASQVISLELD 61

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I G YRLEV SPG DRP++    F R+ G     +         +  G+I+     
Sbjct: 62  RLDPIPGAYRLEVESPGPDRPLITARHFERFMGLKAKVQSDEG-----RFTGRIVRVEGD 116

Query: 142 GFFLEKEKRGEKDMNELQIAISFDS 166
                     E+ +       +   
Sbjct: 117 VVTFALATGEERALKLGTFKANLAE 141


>gi|281491259|ref|YP_003353239.1| hypothetical protein LLKF_0783 [Lactococcus lactis subsp. lactis
           KF147]
 gi|281375000|gb|ADA64518.1| Hypothetical protein LLKF_0783 [Lactococcus lactis subsp. lactis
           KF147]
          Length = 157

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
            +   +   I+P I    F    +   +   +++L I V++ +G + + +  ELS+ ISP
Sbjct: 3   DVVKIVEDFIRPHI-PQPFELFAVEWEKFGGDMMLSILVDK-EGGIEIDETAELSEIISP 60

Query: 79  ILDVENIIE---GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +LD  +        Y LEV+SPG +RP+ +   F    G  +  ++     +++++ G +
Sbjct: 61  LLDTISPDPFPTEGYLLEVASPGAERPLRKAEHFAGAVGEYIFVKLYQKINNEKEITGDL 120

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           +        ++   +         I I   ++  A+ +V
Sbjct: 121 VSFDGETLVVDVLDK----TRYKNIEIPLSAVAKAQTMV 155


>gi|312194981|ref|YP_004015042.1| hypothetical protein FraEuI1c_1099 [Frankia sp. EuI1c]
 gi|311226317|gb|ADP79172.1| protein of unknown function DUF150 [Frankia sp. EuI1c]
          Length = 277

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
            +I   +   +    F    +SL       +L++ V+RDD  + L    + S+ IS +LD
Sbjct: 22  AEIRDRLAEALARAGFDLDDLSLSRAGSRSVLRVAVDRDD-GIDLDAVADASRLISDLLD 80

Query: 82  VENI--IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             +   + G Y LEV+SPG+DRP+     + R  G +V    V  +     ++G+++G  
Sbjct: 81  QVDEGGLAGAYVLEVTSPGVDRPLTEPRHWRRARGRLVEARRVDGT----VVLGRVLGAD 136

Query: 140 ETGFFLEKEKRGEKDMNELQIAIS---FDSLLSA 170
           + G  L       +    ++  I    F  +  A
Sbjct: 137 DEGVDLAVAAGPVRRGRPVKTKIERLRFADVARA 170


>gi|169630218|ref|YP_001703867.1| hypothetical protein MAB_3136c [Mycobacterium abscessus ATCC 19977]
 gi|259585791|sp|B1MD92|RIMP_MYCA9 RecName: Full=Ribosome maturation factor rimP
 gi|169242185|emb|CAM63213.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 189

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 59/153 (38%), Gaps = 10/153 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLL----EEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
              +  ++ P           + +       +   + + V+  D  + L     LS+  S
Sbjct: 17  DDQVLELLAPEFSRSGVEIESVVVSDGGVAGRPSRIAVVVDS-DTPVDLDAVAGLSRTAS 75

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            +LD  +     Y LE+++PG+DRP+   + F R +  +    +         L+G+I  
Sbjct: 76  ALLDEADTGWQAYELEITTPGVDRPLTTVAHFRRAHLRLAQIRLTNGED----LLGRIGI 131

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           T + G  +   ++  K        ++F  + SA
Sbjct: 132 THDDGVQVVL-RKPIKGTGWTVRDLAFSDIESA 163


>gi|33865135|ref|NP_896694.1| hypothetical protein SYNW0601 [Synechococcus sp. WH 8102]
 gi|33638819|emb|CAE07116.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 166

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 10/147 (6%)

Query: 28  VIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVENI 85
           +   V  +  F    I LL     + L++ + R +G ++ + DC   S  +   L+   +
Sbjct: 23  LATSVAADQGFELCGIQLLTHLAPMTLEVHIRRSNGVDVNMDDCAGFSGTLGEALESAQL 82

Query: 86  IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL 145
           +   Y LE+SSPGI   +    DF  + G  V          +Q+L G ++   E    +
Sbjct: 83  LTEAYVLEISSPGIGETLSSDRDFQTFRGFPVEVVHRDRDDTEQRLEGLLLERDEDTLQI 142

Query: 146 EKEKRGEKDMNELQIAISFDSLLSARL 172
               R +         +  D +LS RL
Sbjct: 143 NIRGRIK--------RLPRDHVLSVRL 161


>gi|308176798|ref|YP_003916204.1| hypothetical protein AARI_10150 [Arthrobacter arilaitensis Re117]
 gi|307744261|emb|CBT75233.1| conserved hypothetical protein [Arthrobacter arilaitensis Re117]
          Length = 188

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 17/171 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDD--GNMTLRDCEELSQAISP 78
           A  +++++   +E       ++SL    K +++QI V++ D   ++ L +  E++  IS 
Sbjct: 12  AQRLTALLSKEVESHGLLLEEVSLRPSGKQMIVQIIVDKADGHESLNLDELGEVTTTISN 71

Query: 79  ILDVENIIEG--HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            LD + +      Y LEVSSPG+ RP+  +  ++R    +V   +   +    KL G+++
Sbjct: 72  ALDKDAVYASAAPYELEVSSPGLSRPLTAQRHWIRAINRMVKISLADGT----KLRGRLL 127

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAIS----FDSLLSA----RLIVTDELL 179
             +++   + + +   K   ++++       F+++  A     L   D LL
Sbjct: 128 EVNDSDVLVAEHREPAKKGMKVKVLDPATHAFENIRKAVVDPELNFDDALL 178


>gi|294631731|ref|ZP_06710291.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292835064|gb|EFF93413.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 169

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I++    +  +L++ V+  D    L    ++S+A+S  LD
Sbjct: 7   ERLRELLEPLVASQGLDLEEIAVDSVGRKRVLRVVVDS-DTGADLDQIADVSRALSAKLD 65

Query: 82  VENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + + EG Y LEV +PG +R +     ++R  G +   ++         L+ +I+   +
Sbjct: 66  ESDAMGEGEYTLEVGTPGAERLLTEHRHYVRATGRLAKFQLAEGGE----LVARILRVDD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  LE      +     ++A     ++ AR+ V
Sbjct: 122 EGLDLEVPGVKGRKATTRRVAFP--DVVRARVQV 153


>gi|126697020|ref|YP_001091906.1| hypothetical protein P9301_16821 [Prochlorococcus marinus str. MIT
           9301]
 gi|166980189|sp|A3PEY0|RIMP_PROM0 RecName: Full=Ribosome maturation factor rimP
 gi|126544063|gb|ABO18305.1| DUF150 [Prochlorococcus marinus str. MIT 9301]
          Length = 155

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 66/153 (43%), Gaps = 10/153 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPI 79
              +  +++ V  +       +++   +  ++++I +++ +  +++L DC   +   S  
Sbjct: 6   KSKLEKLLENVANKQDLEIYSLNIQTNQNPIVIEIIIKKTNGNDVSLDDCALFNTPASDE 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           ++  N++   Y LE+SS G+   +  + DF  + G  V  E+   +   + L G +   S
Sbjct: 66  IEKSNLLNCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSKIKFLNGLLYEKS 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +  + R +K        I FD +L   L
Sbjct: 126 NDYLAINIKGRIKK--------IPFDEVLKISL 150


>gi|329936657|ref|ZP_08286364.1| hypothetical protein SGM_1856 [Streptomyces griseoaurantiacus M045]
 gi|329303887|gb|EGG47770.1| hypothetical protein SGM_1856 [Streptomyces griseoaurantiacus M045]
          Length = 179

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 7/153 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  +++P++        +I +       +   V   D    L    ++S+A+S  LD 
Sbjct: 7   ERLRELLEPLVTSQGLDLEEIDVASVGRRRVLRVVVDSDTGADLDRVADVSRALSAKLDE 66

Query: 83  ENIIE-GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + +  G Y LEV +PG +R +     ++R    +V  ++         L+ +I+G  E 
Sbjct: 67  TDAMGAGEYTLEVGTPGAERALTEHRHYVRALDRLVRFQLREGGE----LVARILGVDEE 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G  LE    G K        ++F  +  AR+ V
Sbjct: 123 GLDLEV--PGVKGRRPTTRRLAFPDVDKARVQV 153


>gi|227875843|ref|ZP_03993969.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|269977479|ref|ZP_06184451.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
 gi|306819124|ref|ZP_07452838.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307700024|ref|ZP_07637073.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
 gi|227843591|gb|EEJ53774.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|269934395|gb|EEZ90957.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
 gi|304648100|gb|EFM45411.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307614785|gb|EFN94005.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
          Length = 178

 Score = 75.4 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 16/158 (10%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD--DGNMTLRDCEELSQAI 76
            +A ++S ++ P + ++     ++ +   KN   ++IF++     G +     E  SQ I
Sbjct: 12  DIAAEVSQLLAPTVTQLGLFLEKVCVKGSKNSRQVEIFLDLPAGSGEIGFERLEAASQEI 71

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S ++D  + +EG Y LEVS+ G +  +     F+R  G             ++++ G+I+
Sbjct: 72  SRLMDSADPVEGKYNLEVSTLGAEHALDNPRLFVRAVGRDAEIT----VAGQKRV-GRIL 126

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
              ET F  E++ + E         ISF +L SAR +V
Sbjct: 127 AAGETDFTWEEDGKQE--------TISFSALQSARTVV 156


>gi|284929276|ref|YP_003421798.1| hypothetical protein UCYN_07210 [cyanobacterium UCYN-A]
 gi|284809720|gb|ADB95417.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
          Length = 125

 Score = 75.4 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 1/112 (0%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   I  +  PVI+EM    V +     K   +L+  +     N++L DC ++S+ +  I
Sbjct: 5   LIQQIIDLTTPVIKEMGIDIVNVVFHTNKCPSILRFDISNPAENISLDDCAKVSRTLESI 64

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           LD   II   Y LEVSSPGI + +  + DF  + G  +         +K+++
Sbjct: 65  LDETTIIPHAYVLEVSSPGISQILNSERDFTTFQGFAIGIMTSPPYLNKERM 116


>gi|154148890|ref|YP_001407189.1| hypothetical protein CHAB381_1677 [Campylobacter hominis ATCC
           BAA-381]
 gi|259585737|sp|A7I3U8|RIMP_CAMHC RecName: Full=Ribosome maturation factor rimP
 gi|153804899|gb|ABS51906.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
          Length = 140

 Score = 75.0 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 13/144 (9%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           +  +  E   +     L+ E +  + ++++ + +  + L DCE LS+ +SPILDVE    
Sbjct: 4   LNALCSECGVKFYADELISENSRQIYRVYITKKN-GVNLDDCEALSRLLSPILDVEPPTS 62

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G + LEVSSPG++R +   S+F    G +V   +       +K+ G+I+   +    L  
Sbjct: 63  GAFTLEVSSPGLERKLTTPSNFENSLGELVKITLKNG----EKISGEILSFKDEILKL-- 116

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
                K     +I+++F+ +  A+
Sbjct: 117 -----KTAENNEISVNFNEIKKAK 135


>gi|332878282|ref|ZP_08446008.1| hypothetical protein HMPREF9074_01747 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683733|gb|EGJ56604.1| hypothetical protein HMPREF9074_01747 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 155

 Score = 75.0 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 17/162 (10%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     + +++   +E   +     + +  +  + + I  +     + + DC  LS+A+ 
Sbjct: 1   MNFKDQVKALVDKALEATPTLFLTDLKVSADNAITVVIDGDN---GVGIDDCIALSRAVE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E      + LEV+S G   P V    + +  G  V           +   G + G
Sbjct: 58  APLDAEGA---DFSLEVTSFGATEPFVLPRQYAKNVGRTVQITTTDG----KVQEGVLKG 110

Query: 138 TSETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARLI 173
            ++    LE E R  K + + +I        +   +  A++I
Sbjct: 111 EADGVVTLETETREPKPVGKGKITVKKEHSFALSDIKEAKVI 152


>gi|313680245|ref|YP_004057984.1| hypothetical protein Ocepr_1355 [Oceanithermus profundus DSM 14977]
 gi|313152960|gb|ADR36811.1| protein of unknown function DUF150 [Oceanithermus profundus DSM
           14977]
          Length = 147

 Score = 75.0 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER-DDGNMTLRDCEELSQAISPILD 81
           D+  +++ V+  + +  +++ L    K  +L + +ER D+  +T+ D +  ++ I   LD
Sbjct: 2   DLWELVENVVRPLGYEPLEVRLHGAGKTQVLTVRLERLDEAPITVADLQRANRIIGLELD 61

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             + I G YRLEV SPG DRP++ +  F R+ G  V               G+++   E 
Sbjct: 62  RADPIRGSYRLEVESPGPDRPLLTRRHFERFAGLKVKVRTEEGG-----FTGRVVEVGED 116

Query: 142 GFFLEKEKRGEK 153
               E      +
Sbjct: 117 AVTFELAGGERR 128


>gi|213864825|ref|ZP_03386944.1| hypothetical protein SentesT_33610 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 82

 Score = 75.0 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LEVSSPG+DRP+     + R+ G  V   + ++  +++K  G I         +  E 
Sbjct: 4   YNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVEG 63

Query: 150 RGEKDMNELQIAISFDSLLSARLIV 174
           + E          +  ++  A L+ 
Sbjct: 64  KDEV--------FALSNIQKANLVP 80


>gi|259645134|sp|A5GVG1|RIMP_SYNR3 RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 10/152 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVER--DDGNMTLRDCEELSQAISPIL 80
             I ++     + + F    + L   +     I   R  D  ++ L DC   SQA    L
Sbjct: 7   EPIEALASATAQSLGFLMESVVLHSHRAPQALIVAVRKGDGSDVNLDDCASFSQAFGEAL 66

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           +   ++ G Y LE++SPG+   + +  DF  + G  V      + G + +  G ++G   
Sbjct: 67  ETGELLTGAYVLEITSPGLGDVLQQDRDFRSFRGFPVCVRQRDAKGGEIQREGTLLGRDA 126

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               L    R +         I    +L  RL
Sbjct: 127 DAVELNLRGRIQ--------RIPRSDVLEVRL 150


>gi|260910868|ref|ZP_05917512.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260635019|gb|EEX53065.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 167

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  + +  +  V +    +  ++++  ++  D  + + DC ELS+ I   L+ + 
Sbjct: 20  VKQLVEQWLADKEYFLVDVETSPDSRIVVE--IDHAD-GVWIEDCVELSRFIEEHLNRDE 76

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V           +K  G +       F 
Sbjct: 77  ---EDYELEVGSAGLGQPFKVPQQYVNFIGKEVEVLDKDG----KKYKGTLKSVDGNDFV 129

Query: 145 LEKEKRGEKDMNELQI 160
           +   ++ + +  +  +
Sbjct: 130 VTVNEKVKVEGKKRPV 145


>gi|332670043|ref|YP_004453051.1| hypothetical protein Celf_1529 [Cellulomonas fimi ATCC 484]
 gi|332339081|gb|AEE45664.1| protein of unknown function DUF150 [Cellulomonas fimi ATCC 484]
          Length = 193

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 9/169 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFV----ERDDGNMTLRDCEE 71
                 A  +  V++P + E+      + +       +   V    E D+G + L    E
Sbjct: 1   MVAPAPAQRVRQVVEPAVAEVGLLLEDVEVTRAGAHSVVRVVVDVPEDDEGELDLDRVAE 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +++A+S  LD ++++ G Y LEVSSPG+ RP+ ++  F R  G  V+  +V       +L
Sbjct: 61  VTRAVSDALDAQDVVAGEYTLEVSSPGVSRPLTQRRHFARAVGRSVSVRLVDGGSVSGRL 120

Query: 132 IGKIMGTSETGFFLEKEK-----RGEKDMNELQIAISFDSLLSARLIVT 175
                G  +    +         +G +  N   + I    +  AR+ V 
Sbjct: 121 TAVERGAQDADDAVVVVPVTPGLKGRRPKNGAPVRILLADVRDARVEVD 169


>gi|163753870|ref|ZP_02160993.1| hypothetical protein KAOT1_19647 [Kordia algicida OT-1]
 gi|161326084|gb|EDP97410.1| hypothetical protein KAOT1_19647 [Kordia algicida OT-1]
          Length = 155

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 70/161 (43%), Gaps = 17/161 (10%)

Query: 22  AGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ ++Q V+EE S    +   +     +++ I  +     +TL DC ++S+ I   L
Sbjct: 3   KEKVTKLLQEVLEEESSLFLISKEIQAGNKIVIVIDGDN---GVTLNDCMKVSRHIEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E      + LEV S GI   +     + +  G  +   +  +    QK+ G ++   +
Sbjct: 60  DREE---EDFSLEVLSSGISEGITHIRQYKKNVGRKLEIIMADN----QKVTGTLVEADD 112

Query: 141 TGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIVT 175
               L+ + R  K + + +I       I +  ++ A+++VT
Sbjct: 113 EKVKLQWKAREPKPIGKGKITVQKEQEIPYKDIVKAKVMVT 153


>gi|325299859|ref|YP_004259776.1| Ribosome maturation factor rimP [Bacteroides salanitronis DSM
           18170]
 gi|324319412|gb|ADY37303.1| Ribosome maturation factor rimP [Bacteroides salanitronis DSM
           18170]
          Length = 155

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 62/153 (40%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +++  ++   +  V +S+  +  ++++  ++  D  + + DC +LS+ I   L  E+
Sbjct: 7   VTRIVEEWLDGKDYFLVDVSVSPDDKIVVE--IDHAD-GVWIDDCVDLSRYIESRLSRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET--- 141
                Y LEV S GI +P      +  + G  V           +K  G +   +E    
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLKQYQIYIGKEVEV----MDNTGKKWKGVLADANEENFT 116

Query: 142 ---GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
                 ++ E      + E  +  ++D +   +
Sbjct: 117 VTMTVKVKPEGAKRPKLVEQNVTFTYDEIKYTK 149


>gi|311744142|ref|ZP_07717948.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
 gi|311313272|gb|EFQ83183.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
          Length = 160

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 72/156 (46%), Gaps = 13/156 (8%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +    +++++  +E        +++    +  +L++ ++ DD  + +     +++A++ +
Sbjct: 1   MDERFTALVRSCVEPEGLELDDLTISAAGRKRVLRVALDSDD-GVGIDQITAVTRALNAV 59

Query: 80  LDVEN-----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           LD +      +    Y LEV+S G+  P+     + R +G +V  E+   + +     G+
Sbjct: 60  LDDDPAAVAALGGTPYTLEVTSRGVSSPLTSPRHWRRNHGRLVKVELTDGAVE----TGR 115

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           I  +++T   L +++R     +  +  I++  +  A
Sbjct: 116 ITSSTDTHATLAQQERRGAPTDIRE--IAYPEVARA 149


>gi|78213594|ref|YP_382373.1| hypothetical protein Syncc9605_2078 [Synechococcus sp. CC9605]
 gi|123577663|sp|Q3AHW4|RIMP_SYNSC RecName: Full=Ribosome maturation factor rimP
 gi|78198053|gb|ABB35818.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 155

 Score = 74.3 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 2/141 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISPILD 81
           D+ ++   V     F    I LL     + L++ +    G +++L DC   S  +   L+
Sbjct: 8   DLETLATKVAASKGFALCGIQLLTHMSPMTLEVQIRHSSGADVSLDDCAGFSGVLGDALE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
              ++   Y LE+SSPGI   +    DF  + G  V          +Q+L G ++     
Sbjct: 68  ASTLLTDAYVLEISSPGIGDQLSSDRDFETFRGFPVEVHHRDKDDSEQRLEGLLLERDAD 127

Query: 142 GFFLEKEKRGEKDMNELQIAI 162
              +    R ++   +  I +
Sbjct: 128 TLQINIRGRIKRIARDCVIGV 148


>gi|260436689|ref|ZP_05790659.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
 gi|260414563|gb|EEX07859.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
          Length = 155

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 2/141 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISPILD 81
           D+ +++  V     F    I LL     + L++ +    G +++L DC   S  +   L+
Sbjct: 8   DLETLVTDVASSKGFALCGIQLLTHMSPMTLEVQIRHSSGADVSLDDCAGFSGVLGDALE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
              ++   Y LE+SSPGI   +    DF  + G  V      +   +Q+L G ++     
Sbjct: 68  ASTLLTDAYVLEISSPGIGDQLSSDRDFETFRGFPVEVHHRDNDDSEQRLEGLLLERDAD 127

Query: 142 GFFLEKEKRGEKDMNELQIAI 162
              +    R ++   +  I +
Sbjct: 128 TLQINIRGRIKRIPRDCVIGV 148


>gi|183981904|ref|YP_001850195.1| hypothetical protein MMAR_1891 [Mycobacterium marinum M]
 gi|226696166|sp|B2HKR9|RIMP_MYCMM RecName: Full=Ribosome maturation factor rimP
 gi|183175230|gb|ACC40340.1| conserved hypothetical protein [Mycobacterium marinum M]
          Length = 177

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 51/147 (34%), Gaps = 8/147 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++        +    + +           V   D  + L     LS++ S +LD  
Sbjct: 10  QVIELLGGEFARAGYEIEDVVIDHRARPPRITVVADGDTTLDLDTIAVLSRSASSLLDSL 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPGIDRP+  +  F R  G  V   +   S     L G+I        
Sbjct: 70  DNIGDSYVLEVSSPGIDRPLTSEKHFRRARGRKVELTLADGSQ----LTGRIGALQSGSL 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            L      E  + E    I    +  A
Sbjct: 126 DLVVRAGREWKVRE----IPLAEVEKA 148


>gi|256832249|ref|YP_003160976.1| hypothetical protein Jden_1017 [Jonesia denitrificans DSM 20603]
 gi|256685780|gb|ACV08673.1| protein of unknown function DUF150 [Jonesia denitrificans DSM
           20603]
          Length = 177

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 64/163 (39%), Gaps = 19/163 (11%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDG---NMTLRDCEE 71
              + +   +   + P++ +       +  L       +++ V+  +     + L     
Sbjct: 1   MARLDVPTQVHDAVAPIVHDAGLFLEDLEYLGSGPTTTIRVTVDLPEDVSGPVGLETISS 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +S  LD  +++   Y LEVSSPG  RP+ +   F R  G +++ + V      ++ 
Sbjct: 61  VSRDLSTALDSVSVLHSQYTLEVSSPGTSRPLTQPRHFRRNVGRLISVKTVNG----ERF 116

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +++  ++                + +  ++   +  A++ V
Sbjct: 117 TERLVEVTDDAVLF-----------DTRRHVALADIRRAKVEV 148


>gi|237749787|ref|ZP_04580267.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229374652|gb|EEO25043.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 167

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 15/165 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  D+   I+ +I +       I LL+E  +++L+I + + +  ++L DCE +S  I+P+
Sbjct: 2   ITQDLHDKIESLITQKGLELYDIELLKENESMILRISIFKKE-GISLDDCENISTLIAPL 60

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LDVE      Y LEVSSPG++R + +   FL   G  VA  +     +K  + G +   +
Sbjct: 61  LDVELSDLEAYHLEVSSPGVERNLKKPKHFLCSIGQKVAVTMS----NKTIINGILESYN 116

Query: 140 ETGFFLEKEKRGEKDM---------NELQIAISFDSLLSARLIVT 175
                +++  +  K                 I  +     + I  
Sbjct: 117 TDEITIKEILKPTKKKQNNLKESSQEVKTHIIKLNETKKVKTIFD 161


>gi|332883099|gb|EGK03383.1| hypothetical protein HMPREF9456_02020 [Dysgonomonas mossii DSM
           22836]
          Length = 187

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +   M     I  + +  +E  +   V + +     +++++     D  +++ DC  LS+
Sbjct: 29  LVKKMIEKELIRDITEKYLEGTTMFLVDVVVKPGNAIVVEV---DSDEGVSIDDCIALSR 85

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I   LD E      + LEV S GI  P+     + ++ G+ V           QKL G 
Sbjct: 86  NIESHLDRE---AEDFELEVGSAGITSPLKIPRQYKKYIGNEVEVLTKKG----QKLSGV 138

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAIS 163
           +    +  F +   K  + D  + ++A+ 
Sbjct: 139 LKSCDDNSFVITVTKMVKPDGGKKKVAVD 167


>gi|325286755|ref|YP_004262545.1| Ribosome maturation factor rimP [Cellulophaga lytica DSM 7489]
 gi|324322209|gb|ADY29674.1| Ribosome maturation factor rimP [Cellulophaga lytica DSM 7489]
          Length = 154

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 72/160 (45%), Gaps = 17/160 (10%)

Query: 22  AGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++S+++  ++E  S   +  ++  +  + + +  +     +TL+DC  +S+AI   L
Sbjct: 3   KEQVTSLLEGALKETPSLFLIDFTITPDFKINIVLDGDN---GVTLKDCVAVSRAIDHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E      + +EV+S G   P+V    + +  G  +  + +      +   G++   +E
Sbjct: 60  DREE---QDFSVEVASAGASSPLVLPRQYAKNIGRKLEVKTIEG----RNFEGQLTAATE 112

Query: 141 TGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
               LE + R +K + + ++       I F  +  A++++
Sbjct: 113 ETITLEWKAREQKPVGKGKVTVQKKEEILFSDIKEAKVVL 152


>gi|159904154|ref|YP_001551498.1| hypothetical protein P9211_16131 [Prochlorococcus marinus str. MIT
           9211]
 gi|159889330|gb|ABX09544.1| DUF150 [Prochlorococcus marinus str. MIT 9211]
          Length = 171

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 59/146 (40%), Gaps = 2/146 (1%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISP 78
           +   +  +      +     V++      K + +Q+ +++    +++L DC + S+ IS 
Sbjct: 21  IVTSLKILASNTAADKGLEVVELKFNPHSKPITIQVQIQKKPKKDVSLDDCAQFSELISE 80

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            +++  +I   Y LE+SSPG+   +    DF  + G  +      +   K    G +   
Sbjct: 81  TIELSKLINEPYLLEISSPGLGDLLQTDKDFKTFKGFPIEVLFKNNENTKLTKSGLLHER 140

Query: 139 SETGFFLEKEKRGEKDMNELQIAISF 164
           S+    +  + R  K   E  I +  
Sbjct: 141 SKEYLLINIKGRISKIPREDVITVQL 166


>gi|240172758|ref|ZP_04751417.1| hypothetical protein MkanA1_25812 [Mycobacterium kansasii ATCC
           12478]
          Length = 177

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 10/148 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            +  ++        +    + +        + +  +  D  + L     LS++ S +LD 
Sbjct: 10  QVIELLGGAFACAGYEIEDVVIDTRAHPPRITVVADG-DTALDLDTIAALSRSASALLDG 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I   Y LEVSSPG++RP+  +  F R  G  +   +   S    +L G++   +   
Sbjct: 69  LDAIRDKYVLEVSSPGVERPLTSEKHFRRARGRKIELTLADGS----RLTGRVGELTGDT 124

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSA 170
             L   +     +      I    +L A
Sbjct: 125 LALVIRQGRNWAVR----QIPLAQVLKA 148


>gi|327403852|ref|YP_004344690.1| Ribosome maturation factor rimP [Fluviicola taffensis DSM 16823]
 gi|327319360|gb|AEA43852.1| Ribosome maturation factor rimP [Fluviicola taffensis DSM 16823]
          Length = 158

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 79/158 (50%), Gaps = 13/158 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +  + +  I+E   R   + L      ++++ +++ +GN+++ DC  +S+ I   LD
Sbjct: 4   KQTVKELAEERIKERDERLFIVELTISSTNVIRLELDKTEGNVSIEDCMSVSRNIEHNLD 63

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            E+     + L VSS G+D+P+   + +++  G  +  ++      K+K+ G ++   ET
Sbjct: 64  REDA---DFELSVSSAGLDKPLRVHAQYVKNIGRGLDVKLKS----KEKVTGTLISVDET 116

Query: 142 GFFLE------KEKRGEKDMNELQIAISFDSLLSARLI 173
           G  L+       E + +K++  ++  I+F  +  A+++
Sbjct: 117 GVVLQHEEKQAIEGKKKKELVVIENKIAFSDINEAKIV 154


>gi|260060677|ref|YP_003193757.1| hypothetical protein RB2501_03740 [Robiginitalea biformata
           HTCC2501]
 gi|88784807|gb|EAR15976.1| hypothetical protein RB2501_03740 [Robiginitalea biformata
           HTCC2501]
          Length = 157

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 67/161 (41%), Gaps = 18/161 (11%)

Query: 21  LAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +S ++   +        + + +    +  +Q+ ++ D+  ++L+DC ++S+A+   
Sbjct: 6   LEKRVSELLDEALAGRPELFLIDLKVNP--DQSIQVTLDGDE-GISLQDCMDISRAVEHS 62

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD +     ++ LEV S G   P++    + +  G  +A          +++ G +    
Sbjct: 63  LDRDEF---NFSLEVGSAGATAPLLMPRQYRKHIGRKLAVR-----RAGKEVQGTLTAAD 114

Query: 140 ETGFFLEKEKRGEKDMNE------LQIAISFDSLLSARLIV 174
           +    L  + R  K + +       +  I    +  A++++
Sbjct: 115 DKDITLSWKAREPKPVGKGKHTVRKEETIPHSEIEQAKVVL 155


>gi|119717417|ref|YP_924382.1| hypothetical protein Noca_3193 [Nocardioides sp. JS614]
 gi|166988630|sp|A1SLL0|RIMP_NOCSJ RecName: Full=Ribosome maturation factor rimP
 gi|119538078|gb|ABL82695.1| protein of unknown function DUF150 [Nocardioides sp. JS614]
          Length = 175

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 65/149 (43%), Gaps = 15/149 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            I + +   +  +      + +    K  +L++ V++ DG +TL +  E ++ ++ +LD 
Sbjct: 12  QIEAELDDPLRALGLDIEAVEITPAGKRRILRVAVDK-DGGVTLDEVAEATREVNRVLDG 70

Query: 83  ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             ++ E  Y LEV+S G+DRP+     + R  G +V           +   G+I+ ++E 
Sbjct: 71  SEVMGEQPYTLEVTSRGVDRPLTLPRHWRRNAGRLVKVAFADG----RAATGRILDSNEE 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              L+     +         +++  +  A
Sbjct: 127 QVTLDVGGTRQ--------QVAYAEVKKA 147


>gi|198277416|ref|ZP_03209947.1| hypothetical protein BACPLE_03630 [Bacteroides plebeius DSM 17135]
 gi|198269914|gb|EDY94184.1| hypothetical protein BACPLE_03630 [Bacteroides plebeius DSM 17135]
          Length = 155

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 65/153 (42%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +++  +E+ S+  V +++  +  ++++  ++  +  + + DC ELS+ I   L  E 
Sbjct: 7   VARIVEEWLEDKSYFLVDVNVSPDDKIVVE--IDHAE-GVWIDDCVELSRYIESKLSREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V           +K  G +   +E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYVAHVGCEVEVLDKTG----KKWTGVLADANEENFT 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  E + + +        E  +  ++D +   +
Sbjct: 117 VTVEVKIKPEGAKRPKLVEQNVTFTYDEIKYTK 149


>gi|269795642|ref|YP_003315097.1| hypothetical protein Sked_23480 [Sanguibacter keddieii DSM 10542]
 gi|269097827|gb|ACZ22263.1| uncharacterized conserved protein [Sanguibacter keddieii DSM 10542]
          Length = 181

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 67/171 (39%), Gaps = 17/171 (9%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN---MTLRDCEE 71
                +A  ++  ++P +E        + +       ++++ ++  +     + L    E
Sbjct: 1   MAASPIAEQVADAVRPGVESAGLVLEDVQVAPAGARTVVRVVLDLTEDQTGALGLDQVAE 60

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ IS  LD    + G + LEV+SPG  RP+     F R    +VA  +V  +      
Sbjct: 61  VSRVISDTLDTLPALPGKFTLEVTSPGTSRPLTELRHFKRARTRLVAVTLVEGAP----F 116

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182
             ++    +     E         +     + F ++ S ++ V  EL RA+
Sbjct: 117 TERLTSVEDEVLVFE-------GADGAPHEVPFAAVSSGQVEV--ELKRAA 158


>gi|32266338|ref|NP_860370.1| hypothetical protein HH0839 [Helicobacter hepaticus ATCC 51449]
 gi|34222773|sp|P59821|RIMP_HELHP RecName: Full=Ribosome maturation factor rimP
 gi|32262388|gb|AAP77436.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 157

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 22/165 (13%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG----------NMTLRDC 69
           L+    + I+ +   +      I   +E    +L++ + R              ++L+DC
Sbjct: 2   LSQHTQARIEQLAATLGLYIYDIDFFKEDNRPILRVSITRKAPMQKQDCKNGLAVSLQDC 61

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + +S+ ISP+LDVE+     Y LEVSSPG++R + +   ++   G  V+ +++     K 
Sbjct: 62  QNVSELISPLLDVEDENLKDYNLEVSSPGLERVLKKPQHYIYSLGEKVSIKLMD----KS 117

Query: 130 KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            + G +   +E    +  +        +  ++ SF  +   +++ 
Sbjct: 118 VIEGILHDVNEN-VSISID------TGKEILSFSFADMKKIKVVF 155


>gi|305665254|ref|YP_003861541.1| hypothetical protein FB2170_03110 [Maribacter sp. HTCC2170]
 gi|88710007|gb|EAR02239.1| hypothetical protein FB2170_03110 [Maribacter sp. HTCC2170]
          Length = 153

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 69/161 (42%), Gaps = 18/161 (11%)

Query: 21  LAGDISSVIQPVI-EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   + S++   + ++ S   +  ++  + ++ + +  +     ++++DC ++S+ I   
Sbjct: 2   LKDKVKSLLNEALSQDESLFLIDFTMGADNSINVVLDGDN---GVSVQDCMKVSRGIEHN 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E      + L V+S G   PMV    + +  G  V  + + +        G +   S
Sbjct: 59  LDREE---EDFSLTVTSAGAASPMVNPRQYQKNIGRKVKVQTLENV-----YEGNLTAAS 110

Query: 140 ETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
             G  LE + R  K + + +        I+F  +  A++I+
Sbjct: 111 TNGIVLEWKAREPKPIGKGKTTVQKKKEITFSDIKEAKVIL 151


>gi|325105521|ref|YP_004275175.1| protein of unknown function DUF150 [Pedobacter saltans DSM 12145]
 gi|324974369|gb|ADY53353.1| protein of unknown function DUF150 [Pedobacter saltans DSM 12145]
          Length = 153

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 10/156 (6%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   +  + +  +++      V + +  +K  LL       D  +T+ DC ++S+ + 
Sbjct: 1   MSVEQRVRELAEEKLQDREDLFIVSVKVQNKKITLLL----DGDNGITIEDCAKVSRHVG 56

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ EN++   Y+LEV S G+D  +V    + +  G  +   +V      + + GK++G
Sbjct: 57  YHLEEENLMTEAYQLEVGSAGLDAALVLDRQYQKNIGRNL---LVKKVDGSK-IEGKLIG 112

Query: 138 TSETGFFLEKE-KRGEKDMNELQIAISFDSLLSARL 172
            + T   +  E K   K    ++  I  +++ SA++
Sbjct: 113 ANPTNLVISHEVKEKGKKAQTVETVIEKENIASAKV 148


>gi|311748746|ref|ZP_07722531.1| hypothetical protein ALPR1_20868 [Algoriphagus sp. PR1]
 gi|126577280|gb|EAZ81528.1| hypothetical protein ALPR1_20868 [Algoriphagus sp. PR1]
          Length = 157

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 7/153 (4%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELSQAIS 77
             L   I  +++  + + S   V+++L+ +     L I ++  D  + ++ C  +S+A++
Sbjct: 2   SELKQAIEEIVEKHLPDESHFVVEVNLVPKSGKTVLSILID-ADQGLNVQTCANVSRAVA 60

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             L+ + ++   Y LEVSSPG+D P+  +  F +  G  +   +         L GK++ 
Sbjct: 61  EELEAKELMSEAYILEVSSPGVDYPLSSRRQFQKNIGRELKVLLTSGQE----LKGKLLE 116

Query: 138 TSETGFF-LEKEKRGEKDMNELQIAISFDSLLS 169
              TG   L K+K   K   E ++ +SF+ +  
Sbjct: 117 VDTTGVKMLVKKKEKGKKATEEEVVLSFEEMKK 149


>gi|213852789|ref|ZP_03382321.1| hypothetical protein SentesT_07966 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 82

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
           Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K  G I         +  E 
Sbjct: 4   YNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEG 63

Query: 150 RGEKDMNELQIAISFDSLLSARLIV 174
           + E          +  ++  A L+ 
Sbjct: 64  KDEV--------FALSNIQKANLVP 80


>gi|302558073|ref|ZP_07310415.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302475691|gb|EFL38784.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 173

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 67/154 (43%), Gaps = 9/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +++P++        +I++    +  +L++ V+  D    L    ++S+A+S  LD
Sbjct: 7   ERLRELLEPLVSSQGLDLEEIAVDSVGRKRVLRVVVDS-DTGADLDRIADVSRALSAKLD 65

Query: 82  VENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
             + +    Y LEV +PG +R +     ++R  G +V  ++         L  +I+   +
Sbjct: 66  ETDAMGSAEYTLEVGTPGAERLLTEHRHYVRATGRLVRFQLAEGGE----LDARILRADD 121

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            G  LE      +        ++FD +  AR+ V
Sbjct: 122 EGLDLEVPGVKGRKATAR--RLAFDDITRARVQV 153


>gi|320531906|ref|ZP_08032816.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320135875|gb|EFW27913.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 172

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 10/171 (5%)

Query: 8   HSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLR 67
             + +PR   D  LA  ++ ++ PV+ +       +         +   +          
Sbjct: 5   DPRQDPRKRAD-ALARSLTDLLVPVVNDAGLHLEGVETTRAGKYSVVRVLVDLVDGPGDL 63

Query: 68  DCEE---LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           D +    ++ A+S  LD  + ++G Y LEVS+PG +R +     F R  GH V       
Sbjct: 64  DLDSLGPVTAAVSQALDEADPVKGQYTLEVSTPGAERELTTLRHFRRAVGHSVRVRTADD 123

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKR-GEKDMNELQIAISFDSLLSARLIV 174
                +L G +      G   E         ++ ++  I+   +  AR++V
Sbjct: 124 -----ELTGVVTAADGDGDASEHNGGMVRIKVDGVEDRIALGDITEARMVV 169


>gi|259016314|sp|Q3AZB4|RIMP_SYNS9 RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 10/151 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPILD 81
           ++  + Q V     F    I LL     + LQ+ +      ++ L DC   S  +   L+
Sbjct: 8   ELEQLTQRVAGLQGFELCGIQLLTHMNPITLQVQIRHTSGSDVNLDDCAGFSGVLGEALE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
               +   Y LE+SSPGI   +    DF  + G  V          + +L G +   +  
Sbjct: 68  ESQQLVEAYVLEISSPGIGEQLSCDRDFQTFRGFPVDVTHRDQGNVEHRLEGLLHERNTD 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +    R +        +I  D ++  RL
Sbjct: 128 SLQINIRGRIK--------SIPRDQVIEVRL 150


>gi|184201253|ref|YP_001855460.1| hypothetical protein KRH_16070 [Kocuria rhizophila DC2201]
 gi|259585800|sp|B2GKR8|RIMP_KOCRD RecName: Full=Ribosome maturation factor rimP
 gi|183581483|dbj|BAG29954.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 163

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 11/156 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN--MTLRDCEELSQAISPI 79
             I + ++PV+        +  L        LQ+ V+  DG   + L     ++Q IS  
Sbjct: 7   APIRATVEPVVAAAGLHLEECELKGQGATRTLQVLVDLPDGTEALGLDRVAAVAQEISDA 66

Query: 80  LDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           LD ++ + G  Y LEVSSPG  R +     + R  GH+V    +      ++   +++  
Sbjct: 67  LDRDDPVPGPPYELEVSSPGATRTLETPRHWRRTVGHLVRIRTLEG----ERYTARLLEA 122

Query: 139 SETGFFLEKEKRGEKDMNELQI---AISFDSLLSAR 171
            E    +++  + +K M    +    + + S+ +AR
Sbjct: 123 HEDHAVVQRSHQPKKGMPVKLLDPERVDYASIRTAR 158


>gi|288928620|ref|ZP_06422466.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288329604|gb|EFC68189.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 154

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  + +  +  V +    +  ++++  ++  D  + + DC ELS+ I   L+ + 
Sbjct: 7   VKELVEQWLADKEYFLVDVETSPDSRIVVE--IDHAD-GVWIEDCVELSRFIEEHLNRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V           +K  G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVPQQYVNFIGKEVEVLDKDG----KKYKGILKSVDGNDFV 116

Query: 145 LEKEKRGEKDMNELQI 160
           +   ++ + +  +  +
Sbjct: 117 VAVNEKVKVEGKKRPV 132


>gi|208434347|ref|YP_002266013.1| hypothetical protein HPG27_382 [Helicobacter pylori G27]
 gi|208432276|gb|ACI27147.1| hypothetical protein HPG27_382 [Helicobacter pylori G27]
          Length = 135

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 12/140 (8%)

Query: 33  IEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           IE + +    +SL++E    +L++ ++  +G ++L  C+++S+ ISP+LDV + I+  Y 
Sbjct: 2   IESLGYLLYDVSLVKENEQHILRVSLKNPNGAVSLDICQQVSEIISPLLDVCDFIQDAYI 61

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           LEVSS G++R +     F    G  V  ++     +K+     +   ++     E E   
Sbjct: 62  LEVSSMGLERTLKTPKHFKLSLGEKVEVKLT----NKESFQAVLKDANDLSADFELEDHA 117

Query: 152 EKDMNELQIAISFDSLLSAR 171
            K       ++ +  L   +
Sbjct: 118 IK-------SVEYKDLKKVK 130


>gi|205373421|ref|ZP_03226225.1| hypothetical protein Bcoam_09030 [Bacillus coahuilensis m4-4]
          Length = 112

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 58/112 (51%), Gaps = 1/112 (0%)

Query: 51  LLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFL 110
           ++L++++++ D  + + +C  +S+ +   +D  + I+ +Y LEVSSPG +RP+ ++ DF 
Sbjct: 1   MVLRVYIDK-DAGVDIEECGIVSERLGEKIDELDPIQHNYFLEVSSPGAERPLKKEKDFE 59

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
           +  G  V  +       +++L        +    L  + +  K+ N+  + +
Sbjct: 60  KAVGKQVYVKTYEPIEGEKELKVSYYKMIKILLLLRLQSKQRKEKNKKFLKV 111


>gi|28895280|ref|NP_801630.1| hypothetical protein SPs0368 [Streptococcus pyogenes SSI-1]
 gi|28810526|dbj|BAC63463.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 127

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVR 105
             + +L I V+++D  +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GSDYILSILVDKED-GITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  +    +   G ++        ++   +         + I + 
Sbjct: 61  ADSLKAAVGSYINVSLYQAIDKVKVFQGDLLAFDGETLTIDYLDK----TRHKIVNIPYQ 116

Query: 166 SLLSARLIV 174
           ++   R+ V
Sbjct: 117 AVAKVRMAV 125


>gi|306820435|ref|ZP_07454071.1| protein of hypothetical function DUF150 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551510|gb|EFM39465.1| protein of hypothetical function DUF150 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 153

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 11/160 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQA 75
               +      ++  V+ E  +  V +  ++E   + L+I +++ DG+MT+ DC +LS  
Sbjct: 1   MSKKIEQITEELVLRVLPEE-YEMVDVEYVKEAGEMYLRILIDK-DGSMTIDDCVKLSGI 58

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-KQKLIGK 134
           I   +D ++ I+  Y LE+SSPG+DR + +  DF+R  G  V  ++        ++ +  
Sbjct: 59  IGDEIDKKDYIKDAYNLEISSPGLDRTLKKDRDFVREKGKDVEVKLFKKDEKYGKEFVAV 118

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           + G  E G  +         ++E  ++I    +    L +
Sbjct: 119 LEGLDENGNVVFV-------IDEEVVSIDKKEIAKINLYL 151


>gi|46198658|ref|YP_004325.1| putative cytoplasmic protein [Thermus thermophilus HB27]
 gi|55980671|ref|YP_143968.1| hypothetical protein TTHA0702 [Thermus thermophilus HB8]
 gi|51316688|sp|Q72KG3|RIMP_THET2 RecName: Full=Ribosome maturation factor rimP
 gi|62299029|sp|Q56425|RIMP_THET8 RecName: Full=Ribosome maturation factor rimP
 gi|46196281|gb|AAS80698.1| hypothetical cytosolic protein [Thermus thermophilus HB27]
 gi|55772084|dbj|BAD70525.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 157

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 8/133 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  D+  +++  +  +    +++     +  LL     +D+  +T+ D EE S+ I   L
Sbjct: 15  VTVDLWQLVEEAVSPLGLDVLEVHF--ARGELLVRLERKDERPITVADLEEASRHIEAAL 72

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I G YRL V SPG  RP+  +  F R+ G              +   G+I+    
Sbjct: 73  DREDPIPGSYRLLVESPGPKRPLFTRRHFERFQGLKAKV------PGPEGFTGRILRVEG 126

Query: 141 TGFFLEKEKRGEK 153
                +      +
Sbjct: 127 EEVVFQVGDEERR 139


>gi|326382938|ref|ZP_08204628.1| ribosome maturation protein RimP [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198528|gb|EGD55712.1| ribosome maturation protein RimP [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 181

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 68/157 (43%), Gaps = 8/157 (5%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
                L GDI  V+   + E  +   ++++        ++I V+R DG  +L    +LS+
Sbjct: 1   MTADALTGDIGDVLTAPLAEHGYDLEEVAILTPPGRREIRIVVDR-DGGASLDALADLSR 59

Query: 75  AISPILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           A+  +LD  +++    Y LE+++PGI RP+     + R  G  V  E  +  G  + +  
Sbjct: 60  ALESVLDDSDLLGESPYDLELTTPGIGRPLTLPRHWRRSQGRKVTAEYTV-DGAARTVEA 118

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           ++  + +    L    +         + ++   ++ A
Sbjct: 119 RVGESDDDQVTLVLVDKSRIK----TVDVALADIVRA 151


>gi|259586224|sp|A9BCI2|RIMP_PROM4 RecName: Full=Ribosome maturation factor rimP
          Length = 155

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 59/150 (39%), Gaps = 2/150 (1%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQ 74
               +   +  +      +     V++      K + +Q+ +++    +++L DC + S+
Sbjct: 1   MSNPIVTSLKILASNTAADKGLEVVELKFNPHSKPITIQVQIQKKPKKDVSLDDCAQFSE 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            IS  +++  +I   Y LE+SSPG+   +    DF  + G  +      +   K    G 
Sbjct: 61  LISETIELSKLINEPYLLEISSPGLGDLLQTDKDFKTFKGFPIEVLFKNNENTKLTKSGL 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISF 164
           +   S+    +  + R  K   E  I +  
Sbjct: 121 LHERSKEYLLINIKGRISKIPREDVITVQL 150


>gi|227549049|ref|ZP_03979098.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078903|gb|EEI16866.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 220

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 21/194 (10%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTL 66
           LH + E       G+   ++ +I+P+         ++  +        +     D + TL
Sbjct: 36  LHDRLER--MAFPGVDE-LTRLIEPIAAAHGMDVEKVRTVAAGKKSQVVIALDSDAHPTL 92

Query: 67  RDCEELSQAISPILDVENIIEG-----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
            + E +S  +S + D             Y LEV++PG+D P+     + R  G +V    
Sbjct: 93  DELEAVSNELSELFDARENAGDINFGAGYTLEVTTPGVDLPLTEPRHWRRNRGRLV---- 148

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDM-------NELQIAISFDSLLSARLIV 174
             + G+++  IG +    E    +  E +  +             + I F++  SA+L +
Sbjct: 149 --TVGEEKFRIGALDAAEEHVVLIATETKSPRAEVRPVSGLGPAVVEIEFNTPPSAQLQL 206

Query: 175 TDELLRASLNNYGS 188
            +     +      
Sbjct: 207 AELSFDQAAERAAD 220


>gi|320094044|ref|ZP_08025866.1| hypothetical protein HMPREF9005_0478 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319979023|gb|EFW10544.1| hypothetical protein HMPREF9005_0478 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 161

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 20/164 (12%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERD-------DGNMTLR 67
                    +  ++ PV+         +         L+++ V+            +   
Sbjct: 1   MAHPARDARLEELLGPVVAREDLELDTVVRTRSGGTPLVRVTVDTPLVEGAGEQARVDSD 60

Query: 68  DCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
               +S+A+S  LD  + I+G Y LEVS+PG +R +     + R  G  V  ++      
Sbjct: 61  TLAAVSRAVSAALDRADPIDGEYLLEVSTPGAERELTEPRHWKRQVGLPVRVKLRDGGH- 119

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
              + G++    +    LE +             I + ++  AR
Sbjct: 120 ---VSGRVRAADDVSATLETDG--------GTTTIEYANMKKAR 152


>gi|157738248|ref|YP_001490932.1| hypothetical protein Abu_2045 [Arcobacter butzleri RM4018]
 gi|166980266|sp|A8EWD9|RIMP_ARCB4 RecName: Full=Ribosome maturation factor rimP
 gi|157700102|gb|ABV68262.1| conserved hypothetical protein (DUF150 domain protein) [Arcobacter
           butzleri RM4018]
          Length = 142

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 14/147 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   I+  +E +  +   IS L E +  + ++ +   +G + L  C E+S+ +SPILDVE
Sbjct: 3   LEESIKLTVESLGAKLYDISTLREHDKNIFRVSI-TCEGGVNLDKCAEISRMLSPILDVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             + G Y LEVSSPGI+R + +   FL   G  V  +        +   G+++   E   
Sbjct: 62  EPMNGEYLLEVSSPGIERKLKKVDHFLASIGEKVKVKNFA----TEVFKGELICADEEKI 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            ++ E   E         +++D++LSA
Sbjct: 118 VIKTEFGNE--------ELTYDNILSA 136


>gi|15675575|ref|NP_269749.1| hypothetical protein SPy_1725 [Streptococcus pyogenes M1 GAS]
 gi|19746627|ref|NP_607763.1| hypothetical protein spyM18_1733 [Streptococcus pyogenes MGAS8232]
 gi|13622779|gb|AAK34470.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|19748846|gb|AAL98262.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 127

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 48  EKNLLLQIFVERDDGNMTLRDCEELSQAISPILD--VENIIEGHYRLEVSSPGIDRPMVR 105
             + +L I V++ +G +T+ D  +L+  ISP+LD    +     Y LEVSSPG++RP+  
Sbjct: 2   GSDYILSILVDK-EGGITVEDTSDLTNIISPLLDTIDPDPFPNQYMLEVSSPGLERPLKT 60

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
                   G  +   +  +    +   G ++        ++   +         + I + 
Sbjct: 61  ADSLKAAVGSYINVSLYQAIDKVKVFQGDLLAFDGETLTIDYLDK----TRHKIVNIPYQ 116

Query: 166 SLLSARLIV 174
           ++   R+ V
Sbjct: 117 AVAKVRMAV 125


>gi|89889479|ref|ZP_01200990.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89517752|gb|EAS20408.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 155

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 76/161 (47%), Gaps = 15/161 (9%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           L   +  ++    EE       + +  +    +++ ++ D+  +T+ DC  +S+A+   L
Sbjct: 2   LKETVQDLLDDAFEER-PDLFLMEMSIDGANEIKVIIDGDE-GVTVADCIFISRAVEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D + +    + LEV+S G   P+     F R  G     ++ + + +K+K++G+++   +
Sbjct: 60  DRDEL---DFSLEVASAGASAPLTLPRQFKRNVGR----QLEVINREKRKVVGQLVSADD 112

Query: 141 TGFFLEKEKRGEKDMNELQIA------ISFDSLLSARLIVT 175
               ++ + R  K + + ++       + +D +  A++++T
Sbjct: 113 ESIAIQWKAREPKPIGKGKVTVEKEWSLKYDDIKQAKVVIT 153


>gi|312139327|ref|YP_004006663.1| hypothetical protein REQ_19140 [Rhodococcus equi 103S]
 gi|311888666|emb|CBH47978.1| conserved hypothetical protein [Rhodococcus equi 103S]
          Length = 181

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 12/146 (8%)

Query: 27  SVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV-EN 84
            ++   I    +    +++    ++  +++ V+  D  + L +   LS  IS + D   +
Sbjct: 3   ELLADPIGREGYGLEDVTITLAGRHSSVRVMVDS-DSGLELDEVARLSHVISDVFDAASD 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             E  Y LEV+SPGIDRP+     + R  G  V  E+       + + G++   ++ G  
Sbjct: 62  FGESPYTLEVTSPGIDRPLTEGRHWRRAQGRKVLVELAE-----ESVTGRVGRLTDGGVD 116

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSA 170
           L  + +G   +  ++       +  A
Sbjct: 117 LVVKAKGGPVVRRVE----LADVKKA 138


>gi|315636536|ref|ZP_07891772.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315479185|gb|EFU69882.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 142

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 14/147 (9%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +   I+  +E +  +   IS L E +  + ++ +   +G + L  C E+S+ +SPILDVE
Sbjct: 3   LEESIKLTVESLGAKLYDISTLREHDKNIFRVSI-TCEGGVNLDKCAEISRMLSPILDVE 61

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
             + G Y LEVSSPGI+R + +   FL   G  V  +        +   G+++   E   
Sbjct: 62  EPMNGEYILEVSSPGIERKLKKVDHFLASIGEKVKVKNFA----TEVFKGELICADEEKI 117

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            ++ E   E         +++D++LSA
Sbjct: 118 VIKTEFGNE--------ELTYDNILSA 136


>gi|72161179|ref|YP_288836.1| hypothetical protein Tfu_0775 [Thermobifida fusca YX]
 gi|91208371|sp|Q47RV4|RIMP_THEFY RecName: Full=Ribosome maturation factor rimP
 gi|71914911|gb|AAZ54813.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 157

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 5/131 (3%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             ++ ++ P++ E       + +       L   V   D  + L    E+SQ IS  LD 
Sbjct: 8   ERLAQLVAPILAEAGLDLEGLDITPVGKRRLVRVVVDSDDGVDLERIGEVSQKISTALDE 67

Query: 83  ENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            +++    Y LEV+SPG+DRP+     + R  G +V   +V        + G+++   ET
Sbjct: 68  VDVMGQSPYVLEVTSPGVDRPLTEPRHWRRARGRLVHAPLVAGGQ----VKGRVIDADET 123

Query: 142 GFFLEKEKRGE 152
           G   + + + +
Sbjct: 124 GVTFDVDGQSQ 134


>gi|317504199|ref|ZP_07962193.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315664688|gb|EFV04361.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 186

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 59/153 (38%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +    +  V I + ++  ++++  ++  D  + + DC +LS+ I   L  + 
Sbjct: 38  VKKLVEEWLAGKEYFLVGIEISQDDKIVVE--IDHAD-GVWIEDCVDLSKYIEDHLSRDE 94

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V           +K  G +       F 
Sbjct: 95  ---EDYELEVGSAGLGQPFKVLQQYINFIGKEVEVLDADG----KKYQGVLKSVDGNDFT 147

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSAR 171
                 ++ E +      ++    + D++   +
Sbjct: 148 VTVNEKVKVEGKKRPQKMDVDHTFNMDNVKYTK 180


>gi|296171599|ref|ZP_06852839.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894054|gb|EFG73816.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 175

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 8/147 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++        +    + +         + +   D  + L     LS++ S +LD  
Sbjct: 10  QVIELLGGEFARAGYEIEDVVIDARARPPRIMVIADGDKALDLDTIATLSRSASALLDGL 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + +   Y LEVSSPG+DRP+  +  F R  G  V   +   S    +L G++  T     
Sbjct: 70  DDVGDRYVLEVSSPGVDRPLTSEKHFRRARGRKVDVVLSDGS----RLTGRVGETRGDTV 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            L          +     I+   +  A
Sbjct: 126 ALVV----RAGRDYRLREIARADIAKA 148


>gi|189459825|ref|ZP_03008610.1| hypothetical protein BACCOP_00455 [Bacteroides coprocola DSM 17136]
 gi|189433435|gb|EDV02420.1| hypothetical protein BACCOP_00455 [Bacteroides coprocola DSM 17136]
          Length = 155

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 61/153 (39%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ +++  +E   +  V +++  +  ++++  ++  +  + + DC +LS+ I   L+ E 
Sbjct: 7   VTRIVEEWLEGKDYFLVDVTVTPDDKIVVE--IDHAE-GVWIDDCVDLSRYIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V           +K  G +   +E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYIIHIGKEVEVLGKDG----KKWTGVLTDANEENFT 116

Query: 145 LEK------EKRGEKDMNELQIAISFDSLLSAR 171
           +        E      + E  +   +D +   +
Sbjct: 117 ITVQVKVKPEGAKRPKLVEQNVTFVYDEIKYTK 149


>gi|124026597|ref|YP_001015712.1| hypothetical protein NATL1_18921 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961665|gb|ABM76448.1| DUF150 [Prochlorococcus marinus str. NATL1A]
          Length = 183

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 11/152 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE--RDDGNMTLRDCEELSQAISPIL 80
           ++  +         F             L +Q+ +     D  +T+ DC  LSQ I   +
Sbjct: 35  ELKDLTAKSATNYGFDVTDFKMFTHLNPLSIQVNIRHKNPDKKVTIDDCSILSQYIDEAI 94

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              +I++  + LE+SS GI   +  + DF  + G  V          +Q+  G ++  ++
Sbjct: 95  QGSSILDQPFNLEISSEGISDFLTEEKDFQTFKGFPVEVSYQDLKKIEQQTNGLLLKRTD 154

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               + ++ + +         I  + ++  RL
Sbjct: 155 NELQINQKGKTQ--------RIPVEDVIQVRL 178


>gi|313205356|ref|YP_004044013.1| hypothetical protein Palpr_2899 [Paludibacter propionicigenes WB4]
 gi|312444672|gb|ADQ81028.1| protein of unknown function DUF150 [Paludibacter propionicigenes
           WB4]
          Length = 155

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 16/161 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M L   I+ +++  ++   +  V + + ++  + ++I        ++L  C EL++ I  
Sbjct: 1   MILKTTINQIVENYLDNTDYYLVDVKVTQDNRISVEI---DSFDGVSLEFCAELNRHIES 57

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
             D E      + LEVSS G+  P      + +  G+ V           +KL G +   
Sbjct: 58  QFDRE---VEDFELEVSSAGLTEPFKVLKQYEKNIGNEVETLTK----GGKKLSGVLKEV 110

Query: 139 SETGFFLEKEKRGEKDMNE------LQIAISFDSLLSARLI 173
            E  F LE EK  + +  +        +  S++ +   + I
Sbjct: 111 HEDNFVLEIEKTEKPEGAKRKTTIIEDVTFSYEDIKYTKYI 151


>gi|154491956|ref|ZP_02031582.1| hypothetical protein PARMER_01586 [Parabacteroides merdae ATCC
           43184]
 gi|154088197|gb|EDN87242.1| hypothetical protein PARMER_01586 [Parabacteroides merdae ATCC
           43184]
          Length = 157

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           IS +++  +       V + +      L+ I ++ D+  + + DC ELS+ +   LD + 
Sbjct: 9   ISQLVEEKLASSGNYLVDVVIKPGN--LIIIEIDNDE-GVCIDDCAELSRYVEGHLDRD- 64

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                + LEV S GI  P      +++  G+ V   +   +    KL G +    E G  
Sbjct: 65  --VEDFELEVGSAGITSPFKVLRQYVKNIGNEVEMLLKSGT----KLTGVLKSADENGVV 118

Query: 145 LEKEKRGEKDMNELQIAI------SFDSLLSAR 171
           +  EK+ + +  + ++ +      +FD +   +
Sbjct: 119 VTVEKQVKPEGAKRKVTVREDQSYTFDEIKYTK 151


>gi|239928613|ref|ZP_04685566.1| hypothetical protein SghaA1_10340 [Streptomyces ghanaensis ATCC
           14672]
 gi|291436938|ref|ZP_06576328.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339833|gb|EFE66789.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 173

 Score = 72.0 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 7/153 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  +++P++    F   +I++       +   V   D    L    ++S+A+S  LD 
Sbjct: 7   ERLRELLEPLVSSQGFDLEEIAVDSVGRRRVLRVVVDSDTGADLDRIADVSRALSAKLDE 66

Query: 83  ENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            + + +G Y LEV +PG +R +     ++R  G +V  ++         L+ +I+   + 
Sbjct: 67  TDAMGQGEYTLEVGTPGAERLLTEHRHYVRATGRLVRFQLAEGGE----LVARILEVGDD 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           G  LE      +        ++FD +  AR+ V
Sbjct: 123 GLDLEVPGVKGRKATAR--RLAFDDITRARVQV 153


>gi|307720624|ref|YP_003891764.1| hypothetical protein Saut_0703 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978717|gb|ADN08752.1| protein of unknown function DUF150 [Sulfurimonas autotrophica DSM
           16294]
          Length = 150

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 19/150 (12%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFV------ERDDGNMTLRDCEELSQAISPILD 81
           I+ V++ +        ++ E +  + ++ V      E     ++L +C EL+  ISP+LD
Sbjct: 7   IESVVKSVGLVLYDTVIVNENDETIFRVSVISNDVEEGKQKGVSLDECVELTHLISPLLD 66

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
           V   I G YRLEV SPGI+R +     F +  G  V+  +     +K+KL GK++     
Sbjct: 67  VTPPISGEYRLEVGSPGIERKLTTLDHFKKSVGENVSLLL----DEKEKLKGKLVKVEGN 122

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             F+EKE +           + F+++  A+
Sbjct: 123 KLFVEKEGQIH--------EVDFNAVKKAK 144


>gi|291519297|emb|CBK74518.1| Uncharacterized protein conserved in bacteria [Butyrivibrio
           fibrisolvens 16/4]
          Length = 100

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 49/94 (52%), Gaps = 4/94 (4%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +            +I P+++E+ F    +  ++   +  L+ ++++ +G +T+ DC ++S
Sbjct: 1   MSKHTDYEKRTEELITPILDELGFELYDVEYVKEGADYYLRAYIDK-EGGITIDDCVDVS 59

Query: 74  QAISPILDVENII--EGHYRLEVSSPGIDRPMVR 105
             ++ +LD E  I  +  Y  EVSSPG+ R + +
Sbjct: 60  HRMNELLDAEPQIGGDEGYIFEVSSPGLGRILKK 93


>gi|304390823|ref|ZP_07372775.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304325706|gb|EFL92952.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 159

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 16/154 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD--GNMTLRDCEELSQAISPI 79
             I  V+ PV+E       +I++   K+  ++ I ++  D   N+     E+ S+AI   
Sbjct: 2   EAIIQVVNPVVEAAGLYLEKIAVTGPKHQRVVAINLDLPDGVDNLGSAQLEDASRAIGAA 61

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + + G Y LE+S+ G +  +       R  G  V           Q   G +   +
Sbjct: 62  LDAADPLSGAYTLEISTLGAEHELTNLRLARRALGKDVEVRT-----GGQVRAGILTEVT 116

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ETG  +  +               F+ + S R +
Sbjct: 117 ETGLSVNDDGDVTVY--------PFEDIESVRTV 142


>gi|256820093|ref|YP_003141372.1| hypothetical protein Coch_1263 [Capnocytophaga ochracea DSM 7271]
 gi|256581676|gb|ACU92811.1| protein of unknown function DUF150 [Capnocytophaga ochracea DSM
           7271]
          Length = 155

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 15/161 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M     +  ++   + E         L    +  +++ ++  D  + + DC ELS+AI  
Sbjct: 1   MNFKDQVKELVNKALSEH-PELFLTDLSVGTDNTIRVTIDG-DKGVGIDDCIELSRAIEN 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E      + LEV+S G   P V +  + +  G  V    +      +   G + G 
Sbjct: 59  SLDRE---AMDFALEVTSFGATEPFVMERQYAKNAGRTVQITTLDG----KTHEGLLKGI 111

Query: 139 SETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARLI 173
           +E    +E E R  K + + +I        +   +   ++I
Sbjct: 112 AEGNVIIETETREPKPVGKGKITVKKEHLFALTDIKETKII 152


>gi|118617679|ref|YP_906011.1| hypothetical protein MUL_2119 [Mycobacterium ulcerans Agy99]
 gi|166987594|sp|A0PQC1|RIMP_MYCUA RecName: Full=Ribosome maturation factor rimP
 gi|118569789|gb|ABL04540.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 177

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 51/147 (34%), Gaps = 8/147 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++        +    + +           V   D  + L     LS++ S +LD  
Sbjct: 10  QVIELLGGEFARAGYEIEDVVIDHRARPPRITVVADGDTTLDLDTIAVLSRSASSLLDSL 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I   Y LEVSSPGIDRP+  +  F R  G  V   +   S     L G+I        
Sbjct: 70  DNIGDSYVLEVSSPGIDRPLTSEKHFRRARGPKVELTLADGSQ----LTGRIGALQSGSL 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            L      E  + E    I    +  A
Sbjct: 126 DLVVRAGREWKVRE----IPLAEVEKA 148


>gi|118473512|ref|YP_886961.1| hypothetical protein MSMEG_2624 [Mycobacterium smegmatis str. MC2
           155]
 gi|259585793|sp|A0QVM3|RIMP_MYCS2 RecName: Full=Ribosome maturation factor rimP
 gi|118174799|gb|ABK75695.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 181

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 10/150 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD-DGNMTLRDCEELSQAISPIL 80
              +  ++        +    + ++       +I +  D D  + L     LS+  S +L
Sbjct: 15  QKQVIELLDGEFARAGYEIDDV-VVNAATRPARITIVADGDKGLDLDAVAMLSRLASGLL 73

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D  +  +  Y LEV+SPG+DRP+  +  F R  G      +   S     L  ++ GT  
Sbjct: 74  DTVDTGDTPYVLEVTSPGVDRPLTTEKHFRRARGRKAELSLADGS----SLTARLGGTDG 129

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               +   +  +  +      I    +  A
Sbjct: 130 DQVNVVVAQGKDFAVR----QIPLREITKA 155


>gi|224025209|ref|ZP_03643575.1| hypothetical protein BACCOPRO_01943 [Bacteroides coprophilus DSM
           18228]
 gi|224018445|gb|EEF76443.1| hypothetical protein BACCOPRO_01943 [Bacteroides coprophilus DSM
           18228]
          Length = 155

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 16/156 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +I+ V+   +E+  +  V + +  +  ++++  ++  D  + + DC  LS+ +   L 
Sbjct: 4   KQEITDVVNKWLEDKEYFLVDVQISADSRIVVE--IDHRD-GVWIDDCVNLSRYLEETLG 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
                 G Y LEV S G+ +P      +    G  V           +KL G +   SE 
Sbjct: 61  ERL---GDYELEVGSAGLGQPFKVLRQYEAHVGSSVEVCTKDG----RKLHGVLQSASEE 113

Query: 142 GFFLEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           GF L  E R   +        E ++  ++D +   +
Sbjct: 114 GFTLLTEVRERPEGAKRPRWVEHELHFTYDEIKYTK 149


>gi|315656400|ref|ZP_07909289.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315492959|gb|EFU82561.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 159

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 16/154 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDD--GNMTLRDCEELSQAISPI 79
             I  V+ PV+E       +I++   K+  ++ I ++  D   N+     E+ S+AI   
Sbjct: 2   EAIIQVVNPVVEAAGLYLEKIAVTGPKHQRVVAINLDLPDGVDNLGSAQLEDASRAIGAA 61

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD  + + G Y LE+S+ G +  +       R  G  V           Q   G +   +
Sbjct: 62  LDAADPLSGAYTLEISTLGAEHELTNLRLARRALGKDVEVRT-----GGQVRAGILTEVT 116

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
           ETG  +  +               F+ + S R +
Sbjct: 117 ETGLSVNDDGDVTVY--------PFEDIESVRTV 142


>gi|41409008|ref|NP_961844.1| hypothetical protein MAP2910c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|51316952|sp|Q73VV1|RIMP_MYCPA RecName: Full=Ribosome maturation factor rimP
 gi|41397367|gb|AAS05227.1| hypothetical protein MAP_2910c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 178

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 8/147 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++        +    + +           +   D  + L     LS++ S +LD  
Sbjct: 10  QVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSRSASALLDKL 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + IE HY LEVSSPG+DRP+     F R  G  V   +  +S     + G++  T +   
Sbjct: 70  DTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKVDVVLSDNS----TVTGRVGETGDDTI 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            L          +     I    ++ A
Sbjct: 126 ALVV----RAGRDWAIREIPLGDVVKA 148


>gi|116073741|ref|ZP_01471003.1| hypothetical protein RS9916_34862 [Synechococcus sp. RS9916]
 gi|116069046|gb|EAU74798.1| hypothetical protein RS9916_34862 [Synechococcus sp. RS9916]
          Length = 155

 Score = 71.2 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDG-NMTLRDCEELSQAISPILD 81
           D++SV      +  F    + L    + + +Q+ + R  G ++TL DC  LS  +   ++
Sbjct: 8   DLTSVAAATAAQQGFELADLQLHTHLRPMTVQVQIRRPGGVDVTLDDCAGLSGPMGDAIE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +++   Y LE+SSPGI   +    DF  + G  V   I    G  Q L G ++  S+ 
Sbjct: 68  ASSLLTDAYVLEISSPGIGDLVQSDRDFQTFRGFPVEVTINEGDGPPQTLSGSLLDRSDN 127

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
              +  + R +K        I+  S+   RL
Sbjct: 128 HLEINMKGRIKK--------IARSSISCVRL 150


>gi|118464499|ref|YP_882873.1| hypothetical protein MAV_3696 [Mycobacterium avium 104]
 gi|166990891|sp|A0QIY5|RIMP_MYCA1 RecName: Full=Ribosome maturation factor rimP
 gi|118165786|gb|ABK66683.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 178

 Score = 71.2 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 8/147 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++        +    + +           +   D  + L     LS++ S +LD  
Sbjct: 10  QVIELLGGEFARAGYEIEDVVIDAHARPPRITVIADGDDGLDLDAAATLSRSASALLDKL 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + IE HY LEVSSPG+DRP+     F R  G  V   +  +S     + G++  T +   
Sbjct: 70  DTIEDHYVLEVSSPGVDRPLRTPKHFRRARGRKVDVVLSDNS----TVTGRVGETGDDTV 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            L          +     I    ++ A
Sbjct: 126 ALVV----RAGRDWAIREIPLGDVVKA 148


>gi|88807315|ref|ZP_01122827.1| hypothetical protein WH7805_12228 [Synechococcus sp. WH 7805]
 gi|88788529|gb|EAR19684.1| hypothetical protein WH7805_12228 [Synechococcus sp. WH 7805]
          Length = 155

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 2/130 (1%)

Query: 37  SFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
            F    I +L   + + +Q+ + R D  +++L DC   S+ +   L+ + ++   Y LE+
Sbjct: 21  GFELAGIQILTHLQPMTVQVQIRRSDGSDVSLDDCAGFSRPMGEALESQALLTEAYVLEI 80

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPGI   +    DF  +  + V      + G + +  G ++        +    R ++ 
Sbjct: 81  SSPGIGDQLQSDRDFQTFRSYPVEVLYRDNEGRELRQQGSLLERDNDHVHVNVRGRIKRI 140

Query: 155 MNELQIAISF 164
                I++  
Sbjct: 141 SRPSVISVQL 150


>gi|218264758|ref|ZP_03478470.1| hypothetical protein PRABACTJOHN_04179 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221807|gb|EEC94457.1| hypothetical protein PRABACTJOHN_04179 [Parabacteroides johnsonii
           DSM 18315]
          Length = 157

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           IS +++  +       V + +      L+ I ++ D+  + + DC ELS+ +   LD + 
Sbjct: 9   ISRLVEEKLASSGNYLVDVVIKPGN--LIIIEIDNDE-GVCIDDCAELSRYVEGHLDRD- 64

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                + LEV S GI  P      +++  G+ V   +   +    KL G +    E G  
Sbjct: 65  --VEDFELEVGSAGITSPFKVLRQYVKNIGNEVEMLLKSGT----KLTGVLKSADENGVV 118

Query: 145 LEKEKRGEKDMNELQIAI------SFDSLLSAR 171
           +  EK+ + +  + ++ +      +FD +   +
Sbjct: 119 VTVEKQVKPEGAKRKVTVQEDQSYTFDEIKYTK 151


>gi|300858701|ref|YP_003783684.1| hypothetical protein cpfrc_01284 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686155|gb|ADK29077.1| hypothetical protein cpfrc_01284 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206411|gb|ADL10753.1| Ribosome maturation factor rimP [Corynebacterium pseudotuberculosis
           C231]
 gi|302330967|gb|ADL21161.1| Ribosome maturation factor rimP [Corynebacterium pseudotuberculosis
           1002]
 gi|308276654|gb|ADO26553.1| Ribosome maturation factor rimP [Corynebacterium pseudotuberculosis
           I19]
          Length = 184

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 18/175 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             ++ +I P+    +     I +       L       D    L   E +S AIS + D 
Sbjct: 7   EVLTELITPIAAAHNMDLEHIRVNRAGKKTLVAISLDSDNRPDLDQLEVVSTAISELFDA 66

Query: 83  ENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +           Y LEV +PGID P+     +      +V  E       K+ +      
Sbjct: 67  QEASGALSFGPGYTLEVGTPGIDVPLTTARQWRGNRHRLVVLE----VEGKKSVERIGAV 122

Query: 138 TSETGFFLEKEKRGEK---------DMNELQIAISFDSLLSARLIVTDELLRASL 183
           + +    +  +++G K         +  +  + I F     A L  T     A+L
Sbjct: 123 SDDETRVIVVKRQGRKISVRSIELGENTQAVVEIEFAKPAEAELEFTQLDFDAAL 177


>gi|257457667|ref|ZP_05622834.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
 gi|257445053|gb|EEV20129.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
          Length = 186

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 12/143 (8%)

Query: 30  QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGH 89
           + ++  + ++ V + ++ +K+  L   V      + + DC ++ +A+    +V  +    
Sbjct: 53  EQLVTGLGYKLVDLQIVHQKSAWLVKAVIYSKNGVGIDDCSKVHRALLSRAEV-LLNSQD 111

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEK 149
            ++EVSSPG++R +   ++F  + G  +             L G+++    TG  L    
Sbjct: 112 IQMEVSSPGLNRVIKNAAEFQAFIGENIKVL---EVSCPDWLEGELLAADSTGIRLNISG 168

Query: 150 RGEKDMNELQIAISFDSLLSARL 172
                       I +  +  A+L
Sbjct: 169 EQRD--------IRYADIKKAKL 183


>gi|295132450|ref|YP_003583126.1| hypothetical protein ZPR_0573 [Zunongwangia profunda SM-A87]
 gi|294980465|gb|ADF50930.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
          Length = 154

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 76/164 (46%), Gaps = 18/164 (10%)

Query: 19  MGLAGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M L  ++  ++Q   EE +    + + +  +    +++ ++  D  +++ DC  +S+ + 
Sbjct: 1   MKLKENVEKLLQQAFEENNSLFLIDLMITSDNQ--IRVIIDG-DKGVSVEDCMYVSRKVE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E      + LEV+S G+  P+     + +  G  +  +        +K  G ++ 
Sbjct: 58  HNLDREE---EDFSLEVTSAGVSEPLQIPRQYKKNIGRKLQVKTEN-----EKFEGNLID 109

Query: 138 TSETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARLIVT 175
            +E+   L+ + R  K + + ++       +++ +++ A++++T
Sbjct: 110 ATESDIKLQWKAREPKPVGKGKVTVEKEAVLAYSAIVEAKVMIT 153


>gi|108799046|ref|YP_639243.1| hypothetical protein Mmcs_2079 [Mycobacterium sp. MCS]
 gi|119868161|ref|YP_938113.1| hypothetical protein Mkms_2125 [Mycobacterium sp. KMS]
 gi|126434649|ref|YP_001070340.1| hypothetical protein Mjls_2062 [Mycobacterium sp. JLS]
 gi|123070305|sp|Q1BA97|RIMP_MYCSS RecName: Full=Ribosome maturation factor rimP
 gi|259585794|sp|A3PY72|RIMP_MYCSJ RecName: Full=Ribosome maturation factor rimP
 gi|259585795|sp|A1UER5|RIMP_MYCSK RecName: Full=Ribosome maturation factor rimP
 gi|108769465|gb|ABG08187.1| protein of unknown function DUF150 [Mycobacterium sp. MCS]
 gi|119694250|gb|ABL91323.1| protein of unknown function DUF150 [Mycobacterium sp. KMS]
 gi|126234449|gb|ABN97849.1| protein of unknown function DUF150 [Mycobacterium sp. JLS]
          Length = 192

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 58/168 (34%), Gaps = 14/168 (8%)

Query: 12  EPRIFGDMGL--AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDC 69
           EP++    GL     +  ++        +    + +           V   D  + L   
Sbjct: 4   EPKL-RPTGLPSQEQVKELLDGEFARAGYEIENVVIDGGARPPRITVVVDGDRPLDLDTV 62

Query: 70  EELSQAISPILDVENIIEG-------HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
             LS++ S  LD  +            Y LEV+SPG+DRP+  +  + R  G  V   + 
Sbjct: 63  ASLSRSASEQLDRVDESGPGVTADAATYVLEVTSPGVDRPLTTEKHYRRARGRKVELTLS 122

Query: 123 LSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
             S     L G+I   +  G  +    R     N     +  + ++ A
Sbjct: 123 DGSQ----LTGRIGALTADGESVSLVVREGARANFSVRELPLEGIVKA 166


>gi|332292193|ref|YP_004430802.1| protein of unknown function DUF150 [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170279|gb|AEE19534.1| protein of unknown function DUF150 [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 154

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 68/160 (42%), Gaps = 17/160 (10%)

Query: 21  LAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +++++Q  ++E  S   + + +       ++I ++  D  +T+ DC  +S+ +   
Sbjct: 2   LKEKVTNLLQEALDENPSLFLISLDIQGNNE--VKIIIDG-DSGVTVEDCMAVSRKVEHN 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E      + LEV S G   P+     + +  G  +  +        +K+ G +   +
Sbjct: 59  LDREE---EDFSLEVMSAGATSPLEIPRQYKKNIGRHLEVKTQDG----EKIEGLMTEAT 111

Query: 140 ETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLI 173
           +    L  + R  K + + ++         ++ ++ A+++
Sbjct: 112 DAEITLTWKTREPKPVGKGKVTVEKIETFPYNEIVQAKVM 151


>gi|78184172|ref|YP_376607.1| hypothetical protein Syncc9902_0595 [Synechococcus sp. CC9902]
 gi|78168466|gb|ABB25563.1| conserved hypothetical protein [Synechococcus sp. CC9902]
          Length = 166

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 53/148 (35%), Gaps = 10/148 (6%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPILDVEN 84
            + Q V     F    I LL     + LQ+ +      ++ L DC   S  +   L+   
Sbjct: 22  QLTQRVAGLQGFELCGIQLLTHMNPITLQVQIRHTSGSDVNLDDCAGFSGVLGEALEESQ 81

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +   Y LE+SSPGI   +    DF  + G  V          + +L G +   +     
Sbjct: 82  QLVEAYVLEISSPGIGEQLSCDRDFQTFRGFPVDVTHRDQGNVEHRLEGLLHERNTDSLQ 141

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    R +        +I  D ++  RL
Sbjct: 142 INIRGRIK--------SIPRDQVIEVRL 161


>gi|116071182|ref|ZP_01468451.1| hypothetical protein BL107_16090 [Synechococcus sp. BL107]
 gi|116066587|gb|EAU72344.1| hypothetical protein BL107_16090 [Synechococcus sp. BL107]
          Length = 166

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 53/148 (35%), Gaps = 10/148 (6%)

Query: 27  SVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPILDVEN 84
            + Q V     F    I LL     + LQ+ +   +  ++ L DC   S  +   L+   
Sbjct: 22  QLTQRVAGLQGFELCGIQLLTHLNPITLQVQIRHTNGSDVNLDDCAGFSGVLGEALEESQ 81

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
            +   Y LE+SSPGI   +    DF  + G  V          +  L G +   +     
Sbjct: 82  QLIEAYVLEISSPGIGEQLSCDRDFQTFRGFPVDVTHRDQGNVEHHLEGLLHERNTDSLQ 141

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSARL 172
           +    R +        +I  D ++  RL
Sbjct: 142 INIRGRIK--------SIPRDQVIEVRL 161


>gi|304383856|ref|ZP_07366313.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
 gi|304334934|gb|EFM01207.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
          Length = 155

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 58/142 (40%), Gaps = 10/142 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + + ++  +++  +  V I +  +  ++++  ++  D  + + DC  LS+ I   L  + 
Sbjct: 7   VKAFVEEWLQDKEYFLVDIEISSDNRIVVE--IDHAD-GVWIEDCAALSRFIEEHLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V            K  G +   +   F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVAQQYINFIGKEVEVLDTEGM----KYTGILKHVTGNDFV 116

Query: 145 LEKEKRGEKDMNELQIAISFDS 166
           +   ++ +++  +  I +  D 
Sbjct: 117 ITVREKQKQEGKKRPIWVDVDK 138


>gi|303235788|ref|ZP_07322395.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
 gi|302484235|gb|EFL47223.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
          Length = 155

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E+  +  V I L  +    + I ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKKLVEEWLEDKEYFLVDIQLSPDSR--IVIEIDHAD-GVWIEDCVELSKFIEEHLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V           +K+ G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVPQQYINFIGKEVEVLDKEG----RKVKGILKSVEGDDFV 116

Query: 145 LEKEKRGEKDMNELQIAISFD 165
           +   ++ + +  +  + +  D
Sbjct: 117 VSVNEKVQVEGKKRPVKMDVD 137


>gi|120403302|ref|YP_953131.1| hypothetical protein Mvan_2311 [Mycobacterium vanbaalenii PYR-1]
 gi|259585796|sp|A1T7H5|RIMP_MYCVP RecName: Full=Ribosome maturation factor rimP
 gi|119956120|gb|ABM13125.1| protein of unknown function DUF150 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 176

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 9/149 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +  ++        +    + +           V   D  + L    ELS+  S +LD
Sbjct: 11  QRQVVELLDGEFTRAGYDLEDVVIDAASRPPRITVVTDSDHGLDLDSVAELSRIASELLD 70

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEV+SPG+DRP+  +  + R  G +    +   S     L G+I G ++ 
Sbjct: 71  GLDSAP--YVLEVTSPGVDRPLTTEKHYRRARGRLAEITLTDGS----VLTGRIGGVADG 124

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              +      E   N     I+ +++  A
Sbjct: 125 TVGVVV---REGRSNLSVREIALNAIAKA 150


>gi|320334651|ref|YP_004171362.1| ribosome maturation factor rimP [Deinococcus maricopensis DSM
           21211]
 gi|319755940|gb|ADV67697.1| Ribosome maturation factor rimP [Deinococcus maricopensis DSM
           21211]
          Length = 147

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 7/127 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDV 82
           +  +    +  + +  +++ L    +   L + ++R D+  +T+ D E  S+ +   LD 
Sbjct: 4   LEQLATEALSPLGYEVLEVHLQNPGRRPTLLVRIDRLDEQPVTVDDLETASKLLGLELDR 63

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + I+G YRLE+ SPG  RP+ R   F R  G           G+       I+      
Sbjct: 64  TDPIKGEYRLELESPGSKRPLRRTRHFERMVGLKARVR-----GEGHSFTAPILKVEGDL 118

Query: 143 FFLEKEK 149
              +   
Sbjct: 119 VTFDAPG 125


>gi|254482605|ref|ZP_05095844.1| conserved hypothetical protein [marine gamma proteobacterium
           HTCC2148]
 gi|214037296|gb|EEB77964.1| conserved hypothetical protein [marine gamma proteobacterium
           HTCC2148]
          Length = 90

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I G Y LEVSSPG+DR + + + +  + G ++   +  +   ++K  G + G 
Sbjct: 1   MLDVEDPITGEYTLEVSSPGMDRLLFQLTQYPAYVGEIIELRLRSAFEGRRKFKGVLKGI 60

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                 ++ +          +  +   ++  AR+
Sbjct: 61  EGEDVVIQVDN--------HEYLLPHSAIEKARV 86


>gi|295395323|ref|ZP_06805526.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971826|gb|EFG47698.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 153

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 61/158 (38%), Gaps = 17/158 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERD---DGNMTLRDCEELSQAIS 77
           A  ++ +I+  + +       +      +   + + ++ D      ++L    + ++ +S
Sbjct: 5   AQQVTDLIRTPLSQAGLIVEDVKAHAAGQYRKVTVVIDLDTDTSDPVSLDTIAQATKIVS 64

Query: 78  PILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            ++D   +     Y LEV+SPG  R +  K  FLR  G  +               G+++
Sbjct: 65  ELIDDVELFNDKPYDLEVTSPGATRELTAKRHFLRNRGRNLDVRTNGP-----TYTGELV 119

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             ++ G  L   K+           I F  +  A++++
Sbjct: 120 DVTDKGITLMDTKKV-------DYVIPFSDITKAKVVL 150


>gi|297623579|ref|YP_003705013.1| hypothetical protein Trad_1348 [Truepera radiovictrix DSM 17093]
 gi|297164759|gb|ADI14470.1| protein of unknown function DUF150 [Truepera radiovictrix DSM
           17093]
          Length = 146

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 20/157 (12%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNM-TLRDCEELSQAI 76
           M L      +++P    + +  +++ +        + + ++R D  + T+ D E  +Q  
Sbjct: 1   MDLQRAAEQLLEP----LGYEVLELVVSGRGGKRNVLLRIDRRDRGVVTMEDVERATQVF 56

Query: 77  SPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
           S  LD  +  EG YRLEV SPG +RP+     F R++G +            +   G+++
Sbjct: 57  SLELDRLDPFEGAYRLEVESPGPERPLRTAEHFRRFSGLLAKVRAH-----GETFTGRVV 111

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
             S+     +   +           ++ + +  ARL 
Sbjct: 112 EVSDAQVTFDVHGQPR--------TLALEDI-QARLA 139


>gi|111023600|ref|YP_706572.1| hypothetical protein RHA1_ro06641 [Rhodococcus jostii RHA1]
 gi|123339654|sp|Q0S222|RIMP_RHOSR RecName: Full=Ribosome maturation factor rimP
 gi|110823130|gb|ABG98414.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 190

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 12/151 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              ++ +I  +++   +    +++    ++  ++I V+  D  + L     LS  IS + 
Sbjct: 6   KERVTELISDLVQRQGYDLEDVAVTLAGRHSAVRIMVDS-DAGLELDAVANLSHEISEVF 64

Query: 81  D-VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           D V +  E  Y LEV+SPGI RP+  +  + R  G     ++       + ++G+I    
Sbjct: 65  DSVSDFGESPYTLEVTSPGIGRPLTHERHWRRARGRRARIDLAH-----ETVVGRIGLLD 119

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
                +                ++   +  A
Sbjct: 120 GDSVAVVI----GSRTGPEVRRVALPDIQKA 146


>gi|283458509|ref|YP_003363137.1| hypothetical protein RMDY18_14850 [Rothia mucilaginosa DY-18]
 gi|283134552|dbj|BAI65317.1| uncharacterized protein conserved in archaea [Rothia mucilaginosa
           DY-18]
          Length = 223

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 13/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER---DDGNMTLRDCEELSQAIS 77
             +++  I PVI E S     + +     N  ++I V+       +++L    E+S AIS
Sbjct: 56  EEEVAEAIAPVISEFSLVLEGLKISGPAANRTVKITVDYTAERTDSLSLDSLAEISGAIS 115

Query: 78  PILDVENIIEGH--YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +  +    Y LEVSSPG  R +  +  + R    ++A      +      + ++
Sbjct: 116 SALDRADENDEFFPYELEVSSPGATRALTERRHWERARTRLIAVTAPDGTE----YLARL 171

Query: 136 MGTSETGFFL---EKEKRGEKDMNELQIAISFDSLLSARL 172
               + G  L   +  K+G+K+       + ++++ SA +
Sbjct: 172 HEVQDDGPVLARKKNTKKGQKESYHEPSLLPWENIASAHV 211


>gi|325269684|ref|ZP_08136297.1| hypothetical protein HMPREF9141_1507 [Prevotella multiformis DSM
           16608]
 gi|324988052|gb|EGC20022.1| hypothetical protein HMPREF9141_1507 [Prevotella multiformis DSM
           16608]
          Length = 183

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 13/151 (8%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +  D  +   + S++   +E   +  V I +  +  ++++  ++  D  + + DC ELS+
Sbjct: 28  LMIDKNV---VKSLVDEWLEGKEYFLVDIQISPDDKIVVE--IDHAD-GVWIEDCVELSR 81

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            I   L  +      Y LEV S G+ +P      +  + G  V           +K+ G 
Sbjct: 82  YIEDRLSRDE---EDYELEVGSAGLGQPFKVPQQYQNFIGKEVEVLDKDG----KKVKGV 134

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFD 165
           +       F +   ++   +  +  + +  D
Sbjct: 135 LKSVDGNDFVVAVNEKVHVEGKKRPVKMDVD 165


>gi|259586223|sp|A2C4N8|RIMP_PROM1 RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 11/152 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE--RDDGNMTLRDCEELSQAISPIL 80
           ++  +         F             L +Q+ +     D  +T+ DC  LSQ I   +
Sbjct: 8   ELKDLTAKSATNYGFDVTDFKMFTHLNPLSIQVNIRHKNPDKKVTIDDCSILSQYIDEAI 67

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              +I++  + LE+SS GI   +  + DF  + G  V          +Q+  G ++  ++
Sbjct: 68  QGSSILDQPFNLEISSEGISDFLTEEKDFQTFKGFPVEVSYQDLKKIEQQTNGLLLKRTD 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               + ++ + +         I  + ++  RL
Sbjct: 128 NELQINQKGKTQ--------RIPVEDVIQVRL 151


>gi|315225518|ref|ZP_07867328.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
 gi|314944462|gb|EFS96501.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
          Length = 155

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 15/161 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M     +  ++   + E         L    +  +++ ++  D  + + DC EL++AI  
Sbjct: 1   MNFKDQVKELVNKALSEH-PELFLTDLSVGADNTIRVTIDG-DKGVGIDDCIELNRAIEN 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E      + LEV+S G   P V +  + +  G  V    +      +   G + G 
Sbjct: 59  SLDRE---AMDFALEVTSFGATEPFVMERQYAKNAGRTVQVTTLDG----KTHEGVLKGI 111

Query: 139 SETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARLI 173
            E    LE E R  K + + +I        +   +   ++I
Sbjct: 112 VEGKAILETETREPKPVGKGKITVKKEHLFALTDIKETKVI 152


>gi|225012170|ref|ZP_03702607.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-2A]
 gi|225003725|gb|EEG41698.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-2A]
          Length = 154

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 17/163 (10%)

Query: 19  MGLAGDISSVIQPVIE-EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     + S+++  +E + S   + + +    +  + I ++  D  +TL+DC  +S+AI 
Sbjct: 1   MNFRSKVESLLEAALEEDQSLFLIDLKI--GSDNSIHITLDG-DQGVTLKDCVNVSRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E      + LEV+S G+  P++    +++  G  +  E +  S     L G +  
Sbjct: 58  HNLDREE---YDFSLEVASAGVGSPLLNSRQYIKNIGRKLRVESMEVS----TLEGTLTA 110

Query: 138 TSETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
                F LE ++R  K + + ++       +S+D +  A+++V
Sbjct: 111 ADNQAFTLEWKQREAKPVGKGKVTVTKQKTLSYDQISIAKVLV 153


>gi|320537772|ref|ZP_08037694.1| hypothetical protein HMPREF9554_02448 [Treponema phagedenis F0421]
 gi|320145362|gb|EFW37056.1| hypothetical protein HMPREF9554_02448 [Treponema phagedenis F0421]
          Length = 149

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 14/144 (9%)

Query: 30  QPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           + ++  + +R V +S +++K    +Q  V   +  + + DC ++ +A+ P L    +   
Sbjct: 16  ESLVNGLGYRLVNLSAVKQKAGWQIQAVVYS-EKGVGIDDCSKVHRALLPRL-EALLNSQ 73

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
              L+VSSPGI+R +    +F  + G  +A      S  +    G +  T+E    +E  
Sbjct: 74  DVSLQVSSPGINRNIKSTIEFAAFIGEAIAVWSAEISDWR---EGTLADTTEEAITIE-- 128

Query: 149 KRGEKDMNELQIAISFDSLLSARL 172
                   E   AIS+  +  A+L
Sbjct: 129 ------TKEGMAAISYADIKKAKL 146


>gi|254821856|ref|ZP_05226857.1| hypothetical protein MintA_18122 [Mycobacterium intracellulare ATCC
           13950]
          Length = 170

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 8/147 (5%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            +  ++        +    + +           +   D  + L     LS++ S +LD  
Sbjct: 10  QVIELLDAEFARAGYEIEDVVIDARTRPPRITVIADGDDGLDLDTAATLSRSASALLDDL 69

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I  HY LEVSS G+DRP+     F R  G  V   +   S     L G+I  T+E   
Sbjct: 70  DTIGDHYVLEVSSRGVDRPLTSAKHFRRARGRKVDLTLSDGS----TLTGRIGETNEDAV 125

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSA 170
            L          +     IS   ++ A
Sbjct: 126 ALVV----RTGRDWAIREISLGDVVKA 148


>gi|312880099|ref|ZP_07739899.1| protein of unknown function DUF150 [Aminomonas paucivorans DSM
           12260]
 gi|310783390|gb|EFQ23788.1| protein of unknown function DUF150 [Aminomonas paucivorans DSM
           12260]
          Length = 151

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 69/158 (43%), Gaps = 13/158 (8%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
               L   + +  + ++  + ++ + +  + E   L+L++ ++  +G ++L+DCE  ++ 
Sbjct: 1   MTSPLRPPLEAEFRKLVGGLGYQCLALEKVREGGRLVLRLTLD-VEGGISLQDCETAARE 59

Query: 76  ISPILDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           ++  LD  +      + LEVSSPG +RP+VR  D+ R+ G  +          K++++  
Sbjct: 60  VNAFLDEHDEAFSEPFFLEVSSPGPERPLVRLEDYRRFRGEWIRISWK---NGKKRVLCI 116

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
                +    L              + + +  +   RL
Sbjct: 117 DDVGEDGVVTLR-------SREGEVLQLPWTEIRRPRL 147


>gi|72382860|ref|YP_292215.1| hypothetical protein PMN2A_1022 [Prochlorococcus marinus str.
           NATL2A]
 gi|72002710|gb|AAZ58512.1| conserved hypothetical protein [Prochlorococcus marinus str.
           NATL2A]
          Length = 183

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 59/153 (38%), Gaps = 11/153 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE--RDDGNMTLRDCEELSQAISPIL 80
           ++  +         F             L +Q+ +     D  +T+ DC  LSQ I   +
Sbjct: 35  ELKVLTAKSATNYGFDVTDFKMFTHLNPLSIQVNIRHKNPDKKVTIDDCSILSQYIDEAI 94

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              +I++  + LE+SS GI   +  + DF  + G  V          +Q++ G ++  ++
Sbjct: 95  QGSSILDQPFNLEISSEGIGDFLTEEKDFQTFKGFPVEVSYQDLKKIEQQINGLLLKRTD 154

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               + ++ + +         I  + ++  RL 
Sbjct: 155 NELHINQKGKTQ--------RIPVEDVIQVRLA 179


>gi|255326387|ref|ZP_05367471.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
 gi|255296604|gb|EET75937.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296]
          Length = 223

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 13/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER---DDGNMTLRDCEELSQAIS 77
             +++  I PVI E S     + +     N  ++I V+       +++L    E+S AIS
Sbjct: 56  EEEVAEAIAPVISEFSLVLEGLKISGPAANRTVKITVDYTAERTDSLSLDSLAEISGAIS 115

Query: 78  PILDVENIIEGH--YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +  +    Y LEVSSPG  R +  +  + R    ++A      +      + ++
Sbjct: 116 SALDRADENDEFFPYELEVSSPGATRALTERRHWERARTRLIAVTAPDGTE----YLARL 171

Query: 136 MGTSETGFFL---EKEKRGEKDMNELQIAISFDSLLSARL 172
               + G  L   +  K+G+K+       + ++++ SA +
Sbjct: 172 HEVQDEGPVLARKKNTKKGQKESYHEPSLLPWENIASAHV 211


>gi|317125352|ref|YP_004099464.1| hypothetical protein Intca_2228 [Intrasporangium calvum DSM 43043]
 gi|315589440|gb|ADU48737.1| protein of unknown function DUF150 [Intrasporangium calvum DSM
           43043]
          Length = 197

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 76/188 (40%), Gaps = 23/188 (12%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVER------------DDGNMT 65
           M     I + I+P +  +      +++    K  ++++ V+                 ++
Sbjct: 1   MSTVEQIRATIEPALVSLGLVIDDLAVNQAGKRRMVRVLVDSDIAGLDPSDATSPVPPLS 60

Query: 66  LRDCEELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           L D  + ++A+S  LD  +++    Y LEVSSPG+ RP+  + DF R  G +V       
Sbjct: 61  LDDIADATRAVSTRLDDSDVMGSMPYVLEVSSPGVGRPLRSRHDFRRQVGRLVDVAHEGG 120

Query: 125 SGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRASLN 184
                 + G+++        L+      K     Q+ ++ DS+  A + V  E  RA + 
Sbjct: 121 -----SVTGRLIEVHPDRLVLQV--PATKKAAGHQLTLALDSVHQATVQV--EFKRAEVE 171

Query: 185 NYGSYAGL 192
                A L
Sbjct: 172 AAHPQAAL 179


>gi|254458920|ref|ZP_05072343.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
 gi|207084191|gb|EDZ61480.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
          Length = 149

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 23/160 (14%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QI------FVERDDGNMTLRDCEE 71
           M L  DI+S+++ V           +++ E +  + +I       V+     ++L  C  
Sbjct: 1   MSLESDINSLVKSV----DLELYDATVVSENDETIYRISVISKEIVDGKRSGISLDACVN 56

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           L+  ISP+LDV   + G YRLEV SPGI+R +     FL   G  ++  +     +K+K 
Sbjct: 57  LTHLISPLLDVTPPVSGDYRLEVGSPGIERKLSSLKHFLLSIGENISLLLT----NKEKY 112

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
            GK++   ++  FL           + ++ I F  +L A+
Sbjct: 113 KGKLVKVKDSKIFLNV--------GDEKVEIDFYEILKAK 144


>gi|150003920|ref|YP_001298664.1| hypothetical protein BVU_1353 [Bacteroides vulgatus ATCC 8482]
 gi|212692746|ref|ZP_03300874.1| hypothetical protein BACDOR_02244 [Bacteroides dorei DSM 17855]
 gi|237709442|ref|ZP_04539923.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724958|ref|ZP_04555439.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|254880839|ref|ZP_05253549.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|265754641|ref|ZP_06089693.1| UPF0090 protein [Bacteroides sp. 3_1_33FAA]
 gi|294775076|ref|ZP_06740605.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
 gi|319639849|ref|ZP_07994578.1| ribosome maturation factor rimP [Bacteroides sp. 3_1_40A]
 gi|166977921|sp|A6L028|RIMP_BACV8 RecName: Full=Ribosome maturation factor rimP
 gi|149932344|gb|ABR39042.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|212664682|gb|EEB25254.1| hypothetical protein BACDOR_02244 [Bacteroides dorei DSM 17855]
 gi|229436696|gb|EEO46773.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229456498|gb|EEO62219.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|254833632|gb|EET13941.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|263234755|gb|EEZ20323.1| UPF0090 protein [Bacteroides sp. 3_1_33FAA]
 gi|294451120|gb|EFG19591.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
 gi|317388513|gb|EFV69363.1| ribosome maturation factor rimP [Bacteroides sp. 3_1_40A]
          Length = 155

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           ++ ++   +E   +  V +++  +  ++++  ++  +  + + DC ELS+ I   LD E 
Sbjct: 7   VTRIVDEWLEGKDYFLVDVTVSPDDKIVVE--IDHAE-GVWIDDCVELSRYIESKLDREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +L   G  V           +KL G +   +E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYLIHIGKEVEILTKEG----KKLEGVLKDANEENFT 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  EK+ + +        E  I  ++D +   +
Sbjct: 117 VTIEKKVKPEGAKRPKLVEEDITFAYDEIKYTK 149


>gi|289643648|ref|ZP_06475761.1| protein of unknown function DUF150 [Frankia symbiont of Datisca
           glomerata]
 gi|289506539|gb|EFD27525.1| protein of unknown function DUF150 [Frankia symbiont of Datisca
           glomerata]
          Length = 221

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 14/163 (8%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
                   ++  ++ P +    F    +++    +  +   V   DG + L    E S+ 
Sbjct: 27  VRPSSARAELVRLLTPQLAARGFDLEDVTVSRAGSRSVVRVVVDRDGGVDLDAVAEASRV 86

Query: 76  ISPILDV--------ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD 127
            S +LD         +  + G Y LEVSSPG+DRP+V    + R  G +V+         
Sbjct: 87  ASAVLDAAETDPAAGDPPLAGPYVLEVSSPGVDRPLVAPRHWHRARGRLVSVRTRDG--- 143

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            ++L+G++  T E    L  E    +      + ISF  ++ A
Sbjct: 144 -RELLGRVRATDEQTAELVLEGG--RTAVGEVLRISFADVVRA 183


>gi|110639789|ref|YP_679999.1| hypothetical protein CHU_3420 [Cytophaga hutchinsonii ATCC 33406]
 gi|122966504|sp|Q11PK7|RIMP_CYTH3 RecName: Full=Ribosome maturation factor rimP
 gi|110282470|gb|ABG60656.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 167

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 17/167 (10%)

Query: 18  DMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           ++ +   +S ++Q   E      V I+     +    + +   D  + + +C E S+A+ 
Sbjct: 5   ELEIKTYVSDLLQERAE---LFLVDIAFSGTHSRRKILVILDKDSGILIDECGEFSRALG 61

Query: 78  PILDVENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            +++  N+   + Y LEVSSPG+DRP++    + R  G+ ++  +   +         + 
Sbjct: 62  NLIEENNLFGDNAYVLEVSSPGMDRPLLVSRQYKRRIGNTLSFLLNDGTQ----FDAVLE 117

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAIS---------FDSLLSARLIV 174
             SE G  +    +  K  N+ +  +          F+ +    LIV
Sbjct: 118 SVSEEGVVVMPAPQKVKKSNKKEAVVDVAIEPRKLRFEEIKKCNLIV 164


>gi|302338536|ref|YP_003803742.1| protein of unknown function DUF150 [Spirochaeta smaragdinae DSM
           11293]
 gi|301635721|gb|ADK81148.1| protein of unknown function DUF150 [Spirochaeta smaragdinae DSM
           11293]
          Length = 175

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 75/146 (51%), Gaps = 12/146 (8%)

Query: 29  IQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           ++P+IE + +++V+++  +      + + +   D  + L DCE++ +AI P L++  + +
Sbjct: 34  LEPIIEGLGYKTVEVAAKKTGSRHHVSVIISGRDSGIGLTDCEKVHKAILPRLEI-LLDD 92

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
               +EVSSPGI R +   ++F  + G +V   +   +     ++G+IM + E    +E 
Sbjct: 93  RDIYVEVSSPGISRNLKCGAEFGIFVGSLVRLLLEGENE---WIVGRIMESDERKVVIEM 149

Query: 148 EKRGEKDMNELQIAISFDSLLSARLI 173
               ++D         +D++  A+L+
Sbjct: 150 SDGKKEDYL-------YDTIRKAKLV 168


>gi|213962899|ref|ZP_03391159.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
 gi|213954556|gb|EEB65878.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
          Length = 155

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 15/161 (9%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M     +  ++   +           L    +  ++I ++  D  + + DC ELS+A+  
Sbjct: 1   MNFKDQVKELVDKALSNH-PELFLTDLTVGTDNTIRITIDG-DKGVCIDDCIELSRAVEG 58

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            LD E +    + LEV+S G   P V +  + +  G  V    +      +   G + G 
Sbjct: 59  ALDRETV---DFALEVTSFGATEPFVMERQYTKNAGRTVQITTLDG----KTHEGVLKGL 111

Query: 139 SETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARLI 173
            E    LE E R  K + + +I        +   +   ++I
Sbjct: 112 QEGKAVLETETREPKPVGKGKITVKKEQLFALTDIKETKVI 152


>gi|15609979|ref|NP_217358.1| hypothetical protein Rv2842c [Mycobacterium tuberculosis H37Rv]
 gi|15842383|ref|NP_337420.1| hypothetical protein MT2908 [Mycobacterium tuberculosis CDC1551]
 gi|31794019|ref|NP_856512.1| hypothetical protein Mb2867c [Mycobacterium bovis AF2122/97]
 gi|121638722|ref|YP_978946.1| hypothetical protein BCG_2862c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662683|ref|YP_001284206.1| hypothetical protein MRA_2865 [Mycobacterium tuberculosis H37Ra]
 gi|148824032|ref|YP_001288786.1| hypothetical protein TBFG_12857 [Mycobacterium tuberculosis F11]
 gi|167967195|ref|ZP_02549472.1| hypothetical protein MtubH3_03787 [Mycobacterium tuberculosis
           H37Ra]
 gi|215404814|ref|ZP_03416995.1| hypothetical protein Mtub0_14218 [Mycobacterium tuberculosis
           02_1987]
 gi|215412674|ref|ZP_03421392.1| hypothetical protein Mtub9_14980 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428281|ref|ZP_03426200.1| hypothetical protein MtubT9_18553 [Mycobacterium tuberculosis T92]
 gi|215431784|ref|ZP_03429703.1| hypothetical protein MtubE_14186 [Mycobacterium tuberculosis
           EAS054]
 gi|215447096|ref|ZP_03433848.1| hypothetical protein MtubT_14592 [Mycobacterium tuberculosis T85]
 gi|218754590|ref|ZP_03533386.1| hypothetical protein MtubG1_14629 [Mycobacterium tuberculosis GM
           1503]
 gi|219558859|ref|ZP_03537935.1| hypothetical protein MtubT1_16742 [Mycobacterium tuberculosis T17]
 gi|224991214|ref|YP_002645903.1| hypothetical protein JTY_2857 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798072|ref|YP_003031073.1| hypothetical protein TBMG_01130 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232937|ref|ZP_04926264.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254365488|ref|ZP_04981533.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551906|ref|ZP_05142353.1| hypothetical protein Mtube_15842 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260187858|ref|ZP_05765332.1| hypothetical protein MtubCP_17794 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260201973|ref|ZP_05769464.1| hypothetical protein MtubT4_18245 [Mycobacterium tuberculosis T46]
 gi|260206153|ref|ZP_05773644.1| hypothetical protein MtubK8_17835 [Mycobacterium tuberculosis K85]
 gi|289444393|ref|ZP_06434137.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448504|ref|ZP_06438248.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553370|ref|ZP_06442580.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289571030|ref|ZP_06451257.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575543|ref|ZP_06455770.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746640|ref|ZP_06506018.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751503|ref|ZP_06510881.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754950|ref|ZP_06514328.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289758962|ref|ZP_06518340.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763018|ref|ZP_06522396.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|294994067|ref|ZP_06799758.1| hypothetical protein Mtub2_06033 [Mycobacterium tuberculosis 210]
 gi|297635455|ref|ZP_06953235.1| hypothetical protein MtubK4_15097 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732454|ref|ZP_06961572.1| hypothetical protein MtubKR_15262 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526310|ref|ZP_07013719.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777126|ref|ZP_07415463.1| hypothetical protein TMAG_01041 [Mycobacterium tuberculosis
           SUMu001]
 gi|306781032|ref|ZP_07419369.1| hypothetical protein TMBG_02983 [Mycobacterium tuberculosis
           SUMu002]
 gi|306785670|ref|ZP_07423992.1| hypothetical protein TMCG_02090 [Mycobacterium tuberculosis
           SUMu003]
 gi|306789710|ref|ZP_07428032.1| hypothetical protein TMDG_00030 [Mycobacterium tuberculosis
           SUMu004]
 gi|306794343|ref|ZP_07432645.1| hypothetical protein TMEG_03985 [Mycobacterium tuberculosis
           SUMu005]
 gi|306798767|ref|ZP_07437069.1| hypothetical protein TMFG_00036 [Mycobacterium tuberculosis
           SUMu006]
 gi|306804613|ref|ZP_07441281.1| hypothetical protein TMHG_02045 [Mycobacterium tuberculosis
           SUMu008]
 gi|306807353|ref|ZP_07444021.1| hypothetical protein TMGG_02026 [Mycobacterium tuberculosis
           SUMu007]
 gi|306973242|ref|ZP_07485903.1| hypothetical protein TMJG_01830 [Mycobacterium tuberculosis
           SUMu010]
 gi|307080951|ref|ZP_07490121.1| hypothetical protein TMKG_03274 [Mycobacterium tuberculosis
           SUMu011]
 gi|307085546|ref|ZP_07494659.1| hypothetical protein TMLG_01328 [Mycobacterium tuberculosis
           SUMu012]
 gi|313659786|ref|ZP_07816666.1| ribosome maturation protein RimP [Mycobacterium tuberculosis KZN
           V2475]
 gi|54040615|sp|P67215|RIMP_MYCBO RecName: Full=Ribosome maturation factor rimP
 gi|54042962|sp|P67214|RIMP_MYCTU RecName: Full=Ribosome maturation factor rimP
 gi|166988534|sp|A1KMI5|RIMP_MYCBP RecName: Full=Ribosome maturation factor rimP
 gi|166988535|sp|A5U6J4|RIMP_MYCTA RecName: Full=Ribosome maturation factor rimP
 gi|254801565|sp|C1AFV6|RIMP_MYCBT RecName: Full=Ribosome maturation factor rimP
 gi|2078017|emb|CAB08448.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13882682|gb|AAK47234.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31619613|emb|CAD95052.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494370|emb|CAL72851.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601996|gb|EAY61006.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151001|gb|EBA43046.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506835|gb|ABQ74644.1| hypothetical protein MRA_2865 [Mycobacterium tuberculosis H37Ra]
 gi|148722559|gb|ABR07184.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774329|dbj|BAH27135.1| hypothetical protein JTY_2857 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319575|gb|ACT24178.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           1435]
 gi|289417312|gb|EFD14552.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421462|gb|EFD18663.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438002|gb|EFD20495.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289539974|gb|EFD44552.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544784|gb|EFD48432.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687168|gb|EFD54656.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692090|gb|EFD59519.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695537|gb|EFD62966.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710524|gb|EFD74540.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289714526|gb|EFD78538.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496104|gb|EFI31398.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214495|gb|EFO73894.1| hypothetical protein TMAG_01041 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326140|gb|EFP14991.1| hypothetical protein TMBG_02983 [Mycobacterium tuberculosis
           SUMu002]
 gi|308329670|gb|EFP18521.1| hypothetical protein TMCG_02090 [Mycobacterium tuberculosis
           SUMu003]
 gi|308333809|gb|EFP22660.1| hypothetical protein TMDG_00030 [Mycobacterium tuberculosis
           SUMu004]
 gi|308337335|gb|EFP26186.1| hypothetical protein TMEG_03985 [Mycobacterium tuberculosis
           SUMu005]
 gi|308340978|gb|EFP29829.1| hypothetical protein TMFG_00036 [Mycobacterium tuberculosis
           SUMu006]
 gi|308346276|gb|EFP35127.1| hypothetical protein TMGG_02026 [Mycobacterium tuberculosis
           SUMu007]
 gi|308348793|gb|EFP37644.1| hypothetical protein TMHG_02045 [Mycobacterium tuberculosis
           SUMu008]
 gi|308357360|gb|EFP46211.1| hypothetical protein TMJG_01830 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361313|gb|EFP50164.1| hypothetical protein TMKG_03274 [Mycobacterium tuberculosis
           SUMu011]
 gi|308364914|gb|EFP53765.1| hypothetical protein TMLG_01328 [Mycobacterium tuberculosis
           SUMu012]
 gi|323718541|gb|EGB27711.1| hypothetical protein TMMG_03713 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326904455|gb|EGE51388.1| hypothetical protein TBPG_02361 [Mycobacterium tuberculosis W-148]
 gi|328457845|gb|AEB03268.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           4207]
          Length = 183

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +  ++        +    + +           +   D  + L     LS+  S +LD
Sbjct: 8   QRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASALLD 67

Query: 82  VEN---IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
             +    I G Y LEVSSPG++RP+  +  F R  G  V   +   S    +L G++   
Sbjct: 68  GLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGS----RLTGRVGEM 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
                 L       +D       I    ++ A
Sbjct: 124 RAGTVALVI----REDRGWAVREIPLAEIVKA 151


>gi|325282975|ref|YP_004255516.1| Ribosome maturation factor rimP [Deinococcus proteolyticus MRP]
 gi|324314784|gb|ADY25899.1| Ribosome maturation factor rimP [Deinococcus proteolyticus MRP]
          Length = 150

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 15/138 (10%)

Query: 38  FRSVQISLLEE-KNLLLQIFVER-DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
           +  +++ +       +L + ++R D+  +++ D E  ++ +S  LD  + I G YRLEV 
Sbjct: 19  YELLEVQMQNASGRPVLLVRIDRADEQPVSVDDIERATRRLSLWLDEADPIGGEYRLEVE 78

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDM 155
           SPG  RP++R   F R  G           G +      I   S      +   +G    
Sbjct: 79  SPGAKRPLLRTRHFERMLGLKAKVR-----GGEHAFTAPIKAVSGETVTFDVPGQG---- 129

Query: 156 NELQIAISFDSLLSARLI 173
               + +    +  A L 
Sbjct: 130 ---DVTLRIADI-KANLA 143


>gi|307565720|ref|ZP_07628189.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
 gi|307345546|gb|EFN90914.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
          Length = 155

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V I +  E  ++++  ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKKLVSEWLEGKEYFLVDIQISSENKIVVE--IDHAD-GVWIEDCVELSKYIEEHLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V           +K+ G +       F 
Sbjct: 64  A---DYELEVGSAGLGQPFKVAQQYINFIGKEVEVLDKEG----KKVKGLLKSVDGDEFI 116

Query: 145 LEKEKRGEKDMNELQIAISFD 165
           +   ++   +  +  + +  D
Sbjct: 117 VAVNEKVRIEGKKRPVKMDVD 137


>gi|123969227|ref|YP_001010085.1| hypothetical protein A9601_16951 [Prochlorococcus marinus str.
           AS9601]
 gi|166980197|sp|A2BT67|RIMP_PROMS RecName: Full=Ribosome maturation factor rimP
 gi|123199337|gb|ABM70978.1| DUF150 [Prochlorococcus marinus str. AS9601]
          Length = 155

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 65/145 (44%), Gaps = 2/145 (1%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPI 79
              + ++++ V  E       +++   +  ++++I + + +  +++L DC   +   S  
Sbjct: 6   KSKLEALLEKVANERDLEICGLNIQTNQNPVVIEITIRKTNGDDISLDDCALFNTPASDE 65

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           ++  N++   Y LE+SS G+   +  + DF  + G  V  E+   +   + L G +   S
Sbjct: 66  IEKSNLLNCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSKIKILNGLLYEKS 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISF 164
           +    +  + + +K   +  + IS 
Sbjct: 126 KDYLAINIKGKIKKIPFDEVLKISL 150


>gi|327313034|ref|YP_004328471.1| hypothetical protein HMPREF9137_0747 [Prevotella denticola F0289]
 gi|326946205|gb|AEA22090.1| conserved hypothetical protein [Prevotella denticola F0289]
          Length = 155

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + S++   +E   +  V I +  +  ++++  ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKSLVDEWLEGKEYFLVDIQISPDDKIVVE--IDHAD-GVWIEDCVELSRYIEDRLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      +  + G  V           +K+ G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVPQQYQNFIGKEVEVLDKDG----KKVKGVLKSVDGNDFV 116

Query: 145 LEKEKRGEKDMNELQIAISFD 165
           +   ++   +  +  + +  D
Sbjct: 117 VAVNEKVHVEGKKRPVKMDVD 137


>gi|325856505|ref|ZP_08172194.1| hypothetical protein HMPREF9303_1606 [Prevotella denticola CRIS
           18C-A]
 gi|325483474|gb|EGC86447.1| hypothetical protein HMPREF9303_1606 [Prevotella denticola CRIS
           18C-A]
          Length = 155

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 56/141 (39%), Gaps = 10/141 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + S++   +E   +  V I +  +  ++++  ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKSLVDEWLEGKEYFLVDIQISPDDKIVVE--IDHAD-GVWIEDCVELSRYIEDRLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      +  + G  V           +K+ G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVPQQYQNFIGKEVEVLDKDG----KKVKGVLKSVDGNDFV 116

Query: 145 LEKEKRGEKDMNELQIAISFD 165
           +   ++   +  +  + +  D
Sbjct: 117 VAVNEKVHVEGKKRPVKMDVD 137


>gi|306968906|ref|ZP_07481567.1| hypothetical protein TMIG_02342 [Mycobacterium tuberculosis
           SUMu009]
 gi|308353519|gb|EFP42370.1| hypothetical protein TMIG_02342 [Mycobacterium tuberculosis
           SUMu009]
          Length = 183

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +  ++        +    + +           +   D  + L     LS+  S +LD
Sbjct: 8   QRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASALLD 67

Query: 82  VEN---IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
             +    I G Y LEVSSPG++RP+  +  F R  G  V   +   S    +L G++   
Sbjct: 68  GLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGS----RLTGRVGEM 123

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
                 L       +D       I    ++ A
Sbjct: 124 RAGTVALVI----REDRGWAVREIPLAEIVKA 151


>gi|163786552|ref|ZP_02181000.1| hypothetical protein FBALC1_15242 [Flavobacteriales bacterium
           ALC-1]
 gi|159878412|gb|EDP72468.1| hypothetical protein FBALC1_15242 [Flavobacteriales bacterium
           ALC-1]
          Length = 154

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 68/155 (43%), Gaps = 17/155 (10%)

Query: 25  ISSVIQPVI-EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           +  ++Q  + E      +  +L  +    ++I ++  D  + + DC  +S+AI   +D +
Sbjct: 6   VEDLLQNALDERQDLFLIDFTLSGDNA--IKIVIDG-DNGVLVEDCMYISRAIEHNIDRD 62

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
                 + LEV S G   P+     + +  G  +  +      D Q L GK++  +E G 
Sbjct: 63  E---HDFSLEVLSSGATTPLTLPRQYKKHIGRDLEVKT----NDSQSLEGKLIDVNEQGV 115

Query: 144 FLEKEKRGEKDMNELQIA------ISFDSLLSARL 172
            L  + R  K + + ++       ++F+++  A++
Sbjct: 116 VLTWKAREPKPVGKGKVTVTKEANVTFENIKEAKV 150


>gi|282859023|ref|ZP_06268159.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
 gi|282588191|gb|EFB93360.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
          Length = 155

 Score = 68.1 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E+  +  V I +  +  ++++  ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKKLVDEWLEDKDYFLVDIQISSDDKIVVE--IDHAD-GVWIEDCVELSKYIEEHLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      +  + G  V           +K+ G +       F 
Sbjct: 64  A---DYELEVGSAGLGQPFKVPQQYENFVGKEVEVLDKDG----KKIKGILKSVDGDNFI 116

Query: 145 LEKEKRGEKDMNELQIAISFD 165
           +   ++ + +  +  I +  D
Sbjct: 117 VAVNEKVQVEGKKRPIKMDVD 137


>gi|120434525|ref|YP_860221.1| hypothetical protein GFO_0156 [Gramella forsetii KT0803]
 gi|166979794|sp|A0LXP9|RIMP_GRAFK RecName: Full=Ribosome maturation factor rimP
 gi|117576675|emb|CAL65144.1| protein containing DUF150 [Gramella forsetii KT0803]
          Length = 153

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 67/162 (41%), Gaps = 18/162 (11%)

Query: 21  LAGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  + + V EE +    + + +    +  ++I ++ D+  +++ DC  +S+ I   
Sbjct: 2   LKEKVEKLAEKVFEENNSLFLISLDINSANH--IKIVLDGDE-GVSVNDCIMVSRGIEHN 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E      + LEV+S G+  P+     + +  G  +  +         K    ++   
Sbjct: 59  LDREE---EDFSLEVTSAGVSEPLSMPRQYKKNIGRRLQVKTEND-----KFEADLLSAD 110

Query: 140 ETGFFLEKEKRGEKDMNE------LQIAISFDSLLSARLIVT 175
           +    L  + R  K + +       ++ + +  ++ A++ +T
Sbjct: 111 QNEIKLSWKAREPKPVGKGKVTVQKEVVLPYTDIVEAKVKIT 152


>gi|281422607|ref|ZP_06253606.1| conserved hypothetical protein [Prevotella copri DSM 18205]
 gi|281403277|gb|EFB33957.1| conserved hypothetical protein [Prevotella copri DSM 18205]
          Length = 155

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 58/136 (42%), Gaps = 10/136 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +++  +  V I +  +  ++++  ++  D  + + DC  LS+ I   L+ + 
Sbjct: 7   VKKLVEEWLQDKEYFLVSIEISPDDRIVVE--IDHAD-GVWIEDCVALSKYIEDHLNRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V           +K+ G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVPQQYINFIGKEVEVLDADG----KKVKGILKAVEGNDFT 116

Query: 145 LEKEKRGEKDMNELQI 160
           +  E++ + +  +  +
Sbjct: 117 VGVEEKVKVEGKKRPV 132


>gi|15806797|ref|NP_295519.1| hypothetical protein DR_1796 [Deinococcus radiodurans R1]
 gi|34223164|sp|Q9RTG8|RIMP_DEIRA RecName: Full=Ribosome maturation factor rimP
 gi|6459574|gb|AAF11352.1|AE002021_1 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 158

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 3/129 (2%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVER-DDGNMTLRDCEELSQAISPILDV 82
           +  +    +  + F  ++++   E   L++ + ++R D+  +T+ D    S+A     D 
Sbjct: 11  LFDLADGAVRPLGFEVLEVTQQREGRDLIVLVRIDRLDEQPVTMDDLTAASRAAEAEFDR 70

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + IE  YRLE  SPG  RP++R   F R  G        L    +      I       
Sbjct: 71  VDPIEEEYRLEFESPGGKRPLLRARHFERMIGLKAKVR-SLPGRGEHNFTAPIKAVEGDT 129

Query: 143 FFLEKEKRG 151
              E     
Sbjct: 130 VTFEHGGED 138


>gi|300774924|ref|ZP_07084787.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300506739|gb|EFK37874.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 155

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 65/163 (39%), Gaps = 18/163 (11%)

Query: 19  MGLAGDISSVIQPVIE-EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     I  ++   +E       + + +    ++ +   +   D  ++L+DC + S+AI 
Sbjct: 1   MEFRKRIEELLNEFLETRKDLFLIDLKISAGDDITV---ILDGDNGVSLQDCLDASRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E      + L+V S G+  P+     F +  G  +   +  SS    K+ G++  
Sbjct: 58  FNMDREE---HDFSLQVMSAGLSEPLSTPRQFSKNIGREIEVMLEDSS----KIEGELSK 110

Query: 138 TSETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLIV 174
             +    L    R  KD+ + ++       I +  +  A L+V
Sbjct: 111 VDDEKITLVLRYRKPKDIGKGKVDVEEEKEIPYSEIKKA-LVV 152


>gi|254494921|ref|ZP_01052530.2| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|213690503|gb|EAQ41958.2| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 176

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 23  GDISSVIQPVIE-EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             I  ++   +    S   + +++ E     +Q+ V+  D  + L +C  +S+ +   LD
Sbjct: 27  KKIKDLVDEALALNESLFLIDLTISENNK--IQVTVDG-DNGVPLSECIRISRNVEHNLD 83

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            E      + LEV++P I  P+  K  +++    ++  +        ++L G ++   + 
Sbjct: 84  REE---EDFSLEVTTPDISHPLKEKRQYVKNINRILKVKTAE-----EELEGTLVEADDE 135

Query: 142 GFFLEKEKRGEKDMNELQI------AISFDSLLSARL 172
              L  + R  K + + ++       +++  +  A++
Sbjct: 136 KIVLNWKAREPKPIGKGKVTVKKSATLTYTEIKEAKV 172


>gi|332298599|ref|YP_004440521.1| Ribosome maturation factor rimP [Treponema brennaborense DSM 12168]
 gi|332181702|gb|AEE17390.1| Ribosome maturation factor rimP [Treponema brennaborense DSM 12168]
          Length = 169

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 65/155 (41%), Gaps = 18/155 (11%)

Query: 31  PVIEEMSFRSVQISLLEEKNLLLQIFV-------ERDDGNMTLRDCEELSQAISPILDVE 83
           P++  + +  V++ ++ +   ++++         E     + + DC ++ +A+ P L+V 
Sbjct: 17  PLVAGLGYVLVELRVIPQHG-VIRVLAVISHPAGENSIALIGINDCAKVHRALLPRLEVV 75

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
            +      +EV+SPG++R +   ++F  + GH+V       +     + GKI+ +     
Sbjct: 76  -LNSQDIYMEVTSPGMERVIKNAAEFALFTGHLVRVWDSEVTD---WIAGKIVVSDTESV 131

Query: 144 FLE------KEKRGEKDMNELQIAISFDSLLSARL 172
            LE       +             I +  +  A+L
Sbjct: 132 TLEMIRTELVKGAEPSIGAPESKRIPYGRIAKAKL 166


>gi|218296561|ref|ZP_03497289.1| protein of unknown function DUF150 [Thermus aquaticus Y51MC23]
 gi|218243103|gb|EED09635.1| protein of unknown function DUF150 [Thermus aquaticus Y51MC23]
          Length = 141

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 8/124 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +E +    +++     +  +L     +D+  +T+ D E  S+ I  +LD E
Sbjct: 2   DLWQLVEEAVEPLDLEVLEVKEAPGE--VLVRLERKDEKPITVADLERASRHIEAVLDRE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G YRL V SPG  RP+  +  F R+ G              +  +G+I+       
Sbjct: 60  DPIPGSYRLLVESPGPKRPLFTRRHFERFQGLKAKV------PGPEGFVGRILRVEGDEV 113

Query: 144 FLEK 147
             + 
Sbjct: 114 VFQV 117


>gi|119632744|gb|ABL84379.1| unknown [Streptococcus suis]
          Length = 99

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           +     Y LEV+SPG++RP+       +  G  +  ++  +    +   G ++    T  
Sbjct: 11  DPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIHVKLYQAIDKIKVFEGTLLSFDGTDL 70

Query: 144 FLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            +E   +  K     ++ I + ++  ARL V
Sbjct: 71  IMEYMDKTRKK----EVTIPYQTVAKARLAV 97


>gi|320449996|ref|YP_004202092.1| 15 kDa protein [Thermus scotoductus SA-01]
 gi|320150165|gb|ADW21543.1| 15 kDa protein [Thermus scotoductus SA-01]
          Length = 141

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 8/130 (6%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           D+  +++  +E +    +++     +  +L     +D+  + + D E  S+AI  + D E
Sbjct: 2   DLWRLVEEAVEPLDLEVLEVKEAPGE--VLVRLERKDERPIRVADLERASRAIEAVFDQE 59

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
           + I G YRL V SPG  RP+  +  F R+ G              +   G+I+       
Sbjct: 60  DPIPGSYRLLVESPGPKRPLFTRRHFERFQGLKAKV------PGPEGFTGRILRVEGDEV 113

Query: 144 FLEKEKRGEK 153
             +  +  ++
Sbjct: 114 VFQVGQEEKR 123


>gi|288801647|ref|ZP_06407089.1| conserved hypothetical protein [Prevotella melaninogenica D18]
 gi|302344942|ref|YP_003813295.1| hypothetical protein HMPREF0659_A5169 [Prevotella melaninogenica
           ATCC 25845]
 gi|288335689|gb|EFC74122.1| conserved hypothetical protein [Prevotella melaninogenica D18]
 gi|302149852|gb|ADK96114.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 155

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + S++   +E   +  V I +  +  ++++  ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKSLVDEWLEGKEYFLVDIQISSDDKIVVE--IDHAD-GVWIEDCVELSKYIEDRLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      +  + G  V           +K+ G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVPQQYQNFIGKEVEVLGKDG----KKVKGILKSVDGNDFV 116

Query: 145 LEKEKRGEKDMNELQIAISFD 165
           +   ++ + +  +  + +  D
Sbjct: 117 VAVNEKVQVEGKKRPVKMDVD 137


>gi|309811524|ref|ZP_07705306.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
 gi|308434575|gb|EFP58425.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
          Length = 183

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 19/168 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERD----------DGNMTLRDCE 70
              I   I P +E +      ++++   K  L+++ V+RD             +TL +  
Sbjct: 5   EQTIIDTILPKLEPLGLLVEDVTVVPAGKRRLVRVLVDRDVALETAVEESIEPVTLDEVT 64

Query: 71  ELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + ++ I   L+  +++ E  Y LEVSSPG DRP+     F R  G +V   +     D+ 
Sbjct: 65  DATRVIDAELEASDVMGEQPYVLEVSSPGTDRPLTLPRHFARNVGRLVTVTL----DDES 120

Query: 130 KLIGKIMGTSETGFFLEKEKRGEK---DMNELQIAISFDSLLSARLIV 174
           K+ G+I         +  E+ G+K    ++     +++ S+  A++ V
Sbjct: 121 KVAGRITRADAQTVEVTPEQGGKKAGAAVDAEPARLNYTSITGAKVQV 168


>gi|255010120|ref|ZP_05282246.1| hypothetical protein Bfra3_13350 [Bacteroides fragilis 3_1_12]
 gi|313147918|ref|ZP_07810111.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136685|gb|EFR54045.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 155

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 64/158 (40%), Gaps = 17/158 (10%)

Query: 21  LAGD-ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +    +  +++  +E   +  V++++  +  ++++  ++  +  + + DC ELS+ I   
Sbjct: 2   IEKRTVCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRFIESK 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L+ E      Y LEV S GI +P      +    G  V           +KL G +    
Sbjct: 59  LNREE---EDYELEVGSAGIGQPFKVLQQYYNHIGLEVEVLTK----GGRKLSGVLKDAD 111

Query: 140 ETGFFLEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           E  F +  +K+ + +        E     ++D +   +
Sbjct: 112 EEKFVVTVQKKVKPEGAKRPQLVEEDETFTYDDIKYTK 149


>gi|262202084|ref|YP_003273292.1| hypothetical protein Gbro_2150 [Gordonia bronchialis DSM 43247]
 gi|262085431|gb|ACY21399.1| protein of unknown function DUF150 [Gordonia bronchialis DSM 43247]
          Length = 179

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 11/149 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +++ +++ V+ +  F    + +          + V+R DG   L    ELS  I  +LD 
Sbjct: 7   ELNDLVEKVVTDRGFDLEDVVVRRRDGRDEFSVVVDR-DGGSDLDVLAELSTEIGEVLDA 65

Query: 83  ENIIEGH-YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
              +    Y LEV+SPGIDRP+     + R  G  V  E          ++G++   S  
Sbjct: 66  VPALADAAYTLEVTSPGIDRPLTAPRHWRRALGRRVRIE----RDGSDAVVGRVGQVSGD 121

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              +    +G   +      + FDS+  A
Sbjct: 122 DVAIVVNHKGRLAVE----TVGFDSVTRA 146


>gi|281424956|ref|ZP_06255869.1| conserved hypothetical protein [Prevotella oris F0302]
 gi|281400800|gb|EFB31631.1| conserved hypothetical protein [Prevotella oris F0302]
          Length = 155

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 58/153 (37%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   + +  +  V I +  +  ++++  ++  D  + + DC  LS+ I   L  + 
Sbjct: 7   VKKLVDEWLADKEYFLVGIDISPDDKIVVE--IDHAD-GVWIEDCVALSKYIEDRLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V         D +K  G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVMQQYVNFIGKEVEV----MDADGKKFQGVLKSVDGNDFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSAR 171
                 ++ E +      ++  A   D++   +
Sbjct: 117 VTVNEKVKVEGKKRPQKMDVDHAFKMDNVKYTK 149


>gi|91207995|sp|Q46J16|RIMP_PROMT RecName: Full=Ribosome maturation factor rimP
          Length = 156

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 59/153 (38%), Gaps = 11/153 (7%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVE--RDDGNMTLRDCEELSQAISPIL 80
           ++  +         F             L +Q+ +     D  +T+ DC  LSQ I   +
Sbjct: 8   ELKVLTAKSATNYGFDVTDFKMFTHLNPLSIQVNIRHKNPDKKVTIDDCSILSQYIDEAI 67

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
              +I++  + LE+SS GI   +  + DF  + G  V          +Q++ G ++  ++
Sbjct: 68  QGSSILDQPFNLEISSEGIGDFLTEEKDFQTFKGFPVEVSYQDLKKIEQQINGLLLKRTD 127

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               + ++ + +         I  + ++  RL 
Sbjct: 128 NELHINQKGKTQ--------RIPVEDVIQVRLA 152


>gi|283769340|ref|ZP_06342239.1| conserved hypothetical protein [Bulleidia extructa W1219]
 gi|283103997|gb|EFC05381.1| conserved hypothetical protein [Bulleidia extructa W1219]
          Length = 150

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 3/146 (2%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78
           M    +I +++ P +++  F   +++ +  K   LQI V    G   L  C + S+ IS 
Sbjct: 1   MNRIDEIKALVVPALKKQGFEVEEVTWIS-KERTLQISVHNLQGETDLEACAKASECISD 59

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LD  +++   Y LEV SPG +R +             V  E   +    Q L G ++ T
Sbjct: 60  MLDENDLMLEGYTLEVCSPGAEREIQDIHSIQD--ESYVHVEFKEAMNHHQSLEGYLVPT 117

Query: 139 SETGFFLEKEKRGEKDMNELQIAISF 164
            E      +EK   K +   +  I+F
Sbjct: 118 QEGYELHYREKAVLKKVKLNEENIAF 143


>gi|297565904|ref|YP_003684876.1| hypothetical protein Mesil_1476 [Meiothermus silvanus DSM 9946]
 gi|296850353|gb|ADH63368.1| protein of unknown function DUF150 [Meiothermus silvanus DSM 9946]
          Length = 143

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)

Query: 27  SVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG-NMTLRDCEELSQAISPILDVEN 84
            V Q ++  M +  +++SL     + +L + +ER D   +++ + E  S+ +   LD  +
Sbjct: 2   EVAQDLLGPMGYDVLEVSLKGSGNSRVLTVRLERKDEVPISVEELERASRVLGSELDRLD 61

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           +IE  YRLEV SPG DRP++    F R+ G                  G+I G SE    
Sbjct: 62  LIESAYRLEVESPGPDRPLLTPRHFERFAGLKAKVRSPEG-----NFTGRIEGVSEDTVT 116

Query: 145 LEKEKR 150
               K 
Sbjct: 117 FLVGKE 122


>gi|53711552|ref|YP_097544.1| hypothetical protein BF0261 [Bacteroides fragilis YCH46]
 gi|60679811|ref|YP_209955.1| hypothetical protein BF0217 [Bacteroides fragilis NCTC 9343]
 gi|253564387|ref|ZP_04841844.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764944|ref|ZP_06093219.1| UPF0090 protein [Bacteroides sp. 2_1_16]
 gi|81317116|sp|Q5LIN3|RIMP_BACFN RecName: Full=Ribosome maturation factor rimP
 gi|81383870|sp|Q64ZR6|RIMP_BACFR RecName: Full=Ribosome maturation factor rimP
 gi|52214417|dbj|BAD47010.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60491245|emb|CAH05993.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|251948163|gb|EES88445.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263254328|gb|EEZ25762.1| UPF0090 protein [Bacteroides sp. 2_1_16]
 gi|301161334|emb|CBW20874.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 155

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 64/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E+  +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEDKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRFIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYYNHIGLEVEVLTK----GGRKLSGVLKDADEEKFV 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  +K+ + +        E     ++D +   +
Sbjct: 117 VTVQKKVKPEGAKRPQLVEEDETFTYDDIKYTK 149


>gi|260591779|ref|ZP_05857237.1| conserved hypothetical protein [Prevotella veroralis F0319]
 gi|260536063|gb|EEX18680.1| conserved hypothetical protein [Prevotella veroralis F0319]
          Length = 155

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + S++   +E   +  V I +  +  ++++  ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKSLVDEWLEGKEYFLVDIQISPDDKIVVE--IDHAD-GVWIEDCVELSKYIEDRLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      +  + G  V           +K+ G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVPQQYQNFIGKEVEVLDKDG----KKVKGVLKSVDGNDFI 116

Query: 145 LEKEKRGEKDMNELQIAISFD 165
           +   ++ + +  +  + +  D
Sbjct: 117 VAVNEKVQVEGKKRPVKMDVD 137


>gi|157414093|ref|YP_001484959.1| hypothetical protein P9215_17601 [Prochlorococcus marinus str. MIT
           9215]
 gi|166980224|sp|A8G6Z2|RIMP_PROM2 RecName: Full=Ribosome maturation factor rimP
 gi|157388668|gb|ABV51373.1| DUF150 [Prochlorococcus marinus str. MIT 9215]
          Length = 155

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 64/143 (44%), Gaps = 2/143 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPILD 81
            +  +++ V  E   +   I++   +   +++I +++ +  +++L DC   +   S  ++
Sbjct: 8   KLEILLKKVANEWDLKICSINIQTNQNPTVVKIIIKKTNGDDISLEDCALFNAPASEEIE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             N++   Y LE+SS G+   +    DF  + G  V  ++   +  K+ L G +   S  
Sbjct: 68  NSNLLNCSYVLEISSQGVSDELTSDRDFKTFKGFPVNVQLNQKNSKKKFLNGLLYEKSND 127

Query: 142 GFFLEKEKRGEKDMNELQIAISF 164
              +  + + +K   +  + IS 
Sbjct: 128 YLAINIKGKIKKIPFDEVLKISL 150


>gi|255692952|ref|ZP_05416627.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
 gi|260621263|gb|EEX44134.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565]
          Length = 155

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 60/153 (39%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRYIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           QKL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVMTK----GGQKLTGVLKHADEEKFT 116

Query: 145 LEK------EKRGEKDMNELQIAISFDSLLSAR 171
           +        E      + E     +++ +   +
Sbjct: 117 VSVQKKVKMEGAKRPKLVEEDETFTYEQIKYTK 149


>gi|86131974|ref|ZP_01050570.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85817308|gb|EAQ38488.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 154

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 70/160 (43%), Gaps = 17/160 (10%)

Query: 21  LAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +++++Q  ++E  +   + + +       ++I ++ DD  + + DC  +S+ +   
Sbjct: 2   LKEKVTNLLQEALDENPNLFLISLDIQGNNE--IKIIIDGDD-GVKVEDCIAVSRKVEHN 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E      + LEV S G   P+     + +  G      + +   D  K+ G +   +
Sbjct: 59  LDREE---EDFSLEVMSAGATSPLAIPRQYKKNVGR----HLEVKKEDGTKIEGLMTDAT 111

Query: 140 ETGFFLEKEKRGEKDMNELQI------AISFDSLLSARLI 173
           +T   L  + R  K + + ++       IS+  ++ A+++
Sbjct: 112 DTDVTLTWKTREPKPVGKGKVTVQKTETISYSEIVQAKVM 151


>gi|315928474|gb|EFV07784.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 114

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 29  IQPVIEEMSFRSVQISLLEEKNLLL-QIFVERD------DGNMTLRDCEELSQAISPILD 81
           ++ + +E++       L  E    + +++V +          + L DC  LS+ +SPI D
Sbjct: 3   LEALCKEVNLELYDSELTSENGKKIYRVYVMKPLDEKGERRGVNLDDCARLSEILSPIFD 62

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           VE  + G Y LEVSS G++R + +   F +    +V          KQK
Sbjct: 63  VEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVKITTGEKEKSKQK 111


>gi|300788186|ref|YP_003768477.1| hypothetical protein AMED_6341 [Amycolatopsis mediterranei U32]
 gi|299797700|gb|ADJ48075.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 168

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 9/142 (6%)

Query: 30  QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV-ENIIEG 88
              +    F      + +     L   V   D  + L +  E+S+ +S  LD  E+++  
Sbjct: 2   AEAVTAAGFDLDSFEVQQAGRRQLVKVVVDSDDGVGLDEIAEISRTVSATLDENEHVLAS 61

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFL--- 145
            Y LEV+SPG+DRP+ +   + R    +V       +      +G++    E    +   
Sbjct: 62  AYTLEVTSPGLDRPLTQPRHWRRARFRLVKI---SPAEGA-PFVGRVGHAGEDAARVLAG 117

Query: 146 -EKEKRGEKDMNELQIAISFDS 166
            +       D+ +  + I F  
Sbjct: 118 GKLRDVRYADVEKAVVEIEFKQ 139


>gi|318042327|ref|ZP_07974283.1| hypothetical protein SCB01_11489 [Synechococcus sp. CB0101]
          Length = 157

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 11/155 (7%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGN-MTLRDCEELSQAISP 78
           L  D+  +   V  +  F+   + LL  +  + L + +   DG  ++L +C   S  +  
Sbjct: 5   LIPDLERLASQVAADAGFQVCGVQLLTHRIPMTLLVQLRLADGGDVSLDNCASFSGVLGE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD-KQKLIGKIMG 137
            L+   +IE  Y LE+SSPGI   +    DF  + G  V      S    + +  G ++ 
Sbjct: 65  ALEAAALIEDAYVLEISSPGIAETLNDDRDFRSFRGFPVCVRYRDSKTGVEAEREGLLLE 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            ++    +    R         + +    +++ RL
Sbjct: 125 RTDDSVQINVRGR--------TVRLPRADVIAVRL 151


>gi|282881116|ref|ZP_06289803.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304920|gb|EFA96993.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
          Length = 155

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 58/135 (42%), Gaps = 10/135 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + +V++  +++  +  V I +  +  ++++  ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKAVVEEWLQDKEYFLVDIEVSPDDKIVVE--IDHVD-GVWIEDCVELSRYIESRLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V           +K+ G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVPQQYINFIGKEVEVLDRDG----KKVQGTLKSVDGNDFV 116

Query: 145 LEKEKRGEKDMNELQ 159
           +  +++ + +  +  
Sbjct: 117 VAVDEKVKIEGKKRP 131


>gi|307718806|ref|YP_003874338.1| hypothetical protein STHERM_c11200 [Spirochaeta thermophila DSM
           6192]
 gi|306532531|gb|ADN02065.1| hypothetical protein STHERM_c11200 [Spirochaeta thermophila DSM
           6192]
          Length = 182

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 16/166 (9%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEE 71
           PR          +     P++E+M +  V++ L        L+I +      +++ DC  
Sbjct: 25  PRAIR-TPEEEKLYQHFVPLLEKMGYALVELHLRYRRGGAALEIVIHGAH--LSVDDCAR 81

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           + + + P   +  +      +EV SPGIDR +  + +   + G  +      S   ++  
Sbjct: 82  VLRLLKPKAQLL-LDLADLHMEVMSPGIDRVLKNRDELALFVGKGLKLLDTRS---QRWE 137

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            G +   +E    L             + +I  DS+  A+L  T E
Sbjct: 138 GGILEAVTEDHVVLR--------KGAERRSIPIDSIGKAKLDFTQE 175


>gi|153809149|ref|ZP_01961817.1| hypothetical protein BACCAC_03459 [Bacteroides caccae ATCC 43185]
 gi|149128125|gb|EDM19345.1| hypothetical protein BACCAC_03459 [Bacteroides caccae ATCC 43185]
          Length = 155

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 64/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRYIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           QKL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVMTK----GGQKLTGILKDADEEKFT 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  +K+ + + +      E     +++ +   +
Sbjct: 117 VTVQKKVKLEGSKRPKLVEEDETFTYEQIKYTK 149


>gi|254526613|ref|ZP_05138665.1| hypothetical protein P9202_1265 [Prochlorococcus marinus str. MIT
           9202]
 gi|221538037|gb|EEE40490.1| hypothetical protein P9202_1265 [Prochlorococcus marinus str. MIT
           9202]
          Length = 155

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 64/143 (44%), Gaps = 2/143 (1%)

Query: 24  DISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPILD 81
            +  +++ V  E   +   +++   +   +++I +++ +  +++L DC   +   S  ++
Sbjct: 8   KLEILLKKVANEWDLKICSLNIQTNQNPTVVKITIKKTNGDDISLEDCALFNAPASEEIE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             N++   Y LE+SS G+   +    DF  + G  V  ++   +  K+ L G +   S  
Sbjct: 68  NSNLLNCSYVLEISSQGVSDELTSDRDFKTFKGFPVNVQLNQKNSKKKFLNGLLYEKSND 127

Query: 142 GFFLEKEKRGEKDMNELQIAISF 164
              +  + + +K   +  + IS 
Sbjct: 128 YLAINIKGKIKKIPFDEVLKISL 150


>gi|78776877|ref|YP_393192.1| hypothetical protein Suden_0678 [Sulfurimonas denitrificans DSM
           1251]
 gi|91208367|sp|Q30SS4|RIMP_SULDN RecName: Full=Ribosome maturation factor rimP
 gi|78497417|gb|ABB43957.1| Protein of unknown function DUF150 [Sulfurimonas denitrificans DSM
           1251]
          Length = 149

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 19/154 (12%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFV------ERDDGNMTLRDCEELSQAIS 77
           +   I+  ++ +     +IS+  + +  + ++ V      +     ++L +C  LS+ IS
Sbjct: 3   LEKDIESFVKSLDLELYEISVARDGDDSIYRVNVLSTQIEDGKKKGVSLDECVHLSRLIS 62

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           P+LDV   + G YRLEV +PGI+R +     F+   G  VA  +      K+KL G ++ 
Sbjct: 63  PLLDVTPPMSGEYRLEVGTPGIERKVSTLKQFVLSIGERVALTLKS----KEKLKGLLLR 118

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
             E+  +L+ +          ++ + F  +  A+
Sbjct: 119 VEESNIYLDVDAE--------EVCVEFAQISKAK 144


>gi|33241095|ref|NP_876037.1| hypothetical protein Pro1646 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|51316781|sp|Q7VA23|RIMP_PROMA RecName: Full=Ribosome maturation factor rimP
 gi|33238624|gb|AAQ00690.1| Uncharacterized YhbC family conserved protein [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 155

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 11/143 (7%)

Query: 37  SFRSVQISLLEE-KNLLLQIFVERDD-GNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94
            F  +++ +L + K + +Q+ +   +  +++L DC  LS+ I  +++   +I   Y LE+
Sbjct: 21  GFEIIRLEVLAQMKPMKIQLQIRHKNGSDVSLEDCSRLSRPIGEVIENSKLINQSYILEI 80

Query: 95  SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154
           SSPG+   +    +F  + G  +       S       G +   S+    +  + +  K 
Sbjct: 81  SSPGLSDILETDKEFATFKGFPIQVSTKNKSNSTILQNGLLHTKSKEHLLINIKGKMSK- 139

Query: 155 MNELQIAISFDSLLSARLI-VTD 176
                  I  D+++  RL   TD
Sbjct: 140 -------IPIDNVIQVRLASPTD 155


>gi|213964632|ref|ZP_03392832.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
 gi|213952825|gb|EEB64207.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
          Length = 190

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 8/154 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD- 81
             I   + P + ++      + ++        I +   D    L   E+ +  +S  LD 
Sbjct: 7   EKIEQFVSPALAQIGLDVEDVKVVRAGAKSQVIVLIDADERPDLDVLEQATHEVSSALDA 66

Query: 82  -----VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                  +     Y LEVS+PGID P+ +   + R  G +    +   S          +
Sbjct: 67  AEARGEADFGAQGYTLEVSTPGIDAPLTQPRHWRRNRGRIAEISLADGSA--IAARIGAL 124

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              E    L   K  +  +  +   +   ++  A
Sbjct: 125 SPDEESIILVTSKGPKGRLKAVGQRVQLTNVARA 158


>gi|325280550|ref|YP_004253092.1| Ribosome maturation factor rimP [Odoribacter splanchnicus DSM
           20712]
 gi|324312359|gb|ADY32912.1| Ribosome maturation factor rimP [Odoribacter splanchnicus DSM
           20712]
          Length = 153

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 67/156 (42%), Gaps = 16/156 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +I  +I+PV+ E     V++ +   K+ ++++FV+  +  + ++ C  +S+ I   L+
Sbjct: 3   TEEIKHLIEPVLTEHHLFLVELKIS--KDNVIEVFVDALE-GVNIQTCIAVSREIESSLN 59

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            +      + L VSS G+  P   +  + +  G  V  ++   +    KL G ++  +  
Sbjct: 60  RDE---EDFELTVSSAGLGYPFKVEQQYQKNLGKSVEIKLNDHT----KLNGILLRFTPE 112

Query: 142 GFFLE------KEKRGEKDMNELQIAISFDSLLSAR 171
              +E       E    K + + +  I  + +   +
Sbjct: 113 EIVIEQEEKKIIEGSKRKQLVKTERTIVRNDIKEIK 148


>gi|299142251|ref|ZP_07035384.1| conserved hypothetical protein [Prevotella oris C735]
 gi|298576340|gb|EFI48213.1| conserved hypothetical protein [Prevotella oris C735]
          Length = 155

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 58/153 (37%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   + +  +  V I +  +  ++++  ++  D  + + DC  LS+ I   L  + 
Sbjct: 7   VKRLVDEWLADKEYFLVGIDISPDDKIVVE--IDHAD-GVWIEDCVALSKYIEDRLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V         D +K  G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVVQQYVNFIGKEVEV----MDADGKKFQGVLKSVDGNDFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSAR 171
                 ++ E +      ++  A   D++   +
Sbjct: 117 VTVNEKVKVEGKKRPQKMDVDHAFKMDNVKYTK 149


>gi|288924203|ref|ZP_06418239.1| protein of unknown function DUF150 [Frankia sp. EUN1f]
 gi|288344450|gb|EFC78943.1| protein of unknown function DUF150 [Frankia sp. EUN1f]
          Length = 325

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 61/174 (35%), Gaps = 27/174 (15%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           E R   D  +   + S ++P +    F    +++    +  +   V   D  + L    +
Sbjct: 36  ESRAAAD-AIRAQLRSRLEPRLAAAGFDLEDVTVARAGSRSVVRVVVDRDEGIDLDAVAD 94

Query: 72  LSQAISPILDVEN----------------------IIEGHYRLEVSSPGIDRPMVRKSDF 109
            S+ +S  LD +                        + G Y LEV+SPG+DRP+V    +
Sbjct: 95  ASRIVSATLDEDEQGSAAERGDAAGARPLSGSGAGPLGGPYVLEVTSPGVDRPLVEPRHW 154

Query: 110 LRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS 163
            R  G +V       S     + G+++   + G  L       +     +  + 
Sbjct: 155 RRAVGRLVLVRRADGSE----VEGRVLSAGDDGADLAIPTGVARRGRPARTRLE 204


>gi|225021162|ref|ZP_03710354.1| hypothetical protein CORMATOL_01174 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305680947|ref|ZP_07403754.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
           14266]
 gi|224946069|gb|EEG27278.1| hypothetical protein CORMATOL_01174 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305659152|gb|EFM48652.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
           14266]
          Length = 188

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             +  ++QPV ++       I +       +       D        E ++Q IS + D 
Sbjct: 10  EILFPLVQPVADQYGMDIEYIKISRAGKKSVVAIAVDADNRPDSDVLEAITQEISELFDE 69

Query: 83  ENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           +           Y LEVS+PG+  P+ +   + R  G +V          K++ +     
Sbjct: 70  QETAGVLNFGPGYTLEVSTPGVSTPLTKPRHWRRNRGRLVTL----VDDGKKRQVRIGAL 125

Query: 138 TSETGFFLEKEKRGEK 153
             +    +  E+ G+K
Sbjct: 126 NDDETSVITIERVGKK 141


>gi|38234061|ref|NP_939828.1| hypothetical protein DIP1480 [Corynebacterium diphtheriae NCTC
           13129]
 gi|51316647|sp|Q6NGM9|RIMP_CORDI RecName: Full=Ribosome maturation factor rimP
 gi|38200323|emb|CAE50008.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
          Length = 184

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 18/178 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             ++ ++ PV+ + +     I + +     L       D    L   E +S  IS + D 
Sbjct: 7   EVLTELVTPVVAQHNMDLEGIRINKAGKKSLVAVSVDSDFRPDLDQLELVSNQISEVFDA 66

Query: 83  -----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
                E      Y LEV +PG+D+P+     + R    +VA E       K+ +      
Sbjct: 67  GEAAGELSFGAGYTLEVGTPGLDQPLASARRWRRNRHRLVALE----VEGKKSVERIGAL 122

Query: 138 TSETGFFLEKEKRGEK---------DMNELQIAISFDSLLSARLIVTDELLRASLNNY 186
             +    +  ++RG+K         +  +  + I F       L +T      +L+  
Sbjct: 123 NDDETAVIVVKRRGKKLVVRSVQLAENTQAVVEIEFAKPAEDELALTALEFDQALDRG 180


>gi|328948923|ref|YP_004366260.1| hypothetical protein Tresu_2093 [Treponema succinifaciens DSM 2489]
 gi|328449247|gb|AEB14963.1| protein of unknown function DUF150 [Treponema succinifaciens DSM
           2489]
          Length = 155

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 64/144 (44%), Gaps = 14/144 (9%)

Query: 32  VIEEMSFRSVQISLLEEKNLL-LQIFVERDD--GNMTLRDCEELSQAI-SPILDVENIIE 87
           V+    F+ V++ ++ +   + +   +   D   ++ + DC +  +A+ S ++ +    E
Sbjct: 18  VMSAEGFKLVELHVVPQNGKINISAVIASSDSKKDIGVSDCAKAHRALFSEMVKILGKNE 77

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
               +E+ SPGI+R +   ++F  + G  V       +     + GKI  + +    LE 
Sbjct: 78  DDISMEMCSPGIERTLRNAAEFEIFTGREVRVWDKNVND---WVCGKIKSSDKNQVTLEL 134

Query: 148 EKRGEKDMNELQIAISFDSLLSAR 171
           E  GE+       ++++  +  A+
Sbjct: 135 EGGGEE-------SVAYADIAKAK 151


>gi|259645270|sp|A1WLI5|RIMP_VEREI RecName: Full=Ribosome maturation factor rimP
          Length = 245

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 22/152 (14%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
              ++TL DCE++++ +   L+V+ +   + RLEV+SPGIDRP+  + D LR+ G V+  
Sbjct: 96  PAQSVTLEDCEKVTRQLQFALEVDGV--QYQRLEVASPGIDRPLRGEQDLLRFAGSVIDI 153

Query: 120 EIVLSSGD---------KQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQ 159
            +    G          ++K  G +  T+  G+ +               +         
Sbjct: 154 TLKAPIGGAAAGKVGATRKKFRGTLERTASGGWQIVWSDAPPPKPGQRVGKKRLPAPLQA 213

Query: 160 IAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
           +  S D +   RL    +    +     + AG
Sbjct: 214 LGFSLDEVRDMRLAPIVDFKGRTGKAGAAPAG 245



 Score = 43.1 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 25 ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
          +  +++P++  + +  V+I        LL++ ++  
Sbjct: 3  LQQIVEPIVTGLGYALVEIERSAGG--LLRVTIDLP 36


>gi|226355943|ref|YP_002785683.1| hypothetical protein Deide_10390 [Deinococcus deserti VCD115]
 gi|259585746|sp|C1CUR2|RIMP_DEIDV RecName: Full=Ribosome maturation factor rimP
 gi|226317933|gb|ACO45929.1| conserved hypothetical protein [Deinococcus deserti VCD115]
          Length = 154

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 7/129 (5%)

Query: 25  ISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDV 82
           +  +    +E + F  +++ +  +    ++ + V+R D+  +T+ D  + S+A     D 
Sbjct: 11  LQQIAHAAVEPLGFEVLEVQVQSQGGEKIVLVRVDRLDEQPVTMEDLTKASRAAEAEFDR 70

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
            + + G YRLE  SPG  RP+ R   F R  G           G+       I   S   
Sbjct: 71  LDPVAGEYRLEFESPGSKRPLTRARHFERMLGLKARVR-----GEGHAFTAPIKAVSGDQ 125

Query: 143 FFLEKEKRG 151
              +   + 
Sbjct: 126 VTFDVSGQD 134


>gi|330997780|ref|ZP_08321615.1| hypothetical protein HMPREF9442_02717 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329569668|gb|EGG51433.1| hypothetical protein HMPREF9442_02717 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 155

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 59/153 (38%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V +++  +  ++++  ++  +  + + DC ELS+ I   L  E 
Sbjct: 7   VRGLVEEWLEGRDYFLVDVAVSADDRIVVE--IDHAE-GVWIEDCVELSRFIESRLSREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V   +       +KL G +       F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYVNHVGSEVDVLMADG----RKLHGVLTAAGPESFE 116

Query: 145 LEK------EKRGEKDMNELQIAISFDSLLSAR 171
           +        E        E  + + +D +   +
Sbjct: 117 VTVKVKRKLEGEKRPKWVEETVTLRYDEIKYTK 149


>gi|323343774|ref|ZP_08084001.1| hypothetical protein HMPREF0663_10536 [Prevotella oralis ATCC
           33269]
 gi|323095593|gb|EFZ38167.1| hypothetical protein HMPREF0663_10536 [Prevotella oralis ATCC
           33269]
          Length = 155

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 56/146 (38%), Gaps = 13/146 (8%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   ++   +  V + +  +  ++++  ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKKLVDEWLQNKDYFLVGVEISPDDKIVVE--IDHAD-GVWIEDCVELSKYIESYLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V            K+ G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVPQQYINFIGKEVEVLDADGV----KVKGLLKSVDGNEFV 116

Query: 145 LEKEKRGEKDMNELQIAISFDSLLSA 170
           +   ++ + +  +  +      +  A
Sbjct: 117 VTVREKVKVEGKKRPV---LQDVDHA 139


>gi|121609703|ref|YP_997510.1| hypothetical protein Veis_2751 [Verminephrobacter eiseniae EF01-2]
 gi|121554343|gb|ABM58492.1| protein of unknown function DUF150 [Verminephrobacter eiseniae
           EF01-2]
          Length = 295

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 22/152 (14%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
              ++TL DCE++++ +   L+V+ +   + RLEV+SPGIDRP+  + D LR+ G V+  
Sbjct: 146 PAQSVTLEDCEKVTRQLQFALEVDGV--QYQRLEVASPGIDRPLRGEQDLLRFAGSVIDI 203

Query: 120 EIVLSSGD---------KQKLIGKIMGTSETGFFLEKEK-----------RGEKDMNELQ 159
            +    G          ++K  G +  T+  G+ +               +         
Sbjct: 204 TLKAPIGGAAAGKVGATRKKFRGTLERTASGGWQIVWSDAPPPKPGQRVGKKRLPAPLQA 263

Query: 160 IAISFDSLLSARLIVTDELLRASLNNYGSYAG 191
           +  S D +   RL    +    +     + AG
Sbjct: 264 LGFSLDEVRDMRLAPIVDFKGRTGKAGAAPAG 295



 Score = 43.1 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 25 ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
          +  +++P++  + +  V+I        LL++ ++  
Sbjct: 53 LQQIVEPIVTGLGYALVEIERSAGG--LLRVTIDLP 86


>gi|218131823|ref|ZP_03460627.1| hypothetical protein BACEGG_03444 [Bacteroides eggerthii DSM 20697]
 gi|317474561|ref|ZP_07933835.1| hypothetical protein HMPREF1016_00814 [Bacteroides eggerthii
           1_2_48FAA]
 gi|217986126|gb|EEC52465.1| hypothetical protein BACEGG_03444 [Bacteroides eggerthii DSM 20697]
 gi|316909242|gb|EFV30922.1| hypothetical protein HMPREF1016_00814 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 155

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 64/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E+  +  V++ +  +  ++++I        + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLEDKDYFLVEVIISPDDKIVVEI---DHKEGVWIEDCVELSRYIESRLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V           +K  G + G  E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYVNHIGKEVEVLAKDG----RKHCGILKGADEQQFT 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  +K+ +++        +  +  +++ +   +
Sbjct: 117 VTVQKKVKEEGAKRPKMVDEDLTFTYEEIKYTK 149


>gi|149370940|ref|ZP_01890535.1| hypothetical protein SCB49_04625 [unidentified eubacterium SCB49]
 gi|149355726|gb|EDM44284.1| hypothetical protein SCB49_04625 [unidentified eubacterium SCB49]
          Length = 153

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 69/160 (43%), Gaps = 18/160 (11%)

Query: 21  LAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +  ++  ++   ++E  S   + + +  +    +++ ++ DD  + + DC  +S+A+   
Sbjct: 1   MREEVEKLLDKALKENPSLFLIDLEVTADNQ--IRVTIDGDD-GVKVEDCIAVSRAVEHN 57

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E      + ++V S G   P+  +  +++  G  V  +        +K+   ++   
Sbjct: 58  LDEEL----DFSIDVMSCGASEPLTMQRQYVKNVGRNVLVKT----DKGEKIEATLVAAD 109

Query: 140 ETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARLI 173
           E    L  + R  K + + ++       I ++ ++  +++
Sbjct: 110 EENITLNWKAREPKPVGKGKVTVKKEAVIPYNEIVQTKVM 149


>gi|300743964|ref|ZP_07072984.1| conserved hypothetical protein [Rothia dentocariosa M567]
 gi|300380325|gb|EFJ76888.1| conserved hypothetical protein [Rothia dentocariosa M567]
          Length = 221

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDG---NMTLRDCEELSQAIS 77
             +++  I+PV+ E S    +I +     N  ++I V+  +    +++L    E+S AIS
Sbjct: 54  EDEVNEAIKPVLSEFSLVLERIKISGPAANRTVEITVDYTEDRTDSLSLDSLAEISGAIS 113

Query: 78  PILDVENIIEGH--YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +  +    Y LEVSSPG  R +  +  + R    +VA      +      + ++
Sbjct: 114 QALDKADKHDEFFPYMLEVSSPGATRELTERRHWKRARTRLVAVTQTDGTE----YVARL 169

Query: 136 MGTSETGFFLEKEKRGEKDMN---ELQIAISFDSLLSARL 172
              ++ G  L ++K+ +K         + + ++++  A +
Sbjct: 170 DEITDEGPVLRRKKQTKKGQKQTYHDAVIVPWENIGHANV 209


>gi|227833357|ref|YP_002835064.1| hypothetical protein cauri_1533 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262184343|ref|ZP_06043764.1| hypothetical protein CaurA7_10158 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254800550|sp|C3PH22|RIMP_CORA7 RecName: Full=Ribosome maturation factor rimP
 gi|227454373|gb|ACP33126.1| hypothetical protein cauri_1533 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 188

 Score = 65.0 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 7/145 (4%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++ ++QPV          +      K   + I ++ D+   +    EELSQ IS I D
Sbjct: 7   AQLTEILQPVAAARGLDIEDVKTTRAGKKSQVIIRIDGDERPSSDL-IEELSQEISEIFD 65

Query: 82  VENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
            +           Y LEVS+PG+D P+     + R  G +V   +    G  +      +
Sbjct: 66  AQEEAGTLNFGAGYTLEVSTPGVDFPLSASRHWRRNQGRLVGYALAEEPGTTRVARIGAL 125

Query: 137 GTSETGFFLEKEKRGEKDMNELQIA 161
              E    L    + E      ++ 
Sbjct: 126 SEDEESVALITMVKKEVRYQIERLE 150


>gi|227504823|ref|ZP_03934872.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
 gi|227198673|gb|EEI78721.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
          Length = 188

 Score = 65.0 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 13/155 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++QP++E        +   +  K   + I ++ D    +    EE+S  IS   
Sbjct: 6   AAQLTELLQPLLEPRGLDVEDVKTTKAGKKSQVIIRIDGDQRP-SSDVLEEVSNQISEFF 64

Query: 81  DV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D      E      Y LEVS+PG+D P+     + R  G +VA E+     +  ++    
Sbjct: 65  DAKEESGELNFGAGYTLEVSTPGVDLPLTAPRHWRRNRGRLVAFELTPGKSEVARIGALS 124

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              S        +K     +         +++  A
Sbjct: 125 DDASSVALITTVKKDVYFRIER------LENIARA 153


>gi|86140763|ref|ZP_01059322.1| hypothetical protein MED217_16465 [Leeuwenhoekiella blandensis
           MED217]
 gi|85832705|gb|EAQ51154.1| hypothetical protein MED217_16465 [Leeuwenhoekiella blandensis
           MED217]
          Length = 154

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 73/159 (45%), Gaps = 17/159 (10%)

Query: 21  LAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +++++    +E  S   + + +       + + ++ D+  ++++DC  +S+ +   
Sbjct: 2   LKEKVAALLDEAFKEYPSLYLIDLKIKGNNE--IVVIIDGDE-GVSVQDCINVSRKVEHN 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E      + LEV S G   P+V K  + +  G  +   +   +    K+ G ++   
Sbjct: 59  LDREE---EDFSLEVMSAGATEPLVNKRQYKKNEGRDLEVILQDGA----KIKGNLIQVH 111

Query: 140 ETGFFLEKEKRGEKDMNELQIA------ISFDSLLSARL 172
           + G  L  ++R  K++ + ++       I++D++  A++
Sbjct: 112 DEGIVLFWKERVPKEVGKGKMTVEKEEVIAYDAIKQAKV 150


>gi|298372249|ref|ZP_06982239.1| conserved hypothetical protein [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275153|gb|EFI16704.1| conserved hypothetical protein [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 152

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 65/159 (40%), Gaps = 16/159 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              I   I+  +       V +S+  +  ++++I     + ++ L  C EL++ I    D
Sbjct: 4   KDLIRQTIEEKLASTDCFLVSLSISGDNQIMVEI---DSETSVDLDFCVELTRYIEQHFD 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            +      Y LE+ S  I +P V +  + +  G  V         + +K+ G ++     
Sbjct: 61  RD---AEDYSLEIGSYSITKPFVDRRQYRKNIGRKVEVLT----EESRKIRGTLVAVDND 113

Query: 142 GFFLEKEKR------GEKDMNELQIAISFDSLLSARLIV 174
           GF LE E++        K + + +I + + S+   +L  
Sbjct: 114 GFTLEIEEKELVEGQKRKKLVKKEITLLYSSVKQTKLEF 152


>gi|282879393|ref|ZP_06288136.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|281298506|gb|EFA90932.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 155

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +++  +  V + +   K+  + + ++  D  + + DC ELS+ I   LD + 
Sbjct: 7   VKGLVEDWLQDKDYFLVDVEVS--KDDKIVVEIDHAD-GVWIEDCVELSRYIEDRLDRD- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             +  Y LEV S G+ +P      ++ + G  V            K  G +       F 
Sbjct: 63  --DEDYELEVGSAGLGQPFKVPQQYINFIGKEVEVLDGDGL----KYRGVLKSVDGNDFV 116

Query: 145 LEKEKRGEKDMNELQ 159
           +  +++ + +  +  
Sbjct: 117 VTVDEKVKVEGKKRP 131


>gi|298387891|ref|ZP_06997440.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
 gi|298259298|gb|EFI02173.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
          Length = 155

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRFIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVVTRDG----RKLAGILKDADEEKFT 116

Query: 145 LEKEKRGEKDMNELQIAISFDS 166
           +  EK+ + + ++    I  D 
Sbjct: 117 VGVEKKVKLEGSKRPKLIEEDE 138


>gi|288925327|ref|ZP_06419261.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|315606723|ref|ZP_07881733.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|288337798|gb|EFC76150.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|315251578|gb|EFU31557.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 155

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 59/136 (43%), Gaps = 10/136 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + ++++  +++  +  V I +   ++  + + ++  D  + + DC ELS+ I   L  + 
Sbjct: 7   VKTLVEEWLQDKEYFLVDIQI--GQDDKIVVEIDHAD-GVWIEDCVELSKYIEDRLSRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S G+ +P      ++ + G  V        GD +K+ G +       F 
Sbjct: 64  ---EDYELEVGSAGLGQPFKVAQQYINFIGKEVEV----LDGDGKKVKGLLKSVDGNDFV 116

Query: 145 LEKEKRGEKDMNELQI 160
           +   ++ + +  +  +
Sbjct: 117 VSVNEKVKVEGKKRPV 132


>gi|642363|emb|CAA88035.1| 15 kD protein [Thermus thermophilus]
          Length = 156

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           +  D+  +++  +  +    +++     +  LL     +D+  +T+ D EE S+ I   L
Sbjct: 15  VTVDLWQLVEEAVSPLGLDVLEVHF--ARGELLVRLERKDERPITVADLEEASRHIEAAL 72

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E+ I G YRL V SPG  R +  +  F R+ G              +   G+I+    
Sbjct: 73  DREDPIPGSYRLLVESPGPKR-LFTRRHFERFQGLKAKV------PGPEGFTGRILRVEG 125

Query: 141 TGFFLEKEKRGEK 153
                +      +
Sbjct: 126 EEVVFQVGDEERR 138


>gi|145224622|ref|YP_001135300.1| hypothetical protein Mflv_4042 [Mycobacterium gilvum PYR-GCK]
 gi|315444954|ref|YP_004077833.1| hypothetical protein Mspyr1_33870 [Mycobacterium sp. Spyr1]
 gi|259585792|sp|A4TCF3|RIMP_MYCGI RecName: Full=Ribosome maturation factor rimP
 gi|145217108|gb|ABP46512.1| protein of unknown function DUF150 [Mycobacterium gilvum PYR-GCK]
 gi|315263257|gb|ADT99998.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
          Length = 178

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 9/149 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +  ++        +    + +         + +   D  + L    ELS+  S  LD
Sbjct: 15  QRQVVELLDGEFARAGYDIEDVVIDAATRPPRIVVIADGDRGLDLDAVAELSRLASEQLD 74

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
             +     Y LEV+SPG+DRP+  +  + R  G +    +   S     L G+I      
Sbjct: 75  TLDTPP--YVLEVTSPGVDRPLTEEKHYRRAQGRLAEVTLADGS----TLTGRIGAVQNA 128

Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              L      E   N     I+ D+++ A
Sbjct: 129 TVALVV---REARSNLTVRDIALDAVVKA 154


>gi|194476585|ref|YP_002048764.1| hypothetical protein PCC_0102 [Paulinella chromatophora]
 gi|171191592|gb|ACB42554.1| hypothetical protein PCC_0102 [Paulinella chromatophora]
          Length = 159

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 9/126 (7%)

Query: 50  NLLLQIFV-ERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSD 108
            + L+I +    + ++++ DC   S+ +   LD  ++++  Y LEVSSPGI+  ++   D
Sbjct: 37  PITLKIQISVSSERDVSINDCTVFSRQVEEALDNSSLLKEAYILEVSSPGINEELINDRD 96

Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLL 168
           F  + G  V   +  S     +  G ++   +    +    R           I  + ++
Sbjct: 97  FRIFRGFPVEVVVNKSKTPTNRREGLLLERDDDSILINIRGRIH--------RIPREDVI 148

Query: 169 SARLIV 174
           S  LI+
Sbjct: 149 SVHLIM 154


>gi|315185929|gb|EFU19693.1| protein of unknown function DUF150 [Spirochaeta thermophila DSM
           6578]
          Length = 160

 Score = 64.6 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 16/166 (9%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEE 71
           PR          +     P++E+M +  V++ L        L+I +      +++ DC  
Sbjct: 3   PRAIR-TPEEEKLYQHFVPLLEKMGYALVELHLRYRRGGAALEIVIHGAH--LSVDDCAR 59

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           + + + P   +  +      +EV SPGIDR +  + +   + G  +      S   ++  
Sbjct: 60  VLRLLKPKAQLL-LDLADLHMEVMSPGIDRVLKNRDELALFVGKGLKLLDTRS---QRWE 115

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDE 177
            G +   +E    L             + +I  DS+  A+L  T E
Sbjct: 116 GGILEAVTEDHVVLR--------KGAERRSIPIDSIGKAKLDFTQE 153


>gi|213021801|ref|ZP_03336248.1| hypothetical protein Salmonelentericaenterica_03335 [Salmonella
          enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 59

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 28 VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
          +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +LDVE+ I 
Sbjct: 1  MITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDPIS 59


>gi|29348811|ref|NP_812314.1| hypothetical protein BT_3402 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568844|ref|ZP_04846254.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|34223111|sp|Q8A2A3|RIMP_BACTN RecName: Full=Ribosome maturation factor rimP
 gi|29340717|gb|AAO78508.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840863|gb|EES68944.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 155

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 61/142 (42%), Gaps = 10/142 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRFIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVVTRDG----RKLAGILKDADEEKFT 116

Query: 145 LEKEKRGEKDMNELQIAISFDS 166
           +  +K+ + + ++    I  D 
Sbjct: 117 VGVQKKVKLEGSKRPKLIEEDE 138


>gi|254431118|ref|ZP_05044821.1| hypothetical protein CPCC7001_1009 [Cyanobium sp. PCC 7001]
 gi|197625571|gb|EDY38130.1| hypothetical protein CPCC7001_1009 [Cyanobium sp. PCC 7001]
          Length = 158

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 3/145 (2%)

Query: 21  LAGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDD-GNMTLRDCEELSQAISP 78
           L  ++ ++   V  E+ F   Q++LL  +  + LQ+ V+R D  +++L +C  LS  +  
Sbjct: 5   LIPELETLAGKVCAELGFELRQVNLLTHRIPMTLQVLVQRGDGRDISLDECAALSAPLGE 64

Query: 79  ILDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           + D    + E  Y LE+SSPG+   +  + DF  + G  VA      +G + +  G ++ 
Sbjct: 65  VFDAAGVLGEEAYVLEISSPGVSDELQDERDFRSFRGFPVAVRFTDRNGAEARCEGLLLE 124

Query: 138 TSETGFFLEKEKRGEKDMNELQIAI 162
            + +   +    R ++      I +
Sbjct: 125 RTASELQINMRGRTKRIPRASVIQV 149


>gi|319953581|ref|YP_004164848.1| ribosome maturation factor rimp [Cellulophaga algicola DSM 14237]
 gi|319422241|gb|ADV49350.1| Ribosome maturation factor rimP [Cellulophaga algicola DSM 14237]
          Length = 153

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 18/159 (11%)

Query: 22  AGDISSVIQPVI-EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +  +++  + E  S   +  ++     + + +  +     + L+DC  +++AI   L
Sbjct: 3   KEKVLELLEGALKENESIFLIDFTIGPANKISITLDGD---TGVNLKDCIAINRAIESNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E      + LEV+S G   PMV    + +  G  +  + +       K  G +   ++
Sbjct: 60  DREE---EDFSLEVASVGATTPMVMPRQYKKNIGRELEVKTLGG-----KFEGILTEAND 111

Query: 141 TGFFLEKEKRGEKDMNELQI------AISFDSLLSARLI 173
            G  LE + R  K + + ++         F  +  A++I
Sbjct: 112 QGITLEWKAREPKPIGKGKVTVQKKQEFIFSDIQEAKVI 150


>gi|311113214|ref|YP_003984436.1| hypothetical protein HMPREF0733_11545 [Rothia dentocariosa ATCC
           17931]
 gi|310944708|gb|ADP41002.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931]
          Length = 221

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 70/160 (43%), Gaps = 13/160 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVE---RDDGNMTLRDCEELSQAIS 77
             ++   I+PV+ E S    +I +     N  ++I V+       +++L    E+S AIS
Sbjct: 54  EDEVGEAIKPVLSEFSLVLERIKISGPAANRTVEITVDYMEDRTDSLSLDSLAEISGAIS 113

Query: 78  PILDVENIIEGH--YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
             LD  +  +    Y LEVSSPG  R +  +  + R    +VA      +      + ++
Sbjct: 114 QALDKADEHDEFFPYMLEVSSPGATRELTERRHWKRARTRLVAVTQTDGTE----YVARL 169

Query: 136 MGTSETGFFLEKEKRGEKDMN---ELQIAISFDSLLSARL 172
              ++ G  L ++K+ +K         + + ++++  A +
Sbjct: 170 DEITDEGPVLRRKKQTKKGQKQTYHDAVIVPWENIGHANV 209


>gi|167950227|ref|ZP_02537301.1| 15 kDa protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 79

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 42/70 (60%)

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
           +LDVE+ I+  Y LEVSSPG+DRP+   +DF R+ G  V  +  +  G++++  G + G 
Sbjct: 1   MLDVEDPIKEKYDLEVSSPGLDRPLFEAADFERFKGQRVRVKTRMKIGNQRRFSGTLCGL 60

Query: 139 SETGFFLEKE 148
                 LE++
Sbjct: 61  EGNTILLEED 70


>gi|33863792|ref|NP_895352.1| hypothetical protein PMT1525 [Prochlorococcus marinus str. MIT
           9313]
 gi|51316777|sp|Q7V5M7|RIMP_PROMM RecName: Full=Ribosome maturation factor rimP
 gi|33635375|emb|CAE21700.1| DUF150 [Prochlorococcus marinus str. MIT 9313]
          Length = 154

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 3/145 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPILD 81
           D+ ++         ++   +        + +Q+ + R D  +++L DC   S ++   L+
Sbjct: 8   DLETLASATAAGKGYKLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSASMDEALE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
              +    Y LE+SSPGI   +    DFL + G  V         D  +  G +   S+ 
Sbjct: 68  ASQLFTEAYVLEISSPGIGDQLHSDQDFLTFRGFPVEISFRDHDSDLHQA-GLLHKRSDE 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDS 166
              +  + R ++   +    +   +
Sbjct: 127 HVHINIKGRIQRIPRKAVTCVRLTN 151


>gi|189465080|ref|ZP_03013865.1| hypothetical protein BACINT_01424 [Bacteroides intestinalis DSM
           17393]
 gi|189437354|gb|EDV06339.1| hypothetical protein BACINT_01424 [Bacteroides intestinalis DSM
           17393]
          Length = 155

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 63/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++I        + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLEGKEYFLVEVTISPDDKIVVEI---DHKEGVWIEDCVELSRYIESKLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYINHIGKEVEVLRKDG----RKLCGVLKTADEQHFT 116

Query: 145 LEKEKRGEKDMNELQI------AISFDSLLSAR 171
           +  EK+ + +  +          +++D +   +
Sbjct: 117 VTVEKKVKPEGAKRPTLVEEDETLAYDEIKYTK 149


>gi|329964511|ref|ZP_08301565.1| hypothetical protein HMPREF9446_03170 [Bacteroides fluxus YIT
           12057]
 gi|328524911|gb|EGF51963.1| hypothetical protein HMPREF9446_03170 [Bacteroides fluxus YIT
           12057]
          Length = 155

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 63/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++I        + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVDEWLEGKDYFLVEVTISPDDKIVVEI---DHKEGVWIEDCVELSRYIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V           +KL G +    +  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYINHVGKEVEVLTRDG----RKLGGVLKEADDRHFV 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  +K+ +++        +  + + +D +   +
Sbjct: 117 VTVQKKVKEEGAKRPKMVDEDLTLKYDEIKYTK 149


>gi|330836561|ref|YP_004411202.1| Ribosome maturation factor rimP [Spirochaeta coccoides DSM 17374]
 gi|329748464|gb|AEC01820.1| Ribosome maturation factor rimP [Spirochaeta coccoides DSM 17374]
          Length = 166

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 65/159 (40%), Gaps = 5/159 (3%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           +  +  ++ +I   + P++  +    V +   + +    + + ++      ++ DC ++ 
Sbjct: 1   MLKNELVSNEIYKELNPLVRSLGLDIVSVSRNVRQGASSVFLVIKASGRPTSVDDCAKVH 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + ++  L      +    LEVS+PG+ R      +F  + G  V         ++Q + G
Sbjct: 61  RLVASRL-EMLWQDRELSLEVSTPGLQRNFSDVQEFSLFTGDRVRIFDSQ---EEQWISG 116

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            I   S+ G  L +      +    ++ I +D +  A+L
Sbjct: 117 IIDEVSDAGVILTQVVGETAEPLAERMNIPYDRIKKAKL 155


>gi|158313031|ref|YP_001505539.1| hypothetical protein Franean1_1179 [Frankia sp. EAN1pec]
 gi|259585776|sp|A8L6F1|RIMP_FRASN RecName: Full=Ribosome maturation factor rimP
 gi|158108436|gb|ABW10633.1| protein of unknown function DUF150 [Frankia sp. EAN1pec]
          Length = 308

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 63/172 (36%), Gaps = 29/172 (16%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           ++   ++P +    F    +S+       +   V   DG + L    + S+ +S +LD E
Sbjct: 35  ELRRRLEPSLTTAGFDLEDVSVTRAGARSVVRVVVDRDGGIDLDAVADASRLVSAVLDGE 94

Query: 84  N----------------------IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121
           +                       I G Y LEV+SPG+DRP+V    + R  G +V    
Sbjct: 95  DIGTDGAGGTGGSGGAAGGSGASPISGAYVLEVTSPGVDRPLVEPRHWRRAVGRLVVVRR 154

Query: 122 VLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS---FDSLLSA 170
                    + G+++   + G  L       +    ++  I    + ++  A
Sbjct: 155 ADGVE----VEGRVLSADDEGADLAVPTAPARRGRPVRRRIERVVYATVARA 202


>gi|256824990|ref|YP_003148950.1| hypothetical protein Ksed_11450 [Kytococcus sedentarius DSM 20547]
 gi|256688383|gb|ACV06185.1| uncharacterized conserved protein [Kytococcus sedentarius DSM
           20547]
          Length = 160

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 16/138 (11%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFV----------ERDDGNMTLRDCE 70
              +  +    +  +      + +    K  ++++ V          +     +TL    
Sbjct: 7   TERVWELSSAAVAPLGLEVPDVVITPAGKRSVVRVLVEPALPVDDAGDTVLEPITLDQVA 66

Query: 71  ELSQAISPILDVENII-EGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           E ++ +S  +D ++   E  Y LEVSSPG+DRP+     F R  G  V          + 
Sbjct: 67  EATELVSTGIDADDPFGEQPYTLEVSSPGVDRPLTSLEHFRRAVGRRVEFR---PLEGE- 122

Query: 130 KLIGKIMGTSETGFFLEK 147
               +I   +E    LE 
Sbjct: 123 PFTERITRVAEEQIVLED 140


>gi|299783111|gb|ADJ41109.1| Ribosome maturation factor rimP [Lactobacillus fermentum CECT 5716]
          Length = 81

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           +EVSSPG +RP+ ++ D+ R     V   +       +   G +   S     +E   + 
Sbjct: 1   MEVSSPGAERPLKKEVDYQRALDQYVNVSLYQQIDGHKVFEGYLRQLSPDELTIEYMDK- 59

Query: 152 EKDMNELQIAISFDSLLSARLI 173
                + Q+ I  D +  ARL 
Sbjct: 60  ---TRQKQVVIPRDKVAKARLA 78


>gi|193213434|ref|YP_001999387.1| hypothetical protein Cpar_1795 [Chlorobaculum parvum NCIB 8327]
 gi|259585748|sp|B3QQI4|RIMP_CHLP8 RecName: Full=Ribosome maturation factor rimP
 gi|193086911|gb|ACF12187.1| protein of unknown function DUF150 [Chlorobaculum parvum NCIB 8327]
          Length = 170

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 65/165 (39%), Gaps = 12/165 (7%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDDGNMTLRDCEELSQA 75
            D  +   I   I  V          +   +     ++++ +E  D  +++  C +LS+ 
Sbjct: 1   MDEMIRRAIDESIAEVAVATGSDIYLVEADVRGGGRIIELTIE-ADKGVSIDQCAKLSRT 59

Query: 76  ISPILDVEN----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           I   L+       +  G + L VSSPGI  P+     +LR  G  +    + S G+++++
Sbjct: 60  IRARLEACEENLMLAAGDFELMVSSPGIGEPIRVSRQYLRHLGRKMKVVYLDSEGERKEI 119

Query: 132 IGKIMGT----SETGFFLE--KEKRGEKDMNELQIAISFDSLLSA 170
            GK+        E    +E   + + +K      + +    ++ A
Sbjct: 120 EGKLTEASLEGEEPSITIEPVVKGKKKKTSGREPLTLRLADVVKA 164


>gi|45658542|ref|YP_002628.1| hypothetical protein LIC12707 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|34222882|sp|Q8F7K3|RIMP_LEPIN RecName: Full=Ribosome maturation factor rimP
 gi|51316950|sp|Q72NX1|RIMP_LEPIC RecName: Full=Ribosome maturation factor rimP
 gi|45601785|gb|AAS71265.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 162

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 71/159 (44%), Gaps = 9/159 (5%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVER---DDGNMTLRDCEELSQAISP 78
            +IS ++  V+  +  +   + + +   + L+++ ++      G+++L +CE++S+ +  
Sbjct: 6   EEISGILDGVL-SLPVKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKE 64

Query: 79  ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138
            L+  +    +  L+VSS G +R +    D  R+ G  +          +++  G     
Sbjct: 65  ELERISPDLDYT-LKVSSAGAERKLNLPGDLDRFRGIPIRLVFRS-EESEKEQEGIFRVV 122

Query: 139 --SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                   LEK ++G+K + + Q  ++   +L   L V 
Sbjct: 123 NRDGDQIVLEKFQKGKKSVVKKQTTLNLKDILKGNLYVN 161


>gi|319900403|ref|YP_004160131.1| hypothetical protein Bache_0520 [Bacteroides helcogenes P 36-108]
 gi|319415434|gb|ADV42545.1| protein of unknown function DUF150 [Bacteroides helcogenes P
           36-108]
          Length = 155

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 64/158 (40%), Gaps = 17/158 (10%)

Query: 21  LAGDIS-SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           +   I   ++   +E   +  V++ +  +  +L++I        + + DC ELS+ I   
Sbjct: 2   IEKKIVCQIVDEWLEGKDYFLVEVIISPDDKILVEI---DHKEGVWIEDCVELSRYIESR 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L  E+     Y LEV S GI +P      ++   G  V           +KL G +    
Sbjct: 59  LSRED---EDYELEVGSAGIGQPFKVLQQYINHIGSEVEVLTKDG----RKLCGVLKEAD 111

Query: 140 ETGFFLEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           E  F +  +K+ +++        +  ++ ++D +   +
Sbjct: 112 ERHFVVTIQKKVKEEGAKRPKMVDEDLSFAYDEIKYTK 149


>gi|255536445|ref|YP_003096816.1| hypothetical protein FIC_02321 [Flavobacteriaceae bacterium
           3519-10]
 gi|255342641|gb|ACU08754.1| conserved hypothetical protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 155

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 17/159 (10%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     I  ++   + E      V +      ++ +   +   D  +TL+DC + S+AI 
Sbjct: 1   MDFRTKIEELLHGFLAERPDLFLVDLKFSAGDDITV---ILDGDSGVTLQDCLDASRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E      + L+V S G+  P+V    F +  G  +   +  S+     + G++  
Sbjct: 58  FNVDREE---HDFALQVMSAGLSEPLVSPRQFRKNIGRELDILMKDSTQ----IEGELSK 110

Query: 138 TSETGFFLEKEKRGEKDMNELQI------AISFDSLLSA 170
             E    L  + R  K++ + ++       I +  +  A
Sbjct: 111 VDEDKITLVLQYRKPKEIGKGKMDVTEEKEILYTDIKKA 149


>gi|295086244|emb|CBK67767.1| Uncharacterized protein conserved in bacteria [Bacteroides
           xylanisolvens XB1A]
          Length = 155

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVDEWLEGKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRYIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVLTKDG----RKLAGILKDADEEKFT 116

Query: 145 LEKEKRGEKDMNELQIAISFDS 166
           +  +K+ + + ++    I  D 
Sbjct: 117 VAVQKKVKLEGSKRPKLIEEDE 138


>gi|160887869|ref|ZP_02068872.1| hypothetical protein BACUNI_00272 [Bacteroides uniformis ATCC 8492]
 gi|270294868|ref|ZP_06201069.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317477856|ref|ZP_07937042.1| hypothetical protein HMPREF1007_00158 [Bacteroides sp. 4_1_36]
 gi|156862555|gb|EDO55986.1| hypothetical protein BACUNI_00272 [Bacteroides uniformis ATCC 8492]
 gi|270274115|gb|EFA19976.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905992|gb|EFV27760.1| hypothetical protein HMPREF1007_00158 [Bacteroides sp. 4_1_36]
          Length = 155

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 63/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +    +  V++++  +  +L++I        + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLAGKDYFLVEVTISPDDKILVEI---DHKEGVWIEDCVELSRYIESKLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYINHIGKEVEVLAKDG----RKLSGVLKEADEQHFV 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  +K+ +++        +  +  +++ +   +
Sbjct: 117 VTIQKKVKEEGAKRPKLVDEDLTFTYEEIKYTK 149


>gi|261881034|ref|ZP_06007461.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270332216|gb|EFA43002.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 155

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 56/136 (41%), Gaps = 10/136 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           + ++++  +    +  V I +     + ++  ++  D  + + DC ELS+ I   LD E 
Sbjct: 7   VKNIVEEWLAGKEYFLVDIKVDSNDKITVE--IDHAD-GVYINDCVELSKFIESQLDRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
             +  Y LEV S GI +P   +  ++   G  V           +K+ G +       F 
Sbjct: 63  --QEDYELEVGSAGIGQPFKVEQQYVNHIGKPVEVLDADG----KKVRGVLKSVEGRDFV 116

Query: 145 LEKEKRGEKDMNELQI 160
           +   ++ + +  +  +
Sbjct: 117 VSVNEKVKVEGKKRPV 132


>gi|298480546|ref|ZP_06998743.1| conserved hypothetical protein [Bacteroides sp. D22]
 gi|298273367|gb|EFI14931.1| conserved hypothetical protein [Bacteroides sp. D22]
          Length = 155

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 60/153 (39%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVDEWLEGKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRYIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVLTKDG----RKLAGILKDADEEKFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSAR 171
                 ++ E      + E     +++ +   +
Sbjct: 117 VAVQKKVKLEGAKRPKLQEEDETFTYEQIKYTK 149


>gi|237716686|ref|ZP_04547167.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405462|ref|ZP_06082012.1| UPF0090 protein [Bacteroides sp. 2_1_22]
 gi|294646241|ref|ZP_06723895.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294809091|ref|ZP_06767809.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229442669|gb|EEO48460.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356337|gb|EEZ05427.1| UPF0090 protein [Bacteroides sp. 2_1_22]
 gi|292638459|gb|EFF56823.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294443645|gb|EFG12394.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 155

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 60/153 (39%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E   +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVDEWLEGKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRYIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVLTKDG----RKLAGILKDADEEKFT 116

Query: 145 ------LEKEKRGEKDMNELQIAISFDSLLSAR 171
                 ++ E      + E     +++ +   +
Sbjct: 117 VAVQKKVKLEGSKRPKLQEEDETFTYEQIKYTK 149


>gi|160883930|ref|ZP_02064933.1| hypothetical protein BACOVA_01904 [Bacteroides ovatus ATCC 8483]
 gi|237720418|ref|ZP_04550899.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260172454|ref|ZP_05758866.1| hypothetical protein BacD2_11366 [Bacteroides sp. D2]
 gi|293370439|ref|ZP_06616992.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|299147095|ref|ZP_07040162.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
 gi|315920748|ref|ZP_07916988.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156110660|gb|EDO12405.1| hypothetical protein BACOVA_01904 [Bacteroides ovatus ATCC 8483]
 gi|229450169|gb|EEO55960.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292634431|gb|EFF52967.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|298514980|gb|EFI38862.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
 gi|313694623|gb|EFS31458.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 155

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 64/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E 
Sbjct: 7   VCQIVEEWLEGKDYFLVEVTVSPDDKIVVE--IDHAE-GVWIEDCVELSRFIESKLNREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYYIHIGQEVEVLTGDG----RKLAGILKDADEEKFT 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  +K+ + + +      E     +++ +   +
Sbjct: 117 VGVQKKVKTEGSKRPKLVEEDETFTYEQIKYTK 149


>gi|300727484|ref|ZP_07060875.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299775187|gb|EFI71788.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 155

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 62/155 (40%), Gaps = 16/155 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E+  +  V I +  +  ++++  ++  D  + + DC ELS+ +   LD + 
Sbjct: 7   VKKLVDEWLEDKEYFLVDIQISPDDKIVVE--IDHAD-GVWIEDCAELSRFVQEHLDRD- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF- 143
             +  Y LEV S G+ +P      ++   G  V           +K+ G +       F 
Sbjct: 63  --QEDYELEVGSAGVGQPFKVAQQYVNNIGKEVEV----LDNTGKKIKGILKSVDGNNFV 116

Query: 144 -----FLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 ++ E +    + ++  A   D +   + +
Sbjct: 117 VSVSEKVKVEGKKRPVLQDVDYAFLMDQVKYTKYV 151


>gi|213865085|ref|ZP_03387204.1| hypothetical protein SentesT_35167 [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
          Length = 57

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 28 VIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENI 85
          +I   +E + +  V I  +  +   L+I+++ +D  + + DC ++S  +S +LDVE+ 
Sbjct: 1  MITAPVEALGYELVGIEFIRGRTSTLRIYIDSED-GINVDDCADVSHQVSAVLDVEDP 57


>gi|91217186|ref|ZP_01254148.1| hypothetical protein P700755_04298 [Psychroflexus torquis ATCC
           700755]
 gi|91184786|gb|EAS71167.1| hypothetical protein P700755_04298 [Psychroflexus torquis ATCC
           700755]
          Length = 157

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 71/161 (44%), Gaps = 18/161 (11%)

Query: 22  AGDISSVIQPVIE-EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              I ++++  +E + +   + + + ++ N+ + I  +RD   +++ DC  +S+AI   L
Sbjct: 5   KEQILTLVKQGLEEDEALFLIDLQISDKNNINVIIDGDRD---LSITDCVNMSRAIEHNL 61

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E      + LEV+S G   P+     F +  G  +A E        + +   +   S+
Sbjct: 62  DRE---IEDFSLEVASCGATEPLKFPRQFKKNIGRKLAVESQN-----ESIEATLTAASD 113

Query: 141 TGFFLEKEKRGEKDMN------ELQIAISFDSLLSARLIVT 175
               L+   +  K +       E +  I+++ +  A++I+ 
Sbjct: 114 EDIELKWTAKEPKPIGKGKHKVEKEAKIAYEDIDKAQVIIN 154


>gi|315023859|gb|EFT36861.1| hypothetical protein RAYM_00555 [Riemerella anatipestifer RA-YM]
 gi|325335774|gb|ADZ12048.1| Uncharacterized protein family UPF0090 [Riemerella anatipestifer
           RA-GD]
          Length = 177

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 63/159 (39%), Gaps = 17/159 (10%)

Query: 19  MGLAGDISSVIQPVI-EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + +++   + E      + + +    +    + +   D  +TL+DC + S+AI 
Sbjct: 23  MSIKAQVETLLNDFLSEREDLFLIDLKVSAGDD---VVVILDGDNGVTLQDCLDASRAIE 79

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E      + L+V S G+  P+ +   F +  G  +   +  SS    K+ G++  
Sbjct: 80  FNMDREE---HDFSLQVMSAGLSEPLTQIRQFRKNIGRDLDILLNDSS----KIEGELAR 132

Query: 138 TSETGFFLEKEKRGEKDMNELQI------AISFDSLLSA 170
             E    L    R  K++ + ++       I    +  A
Sbjct: 133 VEEDKVVLILRYRKPKEIGKGKVDVEEEKEILLSDIKKA 171


>gi|296139426|ref|YP_003646669.1| hypothetical protein Tpau_1712 [Tsukamurella paurometabola DSM
           20162]
 gi|296027560|gb|ADG78330.1| protein of unknown function DUF150 [Tsukamurella paurometabola DSM
           20162]
          Length = 190

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 6/140 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +S+VI P + +      QI +       +   V   D   TL    +L++ +S  +D
Sbjct: 5   EAAVSTVIAPHLADAGLDLEQIRITNAGPKSVIAVVVDSDAGPTLDVLADLARTLSDAVD 64

Query: 82  VEN--IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
             +       + LEV++PG +RP+     + R  G   A E+         L+ +I   S
Sbjct: 65  GADDVFGGQAFTLEVTTPGAERPLREARHWRRARGRQAAIELA----GGDTLLARIGPLS 120

Query: 140 ETGFFLEKEKRGEKDMNELQ 159
           +    +     G K      
Sbjct: 121 DDETSVTVVLPGVKGAAPST 140


>gi|224536665|ref|ZP_03677204.1| hypothetical protein BACCELL_01541 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521756|gb|EEF90861.1| hypothetical protein BACCELL_01541 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 155

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 64/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   ++   +  V++++  +  ++++  ++  +  + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLDGKEYFLVEVAISPDDKIVVE--IDHKE-GVWIEDCVELSRYIESKLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           +KL G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYTNHIGKEVEVLRKDG----RKLCGVLKAADEQHFT 116

Query: 145 LEKEKRGEKDMNELQIA------ISFDSLLSAR 171
           +  EK+ + +  +          +++D +   +
Sbjct: 117 VTVEKKVKPEGAKRPQLVQEDEMLAYDEIKYTK 149


>gi|124022126|ref|YP_001016433.1| hypothetical protein P9303_04161 [Prochlorococcus marinus str. MIT
           9303]
 gi|167012912|sp|A2C6Q8|RIMP_PROM3 RecName: Full=Ribosome maturation factor rimP
 gi|123962412|gb|ABM77168.1| DUF150 [Prochlorococcus marinus str. MIT 9303]
          Length = 154

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 3/145 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDD-GNMTLRDCEELSQAISPILD 81
           D+ ++         ++   +        + +Q+ + R D  +++L DC   S ++   L+
Sbjct: 8   DLETLASATATGKGYKLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSASMDEALE 67

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
              +    Y LE+SSPGI   +    DFL + G  V         D  +  G +   S+ 
Sbjct: 68  ASQLFTEAYVLEISSPGIGDQLHSDQDFLTFRGFPVEISFRDDDSDLHQA-GLLHKRSDE 126

Query: 142 GFFLEKEKRGEKDMNELQIAISFDS 166
              +  + R ++   +    +   +
Sbjct: 127 HVHINIKGRIQRIPRKAVTCVRLTN 151


>gi|288800575|ref|ZP_06406033.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288332788|gb|EFC71268.1| conserved hypothetical protein [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 155

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 57/136 (41%), Gaps = 10/136 (7%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +++  +  V I +  +    + + ++  +  + + DC  LS+ I   +  + 
Sbjct: 7   VKQLVEQWLQDKDYFLVGIEVSNDDR--VVVEIDHSE-GVWIEDCVALSKFIEDHMSKDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
           +    Y LEV S G+ +P      ++ + G  V           +K+ G +     T F 
Sbjct: 64  V---DYELEVGSAGLGQPFKVPQQYINFIGKEVEVLDADG----RKVKGLLKSVEGTAFV 116

Query: 145 LEKEKRGEKDMNELQI 160
           +  +++ + +  +  +
Sbjct: 117 VTVKEKVKVEGKKRPV 132


>gi|332520008|ref|ZP_08396472.1| protein of unknown function DUF150 [Lacinutrix algicola 5H-3-7-4]
 gi|332044567|gb|EGI80761.1| protein of unknown function DUF150 [Lacinutrix algicola 5H-3-7-4]
          Length = 153

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 65/155 (41%), Gaps = 18/155 (11%)

Query: 25  ISSVIQPVIEE-MSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
           + ++I   +EE      + +++  +  + + I  +     +T+ DC  +S+A+   LD E
Sbjct: 6   VKNLINEALEERADLFLIDLTIGGDNAINVIIDGDN---GVTVEDCILISRAVEHNLDRE 62

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
                 + +EV+S G    +     F +  G  +  +        +     ++   E G 
Sbjct: 63  E---QDFSIEVASAGAAASLTLPRQFKKNIGRTLEVKTQT-----ETFEANLVSADENGI 114

Query: 144 FLEKEKRGEKDMNELQIA------ISFDSLLSARL 172
            LE + R  K + + ++       I+++ ++ A++
Sbjct: 115 SLEWKAREPKPVGKGKVTVQKQTNIAYNDIVEAKV 149


>gi|255325208|ref|ZP_05366314.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
 gi|311739682|ref|ZP_07713517.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|255297773|gb|EET77084.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
 gi|311305498|gb|EFQ81566.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 179

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 13/155 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++QP + E       I   +  K   + I ++ D    +    EE+S  IS   
Sbjct: 6   AQQLTDLLQPKLAERGLDVEDIKTTKAGKKSQVIIRIDGDKRP-SSDVLEEVSNEISAFF 64

Query: 81  DV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D      E      Y LEVS+PG+D P+     + R  G  V+ ++        + IG +
Sbjct: 65  DDKEAQGELNFGAGYTLEVSTPGVDLPLTAPRHWRRNRGRKVSFDLGDGKTQSAR-IGAL 123

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              ++    +   K+  +   E       +++  A
Sbjct: 124 NDAADAVILITASKKDVQARAER-----LENIARA 153


>gi|145295892|ref|YP_001138713.1| hypothetical protein cgR_1817 [Corynebacterium glutamicum R]
 gi|166980238|sp|A4QEZ5|RIMP_CORGB RecName: Full=Ribosome maturation factor rimP
 gi|140845812|dbj|BAF54811.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 178

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +S++I+P+     F    + + +             D    L   E  SQ I  + D
Sbjct: 6   TEILSALIEPLAASHKFDLEGLKVTKAGPKSAVAIKVDSDSRPDLDQLEVFSQEIGELFD 65

Query: 82  V-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                 E      Y LEVS+PG+D P+     + R  G +VA +       ++++     
Sbjct: 66  AAEQRGELNFGAGYTLEVSTPGVDNPLTLPRHWRRNRGRLVALD----QDGRKRVARIGA 121

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFD-----SLLSAR 171
                   +  E R +K +    + ++        +  A+
Sbjct: 122 LNDAETHVVLIE-RNKKLLEVTTLELAHSPRAVVEIEFAK 160


>gi|325954922|ref|YP_004238582.1| ribosome maturation factor rimP [Weeksella virosa DSM 16922]
 gi|323437540|gb|ADX68004.1| Ribosome maturation factor rimP [Weeksella virosa DSM 16922]
          Length = 155

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 66/160 (41%), Gaps = 17/160 (10%)

Query: 23  GDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             +  +I   IEE  +   V   +  +  +   I  +  D  + + +   +S+ +   L+
Sbjct: 4   AKVKRLIDEAIEENPTLFLVDWKVTPDNKIF--ILADG-DQGLPIEEIVRISRHVEHNLN 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            E      + LEVSSPG+  P+     + +  G  ++  ++      + L G+I+  +E 
Sbjct: 61  REE---CDFALEVSSPGLSTPLSMPRQYKKNIGRQISITLIDG----KVLEGEIVEANEE 113

Query: 142 GFFLEKEKRGEKDMNELQI------AISFDSLLSARLIVT 175
              L  E R  K + + +I         +D++  A ++V 
Sbjct: 114 AVELFWETREPKPVGKGKITVEHQEEFHYDTIQKAVIVVN 153


>gi|227503406|ref|ZP_03933455.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
 gi|227075909|gb|EEI13872.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
          Length = 179

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 13/155 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++QP +         I   +  K   + I ++ D    +    EE+S  IS   
Sbjct: 6   AQQLTDLLQPRLAARGLDVEDIKTTKAGKKSQVIIRIDGDKRP-SSDVLEEVSDDISAFF 64

Query: 81  DV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D      E      Y LEVS+PG+D P+     + R  G  V              IG +
Sbjct: 65  DEKEETGELNFGAGYTLEVSTPGVDLPLTSPRHWRRNQGRKVTFN-RGDDKSHTARIGAL 123

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               +    +  EK       E       +++  A
Sbjct: 124 NAAEDAVVLITSEKNEVHTEVER-----LENIAHA 153


>gi|167764122|ref|ZP_02436249.1| hypothetical protein BACSTE_02505 [Bacteroides stercoris ATCC
           43183]
 gi|167698238|gb|EDS14817.1| hypothetical protein BACSTE_02505 [Bacteroides stercoris ATCC
           43183]
          Length = 155

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 63/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +E+  +  V++ +  +  ++++I        + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLEDKEYFLVEVIISPDDKIVVEI---DHKEGVWIEDCVELSRYIESRLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V           +K  G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYVNHIGKEVEVLAKDG----RKHCGVLKDADERQFT 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  +K+ +++        +  +  +++ +   +
Sbjct: 117 VTVQKKVKEEGAKRPKMVDEDLTFTYEEIKYTK 149


>gi|298374482|ref|ZP_06984440.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
 gi|298268850|gb|EFI10505.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
          Length = 157

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S +I+  +   S   V + +      L+ + ++ D+  +++ DC ELS+ +   LD + 
Sbjct: 9   VSQLIEEKLASSSNYLVDVVIKPGN--LIVVEIDNDEA-VSIDDCAELSRYLEEHLDRD- 64

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI  P      +++  G+ V   +   S    KL G +    E G  
Sbjct: 65  --VEDYELEVGSAGITSPFKVLRQYVKNIGNEVEMLLKNGS----KLTGVLKSADENGVV 118

Query: 145 LEKEKRGEKDMNELQIAI------SFDSLLSAR 171
           +  EK+ + +  + ++ +      +FD +   +
Sbjct: 119 VSVEKKVKPEGAKRKVTVVEDESYTFDEIKYTK 151


>gi|329954142|ref|ZP_08295237.1| hypothetical protein HMPREF9445_00063 [Bacteroides clarus YIT
           12056]
 gi|328528119|gb|EGF55099.1| hypothetical protein HMPREF9445_00063 [Bacteroides clarus YIT
           12056]
          Length = 155

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 62/153 (40%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  ++   +++  +  V++ +  +  ++++I        + + DC ELS+ I   L+ E+
Sbjct: 7   VCQIVDEWLKDKDYFLVEVIISPDDKIVVEI---DHKEGVWIEDCVELSRYIESRLNRED 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +    G  V           +K  G +    E  F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYTNHIGKDVEVLAKDG----RKYCGTLKDADERQFT 116

Query: 145 LEKEKRGEKDMN------ELQIAISFDSLLSAR 171
           +  +K+ +++        +  I  +++ +   +
Sbjct: 117 VTVQKKVKEEGAKRPKMVDEDITFTYEEIKYTK 149


>gi|33862047|ref|NP_893608.1| hypothetical protein PMM1491 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|51316771|sp|Q7V002|RIMP_PROMP RecName: Full=Ribosome maturation factor rimP
 gi|33634265|emb|CAE19950.1| DUF150 [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
          Length = 155

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 70/158 (44%), Gaps = 10/158 (6%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISL-LEEKNLLLQIFVERDD-GNMTLRDCEELSQ 74
            D     ++ S++Q V +E + +   + +   +  ++++I + + +  ++TL DC   + 
Sbjct: 1   MDKECKSNLESLLQGVAKEFNLKIHSLDILTNQNPIIVKIIICKTNKDDITLDDCSRFNN 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
               +++  N++   Y LE+SS G+   +  + DF  + G  V  E+   +   + L G 
Sbjct: 61  PAISVIENSNLLNCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSQIKFLNGL 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           +   S+    +  + + +K          F+ +L   L
Sbjct: 121 LYEKSKDYLAINIKGKIKKI--------PFNEVLKVSL 150


>gi|258647227|ref|ZP_05734696.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
 gi|260852980|gb|EEX72849.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
          Length = 155

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 52/153 (33%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  ++   +    +++  +  ++++         + + DC +LS+ I   L+ + 
Sbjct: 7   VKQLVEEWLDGKDYFLTDLTVSPDDRIVVE---MDHVEGVWIEDCVDLSRYIEERLNRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      +       V           +KL G +       F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVHRQYEIHVDSPVVVLTGEG----KKLRGILTAVESDHFI 116

Query: 145 LEK------EKRGEKDMNELQIAISFDSLLSAR 171
           L        E        +  +   F+ +   +
Sbjct: 117 LTIKEKVRPEGAKRPQWVDKDLTFRFEDVKYTK 149


>gi|262382601|ref|ZP_06075738.1| UPF0090 protein [Bacteroides sp. 2_1_33B]
 gi|262295479|gb|EEY83410.1| UPF0090 protein [Bacteroides sp. 2_1_33B]
          Length = 157

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S +++  +   S   V + +      L+ + ++ D+  +++ DC ELS+ +   LD + 
Sbjct: 9   VSQLVEEKLASSSNYLVDVVIKPGN--LIVVEIDNDEA-VSIDDCAELSRYLEEHLDRD- 64

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI  P      +++  G+ V   +   S    KL G +    E G  
Sbjct: 65  --VEDYELEVGSAGITSPFKVLRQYVKNIGNEVEMLLKNGS----KLTGVLKSADENGVV 118

Query: 145 LEKEKRGEKDMNELQIAI------SFDSLLSAR 171
           +  EK+ + +  + ++ +      +FD +   +
Sbjct: 119 VSVEKKVKPEGAKRKVTVIEDESYTFDEIKYTK 151


>gi|19553192|ref|NP_601194.1| hypothetical protein NCgl1913 [Corynebacterium glutamicum ATCC
           13032]
 gi|62390828|ref|YP_226230.1| hypothetical protein cg2179 [Corynebacterium glutamicum ATCC 13032]
 gi|34223122|sp|Q8NP37|RIMP_CORGL RecName: Full=Ribosome maturation factor rimP
 gi|21324758|dbj|BAB99381.1| Uncharacterized BCR [Corynebacterium glutamicum ATCC 13032]
 gi|41326166|emb|CAF20329.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
           13032]
          Length = 178

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +S++I+P+     F    + + +             D    L   E  SQ I  + D
Sbjct: 6   TEILSALIEPLAASHKFDLEGLKVTKAGPKSAVAIKVDSDSRPDLDQLEVFSQEIGELFD 65

Query: 82  V-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                 E      Y LEVS+PG+D P+     + R  G +VA        D +K + +I 
Sbjct: 66  AAEQRGELNFGAGYTLEVSTPGVDNPLTLPRHWRRNRGRLVAL-----DQDGKKRVARIG 120

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFD-----SLLSAR 171
             ++    +   +R +K +    + ++        +  A+
Sbjct: 121 ALNDAETHVVLIERNKKLLEVTTLELAHSPRAVVEIEFAK 160


>gi|150010112|ref|YP_001304855.1| hypothetical protein BDI_3532 [Parabacteroides distasonis ATCC
           8503]
 gi|255012628|ref|ZP_05284754.1| hypothetical protein B2_01880 [Bacteroides sp. 2_1_7]
 gi|166990853|sp|A6LHR9|RIMP_PARD8 RecName: Full=Ribosome maturation factor rimP
 gi|149938536|gb|ABR45233.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 155

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S +I+  +   S   V + +      L+ + ++ D+  +++ DC ELS+ +   LD + 
Sbjct: 7   VSQLIEEKLASSSNYLVDVVIKPGN--LIVVEIDNDEA-VSIDDCAELSRYLEEHLDRD- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI  P      +++  G+ V   +   S    KL G +    E G  
Sbjct: 63  --VEDYELEVGSAGITSPFKVLRQYVKNIGNEVEMLLKNGS----KLTGVLKSADENGVV 116

Query: 145 LEKEKRGEKDMNELQIAI------SFDSLLSAR 171
           +  EK+ + +  + ++ +      +FD +   +
Sbjct: 117 VSVEKKVKPEGAKRKVTVVEDESYTFDEIKYTK 149


>gi|25028437|ref|NP_738491.1| hypothetical protein CE1881 [Corynebacterium efficiens YS-314]
 gi|23493722|dbj|BAC18691.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 192

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A +++++I PV+         + + +      + I ++ D     L   E +SQ I  + 
Sbjct: 16  AEELTALIAPVVATRHLDVEGLRVTKAGPKSTVAIKLDSDSRP-DLDLLEVVSQEIGELF 74

Query: 81  DV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D      E      Y LEVS+PG+D P+ +   + R    +V+ +       K+++    
Sbjct: 75  DAAEARGELSFGAGYLLEVSTPGVDMPLTQPRHWRRNRTRLVSLD----VDGKKRIARIG 130

Query: 136 MGTSETGFFLEKEKRGE 152
              +E    +  E+  +
Sbjct: 131 ALNAEETAVILIERNKK 147


>gi|298206856|ref|YP_003715035.1| hypothetical protein CA2559_01345 [Croceibacter atlanticus
           HTCC2559]
 gi|83849490|gb|EAP87358.1| hypothetical protein CA2559_01345 [Croceibacter atlanticus
           HTCC2559]
          Length = 153

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 72/160 (45%), Gaps = 18/160 (11%)

Query: 21  LAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           L   +  ++Q V+++  S   +  ++  + ++ + I  +     +T+ DC  +S+AI   
Sbjct: 2   LKEKVDKLLQAVLDDNPSLFLIDYNITNDNSIGILIDGDN---GVTVEDCITVSRAIEHN 58

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           LD E      + LEV S G    +     +++  G V++ +      + +K+  +++   
Sbjct: 59  LDREE---EDFSLEVGSIGATASLTLPRQYVKNIGRVLSVKT-----ETEKIEAELVSAD 110

Query: 140 ETGFFLEKEKRGEKDMN------ELQIAISFDSLLSARLI 173
           +    L+ + R  K +       E +  I ++ ++ A+++
Sbjct: 111 DNEIALKWKAREPKPVGKGKHTVEKEAVIPYEKIVEAKVM 150


>gi|302528543|ref|ZP_07280885.1| UPF0090 protein [Streptomyces sp. AA4]
 gi|302437438|gb|EFL09254.1| UPF0090 protein [Streptomyces sp. AA4]
          Length = 175

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 9/157 (5%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
           +     LA  +  ++   +    F    + + +     L   V   D  + L +  E+S+
Sbjct: 2   LHVPNELASRLEPIVAEAVTTAGFDLDSLEVQQAGRRQLVKVVVDSDDGVGLDEVAEVSR 61

Query: 75  AISPILDV-ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
            +S  LD  E+++   Y LEV+SPG+DRP+ ++  + R    +V              +G
Sbjct: 62  TVSAALDENEHVLASAYTLEVTSPGLDRPLTQRRHWRRARFRLVKIT---PVEGS-AYLG 117

Query: 134 KIMGTSETGFFLEKEKRGEK----DMNELQIAISFDS 166
           ++    E    +  + R +      + +  + + F  
Sbjct: 118 RVGHAGEKSVRVLADGRIKDVHYQSVAKAVVEVEFKQ 154


>gi|332881708|ref|ZP_08449356.1| hypothetical protein HMPREF9074_05149 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680347|gb|EGJ53296.1| hypothetical protein HMPREF9074_05149 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 155

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 59/153 (38%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V +S+  +  ++++  ++  +  + + DC ELS+ I   L  E 
Sbjct: 7   VKGLVEEWLEGRDYFLVDVSVSADDRIVVE--IDHAE-GVWIEDCVELSRFIESRLSREE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI +P      ++   G  V           +KL G +       F 
Sbjct: 64  ---EDYELEVGSAGIGQPFKVLQQYVNHVGSEVDVLTADG----RKLHGVLTAAGPEDFE 116

Query: 145 L------EKEKRGEKDMNELQIAISFDSLLSAR 171
           +      + E      + +  + + +  +   +
Sbjct: 117 VTMKVKKKLEGEKRPRLVDEAVTLRYTEVKYTK 149


>gi|189345842|ref|YP_001942371.1| hypothetical protein Clim_0298 [Chlorobium limicola DSM 245]
 gi|226703665|sp|B3EFA9|RIMP_CHLL2 RecName: Full=Ribosome maturation factor rimP
 gi|189339989|gb|ACD89392.1| protein of unknown function DUF150 [Chlorobium limicola DSM 245]
          Length = 176

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 17  GDMGLAGDISSVIQPVI--EEMSFRSVQISLLEEKNLL-LQIFVERDDGNMTLRDCEELS 73
            +  +   +   ++     +      V + +        ++I ++  D  + +  C   S
Sbjct: 4   MEEKIKACVLQALESAAGTKGEGVYLVSVRVKGAGKQTKIEILLDS-DTGIRIDQCSFFS 62

Query: 74  QAISPILDVEN----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + I  +L+ E     +    + L VSSPG+  P++    +LR  G ++          ++
Sbjct: 63  RRIRELLENEGGTPVLDGEDFDLMVSSPGLGEPLLMPRQYLRHTGRLLRVIWKDEQQSEK 122

Query: 130 KLIGKIMGTSETGFFLE-------KEKRGEKDMNELQIAISFDSLLSARLIVTDEL 178
            + G++    +T   +        K  +      +  I +  D ++ A  +   EL
Sbjct: 123 TVTGRLQQVLKTEGEITAVRLVPVKTGKKSAGNVQEPIELMLDCIVRA--VPEAEL 176


>gi|256838935|ref|ZP_05544445.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|301308162|ref|ZP_07214116.1| conserved hypothetical protein [Bacteroides sp. 20_3]
 gi|256739854|gb|EEU53178.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|300833632|gb|EFK64248.1| conserved hypothetical protein [Bacteroides sp. 20_3]
          Length = 155

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +S +++  +   S   V + +      L+ + ++ D+  +++ DC ELS+ +   LD + 
Sbjct: 7   VSQLVEEKLASSSNYLVDVVIKPGN--LIVVEIDNDEA-VSIDDCAELSRYLEEHLDRD- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                Y LEV S GI  P      +++  G+ V   +   S    KL G +    E G  
Sbjct: 63  --VEDYELEVGSAGITSPFKVLRQYVKNIGNEVEMLLKNGS----KLTGVLKSADENGVV 116

Query: 145 LEKEKRGEKDMNELQIAI------SFDSLLSAR 171
           +  EK+ + +  + ++ +      +FD +   +
Sbjct: 117 VSVEKKVKPEGAKRKVTVIEDESYTFDEIKYTK 149


>gi|116328715|ref|YP_798435.1| hypothetical protein LBL_2089 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330627|ref|YP_800345.1| hypothetical protein LBJ_0944 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281618|sp|Q04U33|RIMP_LEPBJ RecName: Full=Ribosome maturation factor rimP
 gi|122283500|sp|Q04ZJ3|RIMP_LEPBL RecName: Full=Ribosome maturation factor rimP
 gi|116121459|gb|ABJ79502.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124316|gb|ABJ75587.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 162

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 7/131 (5%)

Query: 49  KNLLLQIFVER---DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVR 105
            + L+++ ++      G+++L +CE++S+ +   L+  +       L+VSS G +R +  
Sbjct: 32  NHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERISPDLDFT-LKVSSAGAERKLHL 90

Query: 106 KSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT--SETGFFLEKEKRGEKDMNELQIAIS 163
             D  R+ G  V          ++   G            FLEK ++G+K   + Q  ++
Sbjct: 91  PEDIDRFRGIPVRLVFRSG-ESEKNQEGIFRIVNRDGDQVFLEKFQKGKKSAVKKQTTLN 149

Query: 164 FDSLLSARLIV 174
              +L   L V
Sbjct: 150 LKDILKGNLYV 160


>gi|294827764|ref|NP_711122.2| hypothetical protein LA_0941 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|293385607|gb|AAN48140.2| conserved hypothetical protein [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 123

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 58  ERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117
           E   G+++L +CE++S+ +   L+  +    +  L+VSS G +R +    D  R+ G  +
Sbjct: 5   EHPYGSVSLLECEQVSRKLKEELERISPDLDYT-LKVSSAGAERKLNLPGDLDRFRGIPI 63

Query: 118 ACEIVLSSGDKQKLIGKIMGT--SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175
                     +++  G             LEK ++G+K + + Q  ++   +L   L V 
Sbjct: 64  RLVFRS-EESEKEQEGIFRVVNRDGDQIVLEKFQKGKKSVVKKQTTLNLKDILKGNLYVN 122


>gi|313206786|ref|YP_004045963.1| hypothetical protein Riean_1300 [Riemerella anatipestifer DSM
           15868]
 gi|312446102|gb|ADQ82457.1| protein of unknown function DUF150 [Riemerella anatipestifer DSM
           15868]
          Length = 155

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 63/159 (39%), Gaps = 17/159 (10%)

Query: 19  MGLAGDISSVIQPVI-EEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M +   + +++   + E      + + +    +    + +   D  +TL+DC + S+AI 
Sbjct: 1   MSIKAQVETLLNDFLSEREDLFLIDLKVSAGDD---VVVILDGDNGVTLQDCLDASRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             +D E      + L+V S G+  P+ +   F +  G  +   +  SS    K+ G++  
Sbjct: 58  FNMDREE---HDFSLQVMSAGLSEPLTQIRQFRKNIGRDLDILLNDSS----KIEGELAR 110

Query: 138 TSETGFFLEKEKRGEKDMNELQI------AISFDSLLSA 170
             E    L    R  K++ + +I       I    +  A
Sbjct: 111 VEENKVVLILRYRKPKEIGKGKIDVEEEKEILLSDIKKA 149


>gi|78189425|ref|YP_379763.1| hypothetical protein Cag_1464 [Chlorobium chlorochromatii CaD3]
 gi|91208007|sp|Q3AQK5|RIMP_CHLCH RecName: Full=Ribosome maturation factor rimP
 gi|78171624|gb|ABB28720.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
          Length = 179

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 18/159 (11%)

Query: 35  EMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPILDVEN-IIEGHYRL 92
                 V ++L        L++ V+  D  + +  C  +S+ I   L+ ++  +     +
Sbjct: 24  AEGVYVVSVALKGRAGQQKLEVLVDS-DKGIAVEQCAWVSRRILEKLEEDDEPLSEEIAI 82

Query: 93  EVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS----------ETG 142
           EVSSPG+  P+     + R  G ++        G + ++ G +              ++ 
Sbjct: 83  EVSSPGLGTPLQLPRQYYRHLGKLLHVRYRTPEGAEAEIEGYLQEAQLDGVNGGDSADSV 142

Query: 143 FFLEKEKRGEKDMNE---LQIAISFDSLLSARLIVTDEL 178
             L+ + +G++  N      I +    ++ A  +   EL
Sbjct: 143 IVLKPKVQGKRPRNAQPLENIRLPLSRIIKA--VPEAEL 179


>gi|319441433|ref|ZP_07990589.1| ribosome maturation protein RimP [Corynebacterium variabile DSM
           44702]
          Length = 186

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 11/138 (7%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
             ++  + +P+   + F    +++               D    L   EELSQA+S   D
Sbjct: 6   EQELREIAEPLAASLGFDVEAVNITRAGAKSAVRLAVDGDTRPDLDQLEELSQAVSAEFD 65

Query: 82  VENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                        Y LE+++PG+D P+     F R  G +V          K+  I  + 
Sbjct: 66  ARETAGTLNFGPGYTLELTTPGLDTPLTAGRHFRRNVGRLVLLR------GKKLRIAGVD 119

Query: 137 GTSETGFFLEKEKRGEKD 154
              +   +L +    +KD
Sbjct: 120 EDGDGTVWLIRPAAKKKD 137


>gi|306836352|ref|ZP_07469330.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
 gi|304567712|gb|EFM43299.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
          Length = 179

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 13/155 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A  ++ ++QP +         I   +  K   + I ++ D    +    EE+S  IS   
Sbjct: 6   AQQLADLLQPRLAARGLDVEDIKTTKAGKKSQVIIRIDGDKRP-SSDVLEEVSDDISAFF 64

Query: 81  DV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D      E      Y LEVS+PG+D P+     + R  G  V              IG +
Sbjct: 65  DEKEETGELNFGAGYTLEVSTPGVDLPLTAPRHWRRNQGRKVTFN-RGDDKSHTARIGAL 123

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
               +    +  EK       E       +++  A
Sbjct: 124 NAAEDAVVLITSEKNEVHTEVER-----LENIAHA 153


>gi|225011159|ref|ZP_03701621.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-3C]
 gi|225004721|gb|EEG42681.1| protein of unknown function DUF150 [Flavobacteria bacterium
           MS024-3C]
          Length = 153

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 66/158 (41%), Gaps = 18/158 (11%)

Query: 22  AGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
             ++  ++   +EE  S   +   +  +K + + +  +     +TL+DC  +S+AI   L
Sbjct: 3   EKEVRILLDAALEENPSLFLIDFKVTTDKKISVVLDGD---TGVTLQDCMNVSRAIEHNL 59

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
           D E I    + L+V+S G   P+V    + +     +             + G ++   +
Sbjct: 60  DKETI---DFGLDVASAGATTPLVMPRQYKKNLQRSLTVRTENEV-----VEGNLIQILD 111

Query: 141 TGFFLEKEKRGEKDMNELQI------AISFDSLLSARL 172
            G  L+ + R  K + + ++       I+F  +  A++
Sbjct: 112 HGIVLQWKAREPKPIGKGKVTVTKEQEIAFTDIKEAKV 149


>gi|259507496|ref|ZP_05750396.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|34223119|sp|Q8FPA4|RIMP_COREF RecName: Full=Ribosome maturation factor rimP
 gi|259164881|gb|EEW49435.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 182

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNL-LLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A +++++I PV+         + + +      + I ++ D     L   E +SQ I  + 
Sbjct: 6   AEELTALIAPVVATRHLDVEGLRVTKAGPKSTVAIKLDSDSRP-DLDLLEVVSQEIGELF 64

Query: 81  DV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           D      E      Y LEVS+PG+D P+ +   + R    +V+ +       K+++    
Sbjct: 65  DAAEARGELSFGAGYLLEVSTPGVDMPLTQPRHWRRNRTRLVSLD----VDGKKRIARIG 120

Query: 136 MGTSETGFFLEKEKRGE 152
              +E    +  E+  +
Sbjct: 121 ALNAEETAVILIERNKK 137


>gi|78779968|ref|YP_398080.1| hypothetical protein PMT9312_1584 [Prochlorococcus marinus str. MIT
           9312]
 gi|91208012|sp|Q318Q1|RIMP_PROM9 RecName: Full=Ribosome maturation factor rimP
 gi|78713467|gb|ABB50644.1| Protein of unknown function DUF150 [Prochlorococcus marinus str.
           MIT 9312]
          Length = 155

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 64/150 (42%), Gaps = 2/150 (1%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGN--MTLRDCEELSQ 74
            +      + ++++ V   + ++   ++L   +N ++   + +      ++L DC   + 
Sbjct: 1   MNKEQKSRLENLLEKVANVLDYKICSVNLQTNQNPIVIKIIIKKTNGDDISLDDCALFNT 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
             S  ++  N+++  Y LE+SS G+   +  + DF  + G  V  E+   +   + L G 
Sbjct: 61  PASEEIENSNLLKCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSKIKFLNGL 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISF 164
           +   S+    +  + + +K      + IS 
Sbjct: 121 LYEKSKDYLAINIKGKIKKIPFNEVLKISL 150


>gi|294675007|ref|YP_003575623.1| hypothetical protein PRU_2369 [Prevotella ruminicola 23]
 gi|294474084|gb|ADE83473.1| conserved hypothetical protein [Prevotella ruminicola 23]
          Length = 155

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 63/159 (39%), Gaps = 16/159 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              I ++ +  ++   +  V ++   +    + I ++  D  + + DC  LS+ +   L 
Sbjct: 4   KEIIQTLTEEWLQGNEYFLVDVNFAADDR--IVIEIDHAD-GVWIEDCAALSRFLQERLG 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            E    G Y LEV S G+ +P      ++   G      + +   D +K+ G +      
Sbjct: 61  EE---LGEYELEVGSAGLGQPFKVAQQYMNHIGD----TLEVLQADGKKVQGTLKAVDAP 113

Query: 142 GFFLEKEKRGEKDMNELQIAIS------FDSLLSARLIV 174
            F +  +++ + +  +  + +        D +  A+ ++
Sbjct: 114 SFTITVQEKQKIEGKKRPVLVDVDKTYQMDEVKYAKYVL 152


>gi|258652413|ref|YP_003201569.1| hypothetical protein Namu_2203 [Nakamurella multipartita DSM 44233]
 gi|258555638|gb|ACV78580.1| protein of unknown function DUF150 [Nakamurella multipartita DSM
           44233]
          Length = 173

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 9/160 (5%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAI 76
              G  G + +V+  V     +   ++++       +   V   D  ++L D  E+S+ I
Sbjct: 1   MVDGDEGRLRAVVTEVTAARGYDLEELAVRSIGRRRVVRVVVDSDDGVSLDDAAEVSREI 60

Query: 77  SPILDVEN--IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           S  LD  +  + E  Y LEV+SPG+ RP+     F R  G ++             + G 
Sbjct: 61  SERLDGPDDPMGEHPYTLEVTSPGVGRPLREPRHFRRARGRLLVVTTEQGP-----VTGH 115

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++  S+TG  L      +K      + +   ++ +A++ V
Sbjct: 116 LLRASDTGIELAL--APDKKGVVTVVELPLTAIATAKVEV 153


>gi|227488650|ref|ZP_03918966.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227091544|gb|EEI26856.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 180

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 49/154 (31%), Gaps = 7/154 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +  +            +++  +E         +   + +  +    E S A+S + D
Sbjct: 6   EKTLLDIATETGRPWGLFPLRVKTVEAGPHSTVTVIVDSESDPDIDAVGEFSTALSQVFD 65

Query: 82  V-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                 E      Y LEVS+PGID P+ R   + R  G  V   +     +        +
Sbjct: 66  EKEASKELSFGAGYNLEVSTPGIDEPLTRPYQWARNRGRAVTVTLKG--QEPATYRIGAL 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              E    L   +  + +    +  ++   +  A
Sbjct: 124 SPEEDRVVLIYSEGTKGNKKAKKTIVALHDVKRA 157


>gi|227543253|ref|ZP_03973302.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227181062|gb|EEI62034.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 180

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 7/154 (4%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              +  +            +++  +E         +   + +  +    E S A+S + D
Sbjct: 6   EKTLLDIATETGRPWGLFPLRVKTVEAGPHSTVTVIVDSESDPDIDAVGEFSTALSQVFD 65

Query: 82  V-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIM 136
                 E      Y LEVS+PGID P+ R   + R  G  V+  +     +        +
Sbjct: 66  EKEASKELSFGAGYNLEVSTPGIDEPLTRPYQWARNRGRAVSVTLKG--QEPATYRIGAL 123

Query: 137 GTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
              E    L   +  + +    +  ++   +  A
Sbjct: 124 SPEEDRVVLIYSEGTKGNKKAKKTIVALHDVERA 157


>gi|150024571|ref|YP_001295397.1| hypothetical protein FP0468 [Flavobacterium psychrophilum JIP02/86]
 gi|259585775|sp|A6GWV6|RIMP_FLAPJ RecName: Full=Ribosome maturation factor rimP
 gi|149771112|emb|CAL42579.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 154

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 66/159 (41%), Gaps = 18/159 (11%)

Query: 19  MGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  +++  + E  +   + +++ +   +++ +  +     + L+DC  +S++I 
Sbjct: 1   MAFKEKVKELLEQGLAEYPNLFLIDLNINDSNKIIITLDGDN---GVQLQDCINISRSID 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E +    + LEV+S G+  P+     + +  G  +  +        Q +   ++ 
Sbjct: 58  NNLDREEV---DFALEVASAGVSLPLKLVRQYKKNIGRTLKIKTAT-----QTIEALLLE 109

Query: 138 TSETGFFLEKEKRGEKDMNELQIA------ISFDSLLSA 170
            S+    +E   R  K + + +        I++ ++  A
Sbjct: 110 VSDQDITVEWSSREPKKIGKGKETVVHNEKIAYAAIQEA 148


>gi|218509056|ref|ZP_03506934.1| hypothetical protein RetlB5_16765 [Rhizobium etli Brasil 5]
          Length = 83

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 119 CEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDEL 178
           CE  +   ++++  GKI+     GF LE+++       E +++I F +L  A+LI+TD+L
Sbjct: 1   CETSIMICNRKRFRGKIVEADADGFTLERDQIAY--GEEPKVSIPFTALSDAKLILTDDL 58

Query: 179 LRASLNNYG 187
           +R +L    
Sbjct: 59  IRDALRADK 67


>gi|256419697|ref|YP_003120350.1| hypothetical protein Cpin_0651 [Chitinophaga pinensis DSM 2588]
 gi|256034605|gb|ACU58149.1| protein of unknown function DUF150 [Chitinophaga pinensis DSM 2588]
          Length = 169

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 63/162 (38%), Gaps = 11/162 (6%)

Query: 13  PRIFGDMGLAGDISSVIQPVIEEM-SFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
                +  +   I  +   ++     +  V + +    N+ L  FV+  D  + +     
Sbjct: 13  RFFMANEQVITTIRDMAAEMLSPYPEYFVVDVRIKPTNNIKL--FVDG-DNGVPVDKLVA 69

Query: 72  LSQAISPILDVENIIEGHYR-LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
            ++ +   L+   +   +   LEVSSPG+D P+     +++  G  V   ++ +S     
Sbjct: 70  FNRNLYSRLEEATLFPDNDFSLEVSSPGLDEPLKLLRQYVKNIGRKVTVTLLDNSEK--- 126

Query: 131 LIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
             G ++  +E    +  E++  K   +    I+ + +   ++
Sbjct: 127 -EGTLLSATEAVVTI--EEQVGKKKEKKTTEINLNEIKHTKV 165


>gi|88802099|ref|ZP_01117627.1| hypothetical protein PI23P_05532 [Polaribacter irgensii 23-P]
 gi|88782757|gb|EAR13934.1| hypothetical protein PI23P_05532 [Polaribacter irgensii 23-P]
          Length = 153

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 16/154 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I  ++   +  ++     I L    N  +++ V+  D  + L +C  +S+ I   LD E 
Sbjct: 6   IKDLVDEAL-ALNDSLYLIELSISVNDKIKVVVDG-DNGVPLSECIRISKNIDANLDRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                + LEV++P I  P+  K  +L+    ++  +        ++  G +    E    
Sbjct: 63  --SEDFSLEVTTPDIAHPLKVKRQYLKNLNRILKVKTAA-----EEFEGTLTAADEDKII 115

Query: 145 LEKEKRGEKDMNE------LQIAISFDSLLSARL 172
           L+ + R  K++ +        I I+   ++ AR+
Sbjct: 116 LQWKAREPKEIGKGKVTVLKTITIAHTDIIEARV 149


>gi|126663077|ref|ZP_01734075.1| hypothetical protein FBBAL38_06985 [Flavobacteria bacterium BAL38]
 gi|126624735|gb|EAZ95425.1| hypothetical protein FBBAL38_06985 [Flavobacteria bacterium BAL38]
          Length = 155

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 65/159 (40%), Gaps = 17/159 (10%)

Query: 19  MGLAGDISSVIQPVIEEMS-FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  V+   + E      + +S+ E   + +   +   D  + L+DC ++S+A+ 
Sbjct: 1   MTFKNKVQEVLDAALAEREQLFLIDLSINEANKISV---ILDGDSGVNLQDCIDISRAVE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E      + LEV+S G+  P+     + +  G  +  + +        +  K+  
Sbjct: 58  NNLDREE---QDFSLEVASAGVSSPLKLVRQYKKNIGRTIKVKTISLEE----IEAKLTM 110

Query: 138 TSETGFFLEKEKRGEKDMN------ELQIAISFDSLLSA 170
             +    LE + R  K +       + ++ +S++++  A
Sbjct: 111 ADDEKITLEWQDREPKKIGKGKETVDKKLQLSYENIKEA 149


>gi|240146878|ref|ZP_04745479.1| protein associated with NUS operon [Roseburia intestinalis L1-82]
 gi|257200976|gb|EEU99260.1| protein associated with NUS operon [Roseburia intestinalis L1-82]
          Length = 74

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 22 AGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGNMTLRDCEELSQAISPIL 80
                +I P+++ M+F  V +  ++E     L+ ++++ +G +T+ DCE +++ ++ IL
Sbjct: 8  ETRTEELITPILDRMNFELVDVEYVKEGGAWYLRAYIDK-EGGITVNDCEAVAREMNEIL 66

Query: 81 DVENIIEG 88
          D E+ +E 
Sbjct: 67 DREDFVED 74


>gi|333029429|ref|ZP_08457490.1| Ribosome maturation factor rimP [Bacteroides coprosuis DSM 18011]
 gi|332740026|gb|EGJ70508.1| Ribosome maturation factor rimP [Bacteroides coprosuis DSM 18011]
          Length = 155

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 64/153 (41%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           +  +++  +E   +  V++S+  E +  + + ++  +  + + DC +LS+ I   L+ + 
Sbjct: 7   VHQIVEEWLEGKEYFLVEVSV--ESDDKIVVEIDHAE-GVWIEDCVDLSRFIESKLNRDE 63

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF- 143
                Y LEV S G+ +P      +    G  V            KLIG+++  +E G  
Sbjct: 64  ---EDYELEVGSAGVGQPFKVLQQYYNHIGRQVEVLEKTGI----KLIGELLDVTEDGIK 116

Query: 144 -----FLEKEKRGEKDMNELQIAISFDSLLSAR 171
                 ++ E      +  ++  I F+ +   +
Sbjct: 117 VAVEKKVKVEGSKRPKLIAVEEDIPFEKIKYTK 149


>gi|300933075|ref|ZP_07148331.1| hypothetical protein CresD4_03348 [Corynebacterium resistens DSM
           45100]
          Length = 200

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 37/183 (20%)

Query: 24  DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVE-----------------RDDGNMT 65
            + S+++ V+ +       I +        ++IFV+                  +     
Sbjct: 8   QLKSLLETVVHQYGCVIEDIQVARAGAKSSVKIFVDSEVAVPTTLASATEVQPHEFTGPD 67

Query: 66  LRDCEELSQAISPILDVENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120
           L   E+LS+ IS  LD             Y LEV S G   P+V+   +++  G +V   
Sbjct: 68  LDAVEQLSRDISAELDRAEEQGQLNFGPGYTLEVGSAGASAPIVKPRHWVKNLGRLVKL- 126

Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGE--------KDMNELQIAISFDSLLSA-- 170
                G  +    ++   +E G  L  +K  E        ++++  ++ I F  +  A  
Sbjct: 127 ---PEGPLKGAKARVAQAAEDGVILIFKKGKELNVSLHSLEEVSGARVEIEFSKVPEAEQ 183

Query: 171 RLI 173
            L+
Sbjct: 184 HLV 186


>gi|78187635|ref|YP_375678.1| hypothetical protein Plut_1781 [Chlorobium luteolum DSM 273]
 gi|78167537|gb|ABB24635.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 191

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 67/174 (38%), Gaps = 18/174 (10%)

Query: 14  RIFGDMGLAGDISSVIQPVIEE------MSFRSVQISLLEEK-NLLLQIFVERDDGNMTL 66
            I     +   I  ++Q ++E+           V +++     +  +++ ++  D  + +
Sbjct: 13  FIAMQGSIDSHIEGIVQNILEDSVGTKGEGVYLVAMTVKGSAVHRKIEVILD-ADSGVRI 71

Query: 67  RDCEELSQAISPILDVENIIE----GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIV 122
             C   ++ I   L+ +  +       + L V SPG+  P+V +  + R  G ++     
Sbjct: 72  DQCSFFARRIRERLEEDEALSGTMGEDFDLVVGSPGLGEPLVLRRQYGRHVGRLLRVWYR 131

Query: 123 LSSGDKQKLIGKIMGTS----ETGFFLEKEKRGEKDMNELQ--IAISFDSLLSA 170
            + G + ++ G +   S         L+ +   +K   E    + +  D++  A
Sbjct: 132 DTEGVEHEVAGHLQAVSLTEGGGSITLKPQTAKKKGRQEETEDMTLELDAVSRA 185


>gi|183220910|ref|YP_001838906.1| hypothetical protein LEPBI_I1523 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911006|ref|YP_001962561.1| hypothetical protein LBF_1470 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|226734181|sp|B0SH16|RIMP_LEPBA RecName: Full=Ribosome maturation factor rimP
 gi|226734677|sp|B0SQH2|RIMP_LEPBP RecName: Full=Ribosome maturation factor rimP
 gi|167775682|gb|ABZ93983.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167779332|gb|ABZ97630.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 162

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 68/164 (41%), Gaps = 11/164 (6%)

Query: 16  FGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLL-QIFVER---DDGNMTLRDCEE 71
           + +  +   I  V+ P +         + +   KN  L +I ++      G+ +L DCE 
Sbjct: 3   YTEENIRELILRVLAPPLA-----LFSLQVQNRKNHALIEIELDHLTDKTGSASLEDCET 57

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+ +   LD          L+VSS G +R +    D +R+ G +V  E+ L SG   K 
Sbjct: 58  VSRRLKEELDQWGEEFDFT-LQVSSAGAERVLRLPEDLIRFQGLLVKLEVPLESGKWDKR 116

Query: 132 IGKIMGTSETGFFLEK-EKRGEKDMNELQIAISFDSLLSARLIV 174
           + ++   S     L   +++     N+  +++    +    L +
Sbjct: 117 LYRLGPVSGDSVELTLYDRKTRHKKNQKSVSMPIAEIRKGNLYL 160


>gi|123966904|ref|YP_001011985.1| hypothetical protein P9515_16711 [Prochlorococcus marinus str. MIT
           9515]
 gi|166980184|sp|A2BYL7|RIMP_PROM5 RecName: Full=Ribosome maturation factor rimP
 gi|123201270|gb|ABM72878.1| DUF150 [Prochlorococcus marinus str. MIT 9515]
          Length = 155

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 70/150 (46%), Gaps = 2/150 (1%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD--DGNMTLRDCEELSQ 74
            D  L  ++  +++ V +E + +   ++LL  +N ++   + +   + ++T+ DC   + 
Sbjct: 1   MDKELKNNLEILLEEVAKEFNLKVYSLNLLTNQNPIIIKIIIKKTNEEDITIEDCSRFNN 60

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
             S +++  N+++  Y LE+SS G+   +  + DF  + G  V  E+   +   + L G 
Sbjct: 61  PASAVIENSNLLKCSYVLEISSQGVSDELTSERDFKTFKGFPVNVELNQKNSRIKLLNGL 120

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISF 164
           +   S+    +  + + +K      + IS 
Sbjct: 121 LYEKSKDYLAINIKGKIKKIPFNEVLKISL 150


>gi|84498574|ref|ZP_00997337.1| hypothetical protein JNB_20318 [Janibacter sp. HTCC2649]
 gi|84381107|gb|EAP96992.1| hypothetical protein JNB_20318 [Janibacter sp. HTCC2649]
          Length = 187

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 58/158 (36%), Gaps = 18/158 (11%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLL---------LQIFVERDD--GNMTLRDCEELS 73
           +  +I   +        ++ +                L++  +  +   +++L +    +
Sbjct: 7   VQELIDGALHGSGVVLEEVVVTPAGRRRVVRVVVDRALEVTGDVTETLPSLSLDEIASAT 66

Query: 74  QAISPILDVEN-IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
             +S  LD  + + E  Y LEV+SPG+ RP+   S F R  G +V          +  + 
Sbjct: 67  HTVSDALDESDVLGEQPYTLEVTSPGVSRPLTAASHFRRNVGRLVVLT---PQDGE-PVT 122

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           G+I+   +    L      +    +     ++ ++  A
Sbjct: 123 GRIVRAGDDDLTLLVPAVKKAPERDEI--FAYAAIDRA 158


>gi|317968932|ref|ZP_07970322.1| hypothetical protein SCB02_05303 [Synechococcus sp. CB0205]
          Length = 122

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 9/115 (7%)

Query: 60  DDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
           D G+++L +C   S  +   ++   +++  Y LEVSSPG+   +    DF  + G  V+ 
Sbjct: 11  DGGDVSLDNCASFSGVLGDAIENSGLLQDPYVLEVSSPGVSEQLSDDRDFRSFRGFPVSI 70

Query: 120 EIVL-SSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 SG   +  G ++   E    L    R         + I    ++S +L+
Sbjct: 71  RYRDTKSGGDNEREGLLLERDEENVLLNVRGR--------TVRIPRPDVISVKLV 117


>gi|325971225|ref|YP_004247416.1| ribosome maturation factor rimP [Spirochaeta sp. Buddy]
 gi|324026463|gb|ADY13222.1| Ribosome maturation factor rimP [Spirochaeta sp. Buddy]
          Length = 166

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 57/144 (39%), Gaps = 5/144 (3%)

Query: 30  QPVIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG 88
           +P++  M    V+I  +    ++++ + +   +  +++  C ++   ++       + E 
Sbjct: 16  EPLLNAMGIALVEINRVDRGNSVIVTMVIVAKETEVSIDHCAKV-YRLAYPRMELQLGER 74

Query: 89  HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKE 148
             +LEVS+PG+ R      +F  + G             +  + G I    E    L + 
Sbjct: 75  DLQLEVSTPGLQRTFKDVYEFSLFTGKRARVYDTS---KEAWVSGIITQADEKTVQLAQV 131

Query: 149 KRGEKDMNELQIAISFDSLLSARL 172
              ++      +++ F  +  A+L
Sbjct: 132 YIEDEKEMIDTMSVEFSVIQKAKL 155


>gi|213026073|ref|ZP_03340520.1| hypothetical protein Salmonelentericaenterica_28018 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 59

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           +S  +S +LDVE+ I   Y LEVSSPG+DRPM     + R+ G  VA  + ++  +++K
Sbjct: 1   MSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRK 59


>gi|239917226|ref|YP_002956784.1| hypothetical protein Mlut_06980 [Micrococcus luteus NCTC 2665]
 gi|281414300|ref|ZP_06246042.1| hypothetical protein MlutN2_03688 [Micrococcus luteus NCTC 2665]
 gi|239838433|gb|ACS30230.1| uncharacterized conserved protein [Micrococcus luteus NCTC 2665]
          Length = 195

 Score = 56.9 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 23/179 (12%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M+ST       E R   +  LA D   V+   +               ++  +++ ++R 
Sbjct: 1   MDSTDRRDDHAELRTRVEEALAAD--DVVVEQVRATG---------TAEHRTVEVVLDRA 49

Query: 61  D--GNMTLRDCEELSQAISPILD-----VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN 113
                ++L D   LS  +S  LD     V  +  G Y LEV++ G+DRP+       R  
Sbjct: 50  SGTYGLSLDDVARLSGRVSAALDALGDHVPGVGAGEYLLEVTTAGVDRPLTEPRHLARNV 109

Query: 114 GHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G +V             +  ++   ++    L   +   K    ++  +  + +   RL
Sbjct: 110 GRLVEVS----VDGAAPVTARLKDVTDDDVELAVVRPPAKKGMRVK-ELPAERVALDRL 163


>gi|119356206|ref|YP_910850.1| hypothetical protein Cpha266_0367 [Chlorobium phaeobacteroides DSM
           266]
 gi|259585750|sp|A1BDE9|RIMP_CHLPD RecName: Full=Ribosome maturation factor rimP
 gi|119353555|gb|ABL64426.1| protein of unknown function DUF150 [Chlorobium phaeobacteroides DSM
           266]
          Length = 173

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 68/176 (38%), Gaps = 17/176 (9%)

Query: 17  GDMGLAGDISSVIQPVI--EEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
            +  +   +  V++     +      V +S+    K   +++ V+  D  + +  C  LS
Sbjct: 1   MEEKIRRCVLQVLEATAGTKGEGVYLVSLSIKGSGKGTSIEVLVDT-DTGIRIDQCAFLS 59

Query: 74  QAISPILDVENIIE----GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + I   L+VE   +      + L+V+SPG+ + ++ +  + R  G +         G   
Sbjct: 60  RRIRECLEVEEESDGMSGDDFNLDVASPGLGKAIILQRQYARHVGRLFRVTFREEDGSMT 119

Query: 130 KLIGKIMGT---SETGFFLEKE----KRGEKDMNELQIAISFDSLLSARLIVTDEL 178
           ++ G +       E    L  E    K+  K ++     +  D ++ A  +   EL
Sbjct: 120 EISGHLREILFPEEENASLVIEPLGKKKAGKKVSSENRTLRLDRVIRA--VPEAEL 173


>gi|34223166|sp|Q9Z5J2|RIMP_MYCLE RecName: Full=Putative ribosome maturation factor rimP
          Length = 150

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 2/97 (2%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDC-EELSQAISPILDV 82
            +  ++   +    +    + +         I V  D   +  RD    LS ++S +LD 
Sbjct: 10  QVIELLGGEVARAGYEVEDVIIHTWSQPF-WITVLADGDTVLARDIIATLSHSVSALLDG 68

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVAC 119
            + I   Y LEVSS G+ RP   +  F R  G  V  
Sbjct: 69  LDNIVDRYFLEVSSLGMGRPFTSEKHFRRARGRKVEL 105


>gi|34540098|ref|NP_904577.1| hypothetical protein PG0253 [Porphyromonas gingivalis W83]
 gi|51316749|sp|Q7MXE6|RIMP_PORGI RecName: Full=Ribosome maturation factor rimP
 gi|34396409|gb|AAQ65476.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 152

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 53/154 (34%), Gaps = 16/154 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             I  ++   +       V++++     +L+++        + + +C  LS+ I   +D 
Sbjct: 5   EQIVRIVSDYLSTGETFLVEVAIHPGNRILVEL---DSAQGVCIDECVALSRHIESQVDR 61

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +      Y LEV S G+  P+     +       ++  +        K  G+++  +   
Sbjct: 62  D---IEDYELEVGSTGLTSPLKVMRQWENCIDSELSVLLTNGM----KETGRLITVAPEA 114

Query: 143 FFLEK------EKRGEKDMNELQIAISFDSLLSA 170
             LE       E    K     ++ I    +  A
Sbjct: 115 IKLEVVRMVKPEGAKRKKPETQELTIVMADIKQA 148


>gi|237785728|ref|YP_002906433.1| hypothetical protein ckrop_1145 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259585744|sp|C4LJ85|RIMP_CORK4 RecName: Full=Ribosome maturation factor rimP
 gi|237758640|gb|ACR17890.1| hypothetical protein ckrop_1145 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 189

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 16/166 (9%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
           A +I+  +Q ++        ++ + +      + I ++ D     L   EELS  IS   
Sbjct: 6   AEEITQRVQQIVGPRGLDVEKVDIKKAGAKSAVIIRIDGDQRP-DLDVIEELSDEISRNF 64

Query: 81  DVENIIEG-----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ------ 129
           D             YRLEVS+PG D P++    F R  GH+    +  +  +        
Sbjct: 65  DAAESDGELNFGAGYRLEVSTPGFDEPLLAARHFRRQRGHIATFVLNQADDEHATANAAN 124

Query: 130 -KLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
            + + ++   +     L     G+K+ +        D +  A+L V
Sbjct: 125 ARFVARVGALNADETELAVVLPGKKEPSVKTY--PLDQIREAKLEV 168


>gi|188994217|ref|YP_001928469.1| hypothetical protein PGN_0353 [Porphyromonas gingivalis ATCC 33277]
 gi|259586179|sp|B2RHM7|RIMP_PORG3 RecName: Full=Ribosome maturation factor rimP
 gi|188593897|dbj|BAG32872.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 152

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 53/154 (34%), Gaps = 16/154 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
             I  ++   +       V++++     +L+++        + + +C  LS+ I   +D 
Sbjct: 5   EQIVRIVSDYLSTGETFLVEVAIHPGNRILVEL---DSAQGVCIDECVALSRHIESQVDR 61

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           +      Y LEV S G+  P+     +       ++  +        K  G+++  +   
Sbjct: 62  DL---EDYELEVGSTGLTSPLKVMRQWENCIDSELSVLLTNGM----KETGRLITVAPEA 114

Query: 143 FFLEK------EKRGEKDMNELQIAISFDSLLSA 170
             LE       E    K     ++ I    +  A
Sbjct: 115 IKLEVVRMVKPEGAKRKKPETQELTIVMADIKQA 148


>gi|319951027|ref|ZP_08024891.1| ribosome maturation protein RimP [Dietzia cinnamea P4]
 gi|319435307|gb|EFV90563.1| ribosome maturation protein RimP [Dietzia cinnamea P4]
          Length = 181

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 32  VIEEMSFRSVQI-SLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHY 90
            + +       I          + I V+  D  ++L D  +LS  + P+ +     +   
Sbjct: 14  AVSDRGLDLEDIREDARSSAWRVTIVVDG-DAGVSLDDLADLSTDLDPLAEGWGGPDRPV 72

Query: 91  RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150
            LEV+S G+D P+ +   + R  G  V    V  +    +     +        L     
Sbjct: 73  TLEVTSRGVDAPLEQPRHWRRARGRQVDITYVQGAKGPARARVGDLDEGAGVVRLVSGAG 132

Query: 151 GEKDMNELQIAISFDSLLSA------RLIVTDEL 178
            EK +      ++ D +  A      R    DEL
Sbjct: 133 REKKVEP----VALDQVAHAVIRVEFRPAPQDEL 162


>gi|51599051|ref|YP_073239.1| hypothetical protein BG0825 [Borrelia garinii PBi]
 gi|81609733|sp|Q65ZX4|RIMP_BORGA RecName: Full=Ribosome maturation factor rimP
 gi|51573622|gb|AAU07647.1| conserved hypothetical protein [Borrelia garinii PBi]
          Length = 145

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 64/151 (42%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++++    +    +QI +   D ++ +    +L + I  +L +
Sbjct: 10  EVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKDFSLGIDLLTDLHKMI--LLIL 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E  +E  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 68  EASLEYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K         ++ +S+  +  ARL+
Sbjct: 115 ILESKSKSFIFKTESKELNVSYSDVKKARLV 145


>gi|91208390|sp|Q3B1Z6|RIMP_PELLD RecName: Full=Ribosome maturation factor rimP
          Length = 176

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 66/171 (38%), Gaps = 18/171 (10%)

Query: 17  GDMGLAGDISSVIQPVIEE------MSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDC 69
               +   I  ++Q ++E+           V +++     +  +++ ++  D  + +  C
Sbjct: 1   MQGSIDSHIEGIVQNILEDSVGTKGEGVYLVAMTVKGSAVHRKIEVILD-ADSGVRIDQC 59

Query: 70  EELSQAISPILDVENIIE----GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSS 125
              ++ I   L+ +  +       + L V SPG+  P+V +  + R  G ++      + 
Sbjct: 60  SFFARRIRERLEEDEALSGTMGEDFDLVVGSPGLGEPLVLRRQYGRHVGRLLRVWYRDTE 119

Query: 126 GDKQKLIGKIMGTS----ETGFFLEKEKRGEKDMNELQ--IAISFDSLLSA 170
           G + ++ G +   S         L+ +   +K   E    + +  D++  A
Sbjct: 120 GVEHEVAGHLQAVSLTEGGGSITLKPQTAKKKGRQEETEDMTLELDAVSRA 170


>gi|86742246|ref|YP_482646.1| hypothetical protein Francci3_3565 [Frankia sp. CcI3]
 gi|123750811|sp|Q2J725|RIMP_FRASC RecName: Full=Ribosome maturation factor rimP
 gi|86569108|gb|ABD12917.1| protein of unknown function DUF150 [Frankia sp. CcI3]
          Length = 268

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 12/159 (7%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
           G+   + + +   + +  F    +++    +  +   V   DG + L    + S+  S +
Sbjct: 41  GVRTALRARLAAGLADAGFDLEDVTVTRAGSRSVVRVVVDRDGGVDLDAVADASRLASEL 100

Query: 80  LDVEN-----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
           LD        ++ G Y LEV+SPG++RP+     + R  G +V             L G+
Sbjct: 101 LDAAETDGQGLVAGPYVLEVTSPGVERPLTEPRHWRRAIGRLVTVRDRDGI----VLAGR 156

Query: 135 IMGTSETGFFLEK---EKRGEKDMNELQIAISFDSLLSA 170
           ++   E+G  L       R  +        ++F  +  A
Sbjct: 157 VLSADESGADLAVATDPARPGRPPRRRLARVTFAQVARA 195


>gi|227872000|ref|ZP_03990385.1| conserved hypothetical protein [Oribacterium sinus F0268]
 gi|227842143|gb|EEJ52388.1| conserved hypothetical protein [Oribacterium sinus F0268]
          Length = 108

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 23 GDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFV-ERDDGNMTLRDCEELSQAISPIL 80
              + ++ ++  M +    ++   E     L+ F+  +D+ +MT+ DC  +S+ +S  L
Sbjct: 4  ERTKAYLEEILPGMGYVLDSVTYTIEAGTHYLRAFIFRKDEQDMTVNDCAMVSRRLSKWL 63

Query: 81 DVENIIEGHYRLEVSSPG 98
          D E+ I   Y LEV S G
Sbjct: 64 DKEDFIAEEYILEVCSLG 81


>gi|146299388|ref|YP_001193979.1| hypothetical protein Fjoh_1628 [Flavobacterium johnsoniae UW101]
 gi|146153806|gb|ABQ04660.1| protein of unknown function DUF150 [Flavobacterium johnsoniae
           UW101]
          Length = 166

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 72/170 (42%), Gaps = 20/170 (11%)

Query: 13  PRIFGDMGLAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
           P  +  M     ++ +I + ++E+ S   + +++ +   + + +  +     + L+DC +
Sbjct: 7   PSFYKIMTFKEKVNELITEALLEKPSIFLIDLAVSDSFKISVGLDGDN---GVALQDCID 63

Query: 72  LSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL 131
           +S+AI   LD E      + LEV+S G+  P+     + +  G  +           +K+
Sbjct: 64  ISRAIENNLDREE---QDFSLEVASVGVGSPLKLIRQYKKNIGRTLIVTTNN-----EKI 115

Query: 132 IGKIMGTSETGFFLEKEKRGEKDMNE------LQIAISFDSLLSARLIVT 175
             +++  ++    L  + R  K + +       +  I +  +  A  +VT
Sbjct: 116 EAELIEANDVFIILSWKAREPKKVGKGKETVQKEQQIPYTEIKEA--VVT 163


>gi|50365107|ref|YP_053532.1| hypothetical protein Mfl291 [Mesoplasma florum L1]
 gi|81391892|sp|Q6F1H5|RIMP_MESFL RecName: Full=Ribosome maturation factor rimP
 gi|50363663|gb|AAT75648.1| unknown protein [Mesoplasma florum L1]
          Length = 164

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 64/156 (41%), Gaps = 6/156 (3%)

Query: 20  GLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVER---DDGNMTLRDCEELSQA 75
            +  +I  + + +++E + +  +I+   + ++ +LQI VE     +  +        ++ 
Sbjct: 6   SIKDEIQKIAESILKEYNLQIYEINNFFDFESDVLQILVEDITEPNKALDFDSIISSNEK 65

Query: 76  ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKI 135
           +S  L+    +   Y LEV+S GI++P+  K + ++     +  E+        ++ G +
Sbjct: 66  LSDALENFPGLSEPYMLEVASAGIEKPIRSKDELVKAVNSYIHVELNQEKNTSSEIEGIL 125

Query: 136 MGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +                    + ++   ++ +  AR
Sbjct: 126 LDFDVNKDTFRIT--YFLKGQKKKVDFKYEQVKFAR 159


>gi|289705160|ref|ZP_06501563.1| conserved hypothetical protein [Micrococcus luteus SK58]
 gi|289558104|gb|EFD51392.1| conserved hypothetical protein [Micrococcus luteus SK58]
          Length = 195

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 23/179 (12%)

Query: 1   MESTHFLHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERD 60
           M+ST       E R   +  LA D   V+   +               ++  +++ ++R 
Sbjct: 1   MDSTDRRDDLAELRTRVEEALAAD--DVVVEQVRATG---------TAEHRTVEVVLDRA 49

Query: 61  D--GNMTLRDCEELSQAISPILD-----VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN 113
                ++L D   LS  +S  LD     V  +  G Y LEV++ G+DRP+     F R  
Sbjct: 50  SGTQGLSLDDVARLSGRVSAALDALGDHVPGVGAGEYLLEVTTAGVDRPLTEPRHFARNV 109

Query: 114 GHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           G +V             +  ++   +     L   +   K   + +  +  + +   RL
Sbjct: 110 GRLVEVS----VDGAAPVTARLKDVTADDVELAVVRPPAKKGMKAK-ELPAERVALDRL 163


>gi|291460013|ref|ZP_06599403.1| hypothetical protein GCWU000341_02180 [Oribacterium sp. oral
          taxon 078 str. F0262]
 gi|291417354|gb|EFE91073.1| hypothetical protein GCWU000341_02180 [Oribacterium sp. oral
          taxon 078 str. F0262]
          Length = 98

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 21 LAGDISSVI-QPVIEEMSFRSVQISLLEEKN-LLLQIFV-ERDDGNMTLRDCEELSQAIS 77
          +     + + + +   + +    +S   E     L++F+  +D   MT  DC  +S+ +S
Sbjct: 2  ITEKTEAYLREELAPSLGYELDSVSYTREDGVNYLRVFILRKDGEPMTTDDCAAVSRPLS 61

Query: 78 PILDVENIIEGHYRLEVSSPG 98
            LD E+ IE  Y LEV S G
Sbjct: 62 RWLDKEDFIEDEYVLEVCSLG 82


>gi|219685672|ref|ZP_03540486.1| conserved hypothetical protein [Borrelia garinii Far04]
 gi|219672788|gb|EED29813.1| conserved hypothetical protein [Borrelia garinii Far04]
          Length = 145

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 63/151 (41%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++++    +    +QI +   + ++ +    +L + I  +L +
Sbjct: 10  EVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKNFSLGIDLLTDLHKII--LLIL 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E  +E  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 68  EASLEYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K         ++ + +  +  ARL+
Sbjct: 115 ILESKSKSFIFKTESKELNVFYSDVKKARLV 145


>gi|219684915|ref|ZP_03539856.1| conserved hypothetical protein [Borrelia garinii PBr]
 gi|219671653|gb|EED28709.1| conserved hypothetical protein [Borrelia garinii PBr]
          Length = 145

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 63/151 (41%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++++    +    +QI +   + ++ +    +L + I  +L +
Sbjct: 10  EVYNLIKNLTERLNIEILEVNIFRNKNGGKIQIVLYSKNFSLGIDLLTDLHKMI--LLIL 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E  +E  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 68  EASLEYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K         ++ + +  +  ARL+
Sbjct: 115 ILESKSKSFIFKTESKELNVFYSDVKKARLV 145


>gi|15595144|ref|NP_212933.1| hypothetical protein BB0799 [Borrelia burgdorferi B31]
 gi|226320844|ref|ZP_03796396.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
 gi|2688749|gb|AAC67155.1| conserved hypothetical protein [Borrelia burgdorferi B31]
 gi|226233710|gb|EEH32439.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
          Length = 162

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 65/160 (40%), Gaps = 16/160 (10%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           +        ++ ++I+ +   ++   ++I+    + N  +QI +   + ++ +    +L 
Sbjct: 18  LIKYFDKNNEVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIVLYSKNFSLDIDFLTDLH 77

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + I  +L +E  ++  + LE+S+PGIDR +    +F  + G  +   +            
Sbjct: 78  KMI--LLILEANLKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDN---------- 125

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 E      K K      +  ++ + +  +  ARL+
Sbjct: 126 ---EFEEGFILESKPKSFIFKTDSKEVNVFYSDVKKARLV 162


>gi|167751797|ref|ZP_02423924.1| hypothetical protein ALIPUT_00038 [Alistipes putredinis DSM 17216]
 gi|167660038|gb|EDS04168.1| hypothetical protein ALIPUT_00038 [Alistipes putredinis DSM 17216]
          Length = 155

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 49/154 (31%), Gaps = 16/154 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83
            I+ +    +       V  +      + L I     D ++ +  C ELS+AI    D +
Sbjct: 6   KITEIANAKLVGTDLFVVDCTCSPANEVELLI---DSDTSVGIETCVELSRAIEAEFDRD 62

Query: 84  NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF 143
                 + L V+S GI   +     + +  G  V   +        K++  +    + G 
Sbjct: 63  ---TEDFSLTVASAGIGSELKHLRQYRKLIGKPVEVLLKSGV----KILATLDEADQEGL 115

Query: 144 FLE------KEKRGEKDMNELQIAISFDSLLSAR 171
            L        E +  K    +     F  +   +
Sbjct: 116 TLSYEEKQAVEGKKRKQTVRVTRRYPFSEIKYTK 149


>gi|259585818|sp|A5FJF7|RIMP_FLAJ1 RecName: Full=Ribosome maturation factor rimP
          Length = 154

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 70/164 (42%), Gaps = 20/164 (12%)

Query: 19  MGLAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     ++ +I + ++E+ S   + +++ +   + + +  +     + L+DC ++S+AI 
Sbjct: 1   MTFKEKVNELITEALLEKPSIFLIDLAVSDSFKISVGLDGDN---GVALQDCIDISRAIE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E      + LEV+S G+  P+     + +  G  +           +K+  +++ 
Sbjct: 58  NNLDREE---QDFSLEVASVGVGSPLKLIRQYKKNIGRTLIVTTNN-----EKIEAELIE 109

Query: 138 TSETGFFLEKEKRGEKDMNE------LQIAISFDSLLSARLIVT 175
            ++    L  + R  K + +       +  I +  +  A  +VT
Sbjct: 110 ANDVFIILSWKAREPKKVGKGKETVQKEQQIPYTEIKEA--VVT 151


>gi|156319550|ref|XP_001618133.1| hypothetical protein NEMVEDRAFT_v1g225486 [Nematostella vectensis]
 gi|156197569|gb|EDO26033.1| predicted protein [Nematostella vectensis]
          Length = 271

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 59/146 (40%), Gaps = 8/146 (5%)

Query: 19  MGLAGDISSVI-QPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAIS 77
           M     +  ++   ++E      + + + E   + + +  +     ++L+DC ++S+ + 
Sbjct: 1   MTFKEKVEKLLDAAILERDHLFLIDLKIDEANKINIVLDGDN---GVSLQDCVDISRLVE 57

Query: 78  PILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
             LD E      + LEV+S G+  P+     + +  G  +  ++V+ + +++  I     
Sbjct: 58  QDLDREE---NDFSLEVASAGLSSPLKLVRQYKKNIGRKLKAKVVVEAKEEKPEIIAAPK 114

Query: 138 TS-ETGFFLEKEKRGEKDMNELQIAI 162
                    + E+   +     ++ +
Sbjct: 115 LEVTEKVTPKAEEPKVESSTVEKVEV 140


>gi|291513590|emb|CBK62800.1| Uncharacterized protein conserved in bacteria [Alistipes shahii WAL
           8301]
          Length = 155

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 55/156 (35%), Gaps = 16/156 (10%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILD 81
              I    +  +E      V+ +      + L I     D ++ +  C ELS+A+    D
Sbjct: 4   TKKIIEAAERHLEGSDMFVVECTSTPGNEIELTI---DSDTSVGIDACAELSRAVEAQFD 60

Query: 82  VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141
            +      + L V S GI   +     + +  G      +        K++ K+   ++ 
Sbjct: 61  RDE---EDFSLTVMSAGIGSELKSLRQYRKLAGKSAEVLLTSGV----KILAKLEEVTDE 113

Query: 142 GFFLE------KEKRGEKDMNELQIAISFDSLLSAR 171
           G  L        E + +K + ++  +  FD +   +
Sbjct: 114 GITLSYEEKQAVEGKKKKQLVKVTRSYPFDQIKYTK 149


>gi|163839409|ref|YP_001623814.1| putative cytoplasmic protein [Renibacterium salmoninarum ATCC
           33209]
 gi|162952885|gb|ABY22400.1| hypothetical cytosolic protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 149

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 8/122 (6%)

Query: 55  IFVERDDG---NMTLRDCEELSQAISPILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFL 110
           + V+  +    ++ L    E+S A+S  LD +   +G  + LEVSSPG+ R +     + 
Sbjct: 3   VVVDLPEDQQGSVGLDKIAEVSLALSSALDADPEDDGRPFDLEVSSPGVGRSLTELRHWR 62

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIA---ISFDSL 167
           R  G +   ++  S   +  L G+I+  S  G  +  E   +K M   Q     I F  +
Sbjct: 63  RALGRMATLKLRKSEQGE-SLFGRIIEVSPDGVKIRPELPVKKGMKPKQAEPEFIEFAQI 121

Query: 168 LS 169
             
Sbjct: 122 RK 123


>gi|238783517|ref|ZP_04627539.1| hypothetical protein yberc0001_8610 [Yersinia bercovieri ATCC
           43970]
 gi|238797554|ref|ZP_04641051.1| hypothetical protein ymoll0001_5240 [Yersinia mollaretii ATCC
           43969]
 gi|238715572|gb|EEQ07562.1| hypothetical protein yberc0001_8610 [Yersinia bercovieri ATCC
           43970]
 gi|238718551|gb|EEQ10370.1| hypothetical protein ymoll0001_5240 [Yersinia mollaretii ATCC
           43969]
          Length = 66

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 8/72 (11%)

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
           M     + R+ G  V   + ++  +++K  G I         +  + + E          
Sbjct: 1   MFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTVDGKDEV--------F 52

Query: 163 SFDSLLSARLIV 174
           +  ++  A L+ 
Sbjct: 53  ALSNIQKANLVP 64


>gi|195941990|ref|ZP_03087372.1| hypothetical protein Bbur8_03844 [Borrelia burgdorferi 80a]
 gi|221217609|ref|ZP_03589078.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|223889333|ref|ZP_03623920.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|224533432|ref|ZP_03674025.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225549379|ref|ZP_03770351.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|225550239|ref|ZP_03771198.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|259016310|sp|O51739|RIMP_BORBU RecName: Full=Ribosome maturation factor rimP
 gi|221192555|gb|EEE18773.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
 gi|223885254|gb|EEF56357.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
 gi|224513394|gb|EEF83752.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
 gi|225369107|gb|EEG98561.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
 gi|225370007|gb|EEG99448.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
 gi|312149294|gb|ADQ29365.1| conserved hypothetical protein [Borrelia burgdorferi N40]
          Length = 145

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 64/151 (42%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ +   ++   ++I+    + N  +QI +   + ++ +    +L + I  +L +
Sbjct: 10  EVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIVLYSKNFSLDIDFLTDLHKMI--LLIL 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E  ++  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 68  EANLKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K      +  ++ + +  +  ARL+
Sbjct: 115 ILESKPKSFIFKTDSKEVNVFYSDVKKARLV 145


>gi|216264912|ref|ZP_03436904.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|218249670|ref|YP_002375298.1| hypothetical protein BbuZS7_0829 [Borrelia burgdorferi ZS7]
 gi|224532422|ref|ZP_03673050.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|226321264|ref|ZP_03796792.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
 gi|226708090|sp|B7J0P5|RIMP_BORBZ RecName: Full=Ribosome maturation factor rimP
 gi|215981385|gb|EEC22192.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
 gi|218164858|gb|ACK74919.1| conserved hypothetical protein [Borrelia burgdorferi ZS7]
 gi|224512645|gb|EEF83018.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
 gi|226233296|gb|EEH32047.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
          Length = 145

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 64/151 (42%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ +   ++   ++I+    + N  +QI +   + ++ +    +L + I  +L +
Sbjct: 10  EVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIVLYSKNFSLDIDFLTDLHKII--LLIL 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E  ++  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 68  EANLKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K      +  ++ + +  +  ARL+
Sbjct: 115 ILESKPKSFIFKTDSKEVNVFYSDVKKARLV 145


>gi|296117672|ref|ZP_06836256.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
           20306]
 gi|295969403|gb|EFG82644.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
           20306]
          Length = 179

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 56/151 (37%), Gaps = 10/151 (6%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +   + P++ +      QI   +  K   + I ++ +    +    EE+S+ I    
Sbjct: 6   EQKLEDFLTPILAKHDLDVEQIKTTKAGKKSQVVIRIDGEKRP-SSDVLEEMSRTIGDAF 64

Query: 81  DV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLI 132
           D      E      Y LEVS+PG+D P+     F R  G  +   +         + +  
Sbjct: 65  DAAEEAGELNFGAGYTLEVSTPGVDLPLTAPRHFRRNRGRKIKSSLGEVRIGALSEDEQN 124

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAIS 163
             ++ ++     ++ ++      + ++I  +
Sbjct: 125 VIVVTSARDIAKVQVQRLENLVGSVVEIEFA 155


>gi|260905193|ref|ZP_05913515.1| putative uncharacterized Bcr YhbC family protein [Brevibacterium
           linens BL2]
          Length = 154

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 54/157 (34%), Gaps = 16/157 (10%)

Query: 23  GDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDD---GNMTLRDCEELSQAISP 78
             I  +++  ++   F    +  +   +   L + V+ D+     M++    E S+ +  
Sbjct: 6   AQIEELLREPLQASGFYLESVKAVAAGQRRALTVVVDLDESSTEPMSMDKIAESSRLVGD 65

Query: 79  ILDVENIIEG-HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
            LD   +     Y+LEV+SPG  R +     F R  G  +          K      +  
Sbjct: 66  TLDEVEVFRDKPYQLEVTSPGATRKLEAPRHFKRVLGRRLEISTK-----KDTFKLDLDD 120

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +          G    +  +  +    ++ A++ +
Sbjct: 121 VGDHSIS------GIDPASREKRTVKLGDIVKAQVEL 151


>gi|194333209|ref|YP_002015069.1| hypothetical protein Paes_0365 [Prosthecochloris aestuarii DSM 271]
 gi|259586180|sp|B4S4S4|RIMP_PROA2 RecName: Full=Ribosome maturation factor rimP
 gi|194311027|gb|ACF45422.1| protein of unknown function DUF150 [Prosthecochloris aestuarii DSM
           271]
          Length = 179

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 12  EPRIFGDMGLAGDISSVIQPVIEEMSFR--SVQISLLEEKNLL-LQIFVERDDGNMTLRD 68
           E R+    G+   ++S  + V          V +++      + +++ V+  +  + +  
Sbjct: 3   EDRLI--SGIEACVASFSREVSTGKESEIFLVDLAVKAAGRSVKIEVLVDS-EQGIVISQ 59

Query: 69  CEELSQAISPILDVENIIEGHY----RLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLS 124
           C  LS+ I  +++ ++ ++  Y     L VSSPG+  P+     ++R  G +++      
Sbjct: 60  CAALSRRIRDMIESDDELQEVYGEVFELMVSSPGLGGPIRHVRQYIRHTGRLLSVRYRDD 119

Query: 125 SGDKQKLIGKIMGTS-----ETGFFLEKEKRGEKDMN---ELQIAISFDSLLSA 170
           +G    + G+++        E    LE  + G K        ++ +  D +  A
Sbjct: 120 AGSVHDVTGRLIEVDLAEGHEPFLVLEPVRSGRKKNGSLPPSRLKMMLDRIDKA 173


>gi|216263349|ref|ZP_03435344.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
 gi|215980193|gb|EEC21014.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
          Length = 145

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 64/151 (42%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++I+    +    +QI +   + ++ +    +L + I  +L +
Sbjct: 10  EVYNLIKNLTERLNVEILEINIFRNKNGGKIQIVLYSKNFSLGIDLMTDLHKMI--LLIL 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E  ++  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 68  EANLKYSFILELSTPGIDRKIKSDKEFQIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K      +  ++ + +  +  ARL+
Sbjct: 115 ILEAKSKSFIFKTDNKELNVFYSDVKKARLV 145


>gi|224534153|ref|ZP_03674733.1| conserved hypothetical protein [Borrelia spielmanii A14S]
 gi|224514578|gb|EEF84892.1| conserved hypothetical protein [Borrelia spielmanii A14S]
          Length = 145

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 63/151 (41%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++I+    +    +QI +   + ++ +    +L + I  +L +
Sbjct: 10  EVYNLIKNLTERLNVEILEINIFRNKNGGKIQIVLYSKNFSLGVDLMTDLHKMI--LLIL 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E   +  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 68  EANFKYSFTLELSTPGIDRRIKSDREFQIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K      +  ++ + +  +  ARL+
Sbjct: 115 ILKSKSKSFIFKTDSKELNVFYSDVKKARLV 145


>gi|323342030|ref|ZP_08082263.1| hypothetical protein HMPREF0357_10443 [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322464455|gb|EFY09648.1| hypothetical protein HMPREF0357_10443 [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 143

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 12/152 (7%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
                 I+P  E +    +   L+  + L L I   +D   + L  C +  +A    LD 
Sbjct: 2   EKYLEKIKPTAEALGLDIIDAELISNELLELSI-ARKDFKPVDLEICAKAGEAFGEALDY 60

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E        L+V S G +R +  + D+       V  +          + G ++   E  
Sbjct: 61  E------IGLDVGSAGAERVI-LEEDYDNVVDQYVLIKFKNPIQGADYVEGTVISVDENE 113

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
             +   ++        +IAI   ++   RL V
Sbjct: 114 VVVSYRQKTALK----KIAIERLNIKMLRLAV 141


>gi|225551682|ref|ZP_03772626.1| conserved hypothetical protein [Borrelia sp. SV1]
 gi|225371709|gb|EEH01135.1| conserved hypothetical protein [Borrelia sp. SV1]
          Length = 145

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 64/151 (42%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ +   ++   ++I+    + N  ++I +   + ++ +    +L + I  +L +
Sbjct: 10  EVFNLIKDLTGRLNVEILEINIFRNKNNGKIKIVLYSKNFSLDIDFLTDLHKII--LLIL 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E  ++  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 68  EANLKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K      +  ++ + +  +  ARL+
Sbjct: 115 ILESKPKSFIFKTDSKEVNVFYSDVKKARLV 145


>gi|260578922|ref|ZP_05846825.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
           43734]
 gi|258602896|gb|EEW16170.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
           43734]
          Length = 191

 Score = 51.2 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 22/158 (13%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN---MTLRDCEELSQAIS 77
              +   ++ ++ E       I + +      ++I V+  D       L   EELS+ +S
Sbjct: 8   KEQLEDSLRGLVNEFGLLIEGIKITKAGAKSAIRIAVDTADPRAERPDLDQLEELSREVS 67

Query: 78  PILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
             LD      E      Y LE+++PG+D P+V +  ++R  G +V   +           
Sbjct: 68  KHLDDAEASGEMSFGAGYTLELTTPGVDFPLVEQRHWVRNIGRLVR--LADGVE------ 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            +I         L    + +  +  ++    F  +  A
Sbjct: 120 -RIAQVEGEDVVLITPDKKQPSVRRVR----FADVAGA 152


>gi|111115634|ref|YP_710252.1| hypothetical protein BAPKO_0852 [Borrelia afzelii PKo]
 gi|122956310|sp|Q0SM52|RIMP_BORAP RecName: Full=Ribosome maturation factor rimP
 gi|110890908|gb|ABH02076.1| hypothetical protein BAPKO_0852 [Borrelia afzelii PKo]
          Length = 145

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 64/151 (42%), Gaps = 16/151 (10%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ + E ++   ++I+    +    +QI +   + ++ +    +L + I  +L +
Sbjct: 10  EVYNLIKNLTERLNVEILEINIFRNKNGGKIQIVLYSKNFSLGIDLMTDLHKMI--LLIL 67

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E  ++  + LE+S+PGIDR +    +F  + G  +   +                  E  
Sbjct: 68  EANLKYSFILELSTPGIDRRIKSDKEFQIFEGKKIKLMLDN-------------EFEEGF 114

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
               K K      +  ++ + +  +  ARL+
Sbjct: 115 ILEAKSKSFIFKTDSKELNVFYSDVKKARLV 145


>gi|332830403|gb|EGK03031.1| hypothetical protein HMPREF9455_01281 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 155

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 16/153 (10%)

Query: 25  ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84
           I  V    ++E     V +++     ++++      D ++ + DC  LS+ I   LD E 
Sbjct: 7   IKDVADKFLQETPMFLVDVTVRPGNIIVVE---IDSDDSIGIDDCIALSRDIESRLDRE- 62

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFF 144
                + LEV S G+  P      + +  G+ V           QKL G +  +   GF 
Sbjct: 63  --AEDFELEVGSAGVTSPFKIPRQYKKNEGNEVEVLTKAG----QKLSGVLKTSDNNGFV 116

Query: 145 LEK------EKRGEKDMNELQIAISFDSLLSAR 171
           +        E   +K   E  ++ ++D +   +
Sbjct: 117 ITITKMVKPEGAKKKTALEEDLSFAYDEVKYTK 149


>gi|194335548|ref|YP_002017342.1| protein of unknown function DUF150 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|259586174|sp|B4SCE5|RIMP_PELPB RecName: Full=Ribosome maturation factor rimP
 gi|194308025|gb|ACF42725.1| protein of unknown function DUF150 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 173

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 12/130 (9%)

Query: 21  LAGDISSVIQPVIEE------MSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
           +   I++ +  V+ E           + I +        ++I ++ DD  + +  C  +S
Sbjct: 1   MQERINNCVTQVLAESAGTRGEGAYLIDIKVKGKGSGRKIEILMDADD-GIRIHQCAYIS 59

Query: 74  QAISPILDVEN----IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           + +   ++ ++    ++  ++ L VSSPG+  P++    ++R  G ++      S+GD  
Sbjct: 60  RRVRERIEGDDDLLELVGENFDLMVSSPGLGEPIIIPRQYIRHVGKLLQVTYADSNGDPV 119

Query: 130 KLIGKIMGTS 139
           +L+G +   S
Sbjct: 120 ELVGHLQEVS 129


>gi|68536222|ref|YP_250927.1| hypothetical protein jk1145 [Corynebacterium jeikeium K411]
 gi|91208000|sp|Q4JV48|RIMP_CORJK RecName: Full=Ribosome maturation factor rimP
 gi|68263821|emb|CAI37309.1| conserved hypothetical protein [Corynebacterium jeikeium K411]
          Length = 191

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 22/158 (13%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGN---MTLRDCEELSQAIS 77
              +   ++ ++ E       I + +      ++I V+  D       L   EELS+ +S
Sbjct: 8   KEQLEDSLRGLVNEFGLLIEGIKITKAGAKSAIRIAVDTADPRAERPDLDQLEELSREVS 67

Query: 78  PILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLI 132
             LD      E      Y LE+++PG+D P+V +  ++R  G +V     +         
Sbjct: 68  KHLDDAEAAGEMSFGAGYTLELTTPGVDFPLVEQRHWVRNIGRLVRLAGGVE-------- 119

Query: 133 GKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
            +I         L    + +  +  ++    F  +  A
Sbjct: 120 -RIAQVEGEDVVLITPDKKQPSVRRVR----FADVAGA 152


>gi|224531664|ref|ZP_03672296.1| conserved hypothetical protein [Borrelia valaisiana VS116]
 gi|224511129|gb|EEF81535.1| conserved hypothetical protein [Borrelia valaisiana VS116]
          Length = 145

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 65/160 (40%), Gaps = 16/160 (10%)

Query: 15  IFGDMGLAGDISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELS 73
           +        ++ ++I+ + E  +   ++I+    + +  +QI +   + ++ +    +L 
Sbjct: 1   MIEHFDKNNEVYNLIKNLTERANIEILEINVFKNKNSGKIQIVLYSKNFSLGIDLLTDLH 60

Query: 74  QAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIG 133
           + I  +L +E  ++  + LE+S+PGI+R +    +F  + G  +   +            
Sbjct: 61  KMI--LLILEANLKYSFTLELSTPGINRKIKSDKEFQIFEGKKIKLMLDN---------- 108

Query: 134 KIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173
                 E      K K      +  ++ + +  +  ARL+
Sbjct: 109 ---EFEEGLILKSKSKSFIFKTDSKELNVFYSDVKKARLV 145


>gi|240146077|ref|ZP_04744678.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
 gi|257201822|gb|EEV00107.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
          Length = 76

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 94  VSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEK 153
           VSSPG+ RP+ ++ D++R  G  V      +   +++  G +    E    ++ E     
Sbjct: 1   VSSPGLGRPLKKEKDYIRSMGKEVEIRTYRAINREKEFYGILSAYDENTVTIKTED---- 56

Query: 154 DMNELQIAISFDSLLSARLIVT 175
                ++      +   RL   
Sbjct: 57  ---GTEMTFEKSDIALIRLAFD 75


>gi|289810679|ref|ZP_06541308.1| hypothetical protein Salmonellaentericaenterica_42532 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 63

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 8/68 (11%)

Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166
             + R+ G  VA  + ++  +++K  G I         +  E + E          +  +
Sbjct: 2   DHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEV--------FALSN 53

Query: 167 LLSARLIV 174
           +  A L+ 
Sbjct: 54  IQKANLVP 61


>gi|110597608|ref|ZP_01385893.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
 gi|110340728|gb|EAT59205.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
          Length = 173

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 65/168 (38%), Gaps = 15/168 (8%)

Query: 17  GDMGLAGDISSVIQPVI--EEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELS 73
               +   +  +I             V + +   ++   ++I V+ DD  + +  C  LS
Sbjct: 1   MQERIRSSVLQIIDGSAGTRGEGAYLVDLKVKGPQRARKIEILVD-DDSGVRIDQCAWLS 59

Query: 74  QA----ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQ 129
           +     +    ++  ++   + + VSSPG+  P++    ++R  G ++          ++
Sbjct: 60  RRLRELLESDEELLALVGEDFEITVSSPGLGEPLMLHRQYVRHCGKIMEVTYTDEDAVQR 119

Query: 130 KLIGKIMGTSETG-----FFLEKEKRGEKDMNE--LQIAISFDSLLSA 170
           +L G+++  S +        +  EK  +K       ++ +  D +  A
Sbjct: 120 ELKGRLLRVSLSEESRPHIVIMPEKNRKKGSTPNREEVTLYLDQVNRA 167


>gi|111225122|ref|YP_715916.1| hypothetical protein FRAAL5763 [Frankia alni ACN14a]
 gi|111152654|emb|CAJ64395.1| Hypothetical protein FRAAL5763 [Frankia alni ACN14a]
          Length = 197

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 12/118 (10%)

Query: 61  DGNMTLRDCEELSQAISPILDV-----ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGH 115
           DG + L    E S+ +S +LD      E +  G Y LEV+SPG+DRP+     + R  G 
Sbjct: 4   DGGIDLDAVAEASRVVSDLLDAAEAAGEGLSAGPYVLEVTSPGVDRPLTAPRHWRRAVGR 63

Query: 116 VVACEIVLSSGDKQKLIGKIMGTSETGFFLEK---EKRGEKDMNELQIAISFDSLLSA 170
           +V           + L G+++   E G  L       R  +        +++  +  A
Sbjct: 64  LVTVRDSAG----EVLSGRVLSADEAGADLAVATGPARRGRPQRRRVARVTYAQVERA 117


>gi|187918653|ref|YP_001884219.1| hypothetical protein BH0799 [Borrelia hermsii DAH]
 gi|226708085|sp|B2S1E3|RIMP_BORHD RecName: Full=Ribosome maturation factor rimP
 gi|119861501|gb|AAX17296.1| hypothetical cytosolic protein [Borrelia hermsii DAH]
          Length = 143

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 67/150 (44%), Gaps = 17/150 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ V + +    ++I+   +     +QI + + D       C +L + I  +L++
Sbjct: 9   EVYNLIKNVTDRLGIEIIEINTFRKRGEGRVQIVLYKGDDFGVDTLC-DLHKMI--LLNL 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E +++ ++ LE+S+PGI+R +    +F  + G  +   +           G I+      
Sbjct: 66  EAVLKYNFSLEISTPGINRKIKSDREFKIFEGKKIKLMLDNDFE-----EGFILKAGADS 120

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           F  + + +        ++ + +  +  A+L
Sbjct: 121 FIFKTDNK--------EVKVLYSDVKKAKL 142


>gi|172040526|ref|YP_001800241.1| hypothetical protein cur_0847 [Corynebacterium urealyticum DSM
           7109]
 gi|226708097|sp|B1VGB7|RIMP_CORU7 RecName: Full=Ribosome maturation factor rimP
 gi|171851830|emb|CAQ04806.1| conserved hypothetical protein [Corynebacterium urealyticum DSM
           7109]
          Length = 196

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 15/135 (11%)

Query: 17  GDMGLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQA 75
               L   + ++      +      +++         ++I V+ D+    L   EE SQ 
Sbjct: 1   MATPLDEKLRALAADEAMKCGLDVEKLTFTRAGAKSSVKIAVDADERP-DLDLLEEASQL 59

Query: 76  ISPILDVENIIEG-----HYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQK 130
           I    D     +       Y LEV++PG+D P+    +F R  G +         G    
Sbjct: 60  IGAAFDAAEEAQQIDLGPSYTLEVTTPGLDFPLREARNFQRNIGRLANL----PGGG--- 112

Query: 131 LIGKIMGTSETGFFL 145
             G+I         +
Sbjct: 113 -KGRIAAVENDEVAI 126


>gi|296125434|ref|YP_003632686.1| hypothetical protein Bmur_0384 [Brachyspira murdochii DSM 12563]
 gi|296017250|gb|ADG70487.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563]
          Length = 188

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 50/145 (34%), Gaps = 5/145 (3%)

Query: 29  IQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIE 87
           I+ ++E+     + + +     N  +   + +   +++   C E ++ I   +      E
Sbjct: 46  IKDILEKDGIYLLDLKVRAISDNKKVYAVIYKKKESVSHTHCIETTRKIQECIKQNGYDE 105

Query: 88  GHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEK 147
           G Y + VSS G          +  + G  +  +             ++    +    +  
Sbjct: 106 GDYTITVSSAGFRWKF--NDRYELFEGMPIKIKYRDGEQFITSY-AELKEAEDDYIIINV 162

Query: 148 EKRGEKDMNELQIAISFDSLLSARL 172
                  +NE  I I  + ++ ARL
Sbjct: 163 LDED-NIINEKNIKILKNDIIKARL 186


>gi|119953576|ref|YP_945786.1| hypothetical protein BT0799 [Borrelia turicatae 91E135]
 gi|254806615|sp|A1R0M4|RIMP_BORT9 RecName: Full=Ribosome maturation factor rimP
 gi|119862347|gb|AAX18115.1| hypothetical cytosolic protein [Borrelia turicatae 91E135]
          Length = 143

 Score = 47.7 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 68/150 (45%), Gaps = 17/150 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           ++ ++I+ V +++    ++I+   +     +QI + + +       C +L + I  +L +
Sbjct: 9   EVYNLIKNVTDQLGIEIIEINTFKKRDEGRIQIVLYKGNDFGVDTLC-DLHKMI--LLSL 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E +++ ++ LE+S+PGI+R +    +F  + G  +   +           G I+     G
Sbjct: 66  EVVLKYNFSLEISTPGINRKIKSDREFKIFEGRKIKLMLDNDFE-----EGLILKAEADG 120

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           F  + + +        +I I +  +  A+L
Sbjct: 121 FIFKTDTK--------EIRILYSDVKKAKL 142


>gi|300871261|ref|YP_003786134.1| hypothetical protein BP951000_1652 [Brachyspira pilosicoli 95/1000]
 gi|300688962|gb|ADK31633.1| hypothetical protein BP951000_1652 [Brachyspira pilosicoli 95/1000]
          Length = 182

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 55/152 (36%), Gaps = 9/152 (5%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLEEK-NLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              +    + +IE+ +   + + +L  K N  +   + +   +++   C E ++ I  ++
Sbjct: 37  QELLFENAKKLIEKHNIYLLDLKVLAVKDNKKVYAVIFKKKESVSHNHCIEATRVIQEVI 96

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
                 EG Y + VSS G         ++  +    +  +  +   +       +    +
Sbjct: 97  KNNGYDEGDYTITVSSAGFRWKF--DDNYELFEDMPIKIKYKVDDDNYITTTAILKEAKD 154

Query: 141 TGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               ++ +       + + I I   +++  RL
Sbjct: 155 DYIIIKNDD------DNIDIKILKSNIIKTRL 180


>gi|256384402|gb|ACU78972.1| conserved hypothetical protein [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256385234|gb|ACU79803.1| conserved hypothetical protein [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455490|gb|ADH21725.1| conserved hypothetical protein [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 164

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 56/157 (35%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQI----SLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
             L   I+ ++   +E ++ +  QI        +   +L     + +  +      + + 
Sbjct: 5   ESLKFQINELVNKELEVLNLKVYQINNLKEFENDMIQILVEDALQANKPLDFDILIKAND 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  +D        Y LE+SS GI++ +  + + L+     V  ++   +   ++  G 
Sbjct: 65  LVSNKIDQIIKTNQKYLLEISSSGIEKQIRNQEELLKALEQWVYVQLNNETKKVKEFEGY 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +   ++                +  + + FD +   R
Sbjct: 125 VTKYNDQTNTFTF--SFFIKGQKKNLDVKFDDIKFIR 159


>gi|300780962|ref|ZP_07090816.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
 gi|300532669|gb|EFK53730.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
          Length = 196

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 13/153 (8%)

Query: 23  GDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
            ++  +I+PV +        +  ++       +     D   TL   EE+S  +S + D 
Sbjct: 10  EELKELIRPVTDARGLDIEAVRTVKAGKKSQVVVALAADEAPTLDQLEEVSGELSELFDA 69

Query: 83  ENI-----IEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
                       Y LEV++PG+D P+ +   + R  G  V        G     +G +  
Sbjct: 70  AEAAGTVNFGAGYTLEVTTPGVDLPLTQPRHWRRNRGRRVKL------GGDIYRVGPLDD 123

Query: 138 TSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
             E    +      +K             +  A
Sbjct: 124 AEENVALIS--PAAKKSDEPGVRVAPISDVSGA 154


>gi|42560897|ref|NP_975348.1| hypothetical protein MSC_0353 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|331703355|ref|YP_004400042.1| hypothetical protein MLC_3350 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|51316641|sp|Q6MTP6|RIMP_MYCMS RecName: Full=Ribosome maturation factor rimP
 gi|42492394|emb|CAE76990.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|301320615|gb|ADK69258.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
 gi|328801910|emb|CBW54063.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 164

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 64/157 (40%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD---DGNMTLRDCEELSQ 74
             L   I+ ++   +E ++ +  QI+ L+E +N ++QI VE     +  +      + + 
Sbjct: 5   ESLKFQINELVNKELEVLNLKVYQINNLKEFENDMIQILVEDSLQANKPLDFDILIKAND 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  +D     +  Y LE+SS GI++ +  + + L+     V  ++       ++  G 
Sbjct: 65  LVSNKIDQLIKTKDKYLLEISSSGIEKQIRSQEELLKALEQWVYVQLNNEIKKVKEFEGY 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +   ++                +  + + FD +   R
Sbjct: 125 VTKYNDQTNTFTF--SFFIKGQKKNLDVKFDDIKFIR 159


>gi|83319689|ref|YP_424321.1| hypothetical protein MCAP_0337 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|91208351|sp|Q2SSE2|RIMP_MYCCT RecName: Full=Ribosome maturation factor rimP
 gi|83283575|gb|ABC01507.1| conserved hypothetical protein [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 164

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/157 (10%), Positives = 55/157 (35%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQI----SLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +   I+ ++   +E ++ +  +I        +   +L     + +  +      + + 
Sbjct: 5   ESIKFQINELVNKELEVLNLKVYEINNLKEFENDMIQILVEDALQANKPLDFDILIKAND 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  +D        Y LE+SS GI++ +  + + ++     V  ++       ++  G 
Sbjct: 65  LVSNKIDQIIKTNQKYLLEISSSGIEKQIRSQEELIKALDQWVYVQLNNEIKKVKEFEGY 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +   +                 +  + + ++++   R
Sbjct: 125 VTKYNNDTNTFSF--LFFIKGQKKTLEVMWNNIKFIR 159


>gi|213421301|ref|ZP_03354367.1| hypothetical protein Salmonentericaenterica_27659 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 58

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 8/64 (12%)

Query: 111 RWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSA 170
           R+ G  VA  + ++  +++K  G I         +  E + E          +  ++  A
Sbjct: 1   RFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEV--------FALSNIQKA 52

Query: 171 RLIV 174
            L+ 
Sbjct: 53  NLVP 56


>gi|313665235|ref|YP_004047106.1| hypothetical protein MSB_A0351 [Mycoplasma leachii PG50]
 gi|312949483|gb|ADR24079.1| conserved hypothetical protein [Mycoplasma leachii PG50]
          Length = 164

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/157 (10%), Positives = 54/157 (34%), Gaps = 6/157 (3%)

Query: 19  MGLAGDISSVIQPVIEEMSFRSVQI----SLLEEKNLLLQIFVERDDGNMTLRDCEELSQ 74
             +   I+ ++   +E ++ +  +I        +   +L     + +  +      + + 
Sbjct: 5   ESIKFQINELVNKELEVLNLKVYEINNLKEFENDMIQILVEDALQANKPLDFDILIKAND 64

Query: 75  AISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGK 134
            +S  +D        Y LE+SS GI++ +  + + ++     V  ++       ++  G 
Sbjct: 65  LVSNKIDQIIKTNQKYLLEISSSGIEKQIRSQEELIKALDQWVYVQLNNEIKKVKEFEGY 124

Query: 135 IMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171
           +   +                 +  + + + ++   R
Sbjct: 125 LTKYNNDTDTFSF--LFFIKGQKKTLDVMWKNIKFIR 159


>gi|4455675|emb|CAB36567.1| hypothetical protein MLCB596.11 [Mycobacterium leprae]
          Length = 122

 Score = 44.6 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 55  IFVERDDGNMTLRDC-EELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN 113
           I V  D   +  RD    LS ++S +LD  + I   Y LEVSS G+ RP   +  F R  
Sbjct: 12  ITVLADGDTVLARDIIATLSHSVSALLDGLDNIVDRYFLEVSSLGMGRPFTSEKHFRRAR 71

Query: 114 GHVVAC 119
           G  V  
Sbjct: 72  GRKVEL 77


>gi|15639878|ref|NP_219328.1| hypothetical protein TP0893 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026116|ref|YP_001933888.1| hypothetical protein TPASS_0893 [Treponema pallidum subsp. pallidum
           SS14]
 gi|51316577|sp|O83863|RIMP_TREPA RecName: Full=Ribosome maturation factor rimP
 gi|3323211|gb|AAC65850.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018691|gb|ACD71309.1| hypothetical protein TPASS_0893 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291060252|gb|ADD72987.1| hypothetcal protein [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 156

 Score = 43.1 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 27/153 (17%)

Query: 30  QPVIEEMSFRSVQISLL----------EEKNLLLQIFVERDDGNMTLRDCEELSQAISPI 79
             V+  +    V +              +      I+     G +TL  C  + + + P 
Sbjct: 15  AEVVRSLGCALVDLQWSVSAVSRRVQQAQGRARAVIY---SAGGVTLDVCARVHRILVPR 71

Query: 80  LDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTS 139
           L           LEV SPG +R +   ++F  + G  V              +G +    
Sbjct: 72  LQALG-GVRTVFLEVGSPG-ERVIRNAAEFSIFLGETVKVWFCTGQF----QVGTLAFAD 125

Query: 140 ETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
           ET   L            + + I +  L  A+L
Sbjct: 126 ETCLTLT--------AGGVPVTIPYVQLTKAQL 150


>gi|81428863|ref|YP_395863.1| hypothetical protein LSA1252 [Lactobacillus sakei subsp. sakei 23K]
 gi|78610505|emb|CAI55556.1| Hypotehtical protein [Lactobacillus sakei subsp. sakei 23K]
          Length = 70

 Score = 43.1 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 9/71 (12%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 103 MVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAI 162
           M +++DF    G  +   +  +   ++   G +    +    L      +    + ++  
Sbjct: 1   MKKEADFQNALGEYIHISLYQAVDGEKIYQGILKALDQETLTLAI----KIKTRQKEVTF 56

Query: 163 SFDSLLSARLI 173
           +   +  ARL 
Sbjct: 57  NRKEIAKARLA 67


>gi|126654114|ref|ZP_01725932.1| hypothetical protein BB14905_22743 [Bacillus sp. B14905]
 gi|126589394|gb|EAZ83544.1| hypothetical protein BB14905_22743 [Bacillus sp. B14905]
          Length = 44

 Score = 43.1 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 19 MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERD 60
            +   I  + +P+++E++   V I  ++E     L+++V+  
Sbjct: 2  SKVPSLIEELAKPIVDELNLELVDIEFVKEGRNWFLRVYVDTP 44


>gi|303283206|ref|XP_003060894.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457245|gb|EEH54544.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 332

 Score = 42.3 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 20/154 (12%)

Query: 38  FRSVQISLLEEKNL-LLQIFVERDDGN-MTLRDCEELSQAISPILDVENIIEGHYRLEVS 95
                  +  E+      +   +D     TL    E+S+  + +L+ EN       LEV+
Sbjct: 176 LEIYSFKVSVERRRVYASVDAVKDKFGSPTLDQLGEVSRKFNALLEEEN-FPEDVALEVA 234

Query: 96  SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKL-----------------IGKIMGT 138
           SPG +R +    D  R+    +      ++ D                       K+   
Sbjct: 235 SPGAERALRLPDDLPRFRNLTMKVTYAAAAEDDGAEGTRTRVMDVVDVDGDAVEFKLADV 294

Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARL 172
            E     +K +   K   E ++ I    +  A L
Sbjct: 295 PENRPQAKKGQGMNKKQREWRLKIPIADVAKANL 328


>gi|203284695|ref|YP_002222435.1| hypothetical protein BDU_807 [Borrelia duttonii Ly]
 gi|259585730|sp|B5RMZ3|RIMP_BORDL RecName: Full=Ribosome maturation factor rimP
 gi|201084138|gb|ACH93729.1| uncharacterized conserved protein [Borrelia duttonii Ly]
          Length = 143

 Score = 41.9 bits (97), Expect = 0.048,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 58/150 (38%), Gaps = 17/150 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I  +I+ V   +    ++I+         +QI + + D       C +L + I  +L +
Sbjct: 9   EIYDLIKDVTYLLGISIIEINTFRRRDEFKIQIVLYKSDNFSVDMLC-DLHKMI--LLKL 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E +++ +  LE+S+PGI+R +    +F  + G  +   +                  E  
Sbjct: 66  EAVLKYNVSLEISTPGINRKIKSDREFKIFEGKKIKLML-------------NNDFEEGF 112

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +           ++ I + ++  A+L
Sbjct: 113 ILRAERDGFIFKTEYKEVKILYSNVKKAKL 142


>gi|203288227|ref|YP_002223242.1| hypothetical protein BRE_810 [Borrelia recurrentis A1]
 gi|259585731|sp|B5RQD7|RIMP_BORRA RecName: Full=Ribosome maturation factor rimP
 gi|201085447|gb|ACH95021.1| uncharacterized conserved protein [Borrelia recurrentis A1]
          Length = 143

 Score = 41.5 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 17/150 (11%)

Query: 24  DISSVIQPVIEEMSFRSVQIS-LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV 82
           +I  +I+ V   +    ++I+   +     +QI + + D       C +L + I  +L +
Sbjct: 9   EIYDLIKDVTYLLGISIIEINTFRKRDEFKIQIVLYKSDNFSVDMLC-DLHKMI--LLKL 65

Query: 83  ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142
           E +++ +  LE+S+PGI+R +    +F  + G  +   +                  E  
Sbjct: 66  EAVLKYNVSLEISTPGINRKIKSDREFKIFEGKKIKLML-------------NNDFEEGF 112

Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172
               +           ++ I + ++  A+L
Sbjct: 113 ILRAERDGFIFKTEYKKVKILYSNVKKAKL 142


>gi|313678839|ref|YP_004056579.1| hypothetical protein MBOVPG45_0800 [Mycoplasma bovis PG45]
 gi|312950794|gb|ADR25389.1| conserved hypothetical protein [Mycoplasma bovis PG45]
          Length = 148

 Score = 41.1 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 8/140 (5%)

Query: 32  VIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYR 91
           ++ +       + LL+E  LL+   +E    +  L+  EEL++ I+  +D  ++      
Sbjct: 7   LVNKFGNTIADVKLLKEDGLLI---LEVTASSTDLKAIEELTKLINEYIDSLDVELDFDS 63

Query: 92  LEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRG 151
           L VSSPG         +     G ++  ++  +        G+++   +    L+   +G
Sbjct: 64  LSVSSPGFKLD-YETDELGNHIGEIIDVKLNQNVNKLDSYTGELLEDDDESILLKWNCKG 122

Query: 152 EKDMNELQIAISFDSLLSAR 171
           +      ++ I   ++  AR
Sbjct: 123 QF----RKVRIEKSNIKKAR 138


>gi|152965408|ref|YP_001361192.1| hypothetical protein Krad_1440 [Kineococcus radiotolerans SRS30216]
 gi|189038696|sp|A6W7Y9|RIMP_KINRD RecName: Full=Ribosome maturation factor rimP
 gi|151359925|gb|ABS02928.1| protein of unknown function DUF150 [Kineococcus radiotolerans
           SRS30216]
          Length = 208

 Score = 41.1 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 85  IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGF- 143
           + E  Y LEVSSPG+DRP+     + R  G +V   +   +     L+ +++   E G  
Sbjct: 78  LGEAPYTLEVSSPGVDRPLTTPRHWSRARGRLVRAVLTDGTA----LLVRVVSVDEAGVH 133

Query: 144 -FLEKEKRGEKDMNELQIAISFD 165
             LE +    K      +    D
Sbjct: 134 GTLEPQMVKGKPPRAKDVGAPRD 156


>gi|149412623|ref|XP_001510424.1| PREDICTED: similar to platelet-derived growth factor receptor beta
           [Ornithorhynchus anatinus]
          Length = 1325

 Score = 38.1 bits (87), Expect = 0.65,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 1/100 (1%)

Query: 38  FRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSP 97
              V++ + E     L+ F + D    +      +   +   L   +   G   L   S 
Sbjct: 617 LTLVRVKVNEGGRYTLRAFHDDDVQEFSFHLQINVPAKVVE-LTESHPSSGEQILTCRSQ 675

Query: 98  GIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMG 137
           G+ +P V       +   ++         ++ + +    G
Sbjct: 676 GMPQPQVTWFTCSDFKRTILRVVDEGPIQEEHQHVDIRSG 715


>gi|225619364|ref|YP_002720590.1| hypothetical protein BHWA1_00421 [Brachyspira hyodysenteriae WA1]
 gi|225214183|gb|ACN82917.1| hypothetical protein BHWA1_00421 [Brachyspira hyodysenteriae WA1]
          Length = 189

 Score = 37.7 bits (86), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/131 (11%), Positives = 41/131 (31%), Gaps = 4/131 (3%)

Query: 22  AGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80
              + + I+ V+EE +   + + +     N  +   + +   +++   C E ++ I   +
Sbjct: 40  EALLFNGIKDVLEENNIYLLDLKVRAISDNKKVYAVIFKKKESVSHTHCIETTRKIQDCI 99

Query: 81  DVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSE 140
                 EG Y + VSS G          +  +    +  +              +  + +
Sbjct: 100 KSNGYDEGDYTITVSSAGFRWKF--NDRYELFEDMPIKIKYRSGEEFI-TAYAMLKKSED 156

Query: 141 TGFFLEKEKRG 151
               +      
Sbjct: 157 DYIIITVTDED 167


>gi|213022853|ref|ZP_03337300.1| hypothetical protein Salmonelentericaenterica_09628 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 41

 Score = 37.7 bits (86), Expect = 0.85,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 15/47 (31%), Gaps = 8/47 (17%)

Query: 128 KQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174
           ++K  G I         +  E + E          +  ++  A L+ 
Sbjct: 1   RRKWQGIIKAVDGEMITVTVEGKDEV--------FALSNIQKANLVP 39


>gi|157121197|ref|XP_001659871.1| hypothetical protein AaeL_AAEL009269 [Aedes aegypti]
 gi|108874656|gb|EAT38881.1| conserved hypothetical protein [Aedes aegypti]
          Length = 1310

 Score = 36.5 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/131 (10%), Positives = 45/131 (34%), Gaps = 2/131 (1%)

Query: 45  LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMV 104
           L  ++   L I+     G        ++SQ I   L   +++  +  L   S  +   + 
Sbjct: 450 LTSKRRKPLVIY--GKTGAGKSVLVAKISQNIHTWLPDSHLVLRYTNLTAMSSDVTSLLG 507

Query: 105 RKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISF 164
             ++ +      V      +       + +++ +++    +  +        +    +  
Sbjct: 508 SITEQISVLVKNVPTRCHHTIESYSDALKQLIESTKQQITILIDSVDSLRDLDELDWLPL 567

Query: 165 DSLLSARLIVT 175
           + L + +L++T
Sbjct: 568 ELLENVKLVLT 578


>gi|255078408|ref|XP_002502784.1| predicted protein [Micromonas sp. RCC299]
 gi|226518050|gb|ACO64042.1| predicted protein [Micromonas sp. RCC299]
          Length = 298

 Score = 36.5 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 41/156 (26%), Gaps = 19/156 (12%)

Query: 38  FRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSS 96
                  +  E K + + I    D       D           +  E        LEV+S
Sbjct: 141 LEIFSYKVSAERKRIYISIDAVNDKFGSPTLDQLGAVSRTYNTVLEEKGFPDDVALEVAS 200

Query: 97  PGIDRPMVRKSDFLRWNGHVVACEI-----VLSSGDKQKLIGKIMGTSET---GFFLEKE 148
           PG +R +    +  R+    +            +   +  +  +    E     F L   
Sbjct: 201 PGAERQLRLPLELERFRDLTMKVTYAARAEEDGAEGTRTKVLDVEDIDEDGSPTFKLADV 260

Query: 149 KRGE----------KDMNELQIAISFDSLLSARLIV 174
           +             K   + ++ +    +  A L V
Sbjct: 261 EENRPQAKKGQGMNKKQRDWRLKLDVGDISKANLYV 296


>gi|328709917|ref|XP_003244104.1| PREDICTED: hypothetical protein LOC100571273 [Acyrthosiphon pisum]
          Length = 618

 Score = 36.1 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 11/139 (7%)

Query: 50  NLLLQIFVERDDGNMTLRDCE-ELSQAISPILDVENIIEGHYR-LEVSSPG----IDRPM 103
              +++  +RDD  +    C  +++ A+     + +        LE  S      +D  +
Sbjct: 481 RWTVRLMCDRDDATIQCLTCALDVADAVPSAWSLLDPFASFAELLECVSYEPDVLLDYLI 540

Query: 104 VRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAIS 163
             +S+FL +   ++      +   +        G  +    L    R +           
Sbjct: 541 SEESNFLPYALRILKTACRDA---RCFFKSCGSGLDDAMVLL-IRLRLKMLRLHENHVFP 596

Query: 164 FDSLLSARLIVT-DELLRA 181
           ++ +  A+LI   DEL   
Sbjct: 597 YNVVPIAKLIQRCDELYTE 615


>gi|53793952|ref|YP_112405.1| DNA primase [uncultured bacterium]
 gi|114881172|ref|YP_758713.1| TraC DNA primase and ssDNA binding protein [Pseudomonas aeruginosa]
 gi|168998426|ref|YP_001687703.1| DNA primase TraC1 [Birmingham IncP-alpha plasmid]
 gi|136172|sp|P27189|TRAC4_ECOLX RecName: Full=DNA primase traC; AltName: Full=Replication primase
 gi|42791|emb|CAA42455.1| traC-1 [Escherichia coli]
 gi|53136988|emb|CAG30896.1| DNA primase [uncultured bacterium]
 gi|53794381|gb|AAU93732.1| TraC1 [Integration vector pJK202]
 gi|114703583|emb|CAK12725.1| TraC DNA primase and ssDNA binding protein [Pseudomonas aeruginosa]
 gi|157277527|tpe|CAJ85719.1| TPA: TraC DNA primase and ssDNA binding protein [Birmingham
           IncP-alpha plasmid]
 gi|262117783|dbj|BAI47875.1| TraC1 [Helper vector pRH210]
 gi|262117827|dbj|BAI47918.1| TraC1 [Helper vector pRH220]
 gi|317109811|gb|ADU90750.1| TraC DNA primase; long form [uncultured bacterium]
 gi|317109897|gb|ADU90835.1| DNA primase TraC1 [uncultured bacterium]
 gi|317109980|gb|ADU90917.1| DNA primase traC Replication primase [uncultured bacterium]
          Length = 1061

 Score = 36.1 bits (82), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 40/130 (30%), Gaps = 9/130 (6%)

Query: 70  EELSQAISPILDVENIIEGHYRLEVSSPGIDRPM---VRKSDFLRWNGHVVACEIVLSSG 126
             L + ++     E   +   R E++S  +   +           + G  +         
Sbjct: 217 SRLDRDLAHPFGSEGYAKEELRAEIASMILGDELGIGHDPGQHAAYVGSWIKALQEDPLE 276

Query: 127 ------DKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLR 180
                 D +K+   ++   +     +  ++  +      +    D +    +   DEL+ 
Sbjct: 277 IFRAAADAEKIQDFVLAFEQKQIQEQTTQQAIEPAQGATMEQQQDQVARPAIAPADELIA 336

Query: 181 ASLNNYGSYA 190
            +L  Y + A
Sbjct: 337 QTLRMYRAGA 346


>gi|255026352|ref|ZP_05298338.1| hypothetical protein LmonocytFSL_08425 [Listeria monocytogenes
          FSL J2-003]
          Length = 41

 Score = 35.7 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 19 MGLAGDISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFV 57
            +   + +++ P+ +E+    V I+  +E     L+IF+
Sbjct: 2  SKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFI 41


>gi|205373422|ref|ZP_03226226.1| hypothetical protein Bcoam_09035 [Bacillus coahuilensis m4-4]
          Length = 58

 Score = 35.7 bits (81), Expect = 3.4,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 17/39 (43%)

Query: 19 MGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFV 57
            +   +  +  P+++E+    V +  ++E +    + +
Sbjct: 2  SKITDLVEQLAPPILDELKLELVDVEYVKEGSNWFYVCI 40


>gi|329937165|ref|ZP_08286764.1| ATP-dependent RNA helicase [Streptomyces griseoaurantiacus M045]
 gi|329303446|gb|EGG47332.1| ATP-dependent RNA helicase [Streptomyces griseoaurantiacus M045]
          Length = 506

 Score = 35.4 bits (80), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 24/164 (14%)

Query: 10  KYEPR------IFGDMGLAGDISSVIQPVIEEMSFRS---VQISLLEEKNLLLQ----IF 56
           + EPR      +     LA  +++ + P  + +  R    V    L  +   L+    + 
Sbjct: 134 RAEPRYPLALVLVPTRELAQQVTAALTPYAKALGLRLTTVVGGVSLGRQASALRGGAEVV 193

Query: 57  VERD---DGNMTLRDCEELSQAISPILDVENIIEGHYRL--EVSSPGIDRP----MVRKS 107
           V         +   DC   S A++ +LD  + +     +    +     RP    ++  +
Sbjct: 194 VATPGRLKDLIDRDDCRLDSVALT-VLDEADQMTDMGFMPQVTALLDRTRPDGQRLLFSA 252

Query: 108 DFLRWNGHVVACEIVLS-SGDKQKLIGKIMGTSETGFFLEKEKR 150
              R    +V   +            G +         ++ E +
Sbjct: 253 TLDRNVDRLVRRYLHDPVVHSVDPAAGAVTTMEHHVLHVDDEDK 296


>gi|170028504|ref|XP_001842135.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876257|gb|EDS39640.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1337

 Score = 35.0 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/131 (11%), Positives = 44/131 (33%), Gaps = 2/131 (1%)

Query: 45  LLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMV 104
           L  ++   L I+     G        ++S  +   L    ++  +  L   S  +   + 
Sbjct: 472 LTSKRRKPLVIY--GKTGAGKSALVAKISHNVHTWLPESQLVLRYANLTTLSSDVTSLLG 529

Query: 105 RKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISF 164
             ++ L      V      +     + + +++ +S+    +  +        +    +  
Sbjct: 530 SITEQLSVLVKGVPTRCNHTIESYSEALLELIESSKQQVTILIDSVDSLRDLDDLGWLPL 589

Query: 165 DSLLSARLIVT 175
           + L + +LI+T
Sbjct: 590 ELLDNVKLILT 600


>gi|145256871|ref|XP_001401544.1| hypothetical protein ANI_1_1624184 [Aspergillus niger CBS 513.88]
 gi|134058453|emb|CAK47940.1| hypothetical protein An04g01760 [Aspergillus niger]
          Length = 771

 Score = 35.0 bits (79), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 2/85 (2%)

Query: 2   ESTHFLHSKYEPRIFGDMGLAGDISSVIQ--PVIEEMSFRSVQISLLEEKNLLLQIFVER 59
           + +H       PRI  D  ++     + Q  P ++        +      N  L+   + 
Sbjct: 133 QVSHTRDHPSNPRILEDAAVSPLRREMAQGMPYVQAHGQDLEDLESAPCANPTLREESQS 192

Query: 60  DDGNMTLRDCEELSQAISPILDVEN 84
              + +   C   S  +S I    +
Sbjct: 193 ALRSKSQASCMTQSSQVSSIFRGTD 217


>gi|332027366|gb|EGI67449.1| Bardet-Biedl syndrome 4 protein-like protein [Acromyrmex
           echinatior]
          Length = 398

 Score = 34.6 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 99  IDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNEL 158
           I + ++      R        E +    D +   G+             E +     +  
Sbjct: 108 IAKSLLIMGSHKRAIDAYAEAEKISILPDWEIYHGREAYVKLNQLQ---EGKKYFKRSTE 164

Query: 159 QIAISFDSLLSARLIVTDELLRASLNNYGSY 189
              I   ++  ARL + D+++  + N Y + 
Sbjct: 165 LTKIELPNIDLARLYLLDDMIPEARNAYTAA 195


>gi|332520307|ref|ZP_08396769.1| Glutathione synthase [Lacinutrix algicola 5H-3-7-4]
 gi|332043660|gb|EGI79855.1| Glutathione synthase [Lacinutrix algicola 5H-3-7-4]
          Length = 346

 Score = 34.6 bits (78), Expect = 8.0,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 7   LHSKYEPRIFGDMGLAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIF------VERD 60
           +H+   P           ++ +++P + +     V I ++ +K + + +F      V  D
Sbjct: 251 IHAGGRPETVKMTEKIKKLAEIVKPKLVQDGMFLVGIDIVGDKLMEINVFSPGGLNVTGD 310

Query: 61  DGNMTLRDCEELSQAISPILDVENIIEGH 89
             +     C  + +AI   +   ++  G+
Sbjct: 311 MYDADF--CTPVIKAIEKKVYFRDMYSGY 337


>gi|167760011|ref|ZP_02432138.1| hypothetical protein CLOSCI_02383 [Clostridium scindens ATCC 35704]
 gi|167662304|gb|EDS06434.1| hypothetical protein CLOSCI_02383 [Clostridium scindens ATCC 35704]
          Length = 947

 Score = 34.2 bits (77), Expect = 9.7,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 32/103 (31%), Gaps = 17/103 (16%)

Query: 13  PRIFGDMGLAGDISSVIQPVIE-EMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEE 71
            R+    G+   ++  I+ V+        V +  +  + +         D  +++ + E 
Sbjct: 212 DRLVVKEGIEQRLTDSIEDVLALAEGLLIVDV--IGGEPINFSQSFACPDCGISIDEIEP 269

Query: 72  LSQAISPIL--------------DVENIIEGHYRLEVSSPGID 100
            S + +                   E++I     L +S   I 
Sbjct: 270 RSFSFNNPFGACPECFGLGYKMEFDEDLIIPDKNLSISEGAIT 312


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.310    0.140    0.345 

Lambda     K      H
   0.267   0.0426    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,271,063,974
Number of Sequences: 14124377
Number of extensions: 36457730
Number of successful extensions: 156256
Number of sequences better than 10.0: 1870
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 151794
Number of HSP's gapped (non-prelim): 1895
length of query: 192
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 61
effective length of database: 2,992,500,243
effective search space: 182542514823
effective search space used: 182542514823
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 77 (34.2 bits)