RPSBLAST alignment for GI: 254780789 and conserved domain: cd01734

>gnl|CDD|99771 cd01734, YlxS_C, YxlS is a Bacillus subtilis gene of unknown function with two domains that each have an alpha/beta fold. The N-terminal domain is composed of two alpha-helices and a three-stranded beta-sheet, while the C-terminal domain is composed of one alpha-helix and a five-stranded beta-sheet. This CD represents the C-terminal domain which has a fold similar to the Sm fold of proteins like Sm-D3.. Length = 83

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 90  YRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLE-KE 148
           Y LEVSSPG +RP+ +++DF R  G  V  ++      +++  G ++G  +    LE   
Sbjct: 1   YFLEVSSPGAERPLKKEADFERAVGKYVHVKLYQPIDGQKEFEGTLLGVDDDTVTLEVDI 60

Query: 149 KRGEKDMNELQIAISFDSLLSARLIVT 175
           K   K      + I  D +  ARL   
Sbjct: 61  KTRGKT-----VEIPLDKIAKARLAPE 82