HHsearch alignment for GI: 254780790 and conserved domain: COG2246

>COG2246 Predicted membrane protein [Function unknown].
Probab=99.91  E-value=9.9e-24  Score=139.70  Aligned_cols=123  Identities=19%  Similarity=0.256  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH----HHHHHHHHH
Q ss_conf             789999999999999999999999995-711389999999999999999988672057880679999----999999999
Q gi|254780790|r    2 KQCIIFIINIVVVFFIDVMGFFILMKC-GADPFYSRIFSIAVAFLVTWIPSRLFIFLKLRRKSFLET----VRYGVMYFM   76 (129)
Q Consensus         2 rql~rF~ivG~~~~~vd~~i~~ll~~~-g~~~~~A~~ia~~~a~~~nf~lnr~~tF~~~~~~~~~~~----~~~~~~~~~   76 (129)
T Consensus        11 ~~~lrF~~VG~~~t~V~~~~~~ll~~~~~~~~~~A~~~a~~~~ii~sf~~N~~wTF~~~~~~~~~~~~~~~~~~~~~~~l   90 (139)
T COG2246          11 SRLLRFAIVGGLGTLVDFAVLWLLVKALGVPYALANAIAYEAAIIFSFVLNRRWTFRDRSTSRLHEFLRRLVKFNVAVLL   90 (139)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999964342999999999999998145658899999999999999999741267527887699999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999621230089999999999999999997679986767
Q gi|254780790|r   77 LSILNYAFYVKLLLTFQGLQPLLATVLSAVSSMLFVFLLYIRFMTRRVY  125 (129)
Q Consensus        77 ~~~~~~~l~~~l~~~~~~~~~~~a~~i~~~~~~~~nf~~~k~~vFrk~~  125 (129)
T Consensus        91 g~~~~~~~~~~l~~~~~~~~~~~a~~i~~~~~~i~nfi~s~~-v~~~~~  138 (139)
T COG2246          91 GLAVLLLVLYILTLGLLLVAYLIANLIGIVAAFIINFLLSKR-VFWRVR  138 (139)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-EEEECC
T ss_conf             999999999999875100899999999999999999998872-464167