RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780790|ref|YP_003065203.1| hypothetical protein CLIBASIA_03405 [Candidatus Liberibacter asiaticus str. psy62] (129 letters) >d1wlga_ b.152.1.1 (A:) Flagellar hook protein flgE {Salmonella typhimurium [TaxId: 90371]} Length = 293 Score = 24.5 bits (52), Expect = 3.0 Identities = 8/16 (50%), Positives = 9/16 (56%) Query: 21 GFFILMKCGADPFYSR 36 GFF L+ FYSR Sbjct: 10 GFFRLVDSNGSVFYSR 25 >d1mxaa3 d.130.1.1 (A:232-383) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]} Length = 152 Score = 22.9 bits (49), Expect = 8.3 Identities = 10/41 (24%), Positives = 14/41 (34%) Query: 31 DPFYSRIFSIAVAFLVTWIPSRLFIFLKLRRKSFLETVRYG 71 + S ++ V P L L L + ET YG Sbjct: 87 EKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYG 127 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.345 0.153 0.464 Gapped Lambda K H 0.267 0.0522 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 483,793 Number of extensions: 19715 Number of successful extensions: 74 Number of sequences better than 10.0: 1 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 11 Length of query: 129 Length of database: 2,407,596 Length adjustment: 76 Effective length of query: 53 Effective length of database: 1,364,116 Effective search space: 72298148 Effective search space used: 72298148 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 38 (21.6 bits) S2: 48 (22.7 bits)