HHsearch alignment for GI: 254780791 and conserved domain: PRK00286

>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed.
Probab=100.00  E-value=0  Score=1023.07  Aligned_cols=438  Identities=40%  Similarity=0.669  Sum_probs=416.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE
Q ss_conf             89862299999999999740017189999970543568886279998748947999997352105866814598899999
Q gi|254780791|r   11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG   90 (529)
Q Consensus        11 ~~~~~svs~l~~~i~~~l~~~~~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g   90 (529)
T Consensus         2 ~~~~lsVsel~~~ik~~le~~~~~v~V~GEIS~~~-~~~sGH~YF~LkD~~a~i~~v~~~~~~~~l~~~~~~G~~V~v~g   80 (443)
T PRK00286          2 MDNPLSVSELNGYVKSLLERDLGQVWVRGEISNFT-RPSSGHWYFTLKDEQAQIRCVMFRGSARRLKFKPEEGMQVLVRG   80 (443)
T ss_pred             CCCCEEHHHHHHHHHHHHHHHCCCEEEEEEECCCE-ECCCCEEEEEEEECCCEEEEEEECCHHHHCCCCCCCCCEEEEEE
T ss_conf             99863099999999999983489899999964666-28996499999818928999999284752899998999999999


Q ss_pred             EEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf             96675288437999997101680079999999999765401226100163102652899984784258999999863059
Q gi|254780791|r   91 KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF  170 (529)
Q Consensus        91 ~~~~y~~~g~~ql~v~~i~~~g~G~l~~~~e~lk~~L~~eGlfd~~~k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~  170 (529)
T Consensus        81 ~i~~Y~~~g~~ql~v~~i~~~g~G~L~~~~e~lk~kL~~eGlFd~~~Kk~lP~~P~~IgvITS~tgAa~~Di~~~~~~R~  160 (443)
T PRK00286         81 KVSVYEPRGDYQLIVEDIEPAGIGALAQAFEQLKEKLAAEGLFDPERKKPLPFFPKRIGVITSPTGAAIRDILTVLSRRF  160 (443)
T ss_pred             EEEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
T ss_conf             99898688618999978127792189999999999997777968777899987855799983684389999999985049


Q ss_pred             C-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECC
Q ss_conf             7-589997210011110367999999997410035767775899951688844422007699999997489048852057
Q gi|254780791|r  171 P-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH  249 (529)
Q Consensus       171 p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGH  249 (529)
T Consensus       161 p~~~i~l~p~~VQG~~A~~~I~~ai~~~~~~~------~~DvIIi~RGGGS~eDL~~FNdE~varaI~~s~iPVISaIGH  234 (443)
T PRK00286        161 PSVEVIIYPTLVQGEGAAASIVEAIERANARG------EVDVLIVARGGGSLEDLWAFNDEAVARAIAASKIPVISAVGH  234 (443)
T ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHC------CCCEEEEECCCCCHHHHHHCCCHHHHHHHHHCCCCEEECCCC
T ss_conf             96599998145626547999999999985224------888899936878888976518799999998489978951466


Q ss_pred             CCCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHH
Q ss_conf             775258988641237772145676332346777669999988877899888999985567765304--978898678887
Q gi|254780791|r  250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYR  327 (529)
Q Consensus       250 E~D~Tl~D~VAD~Ra~TPTaAAElavp~~~EL~~~L~~l~~RL~~a~~~~l~~~~q~L~~l~r~L~--~~~~~L~~~~Qr  327 (529)
T Consensus       235 E~D~Ti~D~VAD~Ra~TPTaAAe~~~p~~~e~~~~l~~~~~~l~~~~~~~l~~~~~~L~~l~~~l~~~~p~~~l~~~~~~  314 (443)
T PRK00286        235 ETDFTIADFVADLRAPTPTAAAELVVPDQAELLQRLQQLRQRLARALRRYLKQKEQRLDQLAHRLKFQSPQRRLDQQQQR  314 (443)
T ss_pred             CCCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             77755888865403799699999865319999999999999999999999999999999999654236999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88865456899999987568899999841011346889999999999999999988765556788887767777788750
Q gi|254780791|r  328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE  407 (529)
Q Consensus       328 Ld~~~~rL~~~l~~~l~~~~~~l~~~~~rL~~~~~~~~l~~~r~~L~~~q~~L~q~~~~~l~~~~~~~~~~~~~l~~l~~  407 (529)
T Consensus       315 l~~~~~~L~~~~~~~l~~~~~~l~~l~~~L~~------------------------------------------------  346 (443)
T PRK00286        315 LDELRQRLRRALRRQLRQARQRLERLSQRLQN------------------------------------------------  346 (443)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------------------------------------------
T ss_conf             99999999999999999999999999987538------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCEECCHHHCCCCCEEEE
Q ss_conf             26889999999999999999999999999999999999998871696777314619998489889577789299986999
Q gi|254780791|r  408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI  487 (529)
Q Consensus       408 ~~~~~l~~~~~~l~~l~~rL~~~~~~~L~~~~~rL~~l~~~L~slsP~~~L~RGYaiv~~~~GkiI~s~~~l~~gd~i~i  487 (529)
T Consensus       347 -~~~~i~~~~~~l~~~~~~l~~~~~~~l~~~~~~l~~~~~~L~~lsP~~~L~RGYaiv~~~~gkiI~s~~~l~~gd~i~i  425 (443)
T PRK00286        347 -PQPRIARAQQRLEQLANRLLQAMQRRLKRKRQRLEALAQQLEALSPLATLARGYAIVRDEDGKVIRSAKQLKPGDRLTI  425 (443)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCEECCHHHCCCCCEEEE
T ss_conf             -6778999999999999999999999999999999999999995895788749559999299999748899799898999


Q ss_pred             EEECEEEEEEEEECCCC
Q ss_conf             99110999999505788
Q gi|254780791|r  488 NFFDGQANAIVINKAPP  504 (529)
Q Consensus       488 ~l~DG~v~a~V~~k~~~  504 (529)
T Consensus       426 ~~~DG~i~a~V~~i~~~  442 (443)
T PRK00286        426 RLADGEVDAEVTDVQPA  442 (443)
T ss_pred             EEECCEEEEEEEEEECC
T ss_conf             99361899999997189