HHsearch alignment for GI: 254780791 and conserved domain: PRK00286
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed.
Probab=100.00 E-value=0 Score=1023.07 Aligned_cols=438 Identities=40% Similarity=0.669 Sum_probs=416.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE
Q ss_conf 89862299999999999740017189999970543568886279998748947999997352105866814598899999
Q gi|254780791|r 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90 (529)
Q Consensus 11 ~~~~~svs~l~~~i~~~l~~~~~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g 90 (529)
T Consensus 2 ~~~~lsVsel~~~ik~~le~~~~~v~V~GEIS~~~-~~~sGH~YF~LkD~~a~i~~v~~~~~~~~l~~~~~~G~~V~v~g 80 (443)
T PRK00286 2 MDNPLSVSELNGYVKSLLERDLGQVWVRGEISNFT-RPSSGHWYFTLKDEQAQIRCVMFRGSARRLKFKPEEGMQVLVRG 80 (443)
T ss_pred CCCCEEHHHHHHHHHHHHHHHCCCEEEEEEECCCE-ECCCCEEEEEEEECCCEEEEEEECCHHHHCCCCCCCCCEEEEEE
T ss_conf 99863099999999999983489899999964666-28996499999818928999999284752899998999999999
Q ss_pred EEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf 96675288437999997101680079999999999765401226100163102652899984784258999999863059
Q gi|254780791|r 91 KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF 170 (529)
Q Consensus 91 ~~~~y~~~g~~ql~v~~i~~~g~G~l~~~~e~lk~~L~~eGlfd~~~k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~ 170 (529)
T Consensus 81 ~i~~Y~~~g~~ql~v~~i~~~g~G~L~~~~e~lk~kL~~eGlFd~~~Kk~lP~~P~~IgvITS~tgAa~~Di~~~~~~R~ 160 (443)
T PRK00286 81 KVSVYEPRGDYQLIVEDIEPAGIGALAQAFEQLKEKLAAEGLFDPERKKPLPFFPKRIGVITSPTGAAIRDILTVLSRRF 160 (443)
T ss_pred EEEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
T ss_conf 99898688618999978127792189999999999997777968777899987855799983684389999999985049
Q ss_pred C-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECC
Q ss_conf 7-589997210011110367999999997410035767775899951688844422007699999997489048852057
Q gi|254780791|r 171 P-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 (529)
Q Consensus 171 p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGH 249 (529)
T Consensus 161 p~~~i~l~p~~VQG~~A~~~I~~ai~~~~~~~------~~DvIIi~RGGGS~eDL~~FNdE~varaI~~s~iPVISaIGH 234 (443)
T PRK00286 161 PSVEVIIYPTLVQGEGAAASIVEAIERANARG------EVDVLIVARGGGSLEDLWAFNDEAVARAIAASKIPVISAVGH 234 (443)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHC------CCCEEEEECCCCCHHHHHHCCCHHHHHHHHHCCCCEEECCCC
T ss_conf 96599998145626547999999999985224------888899936878888976518799999998489978951466
Q ss_pred CCCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHH
Q ss_conf 775258988641237772145676332346777669999988877899888999985567765304--978898678887
Q gi|254780791|r 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYR 327 (529)
Q Consensus 250 E~D~Tl~D~VAD~Ra~TPTaAAElavp~~~EL~~~L~~l~~RL~~a~~~~l~~~~q~L~~l~r~L~--~~~~~L~~~~Qr 327 (529)
T Consensus 235 E~D~Ti~D~VAD~Ra~TPTaAAe~~~p~~~e~~~~l~~~~~~l~~~~~~~l~~~~~~L~~l~~~l~~~~p~~~l~~~~~~ 314 (443)
T PRK00286 235 ETDFTIADFVADLRAPTPTAAAELVVPDQAELLQRLQQLRQRLARALRRYLKQKEQRLDQLAHRLKFQSPQRRLDQQQQR 314 (443)
T ss_pred CCCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 77755888865403799699999865319999999999999999999999999999999999654236999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88865456899999987568899999841011346889999999999999999988765556788887767777788750
Q gi|254780791|r 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407 (529)
Q Consensus 328 Ld~~~~rL~~~l~~~l~~~~~~l~~~~~rL~~~~~~~~l~~~r~~L~~~q~~L~q~~~~~l~~~~~~~~~~~~~l~~l~~ 407 (529)
T Consensus 315 l~~~~~~L~~~~~~~l~~~~~~l~~l~~~L~~------------------------------------------------ 346 (443)
T PRK00286 315 LDELRQRLRRALRRQLRQARQRLERLSQRLQN------------------------------------------------ 346 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------------------------------------------
T ss_conf 99999999999999999999999999987538------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCEECCHHHCCCCCEEEE
Q ss_conf 26889999999999999999999999999999999999998871696777314619998489889577789299986999
Q gi|254780791|r 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 (529)
Q Consensus 408 ~~~~~l~~~~~~l~~l~~rL~~~~~~~L~~~~~rL~~l~~~L~slsP~~~L~RGYaiv~~~~GkiI~s~~~l~~gd~i~i 487 (529)
T Consensus 347 -~~~~i~~~~~~l~~~~~~l~~~~~~~l~~~~~~l~~~~~~L~~lsP~~~L~RGYaiv~~~~gkiI~s~~~l~~gd~i~i 425 (443)
T PRK00286 347 -PQPRIARAQQRLEQLANRLLQAMQRRLKRKRQRLEALAQQLEALSPLATLARGYAIVRDEDGKVIRSAKQLKPGDRLTI 425 (443)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCEECCHHHCCCCCEEEE
T ss_conf -6778999999999999999999999999999999999999995895788749559999299999748899799898999
Q ss_pred EEECEEEEEEEEECCCC
Q ss_conf 99110999999505788
Q gi|254780791|r 488 NFFDGQANAIVINKAPP 504 (529)
Q Consensus 488 ~l~DG~v~a~V~~k~~~ 504 (529)
T Consensus 426 ~~~DG~i~a~V~~i~~~ 442 (443)
T PRK00286 426 RLADGEVDAEVTDVQPA 442 (443)
T ss_pred EEECCEEEEEEEEEECC
T ss_conf 99361899999997189