HHsearch alignment for GI: 254780791 and conserved domain: PRK00286
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed.
Probab=96.98 E-value=0.068 Score=37.06 Aligned_cols=224 Identities=18% Similarity=0.233 Sum_probs=133.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE---EECCCCCHHHHHHCCHHHHHHHHHHCC---CE--EEEEECC--C-
Q ss_conf 11110367999999997410035767775899---951688844422007699999997489---04--8852057--7-
Q gi|254780791|r 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIII---LARGGGSIEDLWHFNDEMIVRAIANSS---IP--IISAIGH--E- 250 (529)
Q Consensus 182 QG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii---i~RGGGS~eDL~~FN~e~laraI~~~~---iP--VisgIGH--E- 250 (529)
T Consensus 144 ~tgAa~~Di~~~~~~---R~-----p~~~i~l~p~~VQG~~A~~--------~I~~ai~~~~~~~~~DvIIi~RGGGS~e 207 (443)
T PRK00286 144 PTGAAIRDILTVLSR---RF-----PSVEVIIYPTLVQGEGAAA--------SIVEAIERANARGEVDVLIVARGGGSLE 207 (443)
T ss_pred CCHHHHHHHHHHHHC---CC-----CCEEEEEEECCCCHHHHHH--------HHHHHHHHHHHHCCCCEEEEECCCCCHH
T ss_conf 843899999999850---49-----9659999814562654799--------9999999985224888899936878888
Q ss_pred -----CCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf -----752589886412377721456763323467776699999888778998889999855677653049788986788
Q gi|254780791|r 251 -----TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325 (529)
Q Consensus 251 -----~D~Tl~D~VAD~Ra~TPTaAAElavp~~~EL~~~L~~l~~RL~~a~~~~l~~~~q~L~~l~r~L~~~~~~L~~~~ 325 (529)
T Consensus 208 DL~~FNdE~varaI~~s~iPVISaIG-------HE~D~Ti~D~VAD~Ra~TPTaAA---------e--~--~~p~~~e~~ 267 (443)
T PRK00286 208 DLWAFNDEAVARAIAASKIPVISAVG-------HETDFTIADFVADLRAPTPTAAA---------E--L--VVPDQAELL 267 (443)
T ss_pred HHHHCCCHHHHHHHHHCCCCEEECCC-------CCCCCCHHHHHHHCCCCCHHHHH---------H--H--HCCCHHHHH
T ss_conf 97651879999999848997895146-------67775588886540379969999---------9--8--653199999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87888654568999999875688999998410113468899999999999999999887655567888877677777887
Q gi|254780791|r 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 (529)
Q Consensus 326 QrLd~~~~rL~~~l~~~l~~~~~~l~~~~~rL~~~~~~~~l~~~r~~L~~~q~~L~q~~~~~l~~~~~~~~~~~~~l~~l 405 (529)
T Consensus 268 ~~l~~~~~~l~~~~~~~l~~~~~~L~~l~~~l~~~~p~~~l~~~~~~l~~~~~~L~~~~~~~l~~~~~~l---------- 337 (443)
T PRK00286 268 QRLQQLRQRLARALRRYLKQKEQRLDQLAHRLKFQSPQRRLDQQQQRLDELRQRLRRALRRQLRQARQRL---------- 337 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
T ss_conf 9999999999999999999999999999965423699999999999999999999999999999999999----------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 50268899999999999999999999999999999999999988716
Q gi|254780791|r 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 (529)
Q Consensus 406 ~~~~~~~l~~~~~~l~~l~~rL~~~~~~~L~~~~~rL~~l~~~L~sl 452 (529)
T Consensus 338 -~~l~~~L~~~~~~i~~~~~~l~~~~~~l~~~~~~~l~~~~~~l~~~ 383 (443)
T PRK00286 338 -ERLSQRLQNPQPRIARAQQRLEQLANRLLQAMQRRLKRKRQRLEAL 383 (443)
T ss_pred -HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -9999875386778999999999999999999999999999999999