HHsearch alignment for GI: 254780791 and conserved domain: PRK06143

Probab=90.86  E-value=0.93  Score=26.92  Aligned_cols=78  Identities=18%  Similarity=0.254  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCEEEEE-CCC------CCHHHHHHCCH----------HHHHHHHHHCCCEEEEEE-
Q ss_conf             036799999999741003576777589995-168------88444220076----------999999974890488520-
Q gi|254780791|r  186 CPKEIANAILQLNTLKEGRTCPRPDIIILA-RGG------GSIEDLWHFND----------EMIVRAIANSSIPIISAI-  247 (529)
Q Consensus       186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~-RGG------GS~eDL~~FN~----------e~laraI~~~~iPVisgI-  247 (529)
T Consensus        37 m~~eL~~~~~~~~~d~------~vrvvVltg~G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~  110 (260)
T PRK06143         37 VILALTQALRWLAADP------DVRVLVLRGAGEKAFIGGADIKEMATLDQASAEAFISRLRDLCDAVRHFPVPVIARIP  110 (260)
T ss_pred             HHHHHHHHHHHHHHCC------CCEEEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             9999999999885389------9559999658877634885679886159656899999999999999948998899987


Q ss_pred             CCCCCC-HHHHHHHCCCCCCCHH
Q ss_conf             577752-5898864123777214
Q gi|254780791|r  248 GHETDW-TLADYAADLRAPTPTG  269 (529)
Q Consensus       248 GHE~D~-Tl~D~VAD~Ra~TPTa  269 (529)
T Consensus       111 G~a~GgG~~lal~cD~~ias~~a  133 (260)
T PRK06143        111 GWCLGGGLELAAACDLRIAAHDA  133 (260)
T ss_pred             CEEECCCHHHHHCCCEEEECCCC
T ss_conf             96110425766447765322365