HHsearch alignment for GI: 254780791 and conserved domain: PRK07373
>PRK07373 DNA polymerase III subunit alpha; Reviewed.
Probab=96.02 E-value=0.04 Score=39.13 Aligned_cols=76 Identities=22% Similarity=0.424 Sum_probs=64.1
Q ss_pred CEEEEEEECCCCCC-CCCCE--EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEE
Q ss_conf 18999997054356-88862--7999874894799999735210586681459889999996675288437999997101
Q gi|254780791|r 34 HVCVRGEISGYRGI-HSSGH--AYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110 (529)
Q Consensus 34 ~~~v~gEis~~~~~-~~sGH--~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i~~ 110 (529)
T Consensus 280 ~V~~~g~I~~vr~~~TKkG~~MAfvtLeD~tG~iEvvvFpe~ye~~~~~L~~d~ivlv~Gkv~~r--d~~~~liv~~i~~ 357 (447)
T PRK07373 280 KVSAVVMLNGVKKIVTKKGDPMAFLQLEDLSGQSEAVVFPKSYERIQELLQEDSRLIIWGKVDRR--DDQVQLIVEDAEP 357 (447)
T ss_pred EEEEEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEEEEEE--CCCEEEEEEECCC
T ss_conf 89999999999998704896599999997897489998089999998873379989999999987--8937899800355
Q ss_pred C
Q ss_conf 6
Q gi|254780791|r 111 S 111 (529)
Q Consensus 111 ~ 111 (529)
T Consensus 358 l 358 (447)
T PRK07373 358 I 358 (447)
T ss_pred H
T ss_conf 8