HHsearch alignment for GI: 254780791 and conserved domain: cd04496
>cd04496 SSB_OBF SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart
Probab=92.90 E-value=0.95 Score=26.85 Aligned_cols=49 Identities=8% Similarity=0.137 Sum_probs=38.6
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCEEEEEEEEE--EECC-----CCEEEEEEEEEEE
Q ss_conf 47999997352105866814598899999966--7528-----8437999997101
Q gi|254780791|r 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKIT--TFPG-----SSKYQIIIESLIP 110 (529)
Q Consensus 62 a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~--~y~~-----~g~~ql~v~~i~~ 110 (529)
T Consensus 44 ~~~~v~~wg~~A~~~~~~l~KG~~V~V~G~l~~~~~~~~~g~~~~~~~i~a~~i~~ 99 (100)
T cd04496 44 DWIRVVAFGKLAENAAKYLKKGDLVYVEGRLRTRSWEDKDGQKRYGTEVVADRIEF 99 (100)
T ss_pred EEEEEEEECHHHHHHHHHCCCCCEEEEEEEEECCEEECCCCCEEEEEEEEEEEEEE
T ss_conf 99999999708987787537998899999988123799999899999999999994