HHsearch alignment for GI: 254780791 and conserved domain: pfam03808

Probab=93.30  E-value=0.62  Score=28.50  Aligned_cols=93  Identities=20%  Similarity=0.310  Sum_probs=66.9

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHH
Q ss_conf             6528999847842589999998630597-589997210011110367999999997410035767775899951688844
Q gi|254780791|r  144 IPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE  222 (529)
Q Consensus       144 ~p~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~e  222 (529)
T Consensus        47 ~~~~v~llG~~~~~-~~~~~~~l~~~yP~l~i~g~~~g~f~~~e~~~i~~~I~~~----------~~div~vglG~PkQE  115 (172)
T pfam03808        47 RGKRVFLLGGKPGV-LEKAAARLRARYPGLRIVGTHDGYFSPEEEEAIIEAINAS----------GPDLLFVGLGAPKQE  115 (172)
T ss_pred             CCCEEEEEECCHHH-HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHC----------CCCEEEEECCCCHHH
T ss_conf             49838998088899-9999999998879955999879999868999999999845----------999999956981779


Q ss_pred             HHHHCCHHHHHHHHHHCCCEEEEEECCCCCCH
Q ss_conf             42200769999999748904885205777525
Q gi|254780791|r  223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWT  254 (529)
Q Consensus       223 DL~~FN~e~laraI~~~~iPVisgIGHE~D~T  254 (529)
T Consensus       116 ~~~~~~~~~-------~~~~v~~~vGa~~d~~  140 (172)
T pfam03808       116 KWIARNRAR-------LPVPVFIGVGGSFDFL  140 (172)
T ss_pred             HHHHHHHHH-------CCCCEEEECCCHHHHH
T ss_conf             999999987-------7998798524012466