HHsearch alignment of GI: 254780791 and MMDB domain: 1vlj_A_1-193
>1vlj_A (A:1-193) NADH-dependent butanol dehydrogenase; TM0820, structural genomics, JCSG, protein structure initiative, PSI; HET: NAP; 1.78A {Thermotoga maritima MSB8}
Probab=92.43 E-value=0.35 Score=30.12 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=50.8
Q ss_pred CCCEEEEEECCCHHHH----HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
Q ss_conf 6528999847842589----999998630597589997210011110367999999997410035767775899951688
Q gi|254780791|r 144 IPKIIAVITSPTGAVI----RDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219 (529)
Q Consensus 144 ~p~~i~vits~~~a~~----~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG 219 (529)
-++++.|||+...... ..+...+.+.. ..+.+| .-+-|+-...++.++++.+.... +| .||+=|||
T Consensus 42 g~~~vlivtd~~~~~~~~~~~~~~~~l~~~~-~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~-------~D-~IIaiGGG 111 (193)
T 1vlj_A 42 GIRKVLFLYGGGSIKKNGVYDQVVDSLKKHG-IEWVEV-SGVKPNPVLSKVHEAVEVAKKEK-------VE-AVLGVGGG 111 (193)
T ss_dssp TCCEEEEEECSSHHHHSSHHHHHHHHHHHTT-CEEEEE-CCCCSSCBHHHHHHHHHHHHHTT-------CS-EEEEEESH
T ss_pred CCCEEEEEECCCHHHHCCHHHHHHHHHHHCC-CEEEEE-CCCCCCCCHHHHHHHHHHHHCCC-------CC-EEEECCCC
T ss_conf 9985899988757887629999999998659-919998-67169999999999999861358-------87-57523886
Q ss_pred CHHHHHHCCHHHHHHHHHH
Q ss_conf 8444220076999999974
Q gi|254780791|r 220 SIEDLWHFNDEMIVRAIAN 238 (529)
Q Consensus 220 S~eDL~~FN~e~laraI~~ 238 (529)
|.-|. |++++.
T Consensus 112 s~~D~--------aK~~a~ 122 (193)
T 1vlj_A 112 SVVDS--------AKAVAA 122 (193)
T ss_dssp HHHHH--------HHHHHH
T ss_pred CHHHH--------HHHHHH
T ss_conf 31146--------788899