HHsearch alignment of GI: 254780791 and MMDB domain: 2kbn_A_
>2kbn_A (A:) Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A
Probab=96.08 E-value=0.089 Score=35.43 Aligned_cols=75 Identities=16% Similarity=0.231 Sum_probs=56.0
Q ss_pred CCCCEEEEEEECCCCCCCCCCEEEEE--EECCCCEEEEEEECCCCCCCCCCCCCCCEEEEE-EEEEEECCCCEEEEEEEE
Q ss_conf 01718999997054356888627999--874894799999735210586681459889999-996675288437999997
Q gi|254780791|r 31 NLSHVCVRGEISGYRGIHSSGHAYFS--LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI-GKITTFPGSSKYQIIIES 107 (529)
Q Consensus 31 ~~~~~~v~gEis~~~~~~~sGH~Yf~--lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~-g~~~~y~~~g~~ql~v~~ 107 (529)
...++-|+|-|.... ...+++.+|+ |.|+.+.|++++|.-.+ .-.++.|+-|.+. |.++.| +|.++|.+..
T Consensus 14 ~~~~v~i~~~V~~~~-~~~~~~~~~~~~l~DetG~I~~t~W~d~~---~~~i~~G~~v~i~~~~v~~~--~g~~el~~~~ 87 (109)
T 2kbn_A 14 NGQWANLKAKVIQLW-ENTHESISQVGLLGDETGIIKFTIWKNAE---LPLLEQGESYLLRSVVVGEY--NDRFQVQVNK 87 (109)
T ss_dssp TTCEEEEEEEEEEEE-ECCCSSEEEEEEEECTTCCEEEEEEGGGC---CCCCCTTCEEEEEEEEEEEE--TTEEEEEECS
T ss_pred CCCCEEEEEEEEEEE-CCCCCEEEEEEEEECCCCEEEEEEECCCC---CCCCCCCCEEEEEEEEEEEE--CCEEEEEECC
T ss_conf 998289999999974-79995299999998898759999967756---65467898999940799477--8827999899
Q ss_pred ---EEEC
Q ss_conf ---1016
Q gi|254780791|r 108 ---LIPS 111 (529)
Q Consensus 108 ---i~~~ 111 (529)
|++.
T Consensus 88 ~~~i~~~ 94 (109)
T 2kbn_A 88 NSSIEKL 94 (109)
T ss_dssp SSEEEEC
T ss_pred CCEEEEC
T ss_conf 8479988