HHsearch alignment of GI: 254780791 and MMDB domain: 3fhw_A_
>3fhw_A (A:) Primosomal replication protein N; PRIB BPR162 X-RAY NESG, structural genomics, PSI-2, protein structure initiative; 1.90A {Bordetella parapertussis} PDB: 3dm4_A 3klw_A
Probab=93.79 E-value=0.45 Score=29.15 Aligned_cols=76 Identities=14% Similarity=0.099 Sum_probs=53.3
Q ss_pred CEEEEEEECC---CCCCCCCCEEE--EEE------ECC------CCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 1899999705---43568886279--998------748------947999997352105866814598899999966752
Q gi|254780791|r 34 HVCVRGEISG---YRGIHSSGHAY--FSL------KDN------HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFP 96 (529)
Q Consensus 34 ~~~v~gEis~---~~~~~~sGH~Y--f~l------kd~------~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~ 96 (529)
.|-+.|-|.. ++. -.+|..| |+| +|. ..-++|++|...+..+.. ++-|+.|+|.|++....
T Consensus 3 ~v~l~G~i~~dp~~~~-t~~G~~~~~f~la~~~~~~~~~~~~~~t~~~~v~~~g~~A~~~~~-l~kG~~V~V~G~l~~~~ 80 (115)
T 3fhw_A 3 TLELSARVLECGAXRH-TPAGLPALELLLVHESEVVEAGHPRRVELTISAVALGDLALLLAD-TPLGTEXQVQGFLAPAR 80 (115)
T ss_dssp EEEEEEEEEEECCCEE-CTTSCEEEEEEEEEEEECCCCC--CEEEEEEEEEEETHHHHHHTT-CCTTCEEEEEEEEEESS
T ss_pred EEEEEEEECCCCCEEE-CCCCCEEEEEEEEECCEEECCCCCCCEEEEEEEEEEHHHHHHHHH-CCCCCEEEEEEEECCCC
T ss_conf 8999999876863889-899977899999932012048873534499999999488232041-37999999999965266
Q ss_pred C-CCEEEEEEEEEEEC
Q ss_conf 8-84379999971016
Q gi|254780791|r 97 G-SSKYQIIIESLIPS 111 (529)
Q Consensus 97 ~-~g~~ql~v~~i~~~ 111 (529)
- ....++.++.|+.-
T Consensus 81 ~~~~~g~i~~~~i~~l 96 (115)
T 3fhw_A 81 KDSVKVKLHLQQARRI 96 (115)
T ss_dssp TTCSSEEEEEEEEEEC
T ss_pred CCCCCEEEEEEEEEEE
T ss_conf 8898369998999992