HHsearch results for GI: 254780791 and protein with PDBid: 1gm5_A

>1gm5_A RECG; helicase, replication restart; HET: DNA ADP; 3.24A {Thermotoga maritima} SCOP: a.24.21.1 b.40.4.9 c.37.1.19 c.37.1.19

Probab=90.98  E-value=0.22  Score=30.62  Aligned_cols=75  Identities=15%  Similarity=0.164  Sum_probs=47.2

Q ss_pred             CEEEEEEECCCCCCC-CCCE-EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEE
Q ss_conf             189999970543568-8862-79998748947999997352105866814598899999966752884379999971
Q gi|254780791|r   34 HVCVRGEISGYRGIH-SSGH-AYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESL  108 (529)
Q Consensus        34 ~~~v~gEis~~~~~~-~sGH-~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i  108 (529)
                      .+.+.|+|.+..... ++.. +.+.+.|+.+.|.|++|...+..-.++-..|..|++.|++....-+|.+|+.--++
T Consensus       167 ~~ti~g~I~~~~~~~~~~~~~~~~~~~D~tg~i~l~fFn~~~~~~~lk~~~G~~v~v~Gkvk~~~~~~~~qi~~pe~  243 (780)
T 1gm5_A          167 KVTTQGKIVSVETKKFQNMNILTAVLSDGLVHVPLKWFNQDYLQTYLKQLTGKEVFVTGTVKSNAYTGQYEIHNAEV  243 (780)
T ss_dssp             CCEEEECCCCCEEEECSSCEEEEEEECCSSCCEEEEECSCCTTHHHHHTTCSSCEEEEEEECSCCTTSSCCEEEEEE
T ss_pred             EEEEEEEEEEEECCCCCCCEEEEEEEEECCEEEEEEEECCHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEECCCEE
T ss_conf             69999999985456689973699999989889999995968999866345899899999999758576699439743