HHsearch results for GI: 254780791 and protein with PDBid: 1o7i_A
>1o7i_A SSB, SSO2364, single stranded DNA binding protein; OB fold; 1.2A {Sulfolobus solfataricus} SCOP: b.40.4.3
Probab=90.42 E-value=1.1 Score=24.45 Aligned_cols=77 Identities=13% Similarity=0.136 Sum_probs=51.5
Q ss_pred CCCEEEEEEECCCC------CCCCCCEE-EEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEE-EEEEEECCCCEEEE
Q ss_conf 17189999970543------56888627-999874894799999735210586681459889999-99667528843799
Q gi|254780791|r 32 LSHVCVRGEISGYR------GIHSSGHA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI-GKITTFPGSSKYQI 103 (529)
Q Consensus 32 ~~~~~v~gEis~~~------~~~~sGH~-Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~-g~~~~y~~~g~~ql 103 (529)
..++-|.|-|.+.. ....+|-+ .+.+.|+.+.|++++|...+. .++.|+-|.+. |++..| +|.++|
T Consensus 12 ~~~v~i~~~V~~~~~~r~~~~k~g~~~v~~~~i~D~TG~i~~tlW~~~~~----~i~~Gd~v~i~~~~v~~~--~g~~~l 85 (119)
T 1o7i_A 12 MESVNVTVRVLEASEARQIQTKNGVRTISEAIVGDETGRVKLTLWGKHAG----SIKEGQVVKIENAWTTAF--KGQVQL 85 (119)
T ss_dssp CSSEEEEEEEEEECCCEEECCTTCCEEEEEEEEEETTEEEEEEEEGGGTT----CCCTTCEEEEEEEEEEEE--TTEEEE
T ss_pred CCCEEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCCEEEEEEECCCCC----CCCCCCEEEEEEEEEEEE--CCEEEE
T ss_conf 98789999999887871687389988999999986998799988057534----489999999945599997--997999
Q ss_pred EEE---EEEECCCC
Q ss_conf 999---71016800
Q gi|254780791|r 104 IIE---SLIPSGSG 114 (529)
Q Consensus 104 ~v~---~i~~~g~G 114 (529)
.+. .|.+.+.+
T Consensus 86 ~~~~~~~i~~~~d~ 99 (119)
T 1o7i_A 86 NAGSKTKIAEASED 99 (119)
T ss_dssp EECTTCEEEECCCT
T ss_pred EECCCEEEEECCCC
T ss_conf 98998699998866