HHsearch results for GI: 254780791 and protein with PDBid: 1vlj_A
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural genomics, JCSG, protein structure initiative, PSI; HET: NAP; 1.78A {Thermotoga maritima MSB8} SCOP: e.22.1.2
Probab=95.57 E-value=0.096 Score=33.77 Aligned_cols=74 Identities=16% Similarity=0.262 Sum_probs=51.5
Q ss_pred CEEEEEECCCHH----HHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
Q ss_conf 289998478425----8999999863059758999721001111036799999999741003576777589995168884
Q gi|254780791|r 146 KIIAVITSPTGA----VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 (529)
Q Consensus 146 ~~i~vits~~~a----~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~ 221 (529)
+|+.|||++++. .+..+...|.+ ..+++.+| .-|.++-....|.++.+.+...+ +| +||+=||||.
T Consensus 44 kkvliVt~~~~~~~~g~~~~v~~~L~~-~gi~~~~f-~~v~~~pt~~~v~~~~~~~~~~~-------~D-~IIavGGGS~ 113 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKNGVYDQVVDSLKK-HGIEWVEV-SGVKPNPVLSKVHEAVEVAKKEK-------VE-AVLGVGGGSV 113 (407)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHH-TTCEEEEE-CCCCSSCBHHHHHHHHHHHHHTT-------CS-EEEEEESHHH
T ss_pred CEEEEEECCCHHHHCCHHHHHHHHHHH-CCCEEEEE-CCCCCCCCHHHHHHHHHHHHHCC-------CC-EEEECCCCCH
T ss_conf 858999887578875299999999986-59939998-57079999999999999997459-------97-8995499634
Q ss_pred HHHHHCCHHHHHHHHH
Q ss_conf 4422007699999997
Q gi|254780791|r 222 EDLWHFNDEMIVRAIA 237 (529)
Q Consensus 222 eDL~~FN~e~laraI~ 237 (529)
-|. |++|+
T Consensus 114 iD~--------AKaia 121 (407)
T 1vlj_A 114 VDS--------AKAVA 121 (407)
T ss_dssp HHH--------HHHHH
T ss_pred HHH--------HHHHH
T ss_conf 156--------88899