HHsearch results for GI: 254780791 and protein with PDBid: 3e0e_A
>3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=94.15 E-value=0.41 Score=28.12 Aligned_cols=71 Identities=18% Similarity=0.235 Sum_probs=49.9
Q ss_pred CEEEEEEECCCCC-----CC--CCCEEE-EEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEE
Q ss_conf 1899999705435-----68--886279-998748947999997352105866814598899999966752884379999
Q gi|254780791|r 34 HVCVRGEISGYRG-----IH--SSGHAY-FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105 (529)
Q Consensus 34 ~~~v~gEis~~~~-----~~--~sGH~Y-f~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v 105 (529)
++-|.|.|..... +. +.|.++ +.+.|+.+.|++++|... ..+.++.|+-|.+.|.+..| +|+++|.+
T Consensus 13 ~v~i~g~V~~~~~~r~~~~k~g~~~~v~~~~i~D~TG~i~~~~W~~~---~~~~~~~g~~v~v~g~v~~~--~~~~el~~ 87 (97)
T 3e0e_A 13 SGTINAEVVTAYPKKEFSRKDGTKGQLKSLFLKDDTGSIRGTLWNEL---ADFEVKKGDIAEVSGYVKQG--YSGLEISV 87 (97)
T ss_dssp EEEEEEEEEEECCCEEEC----CCEEEEEEEEEETTEEEEEEEEGGG---GGCCCCTTCEEEEEEEEEEC----CEEEEE
T ss_pred EEEEEEEEEECCCCEEEECCCCCEEEEEEEEEECCCCCEEEEEECHH---HHHCCCCCCEEEEEEEEEEC--CCEEEEEE
T ss_conf 38899999981475798847997308999999849980999996845---73162689799999999964--98289994
Q ss_pred EEEE
Q ss_conf 9710
Q gi|254780791|r 106 ESLI 109 (529)
Q Consensus 106 ~~i~ 109 (529)
....
T Consensus 88 ~~~~ 91 (97)
T 3e0e_A 88 DNIG 91 (97)
T ss_dssp EEEE
T ss_pred CCCE
T ss_conf 9951