HHsearch results for GI: 254780791 and protein with PDBid: 3f2b_A
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=94.83 E-value=0.28 Score=29.56 Aligned_cols=78 Identities=18% Similarity=0.137 Sum_probs=57.6
Q ss_pred CCCEEEEEEECCCCCC-CCCC-EEE-EEEECCCCEEEEEEECCCCCCCC--CCCCCCCEEEEEEEEEEECC-CCEEEEEE
Q ss_conf 1718999997054356-8886-279-99874894799999735210586--68145988999999667528-84379999
Q gi|254780791|r 32 LSHVCVRGEISGYRGI-HSSG-HAY-FSLKDNHSRIDAIIWKGTLNKIE--FLPEEGIEFLVIGKITTFPG-SSKYQIII 105 (529)
Q Consensus 32 ~~~~~v~gEis~~~~~-~~sG-H~Y-f~lkd~~a~i~~~~~~~~~~~~~--~~~~~G~~v~~~g~~~~y~~-~g~~ql~v 105 (529)
-.+|.|+|+|-++-.+ -++| ++| |.+.|...+|.|.+|...-.... -.++.|+-|.+.|++. |.. .+.+.+.+
T Consensus 17 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~ 95 (1041)
T 3f2b_A 17 ERRVVVQGYVFDAEVSELKSGRTLLTMKITDYTNSILVKMFSRDKEDAELMSGVKKGMWVKVRGSVQ-NDTFVRDLVIIA 95 (1041)
T ss_dssp EEEEEEEEEEEEEEEEECTTSCEEEEEEEECSSCEEEEEEECSSHHHHHHHHTCCTTCEEEEEEEEE-EETTTTEEEEEE
T ss_pred CCEEEEEEEEEEEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCEEEEEEEEE-CCCCCCCEEEEE
T ss_conf 6669999999987768604898899999982688689999558744088984067996899999885-157777417971
Q ss_pred EEEEE
Q ss_conf 97101
Q gi|254780791|r 106 ESLIP 110 (529)
Q Consensus 106 ~~i~~ 110 (529)
..|..
T Consensus 96 ~~~~~ 100 (1041)
T 3f2b_A 96 NDLNE 100 (1041)
T ss_dssp EEEEE
T ss_pred EEEEE
T ss_conf 01365