HHSEARCH alignment of GI: 254780791 and SCOP domain: d1oj7a_

Alignment

Probab=93.73  E-value=0.065  Score=33.18  Aligned_cols=71  Identities=18%  Similarity=0.244  Sum_probs=43.6

Q ss_pred             CEEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
Q ss_conf             2899984784258999999863059-758999721001111036799999999741003576777589995168884442
Q gi|254780791|r  146 KIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL  224 (529)
Q Consensus       146 ~~i~vits~~~a~~~D~~~~~~~r~-p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL  224 (529)
                      +|+.|||++.+..--.++..+.... ..++.+|. -|.++-....+.++.+.+...+       +| .||+=||||.-|.
T Consensus        33 ~~vliV~~~~~~~~~g~~~~v~~~L~~~~~~~f~-~v~~~p~~~~v~~~~~~~~~~~-------~D-~IIavGGGs~iD~  103 (390)
T d1oj7a_          33 ARVLITYGGGSVKKTGVLDQVLDALKGMDVLEFG-GIEPNPAYETLMNAVKLVREQK-------VT-FLLAVGGGSVLDG  103 (390)
T ss_dssp             CEEEEEECSSHHHHHSHHHHHHHHTTTSEEEEEC-CCCSSCBHHHHHHHHHHHHHHT-------CC-EEEEEESHHHHHH
T ss_pred             CCEEEEECCCHHHHCCHHHHHHHHCCCCCEEEEE-CCCCCCCHHHHHHHHHHHHHCC-------CC-EEEECCCCCCCCH
T ss_conf             9889998971687743999999971899479992-8237999999999999976337-------87-7985478854408


Q ss_pred             H
Q ss_conf             2
Q gi|254780791|r  225 W  225 (529)
Q Consensus       225 ~  225 (529)
                      .
T Consensus       104 a  104 (390)
T d1oj7a_         104 T  104 (390)
T ss_dssp             H
T ss_pred             H
T ss_conf             9

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: Dehydroquinate synthase-like
superfamily: Dehydroquinate synthase-like
family: Iron-containing alcohol dehydrogenase
domain: Hypothetical oxidoreductase yqhD
species: Escherichia coli [TaxId: 562]